View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_high_31 (Length: 390)

Name: NF7636_high_31
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_high_31
NF7636_high_31
[»] chr6 (30 HSPs)
chr6 (18-376)||(5429596-5429954)
chr6 (18-221)||(5366503-5366706)
chr6 (29-231)||(5358028-5358230)
chr6 (18-226)||(5422200-5422408)
chr6 (18-221)||(5070321-5070524)
chr6 (20-233)||(5092934-5093147)
chr6 (18-208)||(5077000-5077190)
chr6 (20-233)||(5160390-5160603)
chr6 (18-218)||(5174140-5174340)
chr6 (71-233)||(5149594-5149756)
chr6 (19-218)||(5380365-5380563)
chr6 (17-219)||(5184762-5184964)
chr6 (34-198)||(5107707-5107871)
chr6 (155-226)||(5139448-5139519)
chr6 (65-111)||(5105510-5105556)
chr6 (18-171)||(5394341-5394494)
chr6 (89-218)||(5692830-5692959)
chr6 (334-386)||(33858287-33858339)
chr6 (335-386)||(17438429-17438480)
chr6 (332-386)||(4606009-4606063)
chr6 (258-300)||(5174371-5174413)
chr6 (258-324)||(5276186-5276252)
chr6 (258-324)||(5380597-5380663)
chr6 (334-376)||(9372977-9373019)
chr6 (332-361)||(211616-211645)
chr6 (263-324)||(5184666-5184727)
chr6 (89-218)||(5275957-5276086)
chr6 (258-327)||(5692730-5692799)
chr6 (275-323)||(5394589-5394637)
chr6 (326-386)||(26682674-26682734)
[»] chr8 (7 HSPs)
chr8 (328-386)||(42641367-42641425)
chr8 (332-386)||(4053118-4053172)
chr8 (332-386)||(9135309-9135363)
chr8 (332-386)||(11602960-11603014)
chr8 (332-377)||(42788105-42788150)
chr8 (334-386)||(37938886-37938938)
chr8 (334-386)||(42309443-42309495)
[»] chr3 (18 HSPs)
chr3 (332-386)||(31311341-31311395)
chr3 (332-386)||(37169646-37169700)
chr3 (333-386)||(23551101-23551154)
chr3 (334-381)||(4229320-4229367)
chr3 (332-386)||(38472198-38472252)
chr3 (333-386)||(16202381-16202434)
chr3 (329-386)||(46888213-46888270)
chr3 (332-381)||(52587073-52587122)
chr3 (334-386)||(19841817-19841869)
chr3 (334-386)||(29458353-29458405)
chr3 (334-386)||(33098330-33098382)
chr3 (332-376)||(42628773-42628817)
chr3 (334-386)||(42737897-42737949)
chr3 (335-387)||(43140524-43140576)
chr3 (104-232)||(48016016-48016144)
chr3 (334-386)||(49408421-49408473)
chr3 (334-386)||(51419541-51419593)
chr3 (334-386)||(55378742-55378794)
[»] chr4 (11 HSPs)
chr4 (332-381)||(44917476-44917525)
chr4 (336-386)||(26488239-26488289)
chr4 (332-386)||(27553013-27553067)
chr4 (332-386)||(49459112-49459166)
chr4 (263-323)||(4350449-4350509)
chr4 (334-386)||(14254393-14254445)
chr4 (334-386)||(14597160-14597212)
chr4 (334-386)||(22007964-22008016)
chr4 (334-386)||(22787223-22787275)
chr4 (333-381)||(43201458-43201506)
chr4 (334-386)||(47404904-47404956)
[»] chr7 (9 HSPs)
chr7 (334-386)||(36309274-36309326)
chr7 (332-386)||(1702905-1702959)
chr7 (332-386)||(2007204-2007258)
chr7 (332-377)||(736429-736474)
chr7 (332-377)||(21973973-21974018)
chr7 (333-386)||(24406933-24406986)
chr7 (332-377)||(30256077-30256122)
chr7 (333-381)||(6395228-6395276)
chr7 (333-377)||(9327917-9327961)
[»] chr2 (8 HSPs)
chr2 (334-386)||(12612125-12612177)
chr2 (334-386)||(41245621-41245673)
chr2 (335-386)||(27251607-27251658)
chr2 (326-386)||(9437478-9437538)
chr2 (334-386)||(17157982-17158034)
chr2 (334-386)||(36219307-36219359)
chr2 (334-386)||(42434151-42434203)
chr2 (334-386)||(45070669-45070721)
[»] chr5 (7 HSPs)
chr5 (332-386)||(12444237-12444291)
chr5 (332-386)||(13407941-13407995)
chr5 (333-386)||(5244742-5244795)
chr5 (334-386)||(4209923-4209975)
chr5 (340-376)||(28442671-28442707)
chr5 (326-386)||(30888714-30888774)
chr5 (334-386)||(41651082-41651134)
[»] chr1 (8 HSPs)
chr1 (332-386)||(22888193-22888247)
chr1 (332-386)||(28868007-28868061)
chr1 (332-386)||(46939657-46939711)
chr1 (332-381)||(10556054-10556103)
chr1 (333-386)||(12300786-12300839)
chr1 (333-386)||(29823869-29823922)
chr1 (334-386)||(1377126-1377178)
chr1 (334-386)||(36566872-36566924)
[»] scaffold0063 (1 HSPs)
scaffold0063 (332-381)||(52107-52156)
[»] scaffold0217 (1 HSPs)
scaffold0217 (337-377)||(1410-1450)
[»] scaffold0005 (1 HSPs)
scaffold0005 (334-386)||(220166-220218)


Alignment Details
Target: chr6 (Bit Score: 347; Significance: 0; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 18 - 376
Target Start/End: Original strand, 5429596 - 5429954
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5429596 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaggagttggtgaagataatggagtgtcagag 5429695  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5429696 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaatcggtgactttggaaaagcctttcaaagtctcttg 5429795  T
Q  218 aataagatttcaaaggtggagaaggacgaagacgattcattgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaatt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5429796 aataagatttcaaaggtggagaaggacgaagacgattcattgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaatt 5429895  T
Q  318 ccaggtagttaaacttagggttaaatatattttttgtccctacaaacatacaaactttt 376  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5429896 ccaggtaattaaacttagggttaaatatattttttgtccctacaaacatacaaactttt 5429954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 5366503 - 5366706
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    ||||||||||| ||||||||||| | ||| ||||||||| |||||||||  ||||||||||||||||||| |||||| ||| |||||||||||||||||     
T  5366503 caattgaacagactcgaatttctatcatcgttttttcaaaaaattacgcccaatcgcgatggtgtcttgatgagttgttgaggataatggagtgtcagaa 5366602  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttg 217  Q
    ||| || || ||||||||||||||| |||||| |  ||||||||||||  |||| || |||||||||||||| || |||||||| ||||||| ||| |||    
T  5366603 aaccattggacaaattgttcttccagtgttcttcaatgtagatccatcggaagtccgtcatcaaaccggtgaattcggaaaagcatttcaaattcttttg 5366702  T
Q  218 aata 221  Q
    ||||    
T  5366703 aata 5366706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 29 - 231
Target Start/End: Complemental strand, 5358230 - 5358028
Alignment:
Q  29 tctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagagaactataggtc 128  Q
    |||| ||||||||||||| |||| ||||||||||| || ||||||| |||||||||||||||||||||| |||||||| ||||||  |||| |  ||| |    
T  5358230 tctcaaatttctgttatcgttttctcaacaaattatgcagaatcgcaatggtgtcttgaagagttggtggagataatgaagtgtcgcagaattcaaggcc 5358131  T
Q  129 aaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttgaataagatttc 228  Q
    || ||||| | ||| ||||||||||||||||||||||| |||||||  ||||||| ||||| || |||||||| ||||||||||| ||||| | ||||||    
T  5358130 aagttgttttgccagtgttctacggtgtagatccatctgaagtacgtaatcaaactggtgagttcggaaaagcatttcaaagtctattgaaaaggatttc 5358031  T
Q  229 aaa 231  Q
    |||    
T  5358030 aaa 5358028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 5422200 - 5422408
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    ||||||||||||||||||| ||| | ||  |||| ||||||||||||||||| || | |||||||||||| |||||| |||| |||||||||||||| ||    
T  5422200 caattgaacagtctcgaatgtctatcatagttttctcaacaaattacgcggattcacaatggtgtcttgatgagttgttgaaaataatggagtgtcacag 5422299  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttg 217  Q
    ||| || || ||||||||||| ||  |||||| ||  |||||||||||  ||||||| | |||||||||||| ||||||||||| ||||||| ||| |||    
T  5422300 aaccattggacaaattgttctgccggtgttcttcgacgtagatccatccgaagtacgtcgtcaaaccggtgaatttggaaaagcatttcaaaatcttttg 5422399  T
Q  218 aataagatt 226  Q
    |||||||||    
T  5422400 aataagatt 5422408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 5070524 - 5070321
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    ||||||||||||||||||| ||| | |||||||| || |||||||| |||||||| |||||||||||||| |||||||||||||||||||| ||| | ||    
T  5070524 caattgaacagtctcgaatgtctatcatcattttctcgacaaattatgcggaatcacgatggtgtcttgatgagttggtgaagataatggaatgtaatag 5070425  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttg 217  Q
    ||| || || ||||||||||| ||| ||||||  |  |||||||||||  |||| || |||||||||  ||| || |||||||| ||||||| ||| |||    
T  5070424 aaccattggacaaattgttctgccagtgttcttagacgtagatccatcggaagtccgtcatcaaacctctgaattcggaaaagcatttcaaattcttttg 5070325  T
Q  218 aata 221  Q
    ||||    
T  5070324 aata 5070321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 5092934 - 5093147
Alignment:
Q  20 attgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagagaa 119  Q
    |||||| |||||||||||||||| ||  ||||||||| |||||| || || |||||||||||||| || ||||| || |||||||||||||||||| |||    
T  5092934 attgaagagtctcgaatttctgtgattgttttttcaagaaattatgcagattcgcgatggtgtctagatgagttagtaaagataatggagtgtcagcgaa 5093033  T
Q  120 ctataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttgaa 219  Q
    | ||||| || || ||| | ||| ||||||||| ||||||||| ||| ||||||| || || |  || || ||||| ||||| ||||||| |||||| ||    
T  5093034 ccatagggcagatagttgtgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcgagtttggtaaagcatttcaaaatctcttaaa 5093133  T
Q  220 taagatttcaaagg 233  Q
    ||  ||||||||||    
T  5093134 tagaatttcaaagg 5093147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 5077190 - 5077000
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttga-agagttggtgaagataatggagtgtcaga 116  Q
    |||||||| ||||| |||||  | ||||  ||||||||| |||||| |||| ||||||||||||| |||| |||||||| ||| |||||||||||| | |    
T  5077190 caattgaagagtctagaattgttattatagttttttcaagaaattatgcgggatcgcgatggtgt-ttgatagagttggagaaaataatggagtgttata 5077092  T
Q  117 gaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaa 208  Q
    |||||||||| | | | ||||| ||  | || |||||||||||||||||| ||||||| |||||||| ||||| ||||||||| | ||||||    
T  5077091 gaactataggactagtggttctaccggttttttacggtgtagatccatctgaagtacgtcatcaaactggtgaatttggaaaatcgtttcaa 5077000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 5160603 - 5160390
Alignment:
Q  20 attgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagagaa 119  Q
    |||||| | |||||||||||||| ||  ||||||||| |||||| ||||| ||||||||||||||  | ||||| || ||| ||||||||||||||  ||    
T  5160603 attgaagaatctcgaatttctgtgattgttttttcaagaaattatgcggattcgcgatggtgtctaaatgagttagtaaaggtaatggagtgtcagctaa 5160504  T
Q  120 ctataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttgaa 219  Q
    | ||||| || || ||| | ||| ||||||||| ||||||||| ||| ||||||| || || |  ||  | ||||| ||||| ||||||| |||||| ||    
T  5160503 ccatagggcagatagttttgccagtgttctacgatgtagatccctctgaagtacgtcaccagaaaggcaagtttggtaaagcatttcaaaatctcttaaa 5160404  T
Q  220 taagatttcaaagg 233  Q
    ||  ||||||||||    
T  5160403 tagaatttcaaagg 5160390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 5174140 - 5174340
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    |||||||| |||||| |||||||||||||||||| |||| ||| || || || || || |||||| | || ||||||||||| |||||| | ||||  ||    
T  5174140 caattgaagagtctcaaatttctgttatcattttctcaaaaaactatgcagattcacggtggtgtttggatgagttggtgaaaataatgaaatgtcgcag 5174239  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttg 217  Q
    ||||||||| || || ||  | ||  ||||||| | ||| ||||| ||  | |||||||| ||||| ||||| ||||||||||| || ||||||||||||    
T  5174240 aactatagggcagatagtgttgccggtgttctatgatgttgatccttcggatgtacgacaccaaacaggtgagtttggaaaagcgttccaaagtctcttg 5174339  T
Q  218 a 218  Q
    |    
T  5174340 a 5174340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 5149756 - 5149594
Alignment:
Q  71 tcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagagaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaag 170  Q
    |||||||||||||| |||||||||||||| |||||||| ||||  |||||   ||| ||  | ||| | ||| |||| || | ||||||||||| | |||    
T  5149756 tcgcgatggtgtctcgaagagttggtgaaaataatggattgtcgtagaacacaagggcagttggttttgccagtgttttatgatgtagatccatgtgaag 5149657  T
Q  171 tacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttgaataagatttcaaagg 233  Q
    |||| || |||||  |||| ||||| ||||| |||||||||||||||||||  ||||||||||    
T  5149656 tacgtcaccaaacaagtgagtttggcaaagcatttcaaagtctcttgaatagaatttcaaagg 5149594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 5380365 - 5380563
Alignment:
Q  19 aattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagaga 118  Q
    ||||||||| |||  ||||||| ||||  ||||||||| |||||| || || || |||||||||||||| ||||||||||||||||| |||||||| |||    
T  5380365 aattgaacattctaaaatttctattattgttttttcaagaaattatgcagattcacgatggtgtcttgatgagttggtgaagataat-gagtgtcacaga 5380463  T
Q  119 actataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttga 218  Q
    || ||||  || || || || ||  ||||||| | ||| ||||| |   | ||||| || ||||| ||||| |||||| |||| ||| ||||||||||||    
T  5380464 accatagcacagatagtgctaccggtgttctatgatgttgatcccttggaggtacgtcaccaaactggtgagtttggacaagcttttgaaagtctcttga 5380563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 5184964 - 5184762
Alignment:
Q  17 tcaattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcaga 116  Q
    |||||||||||||||| | ||||| | ||  ||||||| | |||||| ||  | ||| |||||||| | || || ||||  ||||||||| ||||||  |    
T  5184964 tcaattgaacagtctcaagtttctataattgttttttccaaaaattatgccaattcgagatggtgtttggatgaattggaaaagataatgaagtgtcgca 5184865  T
Q  117 gaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctctt 216  Q
    |||| ||||| ||| ||||| ||||| ||||||||  |||||| || ||| ||||||| ||||| || || || ||||||| ||| ||||||||||| ||    
T  5184864 gaaccataggacaagttgttgttccagtgttctaccatgtagacccctctgaagtacgtcatcagacaggcgagtttggaatagcttttcaaagtctttt 5184765  T
Q  217 gaa 219  Q
    |||    
T  5184764 gaa 5184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 5107871 - 5107707
Alignment:
Q  34 aatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagagaactataggtcaaatt 133  Q
    ||||||| |||||||||| |||| |||||| ||| ||||||| ||||||||  | |||||| ||| ||||||||||||||  ||||  ||||| ||  |     
T  5107871 aatttctattatcattttctcaaaaaattatgcgaaatcgcgttggtgtctaaatgagttgttgacgataatggagtgtcgcagaagcatagggcaggtg 5107772  T
Q  134 gttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaa 198  Q
    || |||||  ||||||| | ||| ||||| ||  ||||||| |||||||| ||||| ||||||||    
T  5107771 gtgcttccggtgttctatgatgttgatccctcagaagtacgtcatcaaactggtgagtttggaaa 5107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 5139519 - 5139448
Alignment:
Q  155 gtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcctttcaaagtctcttgaataagatt 226  Q
    |||||||||||| ||||||| |||||||||||||| || |||||||| ||||||| ||| || |||||||||    
T  5139519 gtagatccatctgaagtacgtcatcaaaccggtgaattcggaaaagcttttcaaaatcttttaaataagatt 5139448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 5105556 - 5105510
Alignment:
Q  65 gcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtg 111  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  5105556 gcggaatcgcaatggtgtcttgaagagttggtgaagataacggagtg 5105510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 5394341 - 5394494
Alignment:
Q  18 caattgaacagtctcgaatttctgttatcattttttcaacaaattacgcggaatcgcgatggtgtcttgaagagttggtgaagataatggagtgtcagag 117  Q
    ||||||||||||||||||||||| | ||  |||| ||||  ||||| || || ||||||||||||||  | || ||||  || |||||| ||||||| ||    
T  5394341 caattgaacagtctcgaatttctataattgttttctcaaagaattatgctgattcgcgatggtgtctgaatgaattggaaaaaataatgaagtgtcaaag 5394440  T
Q  118 aactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagt 171  Q
    ||| || || ||| | ||| ||||| ||||||||  ||||||||| ||| ||||    
T  5394441 aaccattgggcaagtggttgttccagtgttctaccatgtagatccctctgaagt 5394494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 218
Target Start/End: Complemental strand, 5692959 - 5692830
Alignment:
Q  89 gagttggtgaagataatggagtgtcagagaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtg 188  Q
    |||||||| || |||||||||||||  ||||||||||| || || ||  | ||  ||||||| | ||| ||||| ||  | |||||||| ||||| ||||    
T  5692959 gagttggttaaaataatggagtgtcgcagaactatagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtg 5692860  T
Q  189 actttggaaaagcctttcaaagtctcttga 218  Q
    | ||||||||||| || |||||||||||||    
T  5692859 agtttggaaaagcgttccaaagtctcttga 5692830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 33858287 - 33858339
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||||||| ||||    
T  33858287 agggttaaatatatttttggtccctataaatataccaacttttcattttagtc 33858339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 17438429 - 17438480
Alignment:
Q  335 gggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||| ||||| ||||||| ||| |||| |||||||||||||||||    
T  17438429 gggttaaatatgtttttggtccctataaatataccaacttttcatttcagtc 17438480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 4606063 - 4606009
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||||| ||| ||||    
T  4606063 ttagggttaaatatgtttttggtccctataaatatacaaacttttcgttttagtc 4606009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 5174371 - 5174413
Alignment:
Q  258 tgaaatggagagacgcacttcgtgaggcagctgaccttgctgg 300  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||    
T  5174371 tgaaatggagagatgcacttcgtgaggctgctgagcttgctgg 5174413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 5276186 - 5276252
Alignment:
Q  258 tgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggta 324  Q
    ||||||||||||| |||||||||||||  |||||  ||||||| |||||||||  ||||| ||||||    
T  5276186 tgaaatggagagatgcacttcgtgaggttgctgagattgctggctttgtagttccaaatttcaggta 5276252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 5380597 - 5380663
Alignment:
Q  258 tgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggta 324  Q
    ||||||||||||| || |||| || ||| |||| | ||||||||||||||||| |||| ||||||||    
T  5380597 tgaaatggagagaggctcttcatggggctgctgcctttgctggatttgtagttctaaactccaggta 5380663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 376
Target Start/End: Original strand, 9372977 - 9373019
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaactttt 376  Q
    |||||||||||||||||| ||||||||||| |||| |||||||    
T  9372977 agggttaaatatatttttagtccctacaaatataccaactttt 9373019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 361
Target Start/End: Complemental strand, 211645 - 211616
Alignment:
Q  332 ttagggttaaatatattttttgtccctaca 361  Q
    ||||||||||||||||||||||||||||||    
T  211645 ttagggttaaatatattttttgtccctaca 211616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 5184727 - 5184666
Alignment:
Q  263 tggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggta 324  Q
    |||||||| || ||||||||||| |||| |||||| ||||||  |||| |||||||||||||    
T  5184727 tggagagaggctcttcgtgaggccgctggccttgcaggatttacagttctaaattccaggta 5184666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 5275957 - 5276086
Alignment:
Q  89 gagttggtgaagataatggagtgtcagagaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtg 188  Q
    ||||||||||| |||||| | ||||  ||||||||||| || || ||  | ||  ||||||| | ||| ||||| ||  | |||||||| ||||| ||||    
T  5275957 gagttggtgaaaataatgaaatgtcgcagaactatagggcagatagtgttgccggtgttctatgatgttgatccttcagatgtacgacaccaaacaggtg 5276056  T
Q  189 actttggaaaagcctttcaaagtctcttga 218  Q
    | ||||||||||| || |||||||||||||    
T  5276057 agtttggaaaagcgttccaaagtctcttga 5276086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 5692799 - 5692730
Alignment:
Q  258 tgaaatggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggtagtt 327  Q
    |||||||||||||||| ||| ||||||  ||||  |||||||| |||||||||  ||||| |||||||||    
T  5692799 tgaaatggagagacgcgcttagtgaggttgctgggcttgctggctttgtagttccaaatttcaggtagtt 5692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 5394589 - 5394637
Alignment:
Q  275 cttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggt 323  Q
    ||||||| |||||| | |||||| ||||||||||||||||||| |||||    
T  5394589 cttcgtgtggcagcaggccttgcaggatttgtagttttaaatttcaggt 5394637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 26682674 - 26682734
Alignment:
Q  326 ttaaacttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||| |||||||||||||| ||||| ||||||| ||| |||| |||||||| ||| ||||    
T  26682674 ttaaaattagggttaaatatgtttttggtccctataaatataccaacttttcgttttagtc 26682734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 42641425 - 42641367
Alignment:
Q  328 aaacttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||| ||||||| ||| |||| |||||||| ||||||||    
T  42641425 aaacttagggttaaatatgtttttggtccctataaatatactaacttttcgtttcagtc 42641367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 4053118 - 4053172
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||| ||| ||| |||| |||||||||||| ||||    
T  4053118 ttagggttaaatatatttttggtctctataaatataccaacttttcattttagtc 4053172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 9135309 - 9135363
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  9135309 ttagggttaaatatatttttagtccctataaatataccaacttttcgttttagtc 9135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 11602960 - 11603014
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||| || ||||||| ||| |||| |||||||||||| ||||    
T  11602960 ttagggttaaatatattattggtccctaaaaatataccaacttttcattttagtc 11603014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 42788150 - 42788105
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||||    
T  42788150 ttagggttaaatatatttttagtccctataaatatataaacttttc 42788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 37938886 - 37938938
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||| ||| ||| ||||||||||||| ||| ||||    
T  37938886 agggttaaatatatttttggtctctataaatatacaaacttttcgttttagtc 37938938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 42309443 - 42309495
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  42309443 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 42309495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 31311395 - 31311341
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||||||||| ||||    
T  31311395 ttagggttaaatatgtttttggtccctataaatatacaaacttttcattttagtc 31311341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 37169646 - 37169700
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||||||| ||||    
T  37169646 ttagggttaaatatatttttggtccctataaatataccaacttttcattttagtc 37169700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 23551154 - 23551101
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||||| ||||||| ||| |||| |||||||||||| ||||    
T  23551154 tagggttaaatatatttttggtccctataaatataccaacttttcattttagtc 23551101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 381
Target Start/End: Original strand, 4229320 - 4229367
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    |||||||||||| ||||| ||||||| ||| |||||||||||||||||    
T  4229320 agggttaaatatgtttttggtccctataaatatacaaacttttcattt 4229367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 38472198 - 38472252
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  38472198 ttagggttaaatatatttttagtccctataaatatactaacttttcgttttagtc 38472252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 16202381 - 16202434
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||| ||||||||||||| ||| |||| |||||||| ||| ||||    
T  16202381 tagggttaaatatgttttttgtccctataaaaataccaacttttcgttttagtc 16202434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 46888270 - 46888213
Alignment:
Q  329 aacttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||| ||||||||||||| ||| |||  |||||||| ||| ||||    
T  46888270 aacttagggttaaatatgttttttgtccctataaatatatcaacttttcgttttagtc 46888213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 52587073 - 52587122
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    |||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  52587073 ttagggttaaatatatttttggtccctataaatatatcaacttttcattt 52587122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 19841817 - 19841869
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  19841817 agggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 19841869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 29458353 - 29458405
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| || ||||||||| ||||    
T  29458353 agggttaaatatatttttggtccctataaatataccaatttttcattttagtc 29458405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 33098382 - 33098330
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  33098382 agggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 33098330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 42628773 - 42628817
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaactttt 376  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||    
T  42628773 ttagggttaaatatatttttggtccctataaatataccaactttt 42628817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 42737949 - 42737897
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  42737949 agggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 42737897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 43140524 - 43140576
Alignment:
Q  335 gggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtcg 387  Q
    ||||||||||| ||||| ||||||| ||| |||| |||||||||||| |||||    
T  43140524 gggttaaatatgtttttggtccctataaatatactaacttttcattttagtcg 43140576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 48016144 - 48016016
Alignment:
Q  104 atggagtgtcagagaactataggtcaaattgttcttccattgttctacggtgtagatccatctcaagtacgacatcaaaccggtgactttggaaaagcct 203  Q
    ||||||||||| | ||| ||||| ||| | ||||| ||  |||| |||  ||||||||||||  ||||||| |||||||  ||||| || |||| ||| |    
T  48016144 atggagtgtcacaaaaccataggccaagtggttctgccggtgttttacaatgtagatccatcggaagtacgtcatcaaattggtgagttcggaatagcat 48016045  T
Q  204 ttcaaagtctcttgaataagatttcaaag 232  Q
    |||||| ||| ||||  ||||||||||||    
T  48016044 ttcaaaatcttttgacgaagatttcaaag 48016016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 49408421 - 49408473
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  49408421 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 49408473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 51419541 - 51419593
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  51419541 agggttaaatatgtttttagtccctataaatataccaacttttcattttagtc 51419593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 55378742 - 55378794
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| |||||  |||||| ||| ||||||||||||||||| ||||    
T  55378742 agggttaaatatgtttttgatccctataaatatacaaacttttcattttagtc 55378794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 381
Target Start/End: Original strand, 44917476 - 44917525
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    |||||||||||||| ||||||||||||| ||| |||| ||||||||||||    
T  44917476 ttagggttaaatatgttttttgtccctataaatataccaacttttcattt 44917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 336 - 386
Target Start/End: Complemental strand, 26488289 - 26488239
Alignment:
Q  336 ggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||| ||||| ||||||||||| ||||||||||||| ||| ||||    
T  26488289 ggttaaatatgtttttggtccctacaaatatacaaacttttcgttttagtc 26488239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 27553013 - 27553067
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  27553013 ttagggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 27553067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 49459166 - 49459112
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| |||||  |||||||||| ||| ||||||||||||| ||||    
T  49459166 ttagggttaaatatgtttttgatccctacaaaaatataaacttttcattttagtc 49459112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 4350449 - 4350509
Alignment:
Q  263 tggagagacgcacttcgtgaggcagctgaccttgctggatttgtagttttaaattccaggt 323  Q
    |||||||||||||||||||| || |||| |||||| |||||||| ||  | ||||||||||    
T  4350449 tggagagacgcacttcgtgatgctgctggccttgcaggatttgttgtcctgaattccaggt 4350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 14254393 - 14254445
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||| ||| ||||    
T  14254393 agggttaaatatttttttggtccctataaatatacaaacttttcgttttagtc 14254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 14597160 - 14597212
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||| ||| ||||    
T  14597160 agggttaaatatgttttttgtccctataaatataccaacttttcgttttagtc 14597212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 22007964 - 22008016
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  22007964 agggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 22008016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 22787275 - 22787223
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  22787275 agggttaaatatatttttagtccctataaatataccaacttttcgttttagtc 22787223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 43201458 - 43201506
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    ||||||||||||||||||| ||||||| ||| |||  ||||||||||||    
T  43201458 tagggttaaatatatttttggtccctataaatatatcaacttttcattt 43201506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 47404904 - 47404956
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  47404904 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 47404956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 36309326 - 36309274
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||||||| ||||    
T  36309326 agggttaaatatttttttggtccctataaatatacaaacttttcattttagtc 36309274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 1702959 - 1702905
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  1702959 ttagggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 1702905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 2007258 - 2007204
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||||||| ||| ||| ||||||||||||| ||||    
T  2007258 ttagggttaaatatgtttttggtccctataaatatataaacttttcattttagtc 2007204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 736474 - 736429
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    ||||||||||||||||||||| |||||| ||| |||| ||||||||    
T  736474 ttagggttaaatatattttttctccctataaatataccaacttttc 736429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 21974018 - 21973973
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    |||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  21974018 ttagggttaaatatatttttggtccctataaatatactaacttttc 21973973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 24406986 - 24406933
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||| ||||| ||||||| ||| ||||||||||||| ||| ||||    
T  24406986 tagggttaaatatgtttttggtccctataaatatacaaacttttcgttttagtc 24406933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 30256122 - 30256077
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    |||||||||||||| ||||| ||||||| ||| |||||||||||||    
T  30256122 ttagggttaaatatgtttttggtccctataaatatacaaacttttc 30256077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 381
Target Start/End: Original strand, 6395228 - 6395276
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    ||||||| ||||| ||||| ||||||||||| |||| ||||||||||||    
T  6395228 tagggttgaatatgtttttggtccctacaaatataccaacttttcattt 6395276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 9327917 - 9327961
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    ||||||||||||| ||||||||||||| ||| |||| ||||||||    
T  9327917 tagggttaaatatgttttttgtccctataaatataccaacttttc 9327961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 12612177 - 12612125
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||| |||||||||||| ||||    
T  12612177 agggttaaatatatttttggtccctataaatataccaacttttcattttagtc 12612125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 41245621 - 41245673
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||||||| ||||    
T  41245621 agggttaaatatgttttttgtccctataaatataccaacttttcattttagtc 41245673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 27251607 - 27251658
Alignment:
Q  335 gggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||    
T  27251607 gggttaaatatgtttttggtccctacaaatatacgaacttttcattttagtc 27251658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 9437538 - 9437478
Alignment:
Q  326 ttaaacttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||| |||||||||||||| ||||| ||||||| ||| |||  |||||||||||| ||||    
T  9437538 ttaaaattagggttaaatatgtttttggtccctataaatatatcaacttttcattttagtc 9437478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 17157982 - 17158034
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||||||||| || ||| |||  |||||||||||| ||||    
T  17157982 agggttaaatatattttttgtccttataaatatatcaacttttcattttagtc 17158034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 36219307 - 36219359
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||||| ||| ||||    
T  36219307 agggttaaatatgtttttagtccctataaatatacaaacttttcgttttagtc 36219359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 42434203 - 42434151
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  42434203 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 42434151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 45070721 - 45070669
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  45070721 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 45070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 12444237 - 12444291
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  12444237 ttagggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 12444291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 13407941 - 13407995
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  13407941 ttagggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 13407995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 5244795 - 5244742
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  5244795 tagggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 5244742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 4209923 - 4209975
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||||  |||||| ||| |||||||||||| |||| ||||    
T  4209923 agggttaaatatatttttgatccctataaatatacaaactttttattttagtc 4209975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 28442707 - 28442671
Alignment:
Q  340 aaatatattttttgtccctacaaacatacaaactttt 376  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  28442707 aaatatattttttgtccttacaaatatacaaactttt 28442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 30888714 - 30888774
Alignment:
Q  326 ttaaacttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||| |||| ||||||||| ||||||||| ||| ||| ||||||||||||| ||| ||||    
T  30888714 ttaaatttagtgttaaatatgttttttgtctctataaatatacaaacttttcgttttagtc 30888774  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 41651082 - 41651134
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  41651082 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 41651134  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 22888247 - 22888193
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| ||||    
T  22888247 ttagggttaaatatgtttttggtctctataaatatacaaacttttcattttagtc 22888193  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 28868007 - 28868061
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||||| ||| ||||    
T  28868007 ttagggttaaatatgtttttggtccctataaatatacaaacttttcgttttagtc 28868061  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 46939711 - 46939657
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  46939711 ttagggttaaatatatttttggtccctataaatataccaacttttcgttttagtc 46939657  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 10556103 - 10556054
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    |||||||||||||| ||||| ||||||| ||| |||| ||||||||||||    
T  10556103 ttagggttaaatatgtttttggtccctataaatataccaacttttcattt 10556054  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 12300839 - 12300786
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||||||||| ||||||| ||| |||| |||||||| ||| ||||    
T  12300839 tagggttaaatatatttttggtccctataaatatactaacttttcgttttagtc 12300786  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 29823922 - 29823869
Alignment:
Q  333 tagggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    ||||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  29823922 tagggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 29823869  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 1377126 - 1377178
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| ||||    
T  1377126 agggttaaatatgtttttggtccctataaatataccaacttttcattttagtc 1377178  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 36566924 - 36566872
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||||||||| ||||||| ||| |||  |||||||||||| ||||    
T  36566924 agggttaaatatatttttagtccctataaatatatcaacttttcattttagtc 36566872  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 381
Target Start/End: Complemental strand, 52156 - 52107
Alignment:
Q  332 ttagggttaaatatattttttgtccctacaaacatacaaacttttcattt 381  Q
    |||||||||||||| ||||| ||||||| ||| |||| ||||||||||||    
T  52156 ttagggttaaatatgtttttggtccctataaatataccaacttttcattt 52107  T

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Target: scaffold0217 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 1450 - 1410
Alignment:
Q  337 gttaaatatattttttgtccctacaaacatacaaacttttc 377  Q
    ||||||||| ||||||||||||||||| |||| ||||||||    
T  1450 gttaaatatgttttttgtccctacaaatataccaacttttc 1410  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 220218 - 220166
Alignment:
Q  334 agggttaaatatattttttgtccctacaaacatacaaacttttcatttcagtc 386  Q
    |||||||||||| ||||||||||||| ||| |||| |||||||| ||| ||||    
T  220218 agggttaaatatgttttttgtccctataaatataccaacttttcgttttagtc 220166  T

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