View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_high_71 (Length: 241)
Name: NF7636_high_71
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_high_71 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 26166083 - 26166297
Alignment:
| Q |
18 |
attcatacttaaccatctaactctaaggcagaagcagcacaacttaactgccattgacagaagctgaaatcaatccaactgatcagaacaatccgtaact |
117 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26166083 |
attcgtacttaaccatctaactctaaggcagaagcagcacaacttaactgccattgacagaagctgacatcaatccaactgatcagaacaatccgtaact |
26166182 |
T |
|
| Q |
118 |
ccgcctacagtagtctattccgatcactgccgaggtcctacttgagatcacataatcattctgagattaaaccttgtttgttcctatgtctgtagacata |
217 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26166183 |
ccgcttacagtagtctattccgatcactgccgaggtcctacttgagatcacataatcattctgagattaaaccttgtttgttcctatgtctgtagacata |
26166282 |
T |
|
| Q |
218 |
gccctagattataag |
232 |
Q |
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||||||||||||||| |
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| T |
26166283 |
gccctagattataag |
26166297 |
T |
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