View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_low_4 (Length: 666)

Name: NF7636_low_4
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_low_4
NF7636_low_4
[»] chr2 (46 HSPs)
chr2 (19-597)||(4342276-4342864)
chr2 (420-551)||(4360211-4360342)
chr2 (21-118)||(33532756-33532853)
chr2 (21-120)||(10862078-10862177)
chr2 (30-120)||(10861863-10861953)
chr2 (48-117)||(4506087-4506156)
chr2 (37-117)||(11350223-11350304)
chr2 (21-120)||(39420681-39420781)
chr2 (30-120)||(28193604-28193694)
chr2 (37-117)||(11349829-11349910)
chr2 (30-119)||(28193364-28193453)
chr2 (21-120)||(15962177-15962277)
chr2 (30-120)||(936796-936887)
chr2 (37-103)||(3976507-3976573)
chr2 (21-103)||(3977023-3977105)
chr2 (44-117)||(14280267-14280341)
chr2 (30-120)||(14288906-14288996)
chr2 (37-103)||(43169244-43169310)
chr2 (21-120)||(15961820-15961920)
chr2 (30-120)||(10862291-10862381)
chr2 (37-103)||(11969054-11969120)
chr2 (37-103)||(21213921-21213987)
chr2 (37-103)||(23054328-23054394)
chr2 (37-103)||(30166115-30166181)
chr2 (48-117)||(32810923-32810993)
chr2 (21-121)||(36161367-36161468)
chr2 (37-102)||(43195787-43195852)
chr2 (21-103)||(17509111-17509193)
chr2 (37-103)||(21214237-21214303)
chr2 (37-103)||(25441698-25441764)
chr2 (21-102)||(17325173-17325254)
chr2 (67-120)||(32196895-32196948)
chr2 (37-101)||(42768370-42768432)
chr2 (39-103)||(3976193-3976257)
chr2 (21-97)||(12432113-12432189)
chr2 (48-103)||(6183413-6183468)
chr2 (44-103)||(18901907-18901966)
chr2 (21-96)||(27545136-27545211)
chr2 (37-103)||(7877846-7877912)
chr2 (21-103)||(15061285-15061367)
chr2 (48-118)||(44266355-44266425)
chr2 (67-120)||(17326097-17326150)
chr2 (39-100)||(39596744-39596805)
chr2 (45-97)||(883645-883697)
chr2 (21-97)||(3435506-3435582)
chr2 (45-97)||(6986460-6986512)
[»] chr8 (27 HSPs)
chr8 (30-117)||(15711484-15711571)
chr8 (30-120)||(9596022-9596112)
chr8 (21-120)||(35908663-35908762)
chr8 (30-118)||(9596248-9596336)
chr8 (30-120)||(18464054-18464145)
chr8 (48-118)||(38287784-38287854)
chr8 (37-117)||(14019795-14019876)
chr8 (21-103)||(21085168-21085250)
chr8 (21-120)||(8605475-8605574)
chr8 (30-120)||(17607243-17607333)
chr8 (37-103)||(18905858-18905924)
chr8 (37-103)||(32931403-32931469)
chr8 (44-103)||(23027548-23027607)
chr8 (21-103)||(8276551-8276633)
chr8 (51-120)||(20232447-20232517)
chr8 (21-103)||(20298536-20298618)
chr8 (37-103)||(23027864-23027930)
chr8 (37-103)||(34248079-34248145)
chr8 (45-97)||(35561674-35561726)
chr8 (21-117)||(38287984-38288080)
chr8 (37-117)||(39587894-39587973)
chr8 (44-103)||(21653329-21653388)
chr8 (37-103)||(21653806-21653872)
chr8 (37-103)||(34248361-34248427)
chr8 (45-89)||(3183955-3183999)
chr8 (45-97)||(5720911-5720963)
chr8 (45-97)||(43599319-43599371)
[»] chr7 (45 HSPs)
chr7 (30-120)||(39550007-39550097)
chr7 (21-120)||(34748762-34748862)
chr7 (30-120)||(36270499-36270589)
chr7 (21-117)||(27585243-27585340)
chr7 (21-120)||(36495873-36495973)
chr7 (28-112)||(22206305-22206389)
chr7 (28-112)||(22228350-22228434)
chr7 (21-117)||(36092619-36092714)
chr7 (21-120)||(37755958-37756058)
chr7 (21-120)||(37756184-37756284)
chr7 (21-120)||(37761932-37762032)
chr7 (21-120)||(47346114-47346214)
chr7 (21-120)||(47346343-47346443)
chr7 (21-119)||(33909122-33909221)
chr7 (30-120)||(19843692-19843782)
chr7 (21-103)||(41670585-41670667)
chr7 (37-103)||(43384316-43384382)
chr7 (21-120)||(36270717-36270817)
chr7 (37-120)||(36495650-36495734)
chr7 (37-103)||(257303-257369)
chr7 (37-103)||(1661227-1661293)
chr7 (30-120)||(19843469-19843558)
chr7 (21-107)||(34914940-34915026)
chr7 (39-120)||(20296248-20296329)
chr7 (38-103)||(37530960-37531025)
chr7 (76-120)||(27729553-27729597)
chr7 (37-103)||(7135279-7135345)
chr7 (45-103)||(43167937-43167995)
chr7 (51-120)||(44314354-44314424)
chr7 (37-103)||(1663640-1663707)
chr7 (30-85)||(14991538-14991593)
chr7 (30-85)||(15421149-15421204)
chr7 (37-100)||(40121975-40122038)
chr7 (21-120)||(22686751-22686852)
chr7 (37-103)||(37272081-37272147)
chr7 (37-103)||(40121654-40121720)
chr7 (38-97)||(6813115-6813174)
chr7 (60-107)||(24240237-24240284)
chr7 (37-116)||(36092428-36092506)
chr7 (37-103)||(28910034-28910100)
chr7 (60-120)||(24240449-24240510)
chr7 (38-103)||(43288266-43288331)
chr7 (37-97)||(6751745-6751805)
chr7 (21-89)||(9379016-9379084)
chr7 (44-100)||(43383989-43384045)
[»] chr1 (39 HSPs)
chr1 (21-118)||(12287835-12287932)
chr1 (21-120)||(17294962-17295062)
chr1 (21-120)||(45443205-45443304)
chr1 (30-117)||(18585026-18585113)
chr1 (30-120)||(45858640-45858730)
chr1 (30-120)||(29228659-29228750)
chr1 (37-103)||(19937079-19937145)
chr1 (21-117)||(51722240-51722338)
chr1 (21-117)||(27958067-27958163)
chr1 (21-120)||(29228432-29228532)
chr1 (21-120)||(33562147-33562247)
chr1 (44-117)||(28509430-28509506)
chr1 (21-118)||(31411580-31411678)
chr1 (21-120)||(4187534-4187633)
chr1 (35-103)||(40642810-40642878)
chr1 (37-103)||(2697367-2697433)
chr1 (37-103)||(4022161-4022227)
chr1 (37-103)||(17419789-17419855)
chr1 (30-120)||(29383652-29383742)
chr1 (37-104)||(38474284-38474351)
chr1 (22-120)||(40521513-40521612)
chr1 (37-103)||(8520129-8520195)
chr1 (37-103)||(31305713-31305779)
chr1 (69-120)||(17294851-17294903)
chr1 (48-107)||(30604507-30604566)
chr1 (55-120)||(4187336-4187402)
chr1 (21-103)||(33879798-33879880)
chr1 (21-103)||(33964375-33964457)
chr1 (37-103)||(43423281-43423347)
chr1 (21-118)||(27957829-27957926)
chr1 (68-120)||(45858864-45858916)
chr1 (37-103)||(20735524-20735590)
chr1 (68-116)||(31411425-31411474)
chr1 (68-116)||(20208149-20208196)
chr1 (68-116)||(20208448-20208495)
chr1 (564-608)||(30745523-30745566)
chr1 (564-608)||(30766974-30767017)
chr1 (45-97)||(39649128-39649180)
chr1 (39-103)||(40664212-40664276)
[»] chr5 (30 HSPs)
chr5 (37-120)||(22196362-22196445)
chr5 (21-118)||(84054-84152)
chr5 (21-120)||(32395334-32395434)
chr5 (21-120)||(22196573-22196672)
chr5 (21-117)||(2471713-2471809)
chr5 (21-120)||(19439845-19439944)
chr5 (30-120)||(30329820-30329911)
chr5 (21-103)||(1028113-1028195)
chr5 (44-120)||(83853-83930)
chr5 (21-120)||(29396363-29396463)
chr5 (21-120)||(14769852-14769951)
chr5 (21-107)||(24792287-24792372)
chr5 (37-103)||(28010152-28010218)
chr5 (60-120)||(33040269-33040330)
chr5 (45-103)||(37995678-37995736)
chr5 (67-120)||(18541935-18541988)
chr5 (60-120)||(33040454-33040515)
chr5 (44-103)||(13844015-13844074)
chr5 (44-103)||(28009840-28009899)
chr5 (44-103)||(30588059-30588118)
chr5 (48-103)||(38131766-38131821)
chr5 (46-117)||(39668462-39668532)
chr5 (45-103)||(873740-873798)
chr5 (37-103)||(13843699-13843765)
chr5 (38-120)||(18541708-18541789)
chr5 (37-103)||(27760077-27760143)
chr5 (21-102)||(30330064-30330145)
chr5 (49-120)||(5095944-5096016)
chr5 (37-107)||(33040061-33040131)
chr5 (45-97)||(35527032-35527084)
[»] chr6 (21 HSPs)
chr6 (21-117)||(26842707-26842804)
chr6 (21-120)||(33396291-33396391)
chr6 (39-103)||(21067095-21067159)
chr6 (39-103)||(21088886-21088950)
chr6 (37-103)||(8144019-8144085)
chr6 (37-103)||(10418374-10418440)
chr6 (44-120)||(33396510-33396586)
chr6 (39-103)||(21043819-21043883)
chr6 (37-103)||(24055145-24055211)
chr6 (30-116)||(27443566-27443651)
chr6 (44-117)||(26339885-26339958)
chr6 (30-120)||(8427535-8427625)
chr6 (21-99)||(12134503-12134581)
chr6 (49-107)||(25184208-25184266)
chr6 (21-117)||(25183990-25184087)
chr6 (21-88)||(19712629-19712696)
chr6 (37-99)||(1744878-1744940)
chr6 (37-99)||(19054499-19054561)
chr6 (37-97)||(11317056-11317116)
chr6 (48-120)||(13673840-13673912)
chr6 (48-120)||(16194005-16194077)
[»] chr4 (38 HSPs)
chr4 (21-117)||(46528943-46529039)
chr4 (37-120)||(33912028-33912111)
chr4 (21-120)||(26941846-26941945)
chr4 (21-116)||(37097751-37097846)
chr4 (45-121)||(4026057-4026133)
chr4 (21-120)||(11290153-11290253)
chr4 (44-120)||(52810895-52810971)
chr4 (21-107)||(50868033-50868119)
chr4 (37-118)||(2016519-2016600)
chr4 (37-103)||(29669399-29669465)
chr4 (37-103)||(51469483-51469549)
chr4 (30-120)||(52810654-52810744)
chr4 (37-103)||(53740184-53740250)
chr4 (48-117)||(37288916-37288985)
chr4 (38-103)||(53739868-53739933)
chr4 (37-103)||(15665155-15665221)
chr4 (37-103)||(22867086-22867152)
chr4 (37-103)||(29669714-29669780)
chr4 (37-103)||(45426972-45427038)
chr4 (37-101)||(990551-990615)
chr4 (37-101)||(29734565-29734629)
chr4 (37-101)||(43972359-43972423)
chr4 (39-103)||(50858330-50858394)
chr4 (37-120)||(5427113-5427196)
chr4 (37-103)||(991206-991272)
chr4 (37-103)||(51470485-51470551)
chr4 (38-103)||(56509611-56509676)
chr4 (37-117)||(43798163-43798242)
chr4 (54-117)||(47845775-47845839)
chr4 (37-88)||(991054-991105)
chr4 (36-103)||(49544334-49544401)
chr4 (37-103)||(13254385-13254451)
chr4 (37-103)||(27048444-27048510)
chr4 (37-103)||(43972041-43972107)
chr4 (37-103)||(48843053-48843119)
chr4 (37-103)||(50858014-50858080)
chr4 (69-117)||(21644483-21644531)
chr4 (45-97)||(43943681-43943733)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-120)||(165769-165868)
[»] chr3 (45 HSPs)
chr3 (21-117)||(10450444-10450541)
chr3 (21-117)||(10450668-10450765)
chr3 (48-119)||(9178893-9178964)
chr3 (21-120)||(9180353-9180452)
chr3 (21-115)||(11244561-11244656)
chr3 (21-120)||(24453763-24453862)
chr3 (38-120)||(53966217-53966300)
chr3 (21-107)||(48511659-48511745)
chr3 (21-117)||(15820625-15820722)
chr3 (21-120)||(48511430-48511530)
chr3 (37-120)||(9179118-9179201)
chr3 (21-120)||(16060905-16061004)
chr3 (22-103)||(54369041-54369122)
chr3 (37-117)||(10453739-10453818)
chr3 (44-120)||(10856669-10856745)
chr3 (37-117)||(48837044-48837124)
chr3 (21-120)||(40769932-40770031)
chr3 (21-103)||(13769311-13769393)
chr3 (37-103)||(27219331-27219397)
chr3 (37-103)||(44573328-44573394)
chr3 (21-120)||(16045390-16045489)
chr3 (28-103)||(47833689-47833764)
chr3 (37-103)||(34715491-34715557)
chr3 (19-120)||(42190495-42190596)
chr3 (37-103)||(43101407-43101473)
chr3 (55-117)||(51734611-51734672)
chr3 (46-103)||(41380726-41380783)
chr3 (30-102)||(22666347-22666419)
chr3 (44-103)||(45443282-45443341)
chr3 (37-103)||(44573641-44573707)
chr3 (37-103)||(48685353-48685419)
chr3 (52-120)||(16051586-16051654)
chr3 (28-103)||(24860088-24860162)
chr3 (51-118)||(42576278-42576345)
chr3 (37-100)||(50203893-50203956)
chr3 (37-103)||(3985775-3985841)
chr3 (37-117)||(10453924-10454000)
chr3 (37-103)||(14170035-14170101)
chr3 (37-103)||(21750477-21750543)
chr3 (53-114)||(2800013-2800073)
chr3 (38-103)||(4256236-4256301)
chr3 (49-102)||(5321584-5321637)
chr3 (45-97)||(39078815-39078867)
chr3 (45-97)||(42258918-42258970)
chr3 (45-97)||(49477542-49477594)
[»] scaffold0785 (2 HSPs)
scaffold0785 (19-118)||(3138-3237)
scaffold0785 (91-120)||(2986-3015)
[»] scaffold0166 (1 HSPs)
scaffold0166 (21-107)||(34670-34755)
[»] scaffold0003 (1 HSPs)
scaffold0003 (30-116)||(43710-43795)
[»] scaffold0989 (1 HSPs)
scaffold0989 (21-97)||(2967-3043)
[»] scaffold0029 (1 HSPs)
scaffold0029 (45-97)||(76860-76912)


Alignment Details
Target: chr2 (Bit Score: 465; Significance: 0; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 465; E-Value: 0
Query Start/End: Original strand, 19 - 597
Target Start/End: Original strand, 4342276 - 4342864
Alignment:
Q  19 ataaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  4342276 ataaaaccggtttgtatggtgaggtctgcctcctctttattaactctcctcaagaattctatctatccgatgtgggactaaatcccactgagtgttggcc 4342375  T
Q  119 gccgctaacactgacaactgaactatgctcacagaca--caaagagaaatatatttgacctatgaaaaagttcttgtcttttgtttcttgtcttacaaac 216  Q
    ||   ||||||||||||||||||||||||||||||||  || ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4342376 gc---taacactgacaactgaactatgctcacagacagacacagagaaagatatttgacctttgaaaaagttcttatcttttgtttcttgtcttacaaac 4342472  T
Q  217 ttgatatatccatttcggttgctccaatacaaaagcctgtctaattgggacggcaaactaggtattcaattgtccaattcttcatttttattttgtctgt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4342473 ttgatatatccatttcggttgctccaatacaaaagcctgtctaattgggacggcaaactaggtattcaattgtccaattcttcatttttattttgtctgt 4342572  T
Q  317 gtgtttggtacaaagagtacaagaaaattttataatc-----------ctatgctttctctatgattatttgatcatcctccttcgtatacacatcttta 405  Q
    |||||||||||||||||||||||||| ||||||||||           ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4342573 gtgtttggtacaaagagtacaagaaacttttataatcagtgcatgacactatgctttctctttgattatttgatcatcctccttcgtatacacatcttta 4342672  T
Q  406 aatagttttaatttttgattcaattcaatatcagaaaaagtgttttgagtaatggaacaacaacataaagtgtttcctcttctgctgctacttgttttcc 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4342673 aatagttttaatttttgattcaattcaatatcagaaaaagtgttttgagtaatggaacaacaacataaagtgtttcctcttctgctgctacttgttttcc 4342772  T
Q  506 aagttctgtttgtttcatcacagacagacagcggagattgtaagttactacgtttgagtaactaatctctaacaaacttgttataatctata 597  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  4342773 aagttctgtttgttgcatcacagacagacagcggagattgtaagttactatgtttgagtaactaatctctaacaaacttgtgctaatctata 4342864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 420 - 551
Target Start/End: Original strand, 4360211 - 4360342
Alignment:
Q  420 ttgattcaattcaatatcagaaaaagtgttttgagtaatggaacaacaacataaagtgtttcctcttctgctgctacttgttttccaagttctgtttgtt 519  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||| ||  ||||    
T  4360211 ttgattcaattcaatatcagaacaagtgttttgtgtaatggaagaacaacataaagtgtttcctcttcttctgctgcttcttttccaagttttgcatgtt 4360310  T
Q  520 tcatcacagacagacagcggagattgtaagtt 551  Q
     |||||||||||||| | ||||||||||||||    
T  4360311 gcatcacagacagaccgtggagattgtaagtt 4360342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 33532756 - 33532853
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||  ||||||||||||    
T  33532756 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccctcgagtgttggcc 33532853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 10862078 - 10862177
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||| | ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||    
T  10862078 aaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccctcgagtgttggccgc 10862177  T

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Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 10861863 - 10861953
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||||| |||| ||||| |||||||||||||||||  ||||||||||||||    
T  10861863 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccaatatgggactaaatcccctcgagtgttggccgc 10861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 4506087 - 4506156
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    ||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  4506087 ctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggc 4506156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 11350223 - 11350304
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  11350223 gtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatatgggactaaatcccacccgagtgttggc 11350304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 39420781 - 39420681
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | ||||||||||||| ||||||||||||||| |||||| ||||| | | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  39420781 aaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatctatccgatgtgggactaaatcccacccgagagttggccg 39420682  T
Q  120 c 120  Q
    |    
T  39420681 c 39420681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 28193604 - 28193694
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||||| || ||| ||||||||| ||||||||| ||| ||||||||||||||  ||||||||||||||    
T  28193604 ttgtacggtgaggagtgcctcctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatcccctcgagtgttggccgc 28193694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 11349829 - 11349910
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  11349829 gtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggc 11349910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 28193364 - 28193453
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccg 119  Q
    |||||| |||||| ||||||||| ||||| |||||| ||||||||| ||||||||||||| || |||||||||||  |||||||||||||    
T  28193364 ttgtacggtgaggagtgcctcctatttataaactcttctcaagaatcctatctatccgatgtgagactaaatcccctcgagtgttggccg 28193453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 15962177 - 15962277
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||| | ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  15962177 aaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 15962276  T
Q  120 c 120  Q
    |    
T  15962277 c 15962277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 936887 - 936796
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||| |||||| ||| ||||||||||| |||||| ||||||| | ||||||||||||| || |||||||||||| ||||| |||||||||    
T  936887 ttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatctatccgatgtgagactaaatcccacccgagagttggccgc 936796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 3976507 - 3976573
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| |||||||||  |||||||||||| |||||||||||||    
T  3976507 gtgaggagtgcctcctctttataaactcttctcaagaatattatctatccgatgtgggactaaatcc 3976573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 3977023 - 3977105
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| | ||||| | ||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  3977023 aaaaccggcttgtaatttgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 3977105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 14280341 - 14280267
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc-gagtgttggc 117  Q
    ||||||||||||||| |||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||||||    
T  14280341 gtgcctcctctttataaactcttctcatgaatcctatctatccaatgtgggactaaatcccacctgagtgttggc 14280267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 14288996 - 14288906
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||| ||||||||||| |||||| |||||||||  ||| ||||||| |||||||||||||||| ||| ||||| ||||    
T  14288996 ttgtacggtgaggagtgtctcctctttataaactcttctcaagaatcatatttatccgacatgggactaaatcccatcgaatgttgaccgc 14288906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 43169310 - 43169244
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  43169310 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 43169244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 15961820 - 15961920
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| ||   | ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  15961820 aaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 15961919  T
Q  120 c 120  Q
    |    
T  15961920 c 15961920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 10862381 - 10862291
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||| | ||| ||||||||||| |||||| || || |||  |||||||||||| ||||||||||||||  ||||||||||||||    
T  10862381 ttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatctatccgatgtgggactaaatcccctcgagtgttggccgc 10862291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 11969120 - 11969054
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||  |||||||||||||    
T  11969120 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgacgtgggactaaatcc 11969054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 21213921 - 21213987
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | |||||||||| || |||||||||||||    
T  21213921 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccaatgtgggactaaatcc 21213987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 23054394 - 23054328
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| || |||||||| ||| |||||||||||||    
T  23054394 gtgaggagtgcctcctctttataaactcttctcaagagttatatctatctgatgtgggactaaatcc 23054328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 30166115 - 30166181
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||| ||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  30166115 gtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 30166181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 32810923 - 32810993
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    ||||||||||| ||||||  |||||||| |||||||||||||  |||||||||||||| ||||||||||||    
T  32810923 ctcctctttataaactcttatcaagaatcctatctatccgatgcgggactaaatcccacccgagtgttggc 32810993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 36161367 - 36161468
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatc-tatccgatatgggactaaatccca-ccgagtgttggcc 118  Q
    |||||| | |||||| |||||| ||||||||||||| | |||||| ||||||||| ||||| |||||||| ||||||||||||||| | ||| |||||||    
T  36161367 aaaaccggcttgtacggtgaggagtgcctcctcttt-taaactcttctcaagaatcctatcttatccgatgtgggactaaatcccagctgagagttggcc 36161465  T
Q  119 gcc 121  Q
    |||    
T  36161466 gcc 36161468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 43195852 - 43195787
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatc 102  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| ||||||||||||    
T  43195852 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatc 43195787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 17509193 - 17509111
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||||||||||||||| |||||| ||||||  | ||||||||| ||| |||| ||||||||    
T  17509193 aaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagggtgctatctatctgatgtggggctaaatcc 17509111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 21214237 - 21214303
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | |||||||||  || |||||||||||||    
T  21214237 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctaatgtgggactaaatcc 21214303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 25441764 - 25441698
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||| ||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  25441764 gtgaggagtgccccctctttataaactcttctcaagagtactatctatctgatgtgggactaaatcc 25441698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 17325254 - 17325173
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatc 102  Q
    |||||| | |||||| |||| | ||||||||||||||| || ||| || |||||| ||||||||| ||| ||||||||||||    
T  17325254 aaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatctatcagatgtgggactaaatc 17325173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 32196948 - 32196895
Alignment:
Q  67 ctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||| ||||||||||||| || |||||||| ||||||||||||| ||||    
T  32196948 ctcaagaatactatctatccgatgtgagactaaattccaccgagtgttgaccgc 32196895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 42768370 - 42768432
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaat 101  Q
    |||||| ||||||||||||||| |||||| ||||||| |  |||||||||||| |||||||||||    
T  42768370 gtgaggagtgcctcctctttataaactcttctcaagagt--tatctatccgatgtgggactaaat 42768432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 3976193 - 3976257
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| ||| |||||| |||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  3976193 gaggagtgtctcctccttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 3976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 12432189 - 12432113
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    ||||||| ||||||  ||||||  |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  12432189 aaaaccaatttgtaaggtgaggattgcctcctctttataaactcttctcaagattcttatctatccgatgtgggact 12432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 6183413 - 6183468
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||| |||||| ||||||| | ||||||||||||| ||||| |||||||    
T  6183413 ctcctctttataaactcttctcaagagtactatctatccgatgtgggattaaatcc 6183468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 18901907 - 18901966
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||| ||||||  |||||| |  |||||||||||| |||||||||||||    
T  18901907 gtgcctcctctttataaactcttttcaagagtcttatctatccgatgtgggactaaatcc 18901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 27545136 - 27545211
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggac 96  Q
    |||||| |||||||  ||||||  |||||||||||||| |||||| ||||||| |  |||||||||||| ||||||    
T  27545136 aaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggac 27545211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 7877912 - 7877846
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||| ||||||||||| |||||| ||| ||| | ||||||||||||| | |||||||||||    
T  7877912 gtgaggagtgtctcctctttataaactcttctcgagagtgctatctatccgatgtaggactaaatcc 7877846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 15061285 - 15061367
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||||||||||||||| |||| |  |||||  | ||||||| ||||| |||||||||||||    
T  15061285 aaaaccagcttgtaaggtgaggagtgcctcctctttataaactttgatcaagcttcctatctaaccgatgtgggactaaatcc 15061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 44266355 - 44266425
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    ||||||||||| |||||| ||||| |||  |||||||| ||| ||||||||||||||  ||| ||||||||    
T  44266355 ctcctctttataaactcttctcaaaaatcttatctatctgatgtgggactaaatcccctcgaatgttggcc 44266425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 17326097 - 17326150
Alignment:
Q  67 ctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||| ||||||||| ||| |||||||||||| |||  ||||||||||||    
T  17326097 ctcaagaatcctatctatcagatgtgggactaaatctcactaagtgttggccgc 17326150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 39596744 - 39596805
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaa 100  Q
    |||| ||||||||||||||| ||||||  |||||| |||||| || ||||| ||||||||||    
T  39596744 gaggagtgcctcctctttataaactcttatcaagagttctatatagccgatgtgggactaaa 39596805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 883645 - 883697
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  883645 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 883697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 3435506 - 3435582
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||| |||||||  ||||||  |||||||||| ||| |||||| ||||||| |  |||||||||||| |||||||    
T  3435506 aaaaccggtttgtaaggtgaggattgcctcctctgtataaactcttctcaagagtcttatctatccgatgtgggact 3435582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 6986460 - 6986512
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  6986460 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 6986512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 15711571 - 15711484
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  15711571 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggc 15711484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 9596022 - 9596112
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||||||| ||||||||||||||| || | | ||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||    
T  9596022 ttgtactgtgaggagtgcctcctctttataaaatattctcaagaatcctatctatccgatgtggaactaaatcccaccgagtgttggccgc 9596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 35908762 - 35908663
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| |||||| |||||||| |||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||||||    
T  35908762 aaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatcccaccgagtgttggccgc 35908663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 9596248 - 9596336
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||| |||||| |||| | |||||||| |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  9596248 ttgtacagtgaggagtgcattctctttataaactcttctcaagaatcttatctatccgatatgagactaaatcccaccgagtgttggcc 9596336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 18464145 - 18464054
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||| |||||| |||||| |||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||||| |||||||||||||||    
T  18464145 ttgtacggtgaggagtgccttctctttataaactcttctcaagaatcctatctatctgatgtgggactaaatcccacccgagtgttggccgc 18464054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 38287784 - 38287854
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  38287784 ctcctctttataaactcttatcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggcc 38287854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 14019876 - 14019795
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  14019876 gtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggc 14019795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 21085168 - 21085250
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  21085168 aaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 21085250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 8605574 - 8605475
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| ||||||||||| ||| |||||| ||||||||| |||| |||||||  || ||||||||  |||||||||||||||||    
T  8605574 aaaaccggcttgtacagtgaggagtgcctcctctatataaactcttctcaagaatcctatttatccgacgtgagactaaatgtcaccgagtgttggccgc 8605475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 17607243 - 17607333
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||  ||||||||||||||| |||||| | ||||||| ||||||||||||| || ||||||||||   ||||||||||||||    
T  17607243 ttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatctatccgatgtgagactaaatccactcgagtgttggccgc 17607333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 18905924 - 18905858
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  18905924 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 18905858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 32931469 - 32931403
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| |||||||||  |||||||||||| |||||||||||||    
T  32931469 gtgaggagtgcctcctctttataaactcttctcaagaatgatatctatccgatgtgggactaaatcc 32931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 23027548 - 23027607
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||| |||||| ||||||| ||||||||||| ||| |||||||||||||    
T  23027548 gtgcctcctctttataaactcttctcaagagttctatctatctgatgtgggactaaatcc 23027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 8276633 - 8276551
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| | |||||| |||||  ||| ||||||||||| |||||| ||||||||| |||||||||| || |||||||||||||    
T  8276633 aaaaccggcttgtacagtgagaagtgtctcctctttataaactcttctcaagaatcctatctatccaatgtgggactaaatcc 8276551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 20232447 - 20232517
Alignment:
Q  51 ctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||||| |||||| |||||||||   ||||||||||| ||||||||||||||| |||||||||||||||    
T  20232447 ctctttataaactcttctcaagaatctcatctatccgatgtgggactaaatcccacccgagtgttggccgc 20232517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 20298536 - 20298618
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||||||||||||||| |||||| |||||||||  ||||||||  || |||||||||||||    
T  20298536 aaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagaataatatctatcaaatgtgggactaaatcc 20298618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 23027864 - 23027930
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| | |||| ||||||| |||||||||||| || |||||||||||||    
T  23027864 gtgaggagtgcctcctctttataagctcttctcaagagttctatctatcctatgtgggactaaatcc 23027930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 34248145 - 34248079
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||| | ||||||| ||||| |||||||||||||    
T  34248145 gtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatcc 34248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 35561726 - 35561674
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| |||||||||  |||||||||||| |||||||    
T  35561726 tgcctcctctttataaactcttctcaagaatcttatctatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 38287984 - 38288080
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||||| |||||| |||||  ||| ||||||||||| |||||| ||||| ||| ||||||||   |  || ||||||||| ||||||||||||||    
T  38287984 aaaaccagcttgtacggtgagtagtgtctcctctttataaactcttctcaaaaatcctatctatttaacgtgtgactaaatctcaccgagtgttggc 38288080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 39587894 - 39587973
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| |||| |||||||||| |||||| ||| ||||| ||||| ||| ||| ||||||||||| |||| ||||||||||    
T  39587894 gtgaggagtgcttcctctttataaactcttctctagaatcctatccatctgatgtgggactaaat-ccactgagtgttggc 39587973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 21653388 - 21653329
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||| ||| |||||| |||||||   ||||||||||||| |||||||||||||    
T  21653388 gtgcctcctctatataaactcttctcaagagcactatctatccgatgtgggactaaatcc 21653329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 21653872 - 21653806
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||| ||| |||| | |||||||   ||||||||||||| |||||||||||||    
T  21653872 gtgaggagtgcctcctctgtataaacttttctcaagagcactatctatccgatgtgggactaaatcc 21653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 34248427 - 34248361
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||| | ||||||| || || |||||||||||||    
T  34248427 gtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccaatgtgggactaaatcc 34248361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 3183955 - 3183999
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgat 89  Q
    |||||||||||||| |||||| ||||||| | |||||||||||||    
T  3183955 tgcctcctctttataaactcttctcaagagtcctatctatccgat 3183999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 5720911 - 5720963
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  5720911 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 5720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 43599371 - 43599319
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  43599371 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 5e-27; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 39550007 - 39550097
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||| | ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  39550007 ttgtacagtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggccgc 39550097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 34748862 - 34748762
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| ||||||  |||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  34748862 aaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagtgttggccg 34748763  T
Q  120 c 120  Q
    |    
T  34748762 c 34748762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 36270499 - 36270589
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||| ||||||||||| |||||  ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  36270499 ttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttgaccgc 36270589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 27585340 - 27585243
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc-gagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||| ||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||    
T  27585340 aaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacctgagtgttggc 27585243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 36495973 - 36495873
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  36495973 aaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatgtgggactaaatcccacccgagagttggccg 36495874  T
Q  120 c 120  Q
    |    
T  36495873 c 36495873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 22206305 - 22206389
Alignment:
Q  28 gtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtg 112  Q
    |||||||  |||||| ||||||||||||||| |||| | ||||||||| |||||||| |||| ||||||||||||||||||||||    
T  22206305 gtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatcccaccgagtg 22206389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 22228434 - 22228350
Alignment:
Q  28 gtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtg 112  Q
    |||||||  |||||| ||||||||||||||| |||| | ||||||||| |||||||| |||| ||||||||||||||||||||||    
T  22228434 gtttgtatggtgaggagtgcctcctctttataaacttttctcaagaatcctatctattcgatgtgggactaaatcccaccgagtg 22228350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 36092619 - 36092714
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||||| |||||  |||||| ||||||||||| ||| |||||| ||||||||| ||||||||||||| |||||||||||  ||||||||||||||    
T  36092619 aaaaccagcttgtaaggtgaggagtgcctcctctctataaactcttctcaagaatcctatctatccgatgtgggactaaat-acaccgagtgttggc 36092714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 37755958 - 37756058
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||| | ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  37755958 aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 37756057  T
Q  120 c 120  Q
    |    
T  37756058 c 37756058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 37756184 - 37756284
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||| | ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  37756184 aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 37756283  T
Q  120 c 120  Q
    |    
T  37756284 c 37756284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 37761932 - 37762032
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||| | ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  37761932 aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 37762031  T
Q  120 c 120  Q
    |    
T  37762032 c 37762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 47346114 - 47346214
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  47346114 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctgatgtgggactaaatcccacccgagagttggccg 47346213  T
Q  120 c 120  Q
    |    
T  47346214 c 47346214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 47346343 - 47346443
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||| | |||||| |||||| ||||||||||||||| ||||| ||||||||    
T  47346343 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctttccgatgtgggactaaatcccacccgagagttggccg 47346442  T
Q  120 c 120  Q
    |    
T  47346443 c 47346443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 33909221 - 33909122
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| |||  |||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  33909221 aaaaccggcttgtacagtgaggagtgtatcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagagttggccg 33909122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 19843782 - 19843692
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| |||| | |||||||| |||||| ||||||||| ||||||||| ||| ||||||||||||||  ||||||||||||||    
T  19843782 ttgtacggtgaggagtgctttctctttataaactcttctcaagaatcctatctatctgatttgggactaaatcccttcgagtgttggccgc 19843692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 41670667 - 41670585
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||  |||||| ||||||||||||||| |||||| ||||||| | |||||||| |||| |||||||||||||    
T  41670667 aaaaccagtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtactatctattcgatgtgggactaaatcc 41670585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 43384316 - 43384382
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||    
T  43384316 gtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 43384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 36270717 - 36270817
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||   |||||||| |||||||||| || |||||| |||||||| ||||||||||||||    
T  36270717 aaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatctatccaatgtgggacaaaatcccacccgagtgttggccg 36270816  T
Q  120 c 120  Q
    |    
T  36270817 c 36270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 36495734 - 36495650
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||| ||||||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  36495734 gtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatgtgggactaaatgccacccgagagttggccgc 36495650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 257303 - 257369
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| |||||||||  |||||||||||| |||||||||||||    
T  257303 gtgaggagtgcctcctctttataaactcttctcaagaataatatctatccgatgtgggactaaatcc 257369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 1661227 - 1661293
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| || |||||||||||| |||||||||||||    
T  1661227 gtgaggagtgcctcctctttataaactcttctcaagagttttatctatccgatgtgggactaaatcc 1661293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 19843558 - 19843469
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||||  |||||| ||||| ||| ||||||||||||| ||||||| ||||||  ||||||||||||||    
T  19843558 ttgtacggtgaggagtgcctcctctttaa-aactcttctcaataatcctatctatccgatttgggacttaatcccctcgagtgttggccgc 19843469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 34914940 - 34915026
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| | |||||| |||||| ||||||| ||||| | |||||| ||||||||| || |||||||||| |||||||||||||||||    
T  34914940 aaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtctatccgatgtgggactaaatcccacc 34915026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 20296329 - 20296248
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||| ||| ||||||||||| |||||| ||||||||| || ||||||| || ||||||||||||||  ||||||||||||||    
T  20296329 gaggagtgtctcctctttataaactcttctcaagaatcctctctatccaatgtgggactaaatcccctcgagtgttggccgc 20296248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 37530960 - 37531025
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| ||||||||||||||| |||||| ||||||||| ||||||||||||  |||||||||||||    
T  37530960 tgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatcc 37531025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 27729553 - 27729597
Alignment:
Q  76 tctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  27729553 tctatctatccgatgtgggactaaatcccaccgagtgttggccgc 27729597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 7135279 - 7135345
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| || ||||||||||    
T  7135279 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgtgactaaatcc 7135345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 43167937 - 43167995
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  43167937 tgcctcctctttataaactcttctcaagagtgctatctatccgatttgggactaaatcc 43167995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 44314354 - 44314424
Alignment:
Q  51 ctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||||| |||||| |||||||||   ||||||||||| ||||||||||||||| |||||||||||||||    
T  44314354 ctctttataaactcttctcaagaatctcatctatccgatgtgggactaaatcccacccgagtgttggccgc 44314424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 1663640 - 1663707
Alignment:
Q  37 gtgaggtgtgcctcctcttt-attaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||| || |||||| ||||||| | ||||||||||||| |||||||||||||    
T  1663640 gtgaggagtgcctcctcttttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 1663707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 14991538 - 14991593
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatc 85  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||||| |||||||||    
T  14991538 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatc 14991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 15421149 - 15421204
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatc 85  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||||| |||||||||    
T  15421149 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatc 15421204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 40121975 - 40122038
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaa 100  Q
    |||||| ||| ||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||    
T  40121975 gtgaggagtgtctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaa 40122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 22686751 - 22686852
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctc--ctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||||| |||||| |||||| ||| |||  |||||||| ||||||  |||||||| |||| |||||||| ||||| ||||||||  ||||||||| ||    
T  22686751 aaaaccagcttgtacggtgaggagtgtctctcctctttataaactcttttcaagaatcctatttatccgatgtgggattaaatcccctcgagtgttgacc 22686850  T
Q  119 gc 120  Q
    ||    
T  22686851 gc 22686852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 37272081 - 37272147
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||| | ||||||| ||||| |||||||||||||    
T  37272081 gtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggactaaatcc 37272147  T

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Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 40121654 - 40121720
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||| ||| |||||| ||||||| | ||||||||||||| ||| |||||||||    
T  40121654 gtgaggagtgcctcctctctataaactcttctcaagagtactatctatccgatgtggaactaaatcc 40121720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 6813115 - 6813174
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    ||||| ||||||||||||||| ||||||| |||||| | | ||||||||||| |||||||    
T  6813115 tgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgatgtgggact 6813174  T

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Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 24240237 - 24240284
Alignment:
Q  60 aactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| ||||||| | ||||||||||||| |||||||||||||||||    
T  24240237 aactcttctcaagattcctatctatccgatgtgggactaaatcccacc 24240284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 36092428 - 36092506
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    |||||| || |||||||| ||| |||||| |||||||||  ||||||||| || ||||||||||| |||| |||||||||    
T  36092428 gtgaggagtacctcctctctataaactcttctcaagaatcatatctatccaatgtgggactaaat-ccactgagtgttgg 36092506  T

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Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 28910100 - 28910034
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| | ||||| | |||||||||  || |||||||||||||    
T  28910100 gtgaggagtgcctcctctttataaactcttcccaagagtcctatctatcttatgtgggactaaatcc 28910034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 24240449 - 24240510
Alignment:
Q  60 aactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||| || |||| | ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  24240449 aactcttcttaagattcctatctatccgatgtgggactaaatcccacccgagagttggccgc 24240510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 43288331 - 43288266
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| ||||||||||||||| ||||||  |||||| | ||||||| ||||| ||||| |||||||    
T  43288331 tgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgggagtaaatcc 43288266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 6751745 - 6751805
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||| ||||||||||||| | ||||||| ||||||||   ||||||||||| |||||||    
T  6751745 gtgaggagtgcctcctctttgtaaactctcatcaagaatctcatctatccgatgtgggact 6751805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 9379084 - 9379016
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgat 89  Q
    |||||| |||||||  ||||||  |||||||||||||| |||||| ||||||| |  ||||||||||||    
T  9379084 aaaaccggtttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgat 9379016  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 43383989 - 43384045
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaa 100  Q
    ||||||||||||||| ||||||   ||||| | ||||||||||||| ||||||||||    
T  43383989 gtgcctcctctttataaactctttgcaagactcctatctatccgatgtgggactaaa 43384045  T

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Target: chr1 (Bit Score: 62; Significance: 2e-26; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 12287932 - 12287835
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||||| |||||| |||||| ||||||||||||||| | ||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12287932 aaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggcc 12287835  T

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Target: chr1; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 17295062 - 17294962
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  17295062 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagtgttggccg 17294963  T
Q  120 c 120  Q
    |    
T  17294962 c 17294962  T

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Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 45443304 - 45443205
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| || ||| ||||||| ||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  45443304 aaaaccggcttgtacggttaggagtgcctcatctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggccgc 45443205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 18585113 - 18585026
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| |||||| || |||||||||||| || ||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  18585113 ttgtacggtgaggagtccctcctctttataaaatcttctcaagaatcctatctatccgatgtgggactaaatcccaccgagtgttggc 18585026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 45858730 - 45858640
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||   |||||||||||||    
T  45858730 ttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccccatgagtgttggccgc 45858640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 29228750 - 29228659
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  29228750 ttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccgc 29228659  T

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Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 19937079 - 19937145
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||    
T  19937079 gtgaggagtgcctcctctttataaactcttctcaagaattctatctatccgatgtgggactaaatcc 19937145  T

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Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 51722338 - 51722240
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctct-ttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||||| |||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  51722338 aaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagtgttggc 51722240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 27958067 - 27958163
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||| |||||||||  ||  ||||||||||||| ||||||||||||    
T  27958067 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatctaatgcgggactaaatccctccgagtgttggc 27958163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 29228532 - 29228432
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||| |||||||||| ||||| ||||||||    
T  29228532 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggtctaaatcccacccgagagttggccg 29228433  T
Q  120 c 120  Q
    |    
T  29228432 c 29228432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 33562147 - 33562247
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| | ||||  |||||||| ||||||||||||| |||||||||| |||| ||||||||||||||    
T  33562147 aaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccgatgtgggactaaaacccacccgagtgttggccg 33562246  T
Q  120 c 120  Q
    |    
T  33562247 c 33562247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 28509430 - 28509506
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaat---cccaccgagtgttggc 117  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||   ||||||||||||||||    
T  28509430 gtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccacccaccgagtgttggc 28509506  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 31411580 - 31411678
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggcc 118  Q
    |||||| | |||||| ||||| |||||||||| ||||| ||||||  |||||||| ||||||||| ||| ||||||||||||||| |||||||||||||    
T  31411580 aaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatcctatctatctgatgtgggactaaatcccacccgagtgttggcc 31411678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 4187534 - 4187633
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| |||||||||||| || |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  4187534 aaaaccggcttgtacggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 4187632  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 40642810 - 40642878
Alignment:
Q  35 ctgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| ||| ||||||||||| |||||| ||||||||| ||||||||||||| |||||||||||||    
T  40642810 ctgtgaggagtgtctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcc 40642878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 2697367 - 2697433
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  2697367 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 2697433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 4022161 - 4022227
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  4022161 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 4022227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 17419855 - 17419789
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  17419855 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 17419789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 29383652 - 29383742
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| || ||| |||||||| |||||| |||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||||||    
T  29383652 ttgtacggtaaggagtgcctccgctttataaactcttctcaagtatcttatctatccgatgtgggactaaatccacccgagtgttggccgc 29383742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 38474351 - 38474284
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccc 104  Q
    |||||| ||||||||||||||| ||||||  |||||||| ||||||||||||| | ||||||||||||    
T  38474351 gtgaggagtgcctcctctttataaactcttgtcaagaatcctatctatccgatgtaggactaaatccc 38474284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 120
Target Start/End: Original strand, 40521513 - 40521612
Alignment:
Q  22 aaaccagtttgtactgtgaggtgtgcctcc-tctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||| |||||||| |||| | ||| |||| ||||||| |||||| |||||||||  |||||||||||| |||||||||||| |  ||||||||||||||    
T  40521513 aaaccggtttgtacggtgaagagtgtctccctctttataaactcttctcaagaatcttatctatccgatgtgggactaaatcacctcgagtgttggccgc 40521612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 8520129 - 8520195
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||| ||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  8520129 gtgaggagtgcctcttctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 8520195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 31305779 - 31305713
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  31305779 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatcggatgtgggactaaatcc 31305713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 17294903 - 17294851
Alignment:
Q  69 caagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  17294903 caagaatcctatctatccgatgtgggactaaatcccacccgagtgttggccgc 17294851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 30604507 - 30604566
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    ||||||||||| |||| | ||||||| | ||||||||||||| |||||||||||||||||    
T  30604507 ctcctctttataaactattctcaagattcctatctatccgatgtgggactaaatcccacc 30604566  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 4187336 - 4187402
Alignment:
Q  55 ttattaactctcctcaagaattctatctatccgatatgggactaaatcccac-cgagtgttggccgc 120  Q
    |||| |||||| ||||||| | ||||||||||||| |||||||||||||||| |||| |||||||||    
T  4187336 ttataaactcttctcaagattcctatctatccgatgtgggactaaatcccactcgagagttggccgc 4187402  T

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Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 33879798 - 33879880
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||| ||||||||||| |||||| ||||||| | |||| |||| ||| |||||||||||||    
T  33879798 aaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctatatatctgatgtgggactaaatcc 33879880  T

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Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 33964457 - 33964375
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||| ||||||||||| |||||| ||||||| | |||| |||| ||| |||||||||||||    
T  33964457 aaaaccagcttgtaaggtgaggagtggctcctctttataaactcttctcaagagtgctatatatctgatgtgggactaaatcc 33964375  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 43423347 - 43423281
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| |  |||||||||||| ||||| |||||||    
T  43423347 gtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggaataaatcc 43423281  T

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Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 27957829 - 27957926
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||| | |||||| |||||| | | ||||||||||| |||| | ||||||||| | ||||||| |||  ||||||||||||| || ||||||||||    
T  27957829 aaaaccggcttgtacggtgaggagcgtctcctctttataaacttttctcaagaatcccatctatcagatgcgggactaaatccctccaagtgttggcc 27957926  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 45858916 - 45858864
Alignment:
Q  68 tcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||||| ||||||||||||| || |||||||||||  ||||||||||||||    
T  45858916 tcaagaatcctatctatccgatgtgagactaaatcccctcgagtgttggccgc 45858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 20735590 - 20735524
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| || ||| ||||||| | ||||||||| ||| ||||| |||||||    
T  20735590 gtgaggagtgcctcctctttataaattcttctcaagagtactatctatctgatgtgggattaaatcc 20735524  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 31411425 - 31411474
Alignment:
Q  68 tcaagaattctatctatccgatatgggactaaatccca-ccgagtgttgg 116  Q
    |||||||| ||||||||||||| || |||||||||||| |||||||||||    
T  31411425 tcaagaatcctatctatccgatgtgagactaaatcccacccgagtgttgg 31411474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 20208149 - 20208196
Alignment:
Q  68 tcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    ||||||||  |||||||||||| ||||||||||| ||||||||||||||    
T  20208149 tcaagaatcatatctatccgatgtgggactaaat-ccaccgagtgttgg 20208196  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 20208448 - 20208495
Alignment:
Q  68 tcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    ||||||||  |||||||||||| ||||||||||| ||||||||||||||    
T  20208448 tcaagaatcatatctatccgatgtgggactaaat-ccaccgagtgttgg 20208495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 608
Target Start/End: Complemental strand, 30745566 - 30745523
Alignment:
Q  564 taactaatctctaacaaacttgttataatctatactatatacatc 608  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  30745566 taactaatctctatcaa-cttgttataatctatagtatatacatc 30745523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 564 - 608
Target Start/End: Complemental strand, 30767017 - 30766974
Alignment:
Q  564 taactaatctctaacaaacttgttataatctatactatatacatc 608  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  30767017 taactaatctctatcaa-cttgttataatctatagtatatacatc 30766974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 39649128 - 39649180
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  39649128 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 40664276 - 40664212
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| ||||||||||||||| ||||||  |||||| | ||||||| ||||| || ||||||||||    
T  40664276 gaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgagactaaatcc 40664212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 22196362 - 22196445
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  22196362 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcccaccgagtgttggccgc 22196445  T

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Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 84054 - 84152
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggcc 118  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  84054 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccgatgtgggactaaatcccacccgagtgttggcc 84152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 32395334 - 32395434
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  32395334 aaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 32395433  T
Q  120 c 120  Q
    |    
T  32395434 c 32395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 22196573 - 22196672
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||| | ||| ||||||||||| |||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||||||||    
T  22196573 aaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggactaaatcccaccgagtgttggccgc 22196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 2471713 - 2471809
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||| ||  ||||||||||||| ||||||||||||||  |||||||||||    
T  2471713 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatctatccgatgtgggactaaatcccctcgagtgttggc 2471809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 19439944 - 19439845
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| ||| ||||||||||| || ||| ||||||||| ||||||||| ||| ||||||||||||||  ||||||||||||||    
T  19439944 aaaaccggcttgtacggtgaggagtgtctcctctttataaattcttctcaagaatcctatctatctgatgtgggactaaatcccctcgagtgttggccgc 19439845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 30329911 - 30329820
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccc-accgagtgttggccgc 120  Q
    |||||| |||||| || |||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||  ||||| |||||||||    
T  30329911 ttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatccctcccgagagttggccgc 30329820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 1028113 - 1028195
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| |||||||  |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  1028113 aaaaccggtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 1028195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 83853 - 83930
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    ||||||||||||||| |||| | ||||||||| |||| |||||||| ||||||||||||||| |||||||||||||||    
T  83853 gtgcctcctctttataaacttttctcaagaatcctatatatccgatgtgggactaaatcccacccgagtgttggccgc 83930  T

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Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 29396363 - 29396463
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| |||||| ||||||||||||||| |||| | ||||||| | ||||||||| ||| ||||||||||||||| ||||| ||||||||    
T  29396363 aaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatctatctgatgtgggactaaatcccacccgagagttggccg 29396462  T
Q  120 c 120  Q
    |    
T  29396463 c 29396463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 14769852 - 14769951
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| ||| ||| ||||||| |||||| ||||||||| ||||||||||||| || ||||||||||   ||||||||||||||    
T  14769852 aaaaccggcttgtacggtgaggagtgtctcgtctttataaactcttctcaagaatcctatctatccgatgtgagactaaatccactcgagtgttggccgc 14769951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 24792287 - 24792372
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| |||||||  |||||| |||||||||||| || |||||| ||||||| | |||||||||||||||||||||||||| ||||    
T  24792287 aaaaccggtttgtaaggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatatgggactaaatctcacc 24792372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 28010152 - 28010218
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||||| |||| ||||||| |||||||||||| || |||||||||||||    
T  28010152 gtgaggagtgcctcctctttattagctcttctcaagagttctatctatcctatgtgggactaaatcc 28010218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 33040330 - 33040269
Alignment:
Q  60 aactctcctcaagaattctatctatccgatatgggactaaatcccac-cgagtgttggccgc 120  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  33040330 aactcttctcaagaatcctatctatccgatgtgggactaaatcccacgcgagtgttggccgc 33040269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 37995678 - 37995736
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  37995678 tgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 37995736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 18541988 - 18541935
Alignment:
Q  67 ctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||| ||||||||||||| || |||||||||||||| ||||||||||||    
T  18541988 ctcaagaatcctatctatccgatgtgagactaaatcccaccaagtgttggccgc 18541935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 33040515 - 33040454
Alignment:
Q  60 aactctcctcaagaattctatctatccgatatgggactaaatcccac-cgagtgttggccgc 120  Q
    |||||| ||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||    
T  33040515 aactcttctcaagaatcctatctatctgatgtgggactaaatcccacgcgagtgttggccgc 33040454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 13844074 - 13844015
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  13844074 gtgcctcctctttataaactcttctcaagagtactatctatcagatgtgggactaaatcc 13844015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 28009840 - 28009899
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||| ||||||| |||||| ||||||| ||||||||||| ||| |||||||||||||    
T  28009840 gtgcctcttctttataaactcttctcaagagttctatctatctgatgtgggactaaatcc 28009899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 30588118 - 30588059
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||| ||||||  |||||| ||||||||| ||||| |||||||||||||    
T  30588118 gtgcctcctctttataaactcttatcaagagttctatctaaccgatgtgggactaaatcc 30588059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 38131821 - 38131766
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  38131821 ctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 38131766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 39668462 - 39668532
Alignment:
Q  46 gcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    ||||||||||||| || ||| |||||||||  |||||||||||| ||||||||||| |||| ||||||||||    
T  39668462 gcctcctctttataaattcttctcaagaatcatatctatccgatgtgggactaaat-ccactgagtgttggc 39668532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 873740 - 873798
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||||| ||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  873740 tgcctcctctctataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 873798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 13843765 - 13843699
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| | ||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  13843765 gtgaggagcgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatcc 13843699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 18541789 - 18541708
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||| ||||||||||||||| |||| | |||||||||  |||||||||||| |  |||||||| | ||||||||||||||||    
T  18541789 tgaggagtgcctcctctttataaactattctcaagaatcttatctatccgatcttagactaaat-ctaccgagtgttggccgc 18541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 27760143 - 27760077
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||| ||||||  |||||| ||||||| | ||||||||||||| |||||||||||||    
T  27760143 gtgaggagtgcctcttctttagaaactcttctcaagagtcctatctatccgatgtgggactaaatcc 27760077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 30330145 - 30330064
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatc 102  Q
    |||||| | |||||| |||||| |||||||||||||||  ||||| |||||||||  ||||||| | || ||||||||||||    
T  30330145 aaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatctattcaatgtgggactaaatc 30330064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 5095944 - 5096016
Alignment:
Q  49 tcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    |||||||||| |||||| || || ||| ||||||||||||| ||||| ||||||||| |||||||||| ||||    
T  5095944 tcctctttataaactcttctaaaaaatcctatctatccgatgtgggagtaaatcccacccgagtgttgaccgc 5096016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 33040131 - 33040061
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| ||||||||||| ||| ||||||  |||||||| |||| ||| |||| || ||||||||||||||    
T  33040131 gtgaggagtgcctcctctatataaactcttttcaagaatcctatatattcgatgtgagactaaatcccacc 33040061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 35527032 - 35527084
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  35527032 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 35527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 5e-24; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 26842804 - 26842707
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||||| |||||| |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  26842804 aaaaccagcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggc 26842707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 33396391 - 33396291
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||||| || |||  ||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||| || |||||||||||    
T  33396391 aaaaccagcttttacaatgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccaccctagtgttggccg 33396292  T
Q  120 c 120  Q
    |    
T  33396291 c 33396291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 21067095 - 21067159
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  21067095 gaggagtgcctcctctttataaactcttctcaagaatgctatctatccgatatgggactaaatcc 21067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 21088886 - 21088950
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  21088886 gaggagtgcctcctctttataaactcttctcaagaatgctatctatccgatatgggactaaatcc 21088950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 8144085 - 8144019
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  8144085 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 8144019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 10418374 - 10418440
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||| |||||| | ||||||||||||| |||||||||||||    
T  10418374 gtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgatgtgggactaaatcc 10418440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 33396586 - 33396510
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    ||||||||||||||| |||||| ||||| ||| ||||||||||||| | ||||||||||||| |||||||||||||||    
T  33396586 gtgcctcctctttataaactcttctcaaaaatcctatctatccgatgt-ggactaaatcccacccgagtgttggccgc 33396510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 39 - 103
Target Start/End: Original strand, 21043819 - 21043883
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| |||||| |||||||| |||||| ||||||| | |||||||||||||||||||||||||||    
T  21043819 gaggagtgccttctctttataaactcttctcaagagtgctatctatccgatatgggactaaatcc 21043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 24055145 - 24055211
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||| ||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  24055145 gtgaggagtgcctcgtctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 24055211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 27443566 - 27443651
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    |||||| |||||| |||  |||||||||| |||||| ||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||    
T  27443566 ttgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgatgtggtactaa-tcccaccgagtgttgg 27443651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 26339885 - 26339958
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||| |||||||||| |||||| ||||||| |  |||||||||||| ||||||||||||||  |||||||||||    
T  26339885 gtgcatcctctttataaactcttctcaagattcttatctatccgatgtgggactaaatcccctcgagtgttggc 26339958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 8427625 - 8427535
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||||||||||||| | |||||| |||||||||  ||| |||||||| ||  |||||||| |||||| | ||||||||    
T  8427625 ttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatcttatatatccgatgtgaaactaaatctcaccgaatattggccgc 8427535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 12134503 - 12134581
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaa 99  Q
    |||||| |||||||  || ||| ||| ||||||||||| |||||| ||||||| | ||||||||||||| |||||||||    
T  12134503 aaaaccggtttgtaaggttaggagtgtctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaa 12134581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 25184266 - 25184208
Alignment:
Q  49 tcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||||||| ||||||  |||||||| |||||||||||||  ||||||||||||||||    
T  25184266 tcctctttataaactcttatcaagaatcctatctatccgatgcgggactaaatcccacc 25184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 25184087 - 25183990
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| | |||||| ||||||  || || |||||||| ||||||  ||||||||  ||||||||||||  |||||||||||||| ||||||||||||    
T  25184087 aaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccgatgcgggactaaatcccacccgagtgttggc 25183990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 19712629 - 19712696
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccga 88  Q
    |||||||| |||||  ||||||  |||||||||||||| |||||| ||||||| | ||||||||||||    
T  19712629 aaaaccagcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtgctatctatccga 19712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 1744878 - 1744940
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaa 99  Q
    |||||| ||||||||||||||| ||||||  |||||| | |||||||||| || |||||||||    
T  1744878 gtgaggagtgcctcctctttataaactcttttcaagagtactatctatccaatgtgggactaa 1744940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19054561 - 19054499
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaa 99  Q
    |||||| ||||||| ||||||| |||||| ||||||| |  |||||||||||| |||||||||    
T  19054561 gtgaggagtgcctcatctttataaactcttctcaagagtgttatctatccgatgtgggactaa 19054499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 11317116 - 11317056
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||| ||||| ||||||||| ||||||| |||||| ||  ||||||||||| |||||||    
T  11317116 gtgaggagtgccccctctttataaactctcatcaagagtttcatctatccgatgtgggact 11317056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 13673912 - 13673840
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||| |||||| ||||||||  ||||||||| ||| || || ||||| |||| |||||||||||||    
T  13673912 ctcctcattataaactcttctcaagaaacctatctatctgatgtgagattaaattccactgagtgttggccgc 13673840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 16194077 - 16194005
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||||| |||||| || |||||| |||| |||||||| |||||||| ||| |  | ||||||||||||    
T  16194077 ctcctctttataaactcttctaaagaatcctatatatccgatgtgggactagatctcctctagtgttggccgc 16194005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 46528943 - 46529039
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||| | ||||||||||| || ||||||||||||||||||||||||    
T  46528943 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatctatccgatgtgagactaaatcccaccgagtgttggc 46529039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 33912111 - 33912028
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| ||||||||||||||| |||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||||||    
T  33912111 gtgaggagtgcctcctctttataaactcttctcaagtatcctatctacccgatgtgggactaaatcccaccgagtgttggccgc 33912028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 26941945 - 26941846
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | ||||||  ||||| ||||||||||| ||| |||||| |||||| || |||||||| |||| ||||||||||||||||||||||||||||||    
T  26941945 aaaaccggcttgtacgatgaggagtgcctcctctatataaactcttctcaaggatactatctattcgatgtgggactaaatcccaccgagtgttggccgc 26941846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 37097751 - 37097846
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    |||||| | |||||| |||||| ||| ||||||||||| || ||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  37097751 aaaacccgcttgtacagtgaggagtgtctcctctttataaaatcttctcaagaatcctatctatctgatgtgggactaaatcccaccgagtgttgg 37097846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 4026133 - 4026057
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgcc 121  Q
    |||||| | ||||| |||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  4026133 tgcctcatatttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccactgagtgttggccgcc 4026057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 11290253 - 11290153
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| ||||||  |||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  11290253 aaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 11290154  T
Q  120 c 120  Q
    |    
T  11290153 c 11290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 52810895 - 52810971
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||||||| | |||||| |||||||||  | |||||||||| ||||||||||||||||||||||||||||||    
T  52810895 gtgcctcctctttttgaactcttctcaagaatcttttctatccgatgtgggactaaatcccaccgagtgttggccgc 52810971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 50868033 - 50868119
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| | |||||| ||||||  |||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||||||    
T  50868033 aaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacc 50868119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 2016600 - 2016519
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||| ||||||||||||||| |||||| ||||||||| ||||||||| ||| || |||||||||||  ||||||||||||    
T  2016600 gtgaggagtgcctcctctttataaactcttctcaagaatcctatctatctgatgtgagactaaatcccctcgagtgttggcc 2016519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 29669399 - 29669465
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  29669399 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 29669465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 51469549 - 51469483
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  51469549 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 51469483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 52810654 - 52810744
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||||| ||| ||||||||||| |||||| |||||||||  |||||||||||| | ||||||||| |||  |||||||||||||    
T  52810654 ttgtacggtgaggagtgtctcctctttataaactcttctcaagaatcttatctatccgatgtaggactaaattccattgagtgttggccgc 52810744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 53740250 - 53740184
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  53740250 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 53740184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 37288916 - 37288985
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    ||||| ||||| |||||| |||||||||  |||||||||||| ||||||||||||||||||| |||||||    
T  37288916 ctcctttttataaactcttctcaagaatcatatctatccgatgtgggactaaatcccaccgattgttggc 37288985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 53739933 - 53739868
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| || |||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||    
T  53739933 tgaggagttcctcctctttataaactcttctcaagagtactatctatccgatatgggactaaatcc 53739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 15665221 - 15665155
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||| ||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  15665221 gtgaggagtgcctcctctatataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 15665155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 22867152 - 22867086
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||  |||||||||||||    
T  22867152 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgacgtgggactaaatcc 22867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 29669714 - 29669780
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  29669714 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatctgatgtgggactaaatcc 29669780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 45426972 - 45427038
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||| ||||||||    
T  45426972 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtggggctaaatcc 45427038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 990615 - 990551
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaat 101  Q
    |||||| ||||||||||||||| |||||| ||||||| |  |||||||||||| |||||||||||    
T  990615 gtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgggactaaat 990551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 29734629 - 29734565
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaat 101  Q
    |||||| |||||||||||||| ||||||| ||||| | | ||||||||||||| |||||||||||    
T  29734629 gtgaggagtgcctcctctttaataactcttctcaaaagtcctatctatccgatgtgggactaaat 29734565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 43972423 - 43972359
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaat 101  Q
    |||||| ||||||||||||||| |||| | ||||||| | ||||||||||||| |||||||||||    
T  43972423 gtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatgtgggactaaat 43972359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 50858394 - 50858330
Alignment:
Q  39 gaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  50858394 gaggagtgcctcctctttataaactcttctcaagagtactatctatctgatgtgggactaaatcc 50858330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 5427196 - 5427113
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| ||| ||||||||||| |||||| ||||| |||  ||||||||| || |||| ||||| |||||| ||||||||||||    
T  5427196 gtgaggagtgtctcctctttataaactcttctcaaaaatcttatctatccaatgtggggctaaaccccaccaagtgttggccgc 5427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 991272 - 991206
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| |||||||||| |||| |||||| ||||||| |  |||||||||||| |||||||||||||    
T  991272 gtgaggagtgcctcctcattataaactcttctcaagagtgttatctatccgatgtgggactaaatcc 991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 51470551 - 51470485
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| | |||||||| |||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  51470551 gtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 51470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 56509676 - 56509611
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| ||||||||||||||| |||||| ||||||  | ||||||||||||| | |||||||||||    
T  56509676 tgaggagtgcctcctctttataaactcttctcaagggtcctatctatccgatgtaggactaaatcc 56509611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 43798163 - 43798242
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| || ||||| ||| || |||||| ||||||||| |||| |||||||| ||||||||||| |||| ||||||||||    
T  43798163 gtgaggagtacctccccttaataaactcttctcaagaatcctatatatccgatgtgggactaaat-ccactgagtgttggc 43798242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 47845839 - 47845775
Alignment:
Q  54 tttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    ||||| |||||| ||||||||  ||||||||||||  ||||||||||||||| ||||||||||||    
T  47845839 tttataaactcttctcaagaaacctatctatccgacgtgggactaaatcccacccgagtgttggc 47845775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 991105 - 991054
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccga 88  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||    
T  991105 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccga 991054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 49544401 - 49544334
Alignment:
Q  36 tgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||| ||| ||||||||||| |||||| |||||||||  |||||||||||| ||| || ||||||    
T  49544401 tgtgaggagtgtctcctctttataaactcttctcaagaatcttatctatccgatgtggaacaaaatcc 49544334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 13254451 - 13254385
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||| ||||||| |||||| ||||| | | |||||||||| || |||||||||||||    
T  13254451 gtgaggagtgcctcatctttataaactcttctcaatagtcctatctatccaatgtgggactaaatcc 13254385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 27048444 - 27048510
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||  | ||||||| ||||| |||||||||||||    
T  27048444 gtgaggagtgcctcctctttataaactcttatcaagcttcctatctaaccgatgtgggactaaatcc 27048510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 43972107 - 43972041
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||| ||||||||||| |||||| ||||||| | |||||||||| |  |||||||||||||    
T  43972107 gtgaggagtgtctcctctttatcaactcttctcaagagtcctatctatccaacgtgggactaaatcc 43972041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 48843053 - 48843119
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||| | ||||||||| |||  ||||||||||||    
T  48843053 gtgaggagtgcctcctctttataaactcttttcaagagtcctatctatctgatgcgggactaaatcc 48843119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 50858080 - 50858014
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| || |||| ||||||| || ||| ||||||| | ||||||||||||| |||||||||||||    
T  50858080 gtgaggagtacctcttctttataaaatcttctcaagagtactatctatccgatgtgggactaaatcc 50858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 21644531 - 21644483
Alignment:
Q  69 caagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    ||||||| ||||||||| ||| ||||| ||||||||||||| |||||||    
T  21644531 caagaatcctatctatctgatgtgggattaaatcccaccgactgttggc 21644483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 43943733 - 43943681
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  43943733 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 165868 - 165769
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||| | ||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  165868 aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagaattctatctatccgatgtaggactaaatcccctcgagtgttggccgc 165769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 1e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 10450444 - 10450541
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||||| |||||| |||||| |||||||||| |||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  10450444 aaaaccagcttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggc 10450541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 10450668 - 10450765
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||||    
T  10450668 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttggc 10450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 9178964 - 9178893
Alignment:
Q  48 ctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccg 119  Q
    ||||||||||| |||||| || |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  9178964 ctcctctttataaactcttcttaagaatcctatctatccgatatgggactaaattccaccgagtgttggccg 9178893  T

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Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 9180452 - 9180353
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||||| |||||| |||||| ||| ||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||||| | |||| |||||||||    
T  9180452 aaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatctatccgatgtgggactaaatccgatcgagggttggccgc 9180353  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 11244561 - 11244656
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttg 115  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||| ||||||||||    
T  11244561 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtgggactaaatcccacccgagtgttg 11244656  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 24453862 - 24453763
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| ||||||||| ||||| |||||| ||||||||  ||||||||||||| ||||||||||||||  ||||||||||||||    
T  24453862 aaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatctatccgatgtgggactaaatcccctcgagtgttggccgc 24453763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 53966300 - 53966217
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccgc 120  Q
    ||||| ||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||    
T  53966300 tgaggagtgcctcctctttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagagttggccgc 53966217  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 48511659 - 48511745
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| | |||||| |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||||||    
T  48511659 aaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacc 48511745  T

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Target: chr3; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 15820625 - 15820722
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| | |||||| |||||| ||| |||||| |||| |||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  15820625 aaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatctatccgatgtgggactaaatcccacccgagtgttggc 15820722  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 48511430 - 48511530
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggccg 119  Q
    |||||| | |||||| ||||||  |||||||||||||| |||||| ||||||| | ||||||||||||| ||||||||||||||| ||||| ||||||||    
T  48511430 aaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgtgggactaaatcccacccgagagttggccg 48511529  T
Q  120 c 120  Q
    |    
T  48511530 c 48511530  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 9179201 - 9179118
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| |||| |||||||||| |||||| |||| ||||  | |||||||||| ||||||||||||||||||||||||||||||    
T  9179201 gtgaggagtgcatcctctttataaactcttctcatgaatcatgtctatccgatgtgggactaaatcccaccgagtgttggccgc 9179118  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 16060905 - 16061004
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||||| |||||| |||| | ||| ||| ||||||| |||||| |||||||||  ||| |||||||| ||||||||||||||| ||||||||||||||    
T  16060905 aaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattatatatccgatgtgggactaaatcccatcgagtgttggccgc 16061004  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 54369122 - 54369041
Alignment:
Q  22 aaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| |||||||  |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  54369122 aaaccggtttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgggactaaatcc 54369041  T

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Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 10453739 - 10453818
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| ||||||||||||||| ||| || ||||||||| ||||||||||||| ||||||||||| ||||| |||||||||    
T  10453739 gtgaggagtgcctcctctttataaacccttctcaagaatcctatctatccgatctgggactaaat-ccaccaagtgttggc 10453818  T

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Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 10856669 - 10856745
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||||||||| ||||||  |||||||| ||||| ||||||| ||||||||||||||||| ||| ||||||||    
T  10856669 gtgcctcctctttataaactcttttcaagaatcctatccatccgatgtgggactaaatcccaccaagtattggccgc 10856745  T

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Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 48837044 - 48837124
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| ||| ||||||| |||  ||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  48837044 gtgaggagtgtctcctctatatatactcttctcaataatcctatctatccgatgtgggactaaatcccaccgagtgttggc 48837124  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 40769932 - 40770031
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||| | |||||| |||||| ||| ||||||||||| |||||| | ||| |||  |||||||||||| ||||||||||||||  ||||||||||||||    
T  40769932 aaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatctatccgatgtgggactaaatcccctcgagtgttggccgc 40770031  T

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Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 13769311 - 13769393
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||| |||||  |||||| ||||||||||||||| |||||| ||||||| | |||||||||| || |||||||||||||    
T  13769311 aaaaccagcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatcc 13769393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 27219397 - 27219331
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  27219397 gtgaggagtgcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 27219331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 44573394 - 44573328
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  44573394 gtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgtgggactaaatcc 44573328  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 16045390 - 16045489
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    |||||||| ||||||  ||| | ||| ||| | ||||| |||||| |||||||||  ||| |||||||| ||||||||||||||| ||||||||||||||    
T  16045390 aaaaccagcttgtacgatgaagagtgtctcatatttataaactcttctcaagaatattatatatccgatgtgggactaaatcccatcgagtgttggccgc 16045489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 47833689 - 47833764
Alignment:
Q  28 gtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||  |||||| ||||||||||||||| ||| || ||||||| | ||||||||||||| |||||||||||||    
T  47833689 gtttgtaaggtgaggagtgcctcctctttataaacacttctcaagagtcctatctatccgatgtgggactaaatcc 47833764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 34715491 - 34715557
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||| | | ||||||||||||| |||||||||||||    
T  34715491 gtgaggagtgcctcctctttataaactcttctcaaaagtgctatctatccgatgtgggactaaatcc 34715557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42190495 - 42190596
Alignment:
Q  19 ataaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatccca-ccgagtgttggc 117  Q
    |||||| | |||||||| |||| | |||||||||||| || |||||| ||||||| | ||||||||||||| ||||| ||||||||| ||||| ||||||    
T  42190495 ataaaatcggtttgtacggtgaagagtgcctcctctt-ataaactcttctcaagattcctatctatccgatgtgggattaaatcccacccgagagttggc 42190593  T
Q  118 cgc 120  Q
    |||    
T  42190594 cgc 42190596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 43101407 - 43101473
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| | ||||||||| ||| |||||||||||||    
T  43101407 gtgaggagtgcctcctctttataaactcttctcaagagtcctatctatctgatgtgggactaaatcc 43101473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 51734611 - 51734672
Alignment:
Q  55 ttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||| |||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  51734611 ttataaactcttctcaagaatcctatctatccgatgtgggactaaat-ccaccgagtgttggc 51734672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 41380783 - 41380726
Alignment:
Q  46 gcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||| |||||| ||||||| | ||||||||||||| |||||||||||||    
T  41380783 gcctcctctttataaactcttctcaagagtgctatctatccgatgtgggactaaatcc 41380726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 22666347 - 22666419
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatc 102  Q
    |||||| |||||| ||| | ||||||||| |||||| ||||||||| ||||||||||||  ||||||||||||    
T  22666347 ttgtacggtgaggagtgacgcctctttataaactcttctcaagaatcctatctatccgacgtgggactaaatc 22666419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 45443341 - 45443282
Alignment:
Q  44 gtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||||||||||||| |||||| ||||||| | |||||||||| || |||||||||||||    
T  45443341 gtgcctcctctttataaactcttctcaagagtgctatctatccaatgtgggactaaatcc 45443282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 44573707 - 44573641
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| |||||| ||||||| || ||||||||  || |||||||||||||    
T  44573707 gtgaggagtgcctcctctttataaactcttctcaagatttttatctatcttatgtgggactaaatcc 44573641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 48685353 - 48685419
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||| ||||||||||| |||||| ||||||| | |||| |||||||| |||||||||||||    
T  48685353 gtgaggagtgtctcctctttataaactcttctcaagagtactatatatccgatgtgggactaaatcc 48685419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 16051586 - 16051654
Alignment:
Q  52 tctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||| |||||| |||||||||  ||| |||| ||| |||||||||||||||  |||||||||||||    
T  16051586 tctttataaactcttctcaagaatattatatatctgatgtgggactaaatcccattgagtgttggccgc 16051654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 24860088 - 24860162
Alignment:
Q  28 gtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||||  |||||| ||||||||||||||| |||||| ||||||| | |||| |||||||| | |||||||||||    
T  24860088 gtttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatttatccgatgt-ggactaaatcc 24860162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 42576345 - 42576278
Alignment:
Q  51 ctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||||| |||||| ||  |||||  |||| ||||||| ||||||||||||||||| ||||||||||    
T  42576345 ctctttataaactcttcttgagaatcttatcaatccgatgtgggactaaatcccaccaagtgttggcc 42576278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 100
Target Start/End: Original strand, 50203893 - 50203956
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaa 100  Q
    |||||| ||||||||||||||| |||||| ||||||| |  |||||||||||| || |||||||    
T  50203893 gtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagactaaa 50203956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 3985841 - 3985775
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| |||| |||||||||| |||||| ||||| | |  |||||||||||| |||||||||||||    
T  3985841 gtgaggagtgcttcctctttataaactcttctcaaaagtcatatctatccgatgtgggactaaatcc 3985775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 10453924 - 10454000
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggc 117  Q
    |||||| ||||||||||||||   ||||| |||| |||| |||| |||||||| ||||||||||| |||| ||||||||||    
T  10453924 gtgaggagtgcctcctcttta---actcttctcatgaatcctatttatccgatgtgggactaaat-ccactgagtgttggc 10454000  T

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Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Original strand, 14170035 - 14170101
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| || ||| ||||||| |  ||| |||||||| |||||||||||||    
T  14170035 gtgaggagtgcctcctctttataaaatcttctcaagagtgttatttatccgatgtgggactaaatcc 14170101  T

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Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 21750543 - 21750477
Alignment:
Q  37 gtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    |||||| ||||||||||||||| ||||||  |||||  | ||||||| ||||| |||||||||||||    
T  21750543 gtgaggagtgcctcctctttataaactctgatcaagcttcctatctaaccgatgtgggactaaatcc 21750477  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 2800013 - 2800073
Alignment:
Q  53 ctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgtt 114  Q
    |||||| |||||  || |||||| ||||||||||||| ||||||||||| ||||||||||||    
T  2800013 ctttataaactcatcttaagaatcctatctatccgatgtgggactaaat-ccaccgagtgtt 2800073  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 4256301 - 4256236
Alignment:
Q  38 tgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcc 103  Q
    ||||| ||| ||||||||||| |||||| ||||||| |  |||| ||||||| |||||||||||||    
T  4256301 tgaggagtgtctcctctttataaactcttctcaagagtgttatccatccgatgtgggactaaatcc 4256236  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 5321584 - 5321637
Alignment:
Q  49 tcctctttattaactctcctcaagaattctatctatccgatatgggactaaatc 102  Q
    |||||||||| ||||||  |||| ||| ||||||||||||| ||||||||||||    
T  5321584 tcctctttataaactcttttcaaaaatcctatctatccgatgtgggactaaatc 5321637  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 39078815 - 39078867
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  | ||||||||||||||||||    
T  39078815 tgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggact 39078867  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 42258970 - 42258918
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    ||||||||||||||  ||||| |||||||||  |||||||||||| |||||||    
T  42258970 tgcctcctctttatatactcttctcaagaatcttatctatccgatgtgggact 42258918  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 49477594 - 49477542
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  49477594 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 49477542  T

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Target: scaffold0785 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 3138 - 3237
Alignment:
Q  19 ataaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttggcc 118  Q
    |||||||||| || ||  |||||| ||| ||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||| |||  |||||||    
T  3138 ataaaaccagcttctatggtgaggagtgtctcctctttataaactcttctcaaaaattctatctatccgatgtgggactaaatcccaacgaccgttggcc 3237  T

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Target: scaffold0785; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 120
Target Start/End: Original strand, 2986 - 3015
Alignment:
Q  91 tgggactaaatcccaccgagtgttggccgc 120  Q
    ||||||||||||||||||||||||||||||    
T  2986 tgggactaaatcccaccgagtgttggccgc 3015  T

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Target: scaffold0166 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 34670 - 34755
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccacc 107  Q
    |||||| |||||||  |||||| |||||||||||| || |||||| ||||||| | |||||||||||||||||||||||||| ||||    
T  34670 aaaaccggtttgtaaggtgaggagtgcctcctctt-ataaactcttctcaagattcctatctatccgatatgggactaaatctcacc 34755  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 43795 - 43710
Alignment:
Q  30 ttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggactaaatcccaccgagtgttgg 116  Q
    |||||| |||||| |||  |||||||||| |||||| ||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||    
T  43795 ttgtacggtgaggagtgtttcctctttataaactcttctcaagaatcctatctatctgatgtggtactaa-tcccaccgagtgttgg 43710  T

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Target: scaffold0989 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 2967 - 3043
Alignment:
Q  21 aaaaccagtttgtactgtgaggtgtgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||| |||||  ||||||  |||||||||||||| |||||| ||||||| |  | |||||||||| |||||||    
T  2967 aaaaccagcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggact 3043  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 76912 - 76860
Alignment:
Q  45 tgcctcctctttattaactctcctcaagaattctatctatccgatatgggact 97  Q
    |||||||||||||| |||||| ||||||| |  |||||||||||| |||||||    
T  76912 tgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 76860  T

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