View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_high_54 (Length: 282)

Name: NF7636_high_54
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_high_54
NF7636_high_54
[»] chr3 (15 HSPs)
chr3 (1-276)||(20045759-20046034)
chr3 (1-260)||(19818209-19818468)
chr3 (14-276)||(20016419-20016681)
chr3 (1-266)||(19838030-19838295)
chr3 (1-260)||(19955727-19955986)
chr3 (1-257)||(19811935-19812191)
chr3 (14-262)||(19989172-19989420)
chr3 (13-260)||(20036825-20037072)
chr3 (14-260)||(26646662-26646908)
chr3 (14-222)||(19853202-19853410)
chr3 (13-260)||(19848639-19848886)
chr3 (46-137)||(24840226-24840317)
chr3 (40-133)||(20005231-20005324)
chr3 (46-133)||(19943498-19943585)
chr3 (179-233)||(19950803-19950857)
[»] chr4 (2 HSPs)
chr4 (14-131)||(6398042-6398159)
chr4 (1-95)||(6397945-6398039)
[»] chr1 (1 HSPs)
chr1 (15-158)||(1716968-1717111)
[»] chr8 (1 HSPs)
chr8 (82-137)||(22652376-22652431)
[»] chr5 (1 HSPs)
chr5 (1-158)||(26355134-26355291)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 20046034 - 20045759
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20046034 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgttgtctcaccaaagggaaaaataa 20045935  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20045934 atgtatttgtatcacaacaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 20045835  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 276  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20045834 aacttccttccacaccgattcaaattttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 20045759  T

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Target: chr3; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 19818468 - 19818209
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||| |||||||| |||| ||||||||| || || || |  |||||||| ||||||| ||    
T  19818468 tctttaactttgatgaaaacaggatcaccaatgataggataaccccccaaaactatgacatcctccaaagtgatagttgcctcaccaaatggaaaaacaa 19818369  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    | ||||| || ||||| ||||||||||| ||||||||   ||| ||||| ||||||||| ||||| | || || |   |||||||||| ||||||||||     
T  19818368 aggtgttagtctcacaacaccatttctcaacaaccccaaatagcaagttttgatttttatgaatgtagcatttagtactcataatagcatcaaagattct 19818269  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    | ||| |||||| || |||||| |||||||||| |||| ||||| |||||||| ||||||    
T  19818268 agctttcttccacacagattcatactttggtttaagttcatcaacccaactaaaccattt 19818209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 20016419 - 20016681
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||||||||||| ||||||||| |||||||| || ||||||||||| || ||||| | |||| |||| ||||| | |||||| ||||| |     
T  20016419 tgaaaacaggatcgccaatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtctt 20016518  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    | | |||||||||||| ||||| | | ||| ||||| |||||| | || |||| |||||| | | |||||||||| |||||||||||||| | ||||||     
T  20016519 agaacaccatttctccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccac 20016618  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 276  Q
    || |||||| |||||| ||| || | ||||| ||||| ||||||||| | ||| |||||||||    
T  20016619 acagattcatactttgttttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgc 20016681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 19838295 - 19838030
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||| |||| ||||||||||  ||| ||||||| ||||||||| |||||||| |||| ||| ||||| || ||||| |  |||||||| ||||| | ||    
T  19838295 tctttgacttcggtgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaa 19838196  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| || || ||||||||||||||||| |||||  |   ||  ||||| | ||||||| ||||| | || || |   |||| ||||| |||||||||||    
T  19838195 atgtattggtctcacagcaccatttctcaacaacttcaaataacaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattcc 19838096  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccatttttgttg 266  Q
    ||||| | ||||||| |||||| |||||||||| || ||||||| ||||| ||||||||| |||||    
T  19838095 aactttcctccaaacagattcatactttggtttaagcttatcaacccaacaaacccatttgtgttg 19838030  T

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Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 19955986 - 19955727
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||| |||| ||||||||||  ||| ||||||| ||||||||| |||||||| |||| ||| ||||| || ||||| |  |||||||| ||||| | ||    
T  19955986 tctttgacttcggtgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaa 19955887  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| ||||| ||||| ||||||||||| ||||| ||   ||| ||||| | ||||||| ||||| | || || |   |||| ||||| |||||||||||    
T  19955886 atgtatttgtctcacaacaccatttctcaacaactccaaatagcaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattcc 19955787  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    ||||| | ||||||| |||||| ||||| |||| ||||||| || ||||  |||||||||    
T  19955786 aactttcctccaaacagattcatacttttgtttaagtttatgaacccaagaaacccattt 19955727  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 19812191 - 19811935
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||| ||||||||| |||| | |||| ||||||||||||||||| |||||||| || ||||||||||| || || || | ||||||||| ||||||| ||    
T  19812191 tcttgaactttggtaaaaataggatcaccaatgatagggtaaccccccaaaaccataatatcctccaaagtgatagttgcttcaccaaatggaaaaacaa 19812092  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    | ||||| || ||||| ||||||||||| ||||||||    || || ||  ||||||| || |||  |||||| |   |||||||||| ||||||||||     
T  19812091 aggtgttagtctcacaacaccatttctcaacaaccccaaagagcaattttagatttttgagtatgtgacacttggtactcataatagcatcaaagattct 19811992  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaaccca 257  Q
    | ||| |||||| |  |||||| |||||||||| || | ||||| ||| ||||||||    
T  19811991 agctttcttccacaaagattcatactttggtttaagctcatcaacccatctaaccca 19811935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 19989420 - 19989172
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||| ||||  ||||||||||| || ||||| || | ||| ||||| || || || |  |||||||| ||||||| |||||||||||| ||    
T  19989420 tgaaaacaggatcaccaagaatagggtaaccccctaaaaccataacatcttccaaagtgatagttgcctcaccaaatggaaaaacaaatgtgtttgtctc 19989321  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    ||| ||||||||||| ||||||||   ||| ||||| |||| |||    ||||||||||| |   ||||||||||||||||||| ||||||| ||||||     
T  19989320 acaacaccatttctcaacaaccccaaatagcaagttatgatctttctttatgcaacacttggtactcataatagcttcaaagatgccaactttcttccac 19989221  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccattttt 262  Q
    ||  ||||||| || ||||| |||| ||||| ||||  |||||||||||    
T  19989220 acatattcaaatttgggtttaagttgatcaacccaataaacccattttt 19989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 20036825 - 20037072
Alignment:
Q  13 gtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtat 112  Q
    ||||||||| |||| ||||  | ||| |||||||| | ||| ||||||||||||||  | | ||| | ||||||||||| ||| | |||||| ||||| |    
T  20036825 gtgaaaacaggatcaccaagaacaggataacctcctagaaccatgatatcctccaaaatgactgttgcttcaccaaaggaaaacacaaatgtatttgtct 20036924  T
Q  113 cacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttcca 212  Q
       | |||||||||||||||||||| | ||| ||||| |||| |||| | ||| ||||||| | |  ||||||||| |||||||||||||||| ||||||    
T  20036925 tggaacaccatttctccacaaccccatatagcaagttttgatctttatgtatgtaacacttagtggccataatagcatcaaagattccaactttcttcca 20037024  T
Q  213 aactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
     || |||||| | ||| |||| ||||||| || ||||  |||||||||    
T  20037025 cacagattcatagttttgtttaagtttatgaacccaagaaacccattt 20037072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 260
Target Start/End: Complemental strand, 26646908 - 26646662
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||| ||||| ||||| ||||| |||||||| |||||||||||||| || || || | ||||||||||| ||  | ||| || ||||| ||    
T  26646908 tgaaaacaggatccccaataataggataaccccccaaaaccatgatatcctccaaagtaatagttgcttcaccaaaggcaatcacaaaggtatttgtctc 26646809  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    ||| ||||||||||| || ||||| | ||| ||||  ||||||||| | ||||  ||| ||| |  ||| || ||||||||||| ||||||| ||||||     
T  26646808 acaacaccatttctcaactaccccatatagcaagtcatgatttttatgtatgcggcaccttgtgcccattattgcttcaaagatgccaactttcttccac 26646709  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    |||| |||| | ||  |||| |||| ||||| ||| |||||||||||    
T  26646708 actgtttcatatttgagtttaagttgatcaacccatctaacccattt 26646662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 19853410 - 19853202
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||| | |||| ||||||||||||||||| |||||||| || | ||||||||| |||||||| | ||||||||| || || | |||||| || || ||    
T  19853410 tgaaaataggatcaccaatgatagggtaaccccccaaaaccataacatcctccaaagttattgttgcttcaccaaatgggaacacaaatgtattggtctc 19853311  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    | | |||||||| || ||||||||   ||  ||||| |||| |||    ||||| | ||| |   |||||||||| |||||||||||||||| ||||||     
T  19853310 agaacaccatttgtcaacaaccccacataacaagttttgatctttctttatgcagctcttagtactcataatagcatcaaagattccaactttcttccat 19853211  T
Q  214 actgattca 222  Q
    | |||||||    
T  19853210 agtgattca 19853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 260
Target Start/End: Complemental strand, 19848886 - 19848639
Alignment:
Q  13 gtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtat 112  Q
    ||||||||| |||| ||||  | ||| ||||| || | ||| |||||||||||||| || ||||| | ||||||||||| ||| | ||| || |||||||    
T  19848886 gtgaaaacaggatcaccaagaacaggataaccccctagaaccatgatatcctccaaagtgattgttgcttcaccaaaggaaaacacaaaggtatttgtat 19848787  T
Q  113 cacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttcca 212  Q
     |   ||||||||||| || |||||   ||| ||||| |||||||||   | | | ||||| | |  ||||||||| |||||||||||||||| ||||||    
T  19848786 taggacaccatttctcaactaccccaactagcaagttttgatttttatttaagtagcacttagtggccataatagcatcaaagattccaactttcttcca 19848687  T
Q  213 aactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
     || |||||| | ||| |||| ||||||| || ||||  |||||||||    
T  19848686 cacagattcatagttttgtttaagtttatgaacccaagaaacccattt 19848639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 24840226 - 24840317
Alignment:
Q  46 cccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaacccc 137  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||  |||| |  || |||||||| ||||| ||||||||||| ||||||||    
T  24840226 cccaaaacaatgacatcctccaaagtgattgttgcttcaccaaatagaaacacgaaggtgtttgtttcacaacaccatttctcaacaacccc 24840317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 20005231 - 20005324
Alignment:
Q  40 taacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaa 133  Q
    ||||| ||||||||||||| ||| ||||| || ||||| | |||||||||  |||| | ||| |||||||| ||||| ||||||||||| ||||    
T  20005231 taaccccccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctcaacaa 20005324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 19943585 - 19943498
Alignment:
Q  46 cccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaa 133  Q
    ||||||||||||| ||| ||||| || ||||| | |||||||||  |||| | ||| |||||||| ||||| ||||||||||| ||||    
T  19943585 cccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctcaacaa 19943498  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 19950857 - 19950803
Alignment:
Q  179 tcataatagcttcaaagattccaacttccttccaaactgattcaaactttggttt 233  Q
    |||||||||| |||||||||||| ||| |||||| || |||||| ||||||||||    
T  19950857 tcataatagcatcaaagattccagctttcttccacacagattcatactttggttt 19950803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 6398159 - 6398042
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| ||| ||||||||| ||||| || ||||||| ||||||||||| ||| |||||||| |  ||||||||||||||||  |||||||||||||     
T  6398159 tgaaaacaagattgccaatgatcgggtatccccccaaaataatgatatccttcaaagttattgttgcctcaccaaagggaaaaaggaatgtgtttgtatt 6398060  T
Q  114 acagcaccatttctccac 131  Q
    ||| ||||||||| ||||    
T  6398059 acatcaccatttccccac 6398042  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6397945 - 6398039
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaa 95  Q
    |||||||||| |||||||||| |||| ||| ||||||||||  | ||||| ||||||||||||||||| |||||||| |  ||||||||||||||    
T  6397945 tctttaacttgggtgaaaacaggatccccagtgatagggtagacccccaagacaatgatatcctccaaagttattgttgcctcaccaaagggaaa 6398039  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 1717111 - 1716968
Alignment:
Q  15 gaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatca 114  Q
    ||||||| |||| ||||||| ||||||| | || ||||| || ||||||||||| || ||||| | ||||||||| ||||| | |||||| ||||| |||    
T  1717111 gaaaacaggatcaccaatgacagggtaatcccctaaaaccataatatcctccaaagtgattgtggcttcaccaaaaggaaacacaaatgtatttgtctca 1717012  T
Q  115 cagcaccatttctccacaaccccttgtagtaagttctgattttt 158  Q
    || |||||||| || |||| ||| | ||  ||||| ||||||||    
T  1717011 caacaccatttttcaacaatcccatataacaagttttgattttt 1716968  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 22652376 - 22652431
Alignment:
Q  82 tcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaacccc 137  Q
    |||||||| ||||| | ||||| |||||| ||||||||||||||||| ||||||||    
T  22652376 tcaccaaatggaaacacaaatgagtttgtctcacagcaccatttctcaacaacccc 22652431  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26355134 - 26355291
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||||||| || | ||||| | |||| ||||||| ||||||||| || | ||| || | |||||||||   ||  ||||  |||||||| ||||| | ||    
T  26355134 tctttaacattcgcgaaaataggatcaccaatgacagggtaacccccaagaaccataacatcctccaaacctaccgtcgcctcaccaaacggaaacacaa 26355233  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgattttt 158  Q
    |||| || || ||||| |||||||||||||||||||| |  || ||||| ||||||||    
T  26355234 atgtattagtctcacaacaccatttctccacaaccccgtaaagcaagttttgattttt 26355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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