View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_low_23 (Length: 431)

Name: NF7636_low_23
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_low_23
NF7636_low_23
[»] chr2 (36 HSPs)
chr2 (96-312)||(1186667-1186883)
chr2 (321-431)||(10249378-10249488)
chr2 (325-431)||(28863453-28863559)
chr2 (326-431)||(9058479-9058584)
chr2 (326-431)||(33436096-33436201)
chr2 (324-431)||(7465731-7465838)
chr2 (325-427)||(32505648-32505750)
chr2 (330-431)||(19930816-19930917)
chr2 (327-431)||(13438343-13438447)
chr2 (327-431)||(17473020-17473124)
chr2 (327-431)||(27864704-27864808)
chr2 (327-431)||(40701478-40701582)
chr2 (325-431)||(5574484-5574590)
chr2 (326-431)||(30915462-30915567)
chr2 (327-431)||(28381651-28381755)
chr2 (326-431)||(38882807-38882914)
chr2 (327-427)||(4060685-4060785)
chr2 (326-431)||(20700814-20700919)
chr2 (327-431)||(40613898-40614002)
chr2 (326-431)||(42257192-42257297)
chr2 (326-431)||(38273138-38273243)
chr2 (324-431)||(2533121-2533227)
chr2 (326-431)||(26891500-26891605)
chr2 (325-431)||(33436209-33436315)
chr2 (328-431)||(41575138-41575242)
chr2 (322-431)||(17820000-17820109)
chr2 (327-431)||(38732354-38732458)
chr2 (327-431)||(43490121-43490225)
chr2 (345-431)||(2997483-2997569)
chr2 (333-431)||(3439985-3440083)
chr2 (325-431)||(36168834-36168940)
chr2 (326-431)||(45097731-45097836)
chr2 (343-431)||(13365369-13365457)
chr2 (378-427)||(3737994-3738043)
chr2 (378-431)||(3034979-3035032)
chr2 (378-431)||(3154194-3154247)
[»] chr4 (36 HSPs)
chr4 (327-431)||(41236347-41236451)
chr4 (326-431)||(29239885-29239990)
chr4 (326-431)||(48183045-48183150)
chr4 (326-431)||(50052424-50052529)
chr4 (327-431)||(11511458-11511562)
chr4 (326-431)||(480443-480548)
chr4 (322-431)||(29234241-29234350)
chr4 (327-431)||(6034044-6034148)
chr4 (327-431)||(54473529-54473633)
chr4 (326-431)||(42044363-42044468)
chr4 (327-431)||(3481654-3481758)
chr4 (326-431)||(23608234-23608339)
chr4 (326-431)||(24995103-24995208)
chr4 (327-431)||(31910192-31910296)
chr4 (327-427)||(50526171-50526271)
chr4 (325-431)||(47986206-47986312)
chr4 (326-431)||(29977884-29977989)
chr4 (326-431)||(19670712-19670817)
chr4 (378-431)||(41823933-41823986)
chr4 (327-431)||(40574779-40574883)
chr4 (332-431)||(53352562-53352660)
chr4 (325-431)||(50813888-50813994)
chr4 (326-431)||(55475190-55475295)
chr4 (345-431)||(17983739-17983825)
chr4 (326-431)||(32766957-32767062)
chr4 (325-428)||(28480267-28480370)
chr4 (325-428)||(28481142-28481245)
chr4 (325-428)||(28482017-28482120)
chr4 (324-431)||(44536742-44536848)
chr4 (326-431)||(48647722-48647827)
chr4 (327-431)||(55079709-55079814)
chr4 (326-431)||(29547955-29548060)
chr4 (327-431)||(8343159-8343263)
chr4 (327-431)||(18924491-18924595)
chr4 (365-431)||(56300161-56300227)
chr4 (335-431)||(29589736-29589831)
[»] chr1 (33 HSPs)
chr1 (327-431)||(48716278-48716382)
chr1 (326-427)||(2581914-2582015)
chr1 (326-431)||(38632317-38632422)
chr1 (327-431)||(9474872-9474976)
chr1 (326-431)||(8346384-8346489)
chr1 (327-431)||(3000319-3000423)
chr1 (327-431)||(27564731-27564835)
chr1 (326-431)||(38595153-38595258)
chr1 (330-431)||(44548372-44548473)
chr1 (322-431)||(50630453-50630562)
chr1 (327-431)||(47452316-47452420)
chr1 (324-427)||(51898683-51898786)
chr1 (325-431)||(41758803-41758909)
chr1 (326-431)||(32813246-32813351)
chr1 (327-431)||(43132-43236)
chr1 (330-431)||(26274435-26274536)
chr1 (326-431)||(49811523-49811628)
chr1 (328-427)||(11152378-11152476)
chr1 (327-431)||(37649198-37649302)
chr1 (326-431)||(5958996-5959101)
chr1 (322-431)||(50590996-50591105)
chr1 (326-431)||(45044556-45044661)
chr1 (357-431)||(13414791-13414865)
chr1 (326-431)||(23597087-23597192)
chr1 (334-431)||(26440741-26440838)
chr1 (327-427)||(3302533-3302633)
chr1 (327-431)||(41608489-41608593)
chr1 (332-431)||(44453984-44454083)
chr1 (325-431)||(37926434-37926540)
chr1 (370-427)||(48489343-48489400)
chr1 (368-422)||(44334175-44334229)
chr1 (327-427)||(6260870-6260970)
chr1 (327-431)||(47748443-47748546)
[»] chr8 (30 HSPs)
chr8 (326-431)||(14547921-14548026)
chr8 (327-431)||(504117-504221)
chr8 (327-431)||(12831047-12831151)
chr8 (327-431)||(15197333-15197437)
chr8 (327-431)||(40423939-40424043)
chr8 (327-431)||(23122593-23122697)
chr8 (327-431)||(34012292-34012396)
chr8 (325-427)||(37038477-37038579)
chr8 (327-431)||(1179936-1180040)
chr8 (328-431)||(5957831-5957934)
chr8 (325-431)||(44507083-44507189)
chr8 (326-431)||(10284627-10284732)
chr8 (327-431)||(15048178-15048281)
chr8 (346-431)||(8841428-8841513)
chr8 (332-431)||(10621083-10621182)
chr8 (327-431)||(43414577-43414681)
chr8 (326-431)||(16383376-16383481)
chr8 (328-431)||(9122196-9122289)
chr8 (326-431)||(4854859-4854964)
chr8 (326-431)||(34307215-34307320)
chr8 (327-431)||(30479470-30479574)
chr8 (326-431)||(15258925-15259030)
chr8 (326-431)||(24307789-24307894)
chr8 (327-410)||(14055609-14055692)
chr8 (324-431)||(17443822-17443929)
chr8 (325-431)||(32032723-32032828)
chr8 (326-431)||(42221514-42221619)
chr8 (327-431)||(20074938-20075034)
chr8 (326-431)||(16056397-16056502)
chr8 (326-390)||(24307628-24307692)
[»] chr5 (29 HSPs)
chr5 (327-431)||(40145407-40145511)
chr5 (330-431)||(18520880-18520981)
chr5 (326-430)||(13811651-13811755)
chr5 (324-431)||(2740271-2740378)
chr5 (326-431)||(36732938-36733043)
chr5 (327-431)||(33149634-33149738)
chr5 (327-431)||(35785199-35785303)
chr5 (327-427)||(14831814-14831914)
chr5 (327-431)||(35943888-35943992)
chr5 (327-431)||(42414298-42414402)
chr5 (327-431)||(28177775-28177879)
chr5 (324-431)||(6679695-6679802)
chr5 (326-431)||(15409606-15409711)
chr5 (326-431)||(3921261-3921366)
chr5 (321-418)||(41470425-41470522)
chr5 (327-431)||(26720516-26720620)
chr5 (327-431)||(26990265-26990369)
chr5 (328-431)||(36875608-36875702)
chr5 (325-431)||(2252164-2252270)
chr5 (326-427)||(31008987-31009088)
chr5 (373-431)||(31132390-31132448)
chr5 (322-431)||(6259997-6260106)
chr5 (326-431)||(39688893-39688998)
chr5 (327-431)||(33825320-33825424)
chr5 (380-431)||(21370057-21370108)
chr5 (350-431)||(39557513-39557594)
chr5 (327-427)||(20073516-20073616)
chr5 (328-431)||(16327902-16328005)
chr5 (326-428)||(38296202-38296304)
[»] chr3 (37 HSPs)
chr3 (327-431)||(53982011-53982115)
chr3 (327-431)||(33644200-33644304)
chr3 (326-431)||(49607413-49607518)
chr3 (326-431)||(54868891-54868996)
chr3 (332-431)||(52629305-52629404)
chr3 (325-431)||(17470403-17470509)
chr3 (327-431)||(8076393-8076497)
chr3 (326-430)||(27714888-27714992)
chr3 (328-431)||(31456690-31456793)
chr3 (326-431)||(11095351-11095454)
chr3 (327-431)||(26141528-26141632)
chr3 (331-431)||(48587087-48587187)
chr3 (332-431)||(26754700-26754799)
chr3 (326-431)||(33118847-33118952)
chr3 (326-431)||(36707424-36707525)
chr3 (326-431)||(11347918-11348023)
chr3 (326-431)||(41189760-41189865)
chr3 (324-431)||(24699950-24700057)
chr3 (325-431)||(35536624-35536730)
chr3 (325-429)||(9562997-9563101)
chr3 (327-431)||(14623835-14623939)
chr3 (327-431)||(47531865-47531969)
chr3 (327-431)||(20764911-20765015)
chr3 (331-431)||(30801729-30801829)
chr3 (327-431)||(51419356-51419460)
chr3 (328-431)||(13898051-13898154)
chr3 (325-431)||(8956760-8956866)
chr3 (325-431)||(48375702-48375808)
chr3 (326-431)||(11907370-11907475)
chr3 (334-430)||(35093592-35093688)
chr3 (327-431)||(45058549-45058652)
chr3 (330-431)||(25407143-25407245)
chr3 (349-431)||(36331325-36331407)
chr3 (324-389)||(36331416-36331481)
chr3 (327-431)||(41080709-41080811)
chr3 (322-361)||(21746249-21746288)
chr3 (335-431)||(39670019-39670115)
[»] chr7 (37 HSPs)
chr7 (326-431)||(7389388-7389493)
chr7 (325-431)||(36361909-36362015)
chr7 (326-431)||(8080379-8080484)
chr7 (327-431)||(19329842-19329946)
chr7 (327-431)||(38267040-38267144)
chr7 (325-431)||(3434560-3434666)
chr7 (325-431)||(36362024-36362130)
chr7 (330-431)||(3783998-3784099)
chr7 (326-431)||(38837216-38837321)
chr7 (327-431)||(4999510-4999614)
chr7 (327-431)||(35137533-35137637)
chr7 (326-431)||(19436183-19436288)
chr7 (326-431)||(40957706-40957811)
chr7 (328-431)||(32951489-32951592)
chr7 (330-431)||(3694370-3694471)
chr7 (326-431)||(38044196-38044301)
chr7 (327-431)||(8238212-8238317)
chr7 (332-431)||(35522881-35522980)
chr7 (327-430)||(21234401-21234504)
chr7 (326-431)||(11044187-11044282)
chr7 (325-431)||(22343359-22343465)
chr7 (325-431)||(26296642-26296748)
chr7 (325-431)||(41915739-41915845)
chr7 (327-421)||(46374808-46374902)
chr7 (326-431)||(18207179-18207283)
chr7 (326-431)||(36208172-36208277)
chr7 (327-431)||(39255920-39256023)
chr7 (327-431)||(40846109-40846213)
chr7 (326-427)||(7727905-7728006)
chr7 (325-431)||(46033797-46033903)
chr7 (326-431)||(10343559-10343664)
chr7 (326-431)||(35468851-35468956)
chr7 (325-431)||(12310904-12311008)
chr7 (368-431)||(16374820-16374883)
chr7 (327-431)||(32564422-32564526)
chr7 (332-431)||(2318239-2318338)
chr7 (327-431)||(41423682-41423786)
[»] chr6 (21 HSPs)
chr6 (327-431)||(32869678-32869782)
chr6 (330-431)||(22880654-22880755)
chr6 (327-431)||(17598554-17598658)
chr6 (326-431)||(6209461-6209566)
chr6 (325-431)||(11427614-11427722)
chr6 (327-431)||(31109396-31109500)
chr6 (325-431)||(31976246-31976352)
chr6 (327-431)||(29857827-29857931)
chr6 (326-431)||(31110757-31110860)
chr6 (326-431)||(15832576-15832681)
chr6 (326-431)||(15990038-15990143)
chr6 (330-431)||(23128123-23128224)
chr6 (326-431)||(30341356-30341461)
chr6 (327-431)||(15508020-15508124)
chr6 (331-431)||(28536484-28536582)
chr6 (327-431)||(31953026-31953130)
chr6 (327-431)||(4231548-4231652)
chr6 (328-431)||(946377-946480)
chr6 (326-431)||(12732481-12732586)
chr6 (325-361)||(22422084-22422120)
chr6 (381-431)||(30870068-30870118)
[»] scaffold0321 (1 HSPs)
scaffold0321 (326-431)||(10105-10210)
[»] scaffold1268 (1 HSPs)
scaffold1268 (327-431)||(925-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (327-431)||(925-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (327-431)||(4029-4133)
[»] scaffold0110 (1 HSPs)
scaffold0110 (322-431)||(8859-8968)
[»] scaffold0316 (1 HSPs)
scaffold0316 (370-431)||(17097-17158)
[»] scaffold0018 (1 HSPs)
scaffold0018 (343-431)||(152514-152602)


Alignment Details
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 96 - 312
Target Start/End: Original strand, 1186667 - 1186883
Alignment:
Q  96 tggaacaagtatgtattgttatgttattattagtgaatgtgctatgtgacattcatgtgtaattgagtcattcagggttcatgaagggtttattcatttt 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1186667 tggaacaagtatgtattgttatgttattattagtgaatgtgctatgtgacattcatgtgtaattgagtcattcagggttcatgaagggtttattcatttt 1186766  T
Q  196 agtaggtagcgtgccgcaaaaccatttcccttcccaattccctttaattattgcctacgtggcacatcaattgtgtataaagtgacnnnnnnntttggga 295  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||       |||||||    
T  1186767 agtaggtagcgtgccacaaaaccatttcccttcccaattcccttgaattattgcctacgtggcacatcaattatgtataaagtgacaaaaaaatttggga 1186866  T
Q  296 cctatatatatgtcatc 312  Q
    |||||||||||||||||    
T  1186867 cctatatatatgtcatc 1186883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 321 - 431
Target Start/End: Complemental strand, 10249488 - 10249378
Alignment:
Q  321 taattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 420  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  10249488 taataagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 10249389  T
Q  421 actttctcttt 431  Q
    |||||||||||    
T  10249388 actttctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 28863453 - 28863559
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  28863453 tagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 28863552  T
Q  425 tctcttt 431  Q
    |||||||    
T  28863553 tctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 9058479 - 9058584
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9058479 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 9058578  T
Q  426 ctcttt 431  Q
    ||||||    
T  9058579 ctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 33436201 - 33436096
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33436201 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 33436102  T
Q  426 ctcttt 431  Q
    ||||||    
T  33436101 ctcttt 33436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 324 - 431
Target Start/End: Complemental strand, 7465838 - 7465731
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  7465838 ttagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 7465739  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  7465738 ttctcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 32505750 - 32505648
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||||||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  32505750 tagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 32505651  T
Q  425 tct 427  Q
    |||    
T  32505650 tct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 19930917 - 19930816
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T
Q  430 tt 431  Q
    ||    
T  19930817 tt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||| ||||| | | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  427 tcttt 431  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  427 tcttt 431  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 27864704 - 27864808
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  427 tcttt 431  Q
    |||||    
T  27864804 tcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  427 tcttt 431  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 5574590 - 5574484
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||||||| || || |||||||||||||||||||||||||| |||||||||||||||||    
T  5574590 tagagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 5574491  T
Q  425 tctcttt 431  Q
    |||||||    
T  5574490 tctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 30915462 - 30915567
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||  || || ||||||||||||||||||||||||||||||| |||||||||||||    
T  30915462 agagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 30915561  T
Q  426 ctcttt 431  Q
    ||||||    
T  30915562 ctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 28381755 - 28381651
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| || |||| || |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  427 tcttt 431  Q
    |||||    
T  28381655 tcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 38882914 - 38882807
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtgga---ccccgcacaagcacac 422  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||   |||||||||||| |||    
T  38882914 agagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcac 38882816  T
Q  423 tttctcttt 431  Q
    |||||||||    
T  38882815 tttctcttt 38882807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  427 t 427  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 20700814 - 20700919
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| ||||| ||||||||| ||| ||||||  |  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  20700814 agagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacacttt 20700913  T
Q  426 ctcttt 431  Q
    ||||||    
T  20700914 ctcttt 20700919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||| || |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  427 tcttt 431  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 42257192 - 42257297
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| | ||||||||||||| | ||||||||| || || ||||||||||||||| | ||| |||||||||||||||||||||||    
T  42257192 agagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacacttt 42257291  T
Q  426 ctcttt 431  Q
    ||||||    
T  42257292 ctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 38273243 - 38273138
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| ||||||||||||||  ||||| |||||||| ||| ||| ||| || |||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  38273243 agagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacacttt 38273144  T
Q  426 ctcttt 431  Q
    ||||||    
T  38273143 ctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 431
Target Start/End: Original strand, 2533121 - 2533227
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    ||||||| |||||||||||||| ||||| ||||||||| | | ||||||| || |||||||||||||||||||| ||| | |||||||||||||||||||    
T  2533121 ttagagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacact 2533219  T
Q  424 ttctcttt 431  Q
    || |||||    
T  2533220 ttttcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 26891605 - 26891500
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| ||||||||||| |||||||||||||||||| |||  | |||| || ||||||||||||||| || |||||||||||| || ||||||||| |||    
T  26891605 agagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatttt 26891506  T
Q  426 ctcttt 431  Q
    ||||||    
T  26891505 ctcttt 26891500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 33436209 - 33436315
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||| |||||| |||||||| ||| ||||||| || || |||||||||||||||   || ||||||   ||||||||||||||    
T  33436209 tagagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactt 33436308  T
Q  425 tctcttt 431  Q
    |||||||    
T  33436309 tctcttt 33436315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 41575138 - 41575242
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggacccc-gcacaagcacactttc 426  Q
    |||||||||||||||||| |||||| ||| |||| ||| |||||||| | ||||||||| ||||| || |||| |||||||||  |||||||||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  427 tcttt 431  Q
    |||||    
T  41575238 tcttt 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 17820109 - 17820000
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||| |||| |||||||||||||| |  |||||||||||| |||  |||||| || ||||||||||||||| || || ||||||||||| ||||| ||||    
T  17820109 aatttgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T
Q  422 ctttctcttt 431  Q
     |||||||||    
T  17820009 ttttctcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 38732354 - 38732458
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||||||||| ||| ||||| | |  |||||| || ||||||||||||||| || ||||  ||||||||||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  427 tcttt 431  Q
    |||||    
T  38732454 tcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 43490121 - 43490225
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||||||||||||| ||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||     
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttta 43490220  T
Q  427 tcttt 431  Q
    |||||    
T  43490221 tcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 431
Target Start/End: Complemental strand, 2997569 - 2997483
Alignment:
Q  345 acccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 431
Target Start/End: Original strand, 3439985 - 3440083
Alignment:
Q  333 tgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||| |||||||||||||||||||||| ||   | |||| || ||||||||||| ||| ||  | |||||||||||||||||||||| |||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctcttt 3440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 36168834 - 36168940
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||||||| |||||| || ||||| | | ||| ||  || ||||||||| |||||||| | ||| ||||||||||||||||| ||||    
T  36168834 tagagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactt 36168933  T
Q  425 tctcttt 431  Q
    |||||||    
T  36168934 tctcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 45097836 - 45097731
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||||||||||||| | |  |||||| ||  |||||||||||||| || | ||  ||||||||||||||| |||||||    
T  45097836 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 45097737  T
Q  426 ctcttt 431  Q
    ||||||    
T  45097736 ctcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 431
Target Start/End: Original strand, 13365369 - 13365457
Alignment:
Q  343 acacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||| ||||||||||||  |||||| || ||||||||||||||| ||   ||  ||||||||||||||| |||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 3737994 - 3738043
Alignment:
Q  378 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||||||||||||| || |||| |||||||||||||||||||| |||||    
T  3737994 cacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 3035032 - 3034979
Alignment:
Q  378 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||||| || ||||  ||||||||||||||| | |||||||||||    
T  3035032 cacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctcttt 3034979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 3154194 - 3154247
Alignment:
Q  378 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||||||| ||||| |||| ||||| ||| |||| |||||||||    
T  3154194 cacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctcttt 3154247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  427 tcttt 431  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 29239885 - 29239990
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  29239885 agagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacacttt 29239984  T
Q  426 ctcttt 431  Q
    ||||||    
T  29239985 ctcttt 29239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 48183150 - 48183045
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48183150 agagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48183051  T
Q  426 ctcttt 431  Q
    ||||||    
T  48183050 ctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 50052529 - 50052424
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50052529 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50052430  T
Q  426 ctcttt 431  Q
    ||||||    
T  50052429 ctcttt 50052424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 11511562 - 11511458
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  427 tcttt 431  Q
    |||||    
T  11511462 tcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 480548 - 480443
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  480548 agagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 480449  T
Q  426 ctcttt 431  Q
    ||||||    
T  480448 ctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 29234350 - 29234241
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| ||||| | |  ||||||||||||||||||||||||||||||||||||||||||||    
T  29234350 aattagagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T
Q  422 ctttctcttt 431  Q
    ||||||||||    
T  29234250 ctttctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  427 tcttt 431  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  427 tcttt 431  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 42044468 - 42044363
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| | | ||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42044468 agagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 42044369  T
Q  426 ctcttt 431  Q
    ||||||    
T  42044368 ctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 3481654 - 3481758
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||| ||||||||||||| ||  ||||||| || |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  427 tcttt 431  Q
    |||||    
T  3481754 tcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 23608234 - 23608339
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||| |||||||||||||| || ||||| ||||||||||| || ||||||||||||||||||||||||||| || || ||||||||||||||    
T  23608234 agagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacacttt 23608333  T
Q  426 ctcttt 431  Q
    ||||||    
T  23608334 ctcttt 23608339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 24995208 - 24995103
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||| || ||||||||||| |||||||| ||| ||||||| || || |||||| |||||||||||||||||||||||||||||||||| |||    
T  24995208 agagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacatttt 24995109  T
Q  426 ctcttt 431  Q
    ||||||    
T  24995108 ctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 31910192 - 31910296
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||| ||||| ||  ||||||| || |||||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  427 tcttt 431  Q
    |||||    
T  31910292 tcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| | ||||||||||||| ||| ||||||| || |||||||||||||||||| ||||||||||  |||||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  427 t 427  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 47986206 - 47986312
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| ||||||||||||||||||| | |  ||||||||| ||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  47986206 tagagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 47986305  T
Q  425 tctcttt 431  Q
    |||||||    
T  47986306 tctcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 29977884 - 29977989
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||| | | || |||||||||||| |||  || ||| || |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  29977884 agagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacacttt 29977983  T
Q  426 ctcttt 431  Q
    ||||||    
T  29977984 ctcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 19670817 - 19670712
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  ||||||  | ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  19670817 agagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 19670718  T
Q  426 ctcttt 431  Q
    ||||||    
T  19670717 ctcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 41823933 - 41823986
Alignment:
Q  378 cacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41823933 cacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 40574779 - 40574883
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| |||||||||| |||| ||| ||||||| || |||||||||||||||||  |  || |||| |||| ||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  427 tcttt 431  Q
    |||||    
T  40574879 tcttt 40574883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 431
Target Start/End: Complemental strand, 53352660 - 53352562
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||||||||||||| ||||| |   ||| ||| |  ||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 50813994 - 50813888
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| |||| ||||||||| |||| |||  |||||| || ||||||||||||||| || ||||  || |||||||||||| ||||||    
T  50813994 tagagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactt 50813895  T
Q  425 tctcttt 431  Q
    |||||||    
T  50813894 tctcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 55475190 - 55475295
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||||||||||||| ||| ||||||| || ||||||||||||||| || | ||  ||||||| ||| ||| |||||||    
T  55475190 agagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacacttt 55475289  T
Q  426 ctcttt 431  Q
    ||||||    
T  55475290 ctcttt 55475295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 431
Target Start/End: Complemental strand, 17983825 - 17983739
Alignment:
Q  345 acccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 32766957 - 32767062
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| |||| |||||||||||||| |||  |||||| ||  |||||||||||||| || | ||  ||||||| ||||||| |||||||    
T  32766957 agagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacacttt 32767056  T
Q  426 ctcttt 431  Q
    ||||||    
T  32767057 ctcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 28480370 - 28480267
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| || ||||||||||| ||||||||| ||||| ||   || |||  | ||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  28480370 tagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactt 28480271  T
Q  425 tctc 428  Q
    ||||    
T  28480270 tctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 28481245 - 28481142
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| || ||||||||||| ||||||||| ||||| ||   || |||  | ||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  28481245 tagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactt 28481146  T
Q  425 tctc 428  Q
    ||||    
T  28481145 tctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 28482120 - 28482017
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| || ||||||||||| ||||||||| ||||| ||   || |||  | ||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  28482120 tagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactt 28482021  T
Q  425 tctc 428  Q
    ||||    
T  28482020 tctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 431
Target Start/End: Complemental strand, 44536848 - 44536742
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    ||||||| |||||||||| ||||  ||||||||||||| ||| || ||||||| ||||||||||||||| || ||||  | |||||| || ||| |||||    
T  44536848 ttagagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacact 44536750  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  44536749 ttctcttt 44536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 48647827 - 48647722
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||| ||||| ||| ||||||||  ||||| |||  || ||| || || |||||||| |||||| ||||||||||| ||||||||||||| |||    
T  48647827 agagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaattt 48647728  T
Q  426 ctcttt 431  Q
    ||||||    
T  48647727 ctcttt 48647722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 55079814 - 55079709
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtgga-ccccgcacaagcacacttt 425  Q
    |||| |||||||||| ||||||||||||||||||| |||  |||||| ||  |||||||||||||| || | ||  |||| |||| |||||| |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  426 ctcttt 431  Q
    ||||||    
T  55079714 ctcttt 55079709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 29548060 - 29547955
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||||||||||||| | |  |||||| || ||||||||||||||| || | ||  |||| |||||| ||| |||||||    
T  29548060 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacacttt 29547961  T
Q  426 ctcttt 431  Q
     |||||    
T  29547960 ttcttt 29547955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 8343263 - 8343159
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||| ||||||||||||||| | | ||||||| |  || |||||||||||| || | ||  ||||||||||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  427 tcttt 431  Q
    |||||    
T  8343163 tcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 18924595 - 18924491
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| ||||| |||| | ||||||||||||||||| |||  |||| |||| ||||||||||||||| || |  |  || || ||||||||| ||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttc 18924496  T
Q  427 tcttt 431  Q
    |||||    
T  18924495 tcttt 18924491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 431
Target Start/End: Complemental strand, 56300227 - 56300161
Alignment:
Q  365 catttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||| ||||||||||||||| || ||||  || | || |||||| ||||||||||||||    
T  56300227 catttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctcttt 56300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 29589831 - 29589736
Alignment:
Q  335 atacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||| |||||||||| || ||||| |||  |||||| || ||||||||||||| | || | ||  |||||||| |||||| |||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  427 tcttt 431  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 2581914 - 2582015
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2581914 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 2582013  T
Q  426 ct 427  Q
    ||    
T  2582014 ct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 38632422 - 38632317
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38632422 agagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38632323  T
Q  426 ctcttt 431  Q
     |||||    
T  38632322 ttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  427 tcttt 431  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 8346489 - 8346384
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  8346489 agagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacacttt 8346390  T
Q  426 ctcttt 431  Q
    ||||||    
T  8346389 ctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  427 tcttt 431  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  427 tcttt 431  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 38595153 - 38595258
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||| ||||| ||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||    
T  38595153 agagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacacttt 38595252  T
Q  426 ctcttt 431  Q
    ||||||    
T  38595253 ctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 44548473 - 44548372
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||| | ||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  430 tt 431  Q
    ||    
T  44548373 tt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 322 - 431
Target Start/End: Original strand, 50630453 - 50630562
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||||||||||||||||||||| ||||||||||||||||| | | ||||  | || ||||||||||||||||||||||||||||||||||||||||||||    
T  50630453 aattagagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T
Q  422 ctttctcttt 431  Q
    ||||||||||    
T  50630553 ctttctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  427 tcttt 431  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 324 - 427
Target Start/End: Complemental strand, 51898786 - 51898683
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    |||||||||||||||||||||| | ||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  51898786 ttagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 51898687  T
Q  424 ttct 427  Q
    ||||    
T  51898686 ttct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 41758803 - 41758909
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||||| |||  |||||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||||||| |||||||    
T  41758803 tagagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactt 41758902  T
Q  425 tctcttt 431  Q
    |||||||    
T  41758903 tctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 32813246 - 32813351
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||| ||| || |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32813246 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacacttt 32813345  T
Q  426 ctcttt 431  Q
    ||||||    
T  32813346 ctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||  |||||| | ||||| | | ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  427 tcttt 431  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 431
Target Start/End: Original strand, 26274435 - 26274536
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||| || ||||||||||||| |||||||||||| || ||||||| ||||||| |||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttct 26274534  T
Q  430 tt 431  Q
    ||    
T  26274535 tt 26274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 49811628 - 49811523
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||| ||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||  | ||| |||||||||||||||||    
T  49811628 agagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacacttt 49811529  T
Q  426 ctcttt 431  Q
    ||||||    
T  49811528 ctcttt 49811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 427
Target Start/End: Complemental strand, 11152476 - 11152378
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    |||||||| ||||||||||| ||||||||||||| ||| || ||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| | ||||||||||||| ||  ||||||| || |||||||||||||||||| |||||||| |  ||||||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  427 tcttt 431  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 5959101 - 5958996
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||| ||||||||| |||  |||||| || ||||||||||||||| || ||||  ||||||||||||||| |||||||    
T  5959101 agagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 5959002  T
Q  426 ctcttt 431  Q
    ||||||    
T  5959001 ctcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 50591105 - 50590996
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||| |||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||    
T  50591105 aatttgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 50591006  T
Q  422 ctttctcttt 431  Q
    ||||||||||    
T  50591005 ctttctcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 45044661 - 45044556
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| |   ||||||||||||||| ||||||||||| ||  |||||||||||||| |||| ||| |||||||||||||| |||| |||    
T  45044661 agagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacatttt 45044562  T
Q  426 ctcttt 431  Q
    ||||||    
T  45044561 ctcttt 45044556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 13414791 - 13414865
Alignment:
Q  357 caatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||| ||| ||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 23597192 - 23597087
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| | ||||||||||||| ||  ||||| | || || ||||||||||||||| | ||||| ||||  |||||| ||||||||    
T  23597192 agagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttt 23597093  T
Q  426 ctcttt 431  Q
     |||||    
T  23597092 atcttt 23597087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 431
Target Start/End: Original strand, 26440741 - 26440838
Alignment:
Q  334 gatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||| ||||||| |||||| || ||||| ||| ||| ||| || |||||||||||||||||| | ||| |||| |||||| |||||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 3302633 - 3302533
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||| ||| ||||||||| |||||||    | |||| || ||||||||||||||||||| |||  ||||||||  ||||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  427 t 427  Q
    |    
T  3302533 t 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 41608593 - 41608489
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||| ||||||||||||||| |||  ||||||  | ||||||||||||||| || | ||  ||||||||| ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  427 tcttt 431  Q
    |||||    
T  41608493 tcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 431
Target Start/End: Original strand, 44453984 - 44454083
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||||| ||| ||||||||| | |  |||| | || ||||||||||||||| || || ||||||| ||| |||||||||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 37926540 - 37926434
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||||| | | ||||||||||||| | | ||| ||| || || ||||||||||||||| | ||| |||| |||| ||||| ||||||    
T  37926540 tagagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactt 37926441  T
Q  425 tctcttt 431  Q
    |||||||    
T  37926440 tctcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  370 gacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||||| ||||||||||||||| || |||||||||| |||||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 422
Target Start/End: Complemental strand, 44334229 - 44334175
Alignment:
Q  368 ttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 422  Q
    ||||||||| |||||||| ||||||||||||||| ||||||| |||||| |||||    
T  44334229 ttgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 6260870 - 6260970
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||| ||||| | |||||||||| |||| |||  |  ||| || || |||||||| ||| || ||||||||||||||||| ||||||| ||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  427 t 427  Q
    |    
T  6260970 t 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 47748443 - 47748546
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| | ||||||||||||||||| |||  |||||| ||  | |||||||||||| || | ||  |||| |||||||||| | ||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacacc-cttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  427 tcttt 431  Q
    |||||    
T  47748542 tcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 14547921 - 14548026
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14547921 agagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 14548020  T
Q  426 ctcttt 431  Q
    ||||||    
T  14548021 ctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 504221 - 504117
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  427 tcttt 431  Q
    |||||    
T  504121 tcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  427 tcttt 431  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  427 tcttt 431  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  427 tcttt 431  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  427 tcttt 431  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  427 tcttt 431  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 37038477 - 37038579
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||| | ||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||    
T  37038477 tagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 37038576  T
Q  425 tct 427  Q
    |||    
T  37038577 tct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||| || ||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  427 tcttt 431  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 5957831 - 5957934
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||||||||||||||||  |||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  428 cttt 431  Q
    ||||    
T  5957931 cttt 5957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 44507189 - 44507083
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||||||||||||||||||||||||||||| |||| ||  ||| ||| || |||||||||||||||||||||||||||||||||| ||||||| ||||    
T  44507189 tagagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactt 44507090  T
Q  425 tctcttt 431  Q
    |||||||    
T  44507089 tctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 10284732 - 10284627
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||||||||| ||| ||||| ||  ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10284732 agagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacacttt 10284633  T
Q  426 ctcttt 431  Q
    ||||||    
T  10284632 ctcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 15048281 - 15048178
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  427 tcttt 431  Q
    |||||    
T  15048182 tcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 8841513 - 8841428
Alignment:
Q  346 cccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||| || ||| ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 8841428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 431
Target Start/End: Complemental strand, 10621182 - 10621083
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||| |||||||||| |||| ||| ||||||| || |||||||||||||||||||| ||| | || ||||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 43414681 - 43414577
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| |||||| |||||| | ||| ||||||| || ||||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  427 tcttt 431  Q
    |||||    
T  43414581 tcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 16383376 - 16383481
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  16383376 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 16383475  T
Q  426 ctcttt 431  Q
    ||||||    
T  16383476 ctcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 9122196 - 9122289
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    |||||||||||||||||||||||||||||||||| |||          | ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacacc----------cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttct 9122285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 4854964 - 4854859
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||| ||| |  || |||||||||| | || | ||| ||||||| |||||||||||||||    
T  4854964 agagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacacttt 4854865  T
Q  426 ctcttt 431  Q
    ||||||    
T  4854864 ctcttt 4854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 34307215 - 34307320
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  || |||||||||||| |||||||    
T  34307215 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacacttt 34307314  T
Q  426 ctcttt 431  Q
    ||||||    
T  34307315 ctcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 30479574 - 30479470
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||||||||||||||||||| ||| |||||||||| || |||||||||||| || |  |  |||||| |||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  427 tcttt 431  Q
    |||||    
T  30479474 tcttt 30479470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 15259030 - 15258925
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||| || ||||| |||||||| | |  | ||||||| || |||||||||||| || ||||||||||||| ||||||||||| |||    
T  15259030 agagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacatttt 15258931  T
Q  426 ctcttt 431  Q
    ||||||    
T  15258930 ctcttt 15258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 24307894 - 24307789
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| | |  |||||| || ||||||||||||| | || | ||  ||||||||||||||| |||||||    
T  24307894 agagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacacttt 24307795  T
Q  426 ctcttt 431  Q
    ||||||    
T  24307794 ctcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggacccc 410  Q
    |||| ||||||||| |||||||||||||| ||||| ||   ||||||||| ||||||||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 431
Target Start/End: Original strand, 17443822 - 17443929
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||   || |||  | ||||||||||||||| ||||||| ||||||||| |||||  |||||    
T  17443822 ttagagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacact 17443921  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  17443922 ttctcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 32032723 - 32032828
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| ||||||||||||||||||| | |  ||||||||| ||||||||||||||| || | ||  |||| || ||||||| ||||||    
T  32032723 tagagttatgatacataaacacccttaggtggcaatacatc-cttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactt 32032821  T
Q  425 tctcttt 431  Q
    |||||||    
T  32032822 tctcttt 32032828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 42221514 - 42221619
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||| ||| ||||||||| ||||| |    | |||| || ||||||||||||||||||| |||  ||||||||  |||||||||||||    
T  42221514 agagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacacttt 42221613  T
Q  426 ctcttt 431  Q
    ||||||    
T  42221614 ctcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 20075034 - 20074938
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| ||||||||||||||| ||  ||||||| || || |||||| |||        ||||||||||| ||||||||||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactttc 20074943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 16056502 - 16056397
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||| ||| ||||| | |  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  16056502 agagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 16056403  T
Q  426 ctcttt 431  Q
    ||||||    
T  16056402 ctcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 24307628 - 24307692
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctga 390  Q
    ||||| |||||||||| ||||||||||||||||||| | |  |||||| || |||||||||||||    
T  24307628 agagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 9e-43; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  427 tcttt 431  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 18520981 - 18520880
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  430 tt 431  Q
    ||    
T  18520881 tt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 430
Target Start/End: Original strand, 13811651 - 13811755
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13811651 agagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 13811750  T
Q  426 ctctt 430  Q
    |||||    
T  13811751 ctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 324 - 431
Target Start/End: Original strand, 2740271 - 2740378
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    |||||||||||||||||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2740271 ttagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 2740370  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  2740371 ttctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 36733043 - 36732938
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  36733043 agagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacacttt 36732944  T
Q  426 ctcttt 431  Q
    ||||||    
T  36732943 ctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||| || ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  427 tcttt 431  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  427 tcttt 431  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 427
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||| || || |||||||||||||||||||||||||| |||||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  427 t 427  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 35943992 - 35943888
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  427 tcttt 431  Q
    |||||    
T  35943892 tcttt 35943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||  |||||||||||| ||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  427 tcttt 431  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||| || |||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  427 tcttt 431  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 324 - 431
Target Start/End: Original strand, 6679695 - 6679802
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    ||||||| |||||||||||||| | ||||||||||||| ||| ||||||| || |||||||||||||||||| ||||| |||||||||||||| |||| |    
T  6679695 ttagagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatt 6679794  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  6679795 ttctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 15409711 - 15409606
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| ||||||||| ||||| |   ||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||| |    
T  15409711 agagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactct 15409612  T
Q  426 ctcttt 431  Q
    ||||||    
T  15409611 ctcttt 15409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 3921366 - 3921261
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  3921366 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 3921267  T
Q  426 ctcttt 431  Q
    ||||||    
T  3921266 ctcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 418
Target Start/End: Complemental strand, 41470522 - 41470425
Alignment:
Q  321 taattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagc 418  Q
    ||||||||||||| ||||||||||||| ||||||||||||| | | ||| | || |  | ||||||||||||||||||||||||||||||||||||||    
T  41470522 taattagagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 26720516 - 26720620
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||| ||| |  || ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  427 tcttt 431  Q
    |||||    
T  26720616 tcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 26990265 - 26990369
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||| ||| |  || ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  427 tcttt 431  Q
    |||||    
T  26990365 tcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 431
Target Start/End: Complemental strand, 36875702 - 36875608
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||         |||||||||||| ||||||||||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttct 36875612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 2252270 - 2252164
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| ||| ||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  2252270 tagagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 2252171  T
Q  425 tctcttt 431  Q
    |||||||    
T  2252170 tctcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 31008987 - 31009088
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||||||| ||||| |   ||  ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31008987 agagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 31009086  T
Q  426 ct 427  Q
    ||    
T  31009087 ct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 431
Target Start/End: Original strand, 31132390 - 31132448
Alignment:
Q  373 atccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  31132390 atccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttt 31132448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 6260106 - 6259997
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||| ||||||||||||||| ||| || |||||| ||||| ||| ||| ||| || | ||||||||| |||| | ||||| |||||| | || |||||||    
T  6260106 aatttgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcaca 6260007  T
Q  422 ctttctcttt 431  Q
    ||||||||||    
T  6260006 ctttctcttt 6259997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 39688998 - 39688893
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||| ||||||||| | |  |||||| || ||||||||||||| | || ||||  || |||||||| ||| |||||||    
T  39688998 agagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacacttt 39688899  T
Q  426 ctcttt 431  Q
    ||||||    
T  39688898 ctcttt 39688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 33825424 - 33825320
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||| ||||||||  |||||||||||||| ||   |||||| || || |||||||||||||||  ||| ||| |||   |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  427 tcttt 431  Q
    |||||    
T  33825324 tcttt 33825320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 21370057 - 21370108
Alignment:
Q  380 caaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||| || |||||||||||||||||||| |||| |||||||||    
T  21370057 caaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctcttt 21370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 431
Target Start/End: Complemental strand, 39557594 - 39557513
Alignment:
Q  350 taggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||| |||| |||  || |||||| ||||||||||||||||||  |||| ||||||||  |||| ||||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttt 39557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 427
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||| ||||||| | |||| || ||||| ||| |||||||  | || ||||||||  |||||   ||||||||||| ||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  427 t 427  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 16327902 - 16328005
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    |||||||||| ||| | | ||||||||||||||| | |  |||||| || || |||||||||||||||  ||| ||| ||| | |||||||||||||| |    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttttt 16328001  T
Q  428 cttt 431  Q
    ||||    
T  16328002 cttt 16328005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 428
Target Start/End: Original strand, 38296202 - 38296304
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||   |||||||| ||||| |||  || | | || |||||||||| |||||||||  ||||||| ||  ||||||||||||||    
T  38296202 agagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacacttt 38296301  T
Q  426 ctc 428  Q
    |||    
T  38296302 ctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 9e-43; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  427 tcttt 431  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  427 tcttt 431  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 49607413 - 49607518
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  49607413 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacacttt 49607512  T
Q  426 ctcttt 431  Q
    ||||||    
T  49607513 ctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 54868996 - 54868891
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  54868996 agagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 54868897  T
Q  426 ctcttt 431  Q
    ||||||    
T  54868896 ctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 332 - 431
Target Start/End: Original strand, 52629305 - 52629404
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 17470403 - 17470509
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||| ||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17470403 tagagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 17470502  T
Q  425 tctcttt 431  Q
    |||||||    
T  17470503 tctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 8076393 - 8076497
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||| |||||||||||||||| || ||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  427 tcttt 431  Q
    |||||    
T  8076493 tcttt 8076497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 326 - 430
Target Start/End: Complemental strand, 27714992 - 27714888
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||| |||||||| |||| ||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27714992 agagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 27714893  T
Q  426 ctctt 430  Q
    |||||    
T  27714892 ctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 31456690 - 31456793
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||||||||||||||||||| |||| ||||||| ||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  428 cttt 431  Q
    ||||    
T  31456790 cttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 11095454 - 11095351
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||  |||||||| || ||||||||    
T  11095454 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacacttt 11095357  T
Q  426 ctcttt 431  Q
    ||||||    
T  11095356 ctcttt 11095351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||| ||| || |||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  427 tcttt 431  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 48587187 - 48587087
Alignment:
Q  331 aatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 430  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||| |  || |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  431 t 431  Q
    |    
T  48587087 t 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 431
Target Start/End: Original strand, 26754700 - 26754799
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||| |||||||||||||||||||||||| ||| || ||||||| ||||||||||||||| || ||||| ||||||||||||||||||| |||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 33118952 - 33118847
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||||||||||||| ||||| ||| ||||||| || ||||||||| ||||||||||||||||||| ||| || || ||||||||    
T  33118952 agagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacacttt 33118853  T
Q  426 ctcttt 431  Q
    ||||||    
T  33118852 ctcttt 33118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 36707525 - 36707424
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||| ||||||| |||||    |||||||||    
T  36707525 agagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc----gcacacttt 36707430  T
Q  426 ctcttt 431  Q
    ||||||    
T  36707429 ctcttt 36707424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 11348023 - 11347918
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| ||||||||| ||||| | | |||||||||| |||||||||||||||||| | ||| ||||||| ||| |||||||||||    
T  11348023 agagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacacttt 11347924  T
Q  426 ctcttt 431  Q
    ||||||    
T  11347923 ctcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 41189865 - 41189760
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||| ||||||||||||||| | ||||||||| || || |||||| |||||||| | ||| |||||||||||||||||||||||    
T  41189865 agagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacacttt 41189766  T
Q  426 ctcttt 431  Q
    ||||||    
T  41189765 ctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 324 - 431
Target Start/End: Complemental strand, 24700057 - 24699950
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 423  Q
    |||||||||||||||||||||| |||||| |||||||| ||| ||||||| || || ||||||||| ||||| | ||||||||||| | |||| ||||||    
T  24700057 ttagagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacact 24699958  T
Q  424 ttctcttt 431  Q
    ||||||||    
T  24699957 ttctcttt 24699950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 35536624 - 35536730
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||| || || |||||| |||||||| |||| |||||||   |||||||||||||    
T  35536624 tagagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacactt 35536723  T
Q  425 tctcttt 431  Q
     ||||||    
T  35536724 cctcttt 35536730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 9562997 - 9563101
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||| ||||| |||| || ||||| | | ||||||||||  | |||||||||||||||||||||||||| || |||||| |||||||    
T  9562997 tagagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactt 9563096  T
Q  425 tctct 429  Q
    |||||    
T  9563097 tctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||| || || |||||||||||| ||  ||| ||||||| | |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  427 tcttt 431  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| |||||| |||||||| ||| ||| |||||| ||||| |||||||||||| | ||  || |||||||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  427 tcttt 431  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 20765015 - 20764911
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||| ||||||||| |||||||||| |||| ||  ||| ||| || |||||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  427 tcttt 431  Q
    |||||    
T  20764915 tcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 30801829 - 30801729
Alignment:
Q  331 aatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 430  Q
    |||||||||||||||||||||||||  |||| ||| ||||| | || ||||||||| ||||| |||||||  |||||||| |||||||||| ||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctt 30801730  T
Q  431 t 431  Q
    |    
T  30801729 t 30801729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 51419460 - 51419356
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| |||||| || ||||| | | ||| ||| || |||||||||||||||||| | ||| | ||||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  427 tcttt 431  Q
    |||||    
T  51419360 tcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 431
Target Start/End: Complemental strand, 13898154 - 13898051
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    |||||||||| ||| ||| ||||||||||||||| |||  |||||| || || |||||||||||||||  ||| ||||||| | ||||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  428 cttt 431  Q
    ||||    
T  13898054 cttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 8956760 - 8956866
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||| ||||| ||||||||| | | ||||||| || || |||||| ||||||||  ||| |||||||   |||||||||||||    
T  8956760 tagagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacactt 8956859  T
Q  425 tctcttt 431  Q
     ||||||    
T  8956860 cctcttt 8956866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 48375808 - 48375702
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| ||||| |||||||||||||||||| ||||| |||  |  | ||||  |||||||||||||  || ||||| ||||||||||||||||||| ||    
T  48375808 tagagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattt 48375709  T
Q  425 tctcttt 431  Q
    |||||||    
T  48375708 tctcttt 48375702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 11907370 - 11907475
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||||||||||||| ||||| ||   |  |||  | ||||||||||||||| || ||||  ||||||||||||||||||| |||    
T  11907370 agagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacatttt 11907469  T
Q  426 ctcttt 431  Q
    ||||||    
T  11907470 ctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 430
Target Start/End: Original strand, 35093592 - 35093688
Alignment:
Q  334 gatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 430  Q
    |||||||||||| | ||||||| ||||| | |||||||||||| | ||||||||||||| || |||| ||| || ||  ||||||||||||||||||    
T  35093592 gatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactttctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 45058652 - 45058549
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||||||||||||||||||| |||  |||||| || || |||||||||||| ||   ||  ||||||||||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacacc-cttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  427 tcttt 431  Q
    |||||    
T  45058553 tcttt 45058549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 25407245 - 25407143
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcac-aaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 428  Q
    |||||||||||| ||| || ||||||||||||||||  ||||||  | ||| |||||||||||||||  |||  |||| ||| ||||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  429 ttt 431  Q
    |||    
T  25407145 ttt 25407143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 431
Target Start/End: Complemental strand, 36331407 - 36331325
Alignment:
Q  349 ttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||||  |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 389
Target Start/End: Complemental strand, 36331481 - 36331416
Alignment:
Q  324 ttagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctg 389  Q
    ||||||| |||||||||| |||||||||| |||||||  |||  ||||||||| ||||||||||||    
T  36331481 ttagagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 41080709 - 41080811
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| ||||| || |||| | ||| ||||||| || | ||||||||||| | || |||| ||||| ||| |||||||||| ||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  427 tcttt 431  Q
    |||||    
T  41080807 tcttt 41080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 361
Target Start/End: Complemental strand, 21746288 - 21746249
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaata 361  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  21746288 aattagagtaatgatacatatacatccttaggtggcaata 21746249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 39670019 - 39670115
Alignment:
Q  335 atacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||||| ||||| ||||||||||| |  ||||||||   | |||||| ||||||||  ||| ||||||| || ||| |||||||| ||||||    
T  39670019 atacatagacatccttatgtggcaatatatcccttgacatctatataaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttt 39670115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 6e-41; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 7389388 - 7389493
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7389388 agagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 7389487  T
Q  426 ctcttt 431  Q
    ||||||    
T  7389488 ctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 36362015 - 36361909
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  36362015 tagagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36361916  T
Q  425 tctcttt 431  Q
    |||||||    
T  36361915 tctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 8080484 - 8080379
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |  || |||||||||||||||||||||||||||||||||||||||||||||    
T  8080484 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 8080385  T
Q  426 ctcttt 431  Q
    ||||||    
T  8080384 ctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  427 tcttt 431  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||| ||| ||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  427 tcttt 431  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 3434560 - 3434666
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||    
T  3434560 tagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactt 3434659  T
Q  425 tctcttt 431  Q
    |||||||    
T  3434660 tctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 36362024 - 36362130
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||||||||||||||||||||||||||||| |||| | | ||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  36362024 tagagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactt 36362123  T
Q  425 tctcttt 431  Q
    |||||||    
T  36362124 tctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 330 - 431
Target Start/End: Original strand, 3783998 - 3784099
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||||||||||||||||||| | | ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  430 tt 431  Q
    ||    
T  3784098 tt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 38837216 - 38837321
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| ||| ||  ||| |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38837216 agagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38837315  T
Q  426 ctcttt 431  Q
    ||||||    
T  38837316 ctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 4999614 - 4999510
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  427 tcttt 431  Q
    |||||    
T  4999514 tcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 35137533 - 35137637
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||| || ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  427 tcttt 431  Q
    |||||    
T  35137633 tcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 19436288 - 19436183
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| ||||||||| ||||| ||| ||||||| || ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19436288 agagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacacttt 19436189  T
Q  426 ctcttt 431  Q
    ||||||    
T  19436188 ctcttt 19436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 40957706 - 40957811
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||||||||||||||||| |||||||||||||| ||  ||||| | || ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  40957706 agagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacacttt 40957805  T
Q  426 ctcttt 431  Q
    ||||||    
T  40957806 ctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 328 - 431
Target Start/End: Complemental strand, 32951592 - 32951489
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||||||||||||||||| ||||| || ||||| | | ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  428 cttt 431  Q
    ||||    
T  32951492 cttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 330 - 431
Target Start/End: Original strand, 3694370 - 3694471
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||| ||| ||||||||||||| ||||| ||| ||| ||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T
Q  430 tt 431  Q
    ||    
T  3694470 tt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 38044196 - 38044301
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  ||||||||| ||||||||||||||| |||| ||  ||||||||||||||| |||||||    
T  38044196 agagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacacttt 38044295  T
Q  426 ctcttt 431  Q
    ||||||    
T  38044296 ctcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 8238212 - 8238317
Alignment:
Q  327 gagtaatgatacatagacaccct-taggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||| |||||||||| ||||||| |||||||||||| ||| ||||||| || ||||||||||||||| |||||||  ||||||||||||||| |||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T
Q  426 ctcttt 431  Q
    ||||||    
T  8238312 ctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 431
Target Start/End: Original strand, 35522881 - 35522980
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||||||| ||||| ||||||||| ||||||| ||| || |||||||||||||||||| | ||  |||| ||||||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 430
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||| ||||| ||| |||||||  | ||||||||| |||||||||| ||| || |||||||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  427 tctt 430  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 11044187 - 11044282
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| | | ||||||| ||          ||||||||||||||||||||||||||||||| |||||||    
T  11044187 agagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacacttt 11044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 22343359 - 22343465
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| ||   ||  ||||||||||||||| ||||||    
T  22343359 tagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 22343458  T
Q  425 tctcttt 431  Q
    |||||||    
T  22343459 tctcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 26296642 - 26296748
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||||||| ||||||||| ||||||||| ||| |||||| || |||||||||| |||| | ||  |||||||||||||||| || ||    
T  26296642 tagagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattt 26296741  T
Q  425 tctcttt 431  Q
    |||||||    
T  26296742 tctcttt 26296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 41915739 - 41915845
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||| ||||||||||||||||||| |||  |||||| |  ||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  41915739 tagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 41915838  T
Q  425 tctcttt 431  Q
    |||||||    
T  41915839 tctcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 421
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||| |||||||||||||| ||||||||||||| | ||| ||| ||| || |||||||||||||||||| | ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 18207179 - 18207283
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| ||||||||||||||| |||  |||||| ||  |||||||||| |||||| | |||||| ||||| ||||||||||||||    
T  18207179 agagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacacttt 18207277  T
Q  426 ctcttt 431  Q
    ||||||    
T  18207278 ctcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 36208172 - 36208277
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| ||||||||||||||||||||||||| |||| |    |||||| || |||||||| |||||| || ||||||||||||| ||||||||||| |||    
T  36208172 agagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacatttt 36208271  T
Q  426 ctcttt 431  Q
    ||||||    
T  36208272 ctcttt 36208277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 39256023 - 39255920
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| ||||||||||||||| |||| |||| | ||  ||||||||||||||||| | ||||||||| || |||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  427 tcttt 431  Q
    |||||    
T  39255924 tcttt 39255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 40846213 - 40846109
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||| ||||||||||||||| |||  ||||||||| ||||||||||| ||| ||||| |  ||||||||||||||  ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  427 tcttt 431  Q
    |||||    
T  40846113 tcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 427
Target Start/End: Original strand, 7727905 - 7728006
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| |||||||||||||| |||| |||  ||||||| | || |||||||||||| || ||||  ||||||||||||||| |||||||    
T  7727905 agagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacacttt 7728004  T
Q  426 ct 427  Q
    ||    
T  7728005 ct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 46033903 - 46033797
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||||| |  |||||||||||||| ||| ||| ||| || || ||||||||||||||| ||||| || || ||||||||||| | ||    
T  46033903 tagagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattt 46033804  T
Q  425 tctcttt 431  Q
    |||||||    
T  46033803 tctcttt 46033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 10343664 - 10343559
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||||||||||||||||||||||||||| |||| ||   |||||| || |||||||||||||||| |  |  ||||||| | ||| | |||||||||    
T  10343664 agagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacacatgtttccgtggactctgcagacgcacacttt 10343565  T
Q  426 ctcttt 431  Q
    ||||||    
T  10343564 ctcttt 10343559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 35468956 - 35468851
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||| |||||| |||||||| | ||||||||| || || |||||||| | | ||   || |||||||| |||||| ||||||||    
T  35468956 agagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacacttt 35468857  T
Q  426 ctcttt 431  Q
    ||||||    
T  35468856 ctcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 12310904 - 12311008
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| ||||||||||||||||||||||||| |||||| |  | || ||||  |||||||||||||| || |||||||||| || | ||||||||| ||    
T  12310904 tagagttatgatacatagacacccttaggtggaaatatatc--tggatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcacattt 12311001  T
Q  425 tctcttt 431  Q
    | |||||    
T  12311002 tatcttt 12311008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 431
Target Start/End: Complemental strand, 16374883 - 16374820
Alignment:
Q  368 ttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||||| |||||||||||||||||| |||||||||| | | ||||||||||| ||||||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctcttt 16374820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 32564526 - 32564422
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||| || ||||||||||||||| || |  |  ||||||||||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  427 tcttt 431  Q
    |||||    
T  32564426 tcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 431
Target Start/End: Complemental strand, 2318338 - 2318239
Alignment:
Q  332 atgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||||  ||| || |||||||||| | |||  |||||| || ||||||||||||||  || |||||||||||||  || ||||| |||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 41423682 - 41423786
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||||||| | |||| ||| |||| |||  ||||||    ||||||||||||||| || ||||||| || |||| ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  427 tcttt 431  Q
    |||||    
T  41423782 tcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 32869678 - 32869782
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  427 tcttt 431  Q
    |||||    
T  32869778 tcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 22880755 - 22880654
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  430 tt 431  Q
    ||    
T  22880655 tt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 17598554 - 17598658
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||||||||||||||||| | | ||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  427 tcttt 431  Q
    |||||    
T  17598654 tcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 6209566 - 6209461
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||  | |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  6209566 agagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacacttt 6209467  T
Q  426 ctcttt 431  Q
    ||||||    
T  6209466 ctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 11427614 - 11427722
Alignment:
Q  325 tagagtaatgatacatagacaccct--taggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 422  Q
    |||||||||||||||||||||||||  |||||||||||| | | ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||    
T  11427614 tagagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 11427713  T
Q  423 tttctcttt 431  Q
    |||||||||    
T  11427714 tttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 31109500 - 31109396
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||  ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttc 31109401  T
Q  427 tcttt 431  Q
    |||||    
T  31109400 tcttt 31109396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 31976246 - 31976352
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 424  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||| ||| || |||||||||||||||||| ||||| || |||||||||||||||||||    
T  31976246 tagagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactt 31976345  T
Q  425 tctcttt 431  Q
    |||||||    
T  31976346 tctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 29857827 - 29857931
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||| ||| || ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  427 tcttt 431  Q
    |||||    
T  29857927 tcttt 29857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 31110860 - 31110757
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||| ||||||||||||||| ||| |||||||  | |||||||||||||||||||  ||| ||||||| |||||||||||||||    
T  31110860 agagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacacttt 31110763  T
Q  426 ctcttt 431  Q
    ||||||    
T  31110762 ctcttt 31110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 15832576 - 15832681
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    |||||||||||||||||||||| ||||||| ||||| | ||||||||| || ||||||||| ||||||||||||||||||| || ||||||  ||| |||    
T  15832576 agagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacatttt 15832675  T
Q  426 ctcttt 431  Q
    ||||||    
T  15832676 ctcttt 15832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 15990143 - 15990038
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  15990143 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15990044  T
Q  426 ctcttt 431  Q
    ||||||    
T  15990043 ctcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 23128224 - 23128123
Alignment:
Q  330 taatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 429  Q
    |||||||| ||||||||| ||| |||  |||| | | ||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctct 23128125  T
Q  430 tt 431  Q
    ||    
T  23128124 tt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 30341461 - 30341356
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  30341461 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 30341362  T
Q  426 ctcttt 431  Q
    ||||||    
T  30341361 ctcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 15508124 - 15508020
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| |||||||||| ||||||||||||||||||| |||  |||||| || ||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  427 tcttt 431  Q
    |||||    
T  15508024 tcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 28536582 - 28536484
Alignment:
Q  331 aatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 430  Q
    ||||||||||| ||| ||||||||||||||| | |  |||||| || |||||||||||||||||  |||| ||||||||| |||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 31953130 - 31953026
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||| ||||||| ||||||||||||||| |||  |||||| || || |||||||||||| ||  ||| ||||||| | ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  427 tcttt 431  Q
    |||||    
T  31953030 tcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 4231548 - 4231652
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    |||| ||||| |||| ||| | ||||||||||||| |||  ||| || || |||||||||||||||||| | ||  ||||||||||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  427 tcttt 431  Q
    |||||    
T  4231648 tcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 431
Target Start/End: Original strand, 946377 - 946480
Alignment:
Q  328 agtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 427  Q
    ||||| |||||||||||| |||||||||  |||| ||| ||||||| |  | |||||||||||||| |||||||||  | ||||| | ||||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttct 946476  T
Q  428 cttt 431  Q
    ||||    
T  946477 cttt 946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 431
Target Start/End: Original strand, 12732481 - 12732586
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||||||||||||||||||  |||| |||||||||||    |||||| || |||||||||||||||||| |  | ||||| ||| || ||||||| |||    
T  12732481 agagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacatttt 12732580  T
Q  426 ctcttt 431  Q
    ||||||    
T  12732581 ctcttt 12732586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 22422120 - 22422084
Alignment:
Q  325 tagagtaatgatacatagacacccttaggtggcaata 361  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22422120 tagagtaatgatacatagacatccttaggtggcaata 22422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 30870068 - 30870118
Alignment:
Q  381 aaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||| ||| || ||||| ||||||||||||||||||| |||||||||    
T  30870068 aaaaatctaacatgtggtcacatggaccccgcacaagcacattttctcttt 30870118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 10210 - 10105
Alignment:
Q  326 agagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 425  Q
    ||||| |||||||||||||||| ||||||||||||| | | |||||||||| || |||||||||||||||||||||||||||| || |||||||||||||    
T  10210 agagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacacttt 10111  T
Q  426 ctcttt 431  Q
    ||||||    
T  10110 ctcttt 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 1029 - 925
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| | ||||||||||||| ||| ||| |||||| |||||||| |||||||||||||||||| | |||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  427 tcttt 431  Q
    |||||    
T  929 tcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 327 - 431
Target Start/End: Complemental strand, 1029 - 925
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||| | ||||||||||||| ||| ||| |||||| |||||||| |||||||||||||||||| | |||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  427 tcttt 431  Q
    |||||    
T  929 tcttt 925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 431
Target Start/End: Original strand, 4029 - 4133
Alignment:
Q  327 gagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 426  Q
    ||||||||||||||||||||| |||| |||||||| ||| ||| ||| || ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  427 tcttt 431  Q
    |||||    
T  4129 tcttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 8968 - 8859
Alignment:
Q  322 aattagagtaatgatacatagacacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 421  Q
    |||| |||| |||||| ||||||| ||||| ||| ||||| || ||||||||||  ||||||||| |||||| |||||||||||||||| |||||| |||    
T  8968 aatttgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtaca 8869  T
Q  422 ctttctcttt 431  Q
     |||||||||    
T  8868 ttttctcttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 17097 - 17158
Alignment:
Q  370 gacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||||||||| |||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 431
Target Start/End: Original strand, 152514 - 152602
Alignment:
Q  343 acacccttaggtggcaatataccatttgacatccgcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 431  Q
    |||||||| |||||||||| |||  |||||| || ||||||||||||||| || ||||  |||| |||||||||  |||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University