View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_low_63 (Length: 282)

Name: NF7636_low_63
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_low_63
NF7636_low_63
[»] chr3 (15 HSPs)
chr3 (1-276)||(20045759-20046034)
chr3 (1-260)||(19818209-19818468)
chr3 (14-276)||(20016419-20016681)
chr3 (1-266)||(19838030-19838295)
chr3 (1-260)||(19955727-19955986)
chr3 (1-257)||(19811935-19812191)
chr3 (14-262)||(19989172-19989420)
chr3 (13-260)||(20036825-20037072)
chr3 (14-260)||(26646662-26646908)
chr3 (14-222)||(19853202-19853410)
chr3 (13-260)||(19848639-19848886)
chr3 (46-137)||(24840226-24840317)
chr3 (40-133)||(20005231-20005324)
chr3 (46-133)||(19943498-19943585)
chr3 (179-233)||(19950803-19950857)
[»] chr4 (2 HSPs)
chr4 (14-131)||(6398042-6398159)
chr4 (1-95)||(6397945-6398039)
[»] chr1 (1 HSPs)
chr1 (15-158)||(1716968-1717111)
[»] chr8 (1 HSPs)
chr8 (82-137)||(22652376-22652431)
[»] chr5 (1 HSPs)
chr5 (1-158)||(26355134-26355291)


Alignment Details
Target: chr3 (Bit Score: 248; Significance: 1e-138; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 20046034 - 20045759
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  20046034 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgttgtctcaccaaagggaaaaataa 20045935  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20045934 atgtatttgtatcacaacaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 20045835  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 276  Q
    |||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20045834 aacttccttccacaccgattcaaattttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 20045759  T

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Target: chr3; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 19818468 - 19818209
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||| |||||||| |||| ||||||||| || || || |  |||||||| ||||||| ||    
T  19818468 tctttaactttgatgaaaacaggatcaccaatgataggataaccccccaaaactatgacatcctccaaagtgatagttgcctcaccaaatggaaaaacaa 19818369  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    | ||||| || ||||| ||||||||||| ||||||||   ||| ||||| ||||||||| ||||| | || || |   |||||||||| ||||||||||     
T  19818368 aggtgttagtctcacaacaccatttctcaacaaccccaaatagcaagttttgatttttatgaatgtagcatttagtactcataatagcatcaaagattct 19818269  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    | ||| |||||| || |||||| |||||||||| |||| ||||| |||||||| ||||||    
T  19818268 agctttcttccacacagattcatactttggtttaagttcatcaacccaactaaaccattt 19818209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 14 - 276
Target Start/End: Original strand, 20016419 - 20016681
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||||||||||| ||||||||| |||||||| || ||||||||||| || ||||| | |||| |||| ||||| | |||||| ||||| |     
T  20016419 tgaaaacaggatcgccaatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtatttgtctt 20016518  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    | | |||||||||||| ||||| | | ||| ||||| |||||| | || |||| |||||| | | |||||||||| |||||||||||||| | ||||||     
T  20016519 agaacaccatttctccgcaacctcatatagcaagttttgatttctcagtatgcgacacttggtgctcataatagcatcaaagattccaacctgcttccac 20016618  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccatttttgttgagggtggcgc 276  Q
    || |||||| |||||| ||| || | ||||| ||||| ||||||||| | ||| |||||||||    
T  20016619 acagattcatactttgttttaagctgatcaacccaacaaacccatttgtcttgtgggtggcgc 20016681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 19838295 - 19838030
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||| |||| ||||||||||  ||| ||||||| ||||||||| |||||||| |||| ||| ||||| || ||||| |  |||||||| ||||| | ||    
T  19838295 tctttgacttcggtgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaa 19838196  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| || || ||||||||||||||||| |||||  |   ||  ||||| | ||||||| ||||| | || || |   |||| ||||| |||||||||||    
T  19838195 atgtattggtctcacagcaccatttctcaacaacttcaaataacaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattcc 19838096  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccatttttgttg 266  Q
    ||||| | ||||||| |||||| |||||||||| || ||||||| ||||| ||||||||| |||||    
T  19838095 aactttcctccaaacagattcatactttggtttaagcttatcaacccaacaaacccatttgtgttg 19838030  T

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Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 19955986 - 19955727
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    ||||| |||| ||||||||||  ||| ||||||| ||||||||| |||||||| |||| ||| ||||| || ||||| |  |||||||| ||||| | ||    
T  19955986 tctttgacttcggtgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaa 19955887  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    |||| ||||| ||||| ||||||||||| ||||| ||   ||| ||||| | ||||||| ||||| | || || |   |||| ||||| |||||||||||    
T  19955886 atgtatttgtctcacaacaccatttctcaacaactccaaatagcaagtttttatttttatgaatgtagcatttagtactcattatagcatcaaagattcc 19955787  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    ||||| | ||||||| |||||| ||||| |||| ||||||| || ||||  |||||||||    
T  19955786 aactttcctccaaacagattcatacttttgtttaagtttatgaacccaagaaacccattt 19955727  T

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Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 19812191 - 19811935
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||| ||||||||| |||| | |||| ||||||||||||||||| |||||||| || ||||||||||| || || || | ||||||||| ||||||| ||    
T  19812191 tcttgaactttggtaaaaataggatcaccaatgatagggtaaccccccaaaaccataatatcctccaaagtgatagttgcttcaccaaatggaaaaacaa 19812092  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattcc 200  Q
    | ||||| || ||||| ||||||||||| ||||||||    || || ||  ||||||| || |||  |||||| |   |||||||||| ||||||||||     
T  19812091 aggtgttagtctcacaacaccatttctcaacaaccccaaagagcaattttagatttttgagtatgtgacacttggtactcataatagcatcaaagattct 19811992  T
Q  201 aacttccttccaaactgattcaaactttggtttgagtttatcaagccaactaaccca 257  Q
    | ||| |||||| |  |||||| |||||||||| || | ||||| ||| ||||||||    
T  19811991 agctttcttccacaaagattcatactttggtttaagctcatcaacccatctaaccca 19811935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 262
Target Start/End: Complemental strand, 19989420 - 19989172
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||| ||||  ||||||||||| || ||||| || | ||| ||||| || || || |  |||||||| ||||||| |||||||||||| ||    
T  19989420 tgaaaacaggatcaccaagaatagggtaaccccctaaaaccataacatcttccaaagtgatagttgcctcaccaaatggaaaaacaaatgtgtttgtctc 19989321  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    ||| ||||||||||| ||||||||   ||| ||||| |||| |||    ||||||||||| |   ||||||||||||||||||| ||||||| ||||||     
T  19989320 acaacaccatttctcaacaaccccaaatagcaagttatgatctttctttatgcaacacttggtactcataatagcttcaaagatgccaactttcttccac 19989221  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccattttt 262  Q
    ||  ||||||| || ||||| |||| ||||| ||||  |||||||||||    
T  19989220 acatattcaaatttgggtttaagttgatcaacccaataaacccattttt 19989172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 260
Target Start/End: Original strand, 20036825 - 20037072
Alignment:
Q  13 gtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtat 112  Q
    ||||||||| |||| ||||  | ||| |||||||| | ||| ||||||||||||||  | | ||| | ||||||||||| ||| | |||||| ||||| |    
T  20036825 gtgaaaacaggatcaccaagaacaggataacctcctagaaccatgatatcctccaaaatgactgttgcttcaccaaaggaaaacacaaatgtatttgtct 20036924  T
Q  113 cacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttcca 212  Q
       | |||||||||||||||||||| | ||| ||||| |||| |||| | ||| ||||||| | |  ||||||||| |||||||||||||||| ||||||    
T  20036925 tggaacaccatttctccacaaccccatatagcaagttttgatctttatgtatgtaacacttagtggccataatagcatcaaagattccaactttcttcca 20037024  T
Q  213 aactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
     || |||||| | ||| |||| ||||||| || ||||  |||||||||    
T  20037025 cacagattcatagttttgtttaagtttatgaacccaagaaacccattt 20037072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 260
Target Start/End: Complemental strand, 26646908 - 26646662
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| |||| ||||| ||||| ||||| |||||||| |||||||||||||| || || || | ||||||||||| ||  | ||| || ||||| ||    
T  26646908 tgaaaacaggatccccaataataggataaccccccaaaaccatgatatcctccaaagtaatagttgcttcaccaaaggcaatcacaaaggtatttgtctc 26646809  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    ||| ||||||||||| || ||||| | ||| ||||  ||||||||| | ||||  ||| ||| |  ||| || ||||||||||| ||||||| ||||||     
T  26646808 acaacaccatttctcaactaccccatatagcaagtcatgatttttatgtatgcggcaccttgtgcccattattgcttcaaagatgccaactttcttccac 26646709  T
Q  214 actgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
    |||| |||| | ||  |||| |||| ||||| ||| |||||||||||    
T  26646708 actgtttcatatttgagtttaagttgatcaacccatctaacccattt 26646662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 19853410 - 19853202
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||| | |||| ||||||||||||||||| |||||||| || | ||||||||| |||||||| | ||||||||| || || | |||||| || || ||    
T  19853410 tgaaaataggatcaccaatgatagggtaaccccccaaaaccataacatcctccaaagttattgttgcttcaccaaatgggaacacaaatgtattggtctc 19853311  T
Q  114 acagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttccaa 213  Q
    | | |||||||| || ||||||||   ||  ||||| |||| |||    ||||| | ||| |   |||||||||| |||||||||||||||| ||||||     
T  19853310 agaacaccatttgtcaacaaccccacataacaagttttgatctttctttatgcagctcttagtactcataatagcatcaaagattccaactttcttccat 19853211  T
Q  214 actgattca 222  Q
    | |||||||    
T  19853210 agtgattca 19853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 260
Target Start/End: Complemental strand, 19848886 - 19848639
Alignment:
Q  13 gtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtat 112  Q
    ||||||||| |||| ||||  | ||| ||||| || | ||| |||||||||||||| || ||||| | ||||||||||| ||| | ||| || |||||||    
T  19848886 gtgaaaacaggatcaccaagaacaggataaccccctagaaccatgatatcctccaaagtgattgttgcttcaccaaaggaaaacacaaaggtatttgtat 19848787  T
Q  113 cacagcaccatttctccacaaccccttgtagtaagttctgatttttaagaatgcaacactttgagttcataatagcttcaaagattccaacttccttcca 212  Q
     |   ||||||||||| || |||||   ||| ||||| |||||||||   | | | ||||| | |  ||||||||| |||||||||||||||| ||||||    
T  19848786 taggacaccatttctcaactaccccaactagcaagttttgatttttatttaagtagcacttagtggccataatagcatcaaagattccaactttcttcca 19848687  T
Q  213 aactgattcaaactttggtttgagtttatcaagccaactaacccattt 260  Q
     || |||||| | ||| |||| ||||||| || ||||  |||||||||    
T  19848686 cacagattcatagttttgtttaagtttatgaacccaagaaacccattt 19848639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 24840226 - 24840317
Alignment:
Q  46 cccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaacccc 137  Q
    ||||||||||||| ||||||||| || ||||| | |||||||||  |||| |  || |||||||| ||||| ||||||||||| ||||||||    
T  24840226 cccaaaacaatgacatcctccaaagtgattgttgcttcaccaaatagaaacacgaaggtgtttgtttcacaacaccatttctcaacaacccc 24840317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 20005231 - 20005324
Alignment:
Q  40 taacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaa 133  Q
    ||||| ||||||||||||| ||| ||||| || ||||| | |||||||||  |||| | ||| |||||||| ||||| ||||||||||| ||||    
T  20005231 taaccccccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctcaacaa 20005324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 19943585 - 19943498
Alignment:
Q  46 cccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaa 133  Q
    ||||||||||||| ||| ||||| || ||||| | |||||||||  |||| | ||| |||||||| ||||| ||||||||||| ||||    
T  19943585 cccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctcaacaa 19943498  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 19950857 - 19950803
Alignment:
Q  179 tcataatagcttcaaagattccaacttccttccaaactgattcaaactttggttt 233  Q
    |||||||||| |||||||||||| ||| |||||| || |||||| ||||||||||    
T  19950857 tcataatagcatcaaagattccagctttcttccacacagattcatactttggttt 19950803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 6398159 - 6398042
Alignment:
Q  14 tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatc 113  Q
    |||||||| ||| ||||||||| ||||| || ||||||| ||||||||||| ||| |||||||| |  ||||||||||||||||  |||||||||||||     
T  6398159 tgaaaacaagattgccaatgatcgggtatccccccaaaataatgatatccttcaaagttattgttgcctcaccaaagggaaaaaggaatgtgtttgtatt 6398060  T
Q  114 acagcaccatttctccac 131  Q
    ||| ||||||||| ||||    
T  6398059 acatcaccatttccccac 6398042  T

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Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6397945 - 6398039
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaa 95  Q
    |||||||||| |||||||||| |||| ||| ||||||||||  | ||||| ||||||||||||||||| |||||||| |  ||||||||||||||    
T  6397945 tctttaacttgggtgaaaacaggatccccagtgatagggtagacccccaagacaatgatatcctccaaagttattgttgcctcaccaaagggaaa 6398039  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 1717111 - 1716968
Alignment:
Q  15 gaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataaatgtgtttgtatca 114  Q
    ||||||| |||| ||||||| ||||||| | || ||||| || ||||||||||| || ||||| | ||||||||| ||||| | |||||| ||||| |||    
T  1717111 gaaaacaggatcaccaatgacagggtaatcccctaaaaccataatatcctccaaagtgattgtggcttcaccaaaaggaaacacaaatgtatttgtctca 1717012  T
Q  115 cagcaccatttctccacaaccccttgtagtaagttctgattttt 158  Q
    || |||||||| || |||| ||| | ||  ||||| ||||||||    
T  1717011 caacaccatttttcaacaatcccatataacaagttttgattttt 1716968  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 22652376 - 22652431
Alignment:
Q  82 tcaccaaagggaaaaataaatgtgtttgtatcacagcaccatttctccacaacccc 137  Q
    |||||||| ||||| | ||||| |||||| ||||||||||||||||| ||||||||    
T  22652376 tcaccaaatggaaacacaaatgagtttgtctcacagcaccatttctcaacaacccc 22652431  T

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Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26355134 - 26355291
Alignment:
Q  1 tctttaactttggtgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgtcgtttcaccaaagggaaaaataa 100  Q
    |||||||| || | ||||| | |||| ||||||| ||||||||| || | ||| || | |||||||||   ||  ||||  |||||||| ||||| | ||    
T  26355134 tctttaacattcgcgaaaataggatcaccaatgacagggtaacccccaagaaccataacatcctccaaacctaccgtcgcctcaccaaacggaaacacaa 26355233  T
Q  101 atgtgtttgtatcacagcaccatttctccacaaccccttgtagtaagttctgattttt 158  Q
    |||| || || ||||| |||||||||||||||||||| |  || ||||| ||||||||    
T  26355234 atgtattagtctcacaacaccatttctccacaaccccgtaaagcaagttttgattttt 26355291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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