View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_low_65 (Length: 270)
Name: NF7636_low_65
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 46724106 - 46723875
Alignment:
| Q |
14 |
ttcttgttcaatcctgtaaagaatataaatcaatacacaaaatcaaatcagtaacaaagtaattagggaagaacaaaatagcctaaatgcagataaaaac |
113 |
Q |
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| T |
46724106 |
ttcttgttcaatcctgtaaagaatataaatcaatacacaaaatcaaatcagtaacaaagtaattagggaagaacaaaatagccaaaatgcagataaaaac |
46724007 |
T |
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| Q |
114 |
acatagataacagaagtctttacgattcttgcgcagctatatcaaaggcgacttcaggaggagcaagagcaggcatttccacaaagtgaaggttcatatt |
213 |
Q |
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| T |
46724006 |
acata---------agtccttacgattcttgcgcagctatatcaaaggcgacttcaggaggagcaagagcaggcatctccacaaagtgaaggttcatatt |
46723916 |
T |
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| Q |
214 |
actggaaattggaatcataacacgaatcagtaaataatttg |
254 |
Q |
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| T |
46723915 |
actggaaattggaatcataacacgaatcagtaaataatttg |
46723875 |
T |
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