View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_high_22 (Length: 426)
Name: NF7636_high_22
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 333; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 70 - 410
Target Start/End: Original strand, 2782576 - 2782916
Alignment:
| Q |
70 |
agaaaatcaagtggttccatggaaatctacaactccaccaccagtttcttcttgttcttcaaatagtgcaaactaatgctaccaactagtataaatatat |
169 |
Q |
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| T |
2782576 |
agaaaatcaagtggttccatggaaatctacaactccaccaccagtttcttcttgttcttcaaatagtgcaaactaatgctaccaactagtataaatatat |
2782675 |
T |
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| Q |
170 |
atcctgtaatttttcttcctctcttcatttttcttgtgtgctaaattaatttgaggatttttgttttagattcatagattggtaagtaacaaaattagtt |
269 |
Q |
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| T |
2782676 |
ttcctgtaatttttcttcctctcttcatttttcttgtgtgctaaattaatttgaggatttttgttttagattcatagattggtaagtaacaaaattagtt |
2782775 |
T |
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| Q |
270 |
tctagtttatgtgctgtaataatcaatatatccactctctcttgtagtaaatgctttcattcatacattggtgtttttcatttccttcttcatgtgaaat |
369 |
Q |
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| T |
2782776 |
tctagtttatgtgatgtaataatcaatatatccactctctcttgtagtaaatgctttcattcatacattggtgtttttcatttccttcttcatgtgaaat |
2782875 |
T |
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| Q |
370 |
aatctagttaatatgtatgtgctttgttacatgcaccttag |
410 |
Q |
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| T |
2782876 |
aatctagttaatatgtatgtgctttgttacatgcaccttag |
2782916 |
T |
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