View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_low_30 (Length: 407)
Name: NF7636_low_30
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 23 - 398
Target Start/End: Original strand, 56277264 - 56277642
Alignment:
| Q |
23 |
tgaggaggggtctctgaacagagacgtaatctctcatattctcacacgcgttccggccaagcctttgcttagcatgaaatgcatttccagagggtggaac |
122 |
Q |
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| T |
56277264 |
tgaggagggttctctcaacagagacgtcatctctcatattctcacacgcgttccggccaaacctttgcttagcatgaaatgcatttccagaggttggaac |
56277363 |
T |
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| Q |
123 |
aacatcatttcaagccgttcattcatcaaagatcaactcaaaaacactaatcttgttttaaatgcttttattgttcaagataggtacatgttctgcaaac |
222 |
Q |
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| T |
56277364 |
cacatcatttcaagccgttcattcatcaaagatcaactcaaaaacacaaatcttgttttaaatggttttattgttcaagataggtacatgttctgcaaac |
56277463 |
T |
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| Q |
223 |
acgatgttaaaaccattagttacattcctgtccaacccaaa---aacgctgctaaactagttgttcaccacaatgttttttcttttcttcctcaagatgt |
319 |
Q |
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| T |
56277464 |
acgatgttaaaaccattagttacattcctgtggaacccaaaaacaacgctgctaaactagttgttcaccacaatgttttttcttttcttcctcaagatgt |
56277563 |
T |
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| Q |
320 |
tgtgcttttgtcatcttgtaaaggaattctttgctgccgtacctgttttccttccccaaatccaaccatctatctctgc |
398 |
Q |
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| T |
56277564 |
tgttgttttggcttcctgtaaaggaattgtttgctgccgtacctgttttccttccccaaatccaaccatctatctctgc |
56277642 |
T |
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