View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7630_high_11 (Length: 235)
Name: NF7630_high_11
Description: NF7630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7630_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 9300089 - 9300260
Alignment:
| Q |
39 |
ctgctagggattaccctctaatcactagtctagccaaaaa-attattttggcgcatcaccgaccacccgcaccaaattattattgaactaacttccaacc |
137 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9300089 |
ctgctagggattaccctctaatcactagtctagccaaaaatattattttggcgcatcaccgaccacccgcaccaaattattattgaactaacttccaacc |
9300188 |
T |
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| Q |
138 |
ccaaatttccagcccagatagtagtggctcatcctcttcaattgattcatcctctcatattcctatcaatgc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9300189 |
ccaaatttccagcccagatagtagtggctcatcctcttcaattgattcatcctctcatattcctatcaatgc |
9300260 |
T |
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