View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_high_51 (Length: 295)
Name: NF7636_high_51
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_high_51 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 16194801 - 16195069
Alignment:
| Q |
18 |
caaaaggtatatatatgataataatcaagtgaaactattaatagtactataaataagcatgcatgaactattccttgaggaatttgcggaaatataaacg |
117 |
Q |
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| T |
16194801 |
caaaaggtatatatatgataataatcaagtgaaactattaatagtactataaataagcatgcatgaactattccttgaggaatttgcggaaatataaaca |
16194900 |
T |
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| Q |
118 |
agaggttttgaaaatttaagtgatactttggattctttatgcaaatgtaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16194901 |
agaggttttgaaaatttaagtgatactttggattctttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaac |
16195000 |
T |
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| Q |
218 |
ccaatttagttaaggaagactaggtatttcatgtaagtgtaacatgtattaaacttatgacacaggttc |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
16195001 |
ccaatttagttaaggaagactaggtatttcatgtaagtgtaacatgtattaaacttattacacaagttc |
16195069 |
T |
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