View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_high_72 (Length: 241)
Name: NF7636_high_72
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_high_72 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 32672021 - 32672258
Alignment:
| Q |
4 |
atgatcttttgcttatttaccacctattcataaaagaaaagctcaatctcccttttgtgatcatacaaaatatgattcataccgtcgaaacctctaacaa |
103 |
Q |
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| T |
32672021 |
atgatcttttgcttatttaccacctattcataaaagaaaagctcaatctcccttttgtgatcatacaaaatatgattcataccgtcgaaacctctaacaa |
32672120 |
T |
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| Q |
104 |
aaagttcaatgtttcatatggaatacactcaccataattttcaaaaaatttaatgttccattagatagtgaggagtccaacttcgagtactccaaattta |
203 |
Q |
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| T |
32672121 |
aaagttcaatgtttcatatggaatacactcaccataattttcaaaaaatttaatgttccattagatagtgaggagtccaacttcgagtactccaaattta |
32672220 |
T |
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| Q |
204 |
ctccaaaaaatgtcaacaatatacaatttagattctcc |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
32672221 |
ctccaaaaaatgtcaacaatatacaatttagattctcc |
32672258 |
T |
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