View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_high_42 (Length: 329)
Name: NF7636_high_42
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_high_42 |
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Alignment Details
Target: chr8 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 44029353 - 44029043
Alignment:
| Q |
1 |
taggaaacaaatattgtagagaacaactattatatataagactaaaaaggttgaccctatatcatcctttattttagttatatcccaacaaccttaaaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44029353 |
taggaaacaaatattgtagagaacaactattatatataagactaaaaaggttgaccctatatcatcctttattttagttatatcccaacaaccttaaaat |
44029254 |
T |
|
| Q |
101 |
aaactaaacgtagttattaacaacacatcatttcttaattaaagctgcagctaccaccaaagcatatataccaggtagctagtttaattagcttcaatgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44029253 |
aaactaaacgtagttattaacaacacatcatttcttaattaaagctgcagctaccaccaaagcatatataccaggtagctagtttaattagcttcaatgt |
44029154 |
T |
|
| Q |
201 |
gatacatttaaatgaagaggatcattttctatgcaatcatttgaccaagaaagaaatcatag-aaaataaagttattatacatattctaatcaataaatt |
299 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44029153 |
gatgcatttaaatgaagaggatcattttctatgcaatcatttgaccaagaaagaaatcatagaaaaataaagttattatacatattctaatcaataaatt |
44029054 |
T |
|
| Q |
300 |
agaatatcttg |
310 |
Q |
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||||||||||| |
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| T |
44029053 |
agaatatcttg |
44029043 |
T |
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