View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7636_low_67 (Length: 266)

Name: NF7636_low_67
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7636_low_67
NF7636_low_67
[»] chr8 (9 HSPs)
chr8 (129-248)||(39431479-39431595)
chr8 (49-146)||(27321753-27321850)
chr8 (22-77)||(13243210-13243265)
chr8 (60-107)||(24965150-24965197)
chr8 (49-107)||(36406419-36406477)
chr8 (49-100)||(28928187-28928238)
chr8 (36-95)||(34282802-34282861)
chr8 (20-83)||(34282835-34282898)
chr8 (53-146)||(3383910-3384003)
[»] chr4 (14 HSPs)
chr4 (22-107)||(52373855-52373940)
chr4 (49-107)||(46645731-46645789)
chr4 (49-107)||(10715784-10715842)
chr4 (49-107)||(10929554-10929612)
chr4 (49-107)||(40969352-40969410)
chr4 (49-107)||(43003114-43003172)
chr4 (61-146)||(31364254-31364339)
chr4 (36-107)||(9003670-9003741)
chr4 (49-107)||(4728686-4728744)
chr4 (61-107)||(10058656-10058702)
chr4 (49-107)||(50099998-50100056)
chr4 (60-146)||(14044463-14044549)
chr4 (60-101)||(25237727-25237768)
chr4 (60-100)||(2521835-2521875)
[»] chr3 (7 HSPs)
chr3 (22-107)||(41218285-41218370)
chr3 (49-107)||(7501089-7501147)
chr3 (49-102)||(43700128-43700181)
chr3 (60-107)||(53987975-53988022)
chr3 (49-146)||(33178983-33179080)
chr3 (61-107)||(26370972-26371018)
chr3 (61-107)||(37516766-37516812)
[»] chr2 (13 HSPs)
chr2 (20-101)||(17148895-17148976)
chr2 (53-107)||(29257498-29257552)
chr2 (20-107)||(45444383-45444466)
chr2 (36-146)||(303982-304092)
chr2 (60-146)||(17249469-17249555)
chr2 (49-100)||(18299079-18299130)
chr2 (61-107)||(22572651-22572697)
chr2 (49-107)||(41010640-41010698)
chr2 (49-107)||(41114799-41114857)
chr2 (60-146)||(2475945-2476031)
chr2 (49-101)||(6799821-6799873)
chr2 (20-77)||(25563050-25563107)
chr2 (49-146)||(13203895-13203992)
[»] chr6 (12 HSPs)
chr6 (50-146)||(15122172-15122268)
chr6 (49-137)||(9696183-9696271)
chr6 (49-141)||(14938818-14938910)
chr6 (49-146)||(2960800-2960897)
chr6 (22-82)||(34188899-34188959)
chr6 (49-133)||(2836071-2836155)
chr6 (49-107)||(2941350-2941408)
chr6 (49-107)||(23663689-23663747)
chr6 (49-107)||(34248943-34249001)
chr6 (61-146)||(1780934-1781019)
chr6 (49-107)||(10397739-10397797)
chr6 (49-107)||(28614334-28614392)
[»] chr5 (20 HSPs)
chr5 (49-107)||(15675440-15675498)
chr5 (22-107)||(767398-767483)
chr5 (22-107)||(13942683-13942767)
chr5 (36-107)||(15504063-15504134)
chr5 (49-152)||(14832696-14832799)
chr5 (49-107)||(35469030-35469088)
chr5 (36-146)||(6900881-6900991)
chr5 (26-107)||(36234485-36234566)
chr5 (36-107)||(7162014-7162085)
chr5 (36-107)||(32953598-32953669)
chr5 (60-107)||(37552052-37552099)
chr5 (60-107)||(37654882-37654929)
chr5 (49-107)||(1672417-1672475)
chr5 (36-146)||(16567905-16568015)
chr5 (20-107)||(12267313-12267399)
chr5 (53-107)||(2476496-2476550)
chr5 (49-107)||(30249092-30249150)
chr5 (61-107)||(33007025-33007071)
chr5 (53-107)||(34444097-34444151)
chr5 (61-107)||(34846485-34846531)
[»] chr1 (12 HSPs)
chr1 (61-146)||(9527196-9527281)
chr1 (49-107)||(14727457-14727515)
chr1 (36-146)||(4774086-4774196)
chr1 (49-107)||(27460806-27460864)
chr1 (49-102)||(4641972-4642025)
chr1 (22-107)||(49898492-49898573)
chr1 (53-107)||(25007595-25007649)
chr1 (49-83)||(27583967-27584001)
chr1 (61-107)||(31844571-31844617)
chr1 (61-107)||(33468901-33468947)
chr1 (53-107)||(37153920-37153974)
chr1 (53-107)||(44305543-44305597)
[»] chr7 (10 HSPs)
chr7 (24-107)||(4843422-4843505)
chr7 (60-146)||(3012460-3012546)
chr7 (50-146)||(21932633-21932729)
chr7 (60-107)||(22206616-22206663)
chr7 (60-107)||(22228076-22228123)
chr7 (22-83)||(19377511-19377573)
chr7 (63-146)||(26722850-26722933)
chr7 (61-107)||(28693933-28693979)
chr7 (49-85)||(21688276-21688312)
chr7 (60-100)||(25688148-25688188)
[»] scaffold0618 (1 HSPs)
scaffold0618 (53-107)||(1827-1881)
[»] scaffold0638 (1 HSPs)
scaffold0638 (61-107)||(4217-4263)
[»] scaffold0075 (1 HSPs)
scaffold0075 (53-107)||(11655-11709)
[»] scaffold0021 (1 HSPs)
scaffold0021 (59-107)||(109234-109282)


Alignment Details
Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 39431595 - 39431479
Alignment:
Q  129 aaatttctgactctgccaatgc-tatagctaacttgttcatattaattatatggtggagaatgatgaaccaagccaattatcaatctagcaaaaaaccat 227  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    ||| |||||||||||||||||||||||||||    
T  39431595 aaatttctggctccgccaatgcctatagctaacttgttcatattaattatatggtggagaatgat----caaaccaattatcaatctagcaaaaaaccat 39431500  T
Q  228 aaatcatgagagactagacat 248  Q
    |||||||||||||||||||||    
T  39431499 aaatcatgagagactagacat 39431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 27321850 - 27321753
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||| ||| |||||||||||||||||||| ||| ||||||| |||||| ||||       || ||  |||||||||||||||| ||||||||    
T  27321850 gaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggctctgcca 27321753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 13243210 - 13243265
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattat 77  Q
    ||||||||||||| |||||||||| | |||||||||  ||||||||||||||||||    
T  13243210 taggattttaggatccgcaagaaatgtgaaattatccgcaggaaatgtgaaattat 13243265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 24965150 - 24965197
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||    
T  24965150 caggaaatgtgaaattattcgcagaaagaaagtaaggttttgcgataa 24965197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 36406477 - 36406419
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| || ||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  36406477 gaaattatctgcaagaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 36406419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 28928187 - 28928238
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaacctttt 100  Q
    |||||||||| ||| |||||||||||||||||||| ||| ||||||| ||||    
T  28928187 gaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacttttt 28928238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 34282861 - 34282802
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaac 95  Q
    ||||| |||| | |||||||| | |||||||||||||||||||||||| ||| |||||||    
T  34282861 ccgcatgaaatgtgaaattatttgcaggaaatgtgaaattattcgcaggaaggaagtaac 34282802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 34282898 - 34282835
Alignment:
Q  20 cataggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcag 83  Q
    ||||||||||||||| ||||| |||| | |||||||||  || |||||||||||||||| ||||    
T  34282898 cataggattttaggatccgcaggaaatgtgaaattatccgcatgaaatgtgaaattatttgcag 34282835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 146
Target Start/End: Complemental strand, 3384003 - 3383910
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||| ||||||| ||||||||||||| || ||| ||||||| |||||| ||||       ||||||  ||||||||||||||| ||| ||||    
T  3384003 ttatctgcaggaaacgtgaaattattcgtaggaaggaagtaacgttttgcgataaaatttttgctcatgttctataaaatttctggctccgcca 3383910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 52373855 - 52373940
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||| ||||| |||| | |||||||||  |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  52373855 taggattttaggatccgcatgaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 52373940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 46645731 - 46645789
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||| |||||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  46645731 gaaattatatacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 46645789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 10715784 - 10715842
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||  |||||| ||||    
T  10715784 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataa 10715842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 10929554 - 10929612
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||  |||||| ||||    
T  10929554 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataa 10929612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 40969352 - 40969410
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| ||| |||| ||||||||||||||||||| ||||||| |||||| ||||    
T  40969352 gaaattatctgcagaaaatatgaaattattcgcagaaaggaagtaacgttttgcgataa 40969410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 43003172 - 43003114
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||  ||||||| || ||||||||    
T  43003172 gaaattatctgcaggaaatgtgaaattattcgcaggaaagaagtaacgttctgcaataa 43003114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 31364254 - 31364339
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||       || ||| |||||||||||||||| ||| ||||    
T  31364254 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccatgctctataaaatttctggctccgcca 31364339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 9003670 - 9003741
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||| |||| | ||||||||| | ||||||||||||||||||||||  ||| ||||||| |||||| ||||    
T  9003670 ccgcaggaaatgtgaaattatccataggaaatgtgaaattattcgcaagaaggaagtaacattttgcgataa 9003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 4728686 - 4728744
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| ||| ||||||||||||||| |||| ||| ||||||| |||||| ||||    
T  4728686 gaaattatctgcagaaaatgtgaaattatttgcaggaaggaagtaacgttttgcgataa 4728744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 10058656 - 10058702
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  10058656 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 10058702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 50099998 - 50100056
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||  ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  50099998 gaaattatccgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 50100056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 14044463 - 14044549
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||||||||||||| ||| ||| | ||||| |||||| ||||       || |||||||||||||||||||| ||| ||||    
T  14044463 caggaaatgtgaaattattctcaggaaggaggtaacattttgcgataatttttttgcccatactctataaaatttctggctccgcca 14044549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 25237727 - 25237768
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttg 101  Q
    |||||||||||||||||||||||| ||| ||||||| |||||    
T  25237727 caggaaatgtgaaattattcgcaggaaggaagtaacgttttg 25237768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 2521875 - 2521835
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaacctttt 100  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  2521875 caggaaatgtgaaattattcgcaggaaggaagtaacgtttt 2521835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 41218370 - 41218285
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||| ||||| |||| |  ||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  41218370 taggattttaggatccgcaggaaatgtaaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41218285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 7501089 - 7501147
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  7501089 gaaattatctgcaggaaatgtgaaattattcgcaggaagtaagtaacgttttgcgataa 7501147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 43700181 - 43700128
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgc 102  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||| ||||||    
T  43700181 gaaattatctgcaggaaatgtgaaattattcgcagaaaagaagtaacgttttgc 43700128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 53987975 - 53988022
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  53987975 caggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 53988022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 33179080 - 33178983
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||| ||| |||||||||||||||||||| ||  ||||||| |||||| ||||       || || ||||||||||||| ||||||| ||||    
T  33179080 gaaattatctgcagaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgcccagactctataaaattcctgactccgcca 33178983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 26371018 - 26370972
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  26371018 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 26370972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 37516766 - 37516812
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  37516766 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 37516812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 17148895 - 17148976
Alignment:
Q  20 cataggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttg 101  Q
    ||||||||||||||| ||||| |||| | | |||||||| |||||||||||||||||||||||| ||| ||||||| |||||    
T  17148895 cataggattttaggatccgcaggaaatgtggaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttg 17148976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 29257498 - 29257552
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  29257498 ttatctgcaggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataa 29257552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 45444466 - 45444383
Alignment:
Q  20 cataggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||| | |||||||||    |  |||||||||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  45444466 cataggattttaggatctgcaagaaag----atatatctacaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcaataa 45444383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 304092 - 303982
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttc 135  Q
    ||||| |||| | |||||||||| ||||||||||||||||||||||||| |  ||||||| |||||| ||||       || || |||||||||||||||    
T  304092 ccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcagataagaagtaacgttttgcgataatttttttgcccaaactctataaaatttc 303993  T
Q  136 tgactctgcca 146  Q
    || ||| ||||    
T  303992 tggctccgcca 303982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 17249469 - 17249555
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||       || || ||||||||||||| ||||||| ||||    
T  17249469 caggaaatgtgaaattattcgcaggaagaaagtaacgttttgctataaatattttgcccagactctataaaattcctgactccgcca 17249555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 18299130 - 18299079
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaacctttt 100  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  18299130 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtttt 18299079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 22572697 - 22572651
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  22572697 aggaaatgtgaaattattcgcaggaagaaagtaacgttttgcgataa 22572651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 41010640 - 41010698
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  41010640 gaaattttctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41010698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 41114857 - 41114799
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||  ||| ||||||| |||||| ||||    
T  41114857 gaaattatctgcaggaaatgtgaaattattcgcatgaaggaagtaacgttttgcgataa 41114799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 2475945 - 2476031
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||||       || ||  |||||||||||| ||||||||||||    
T  2475945 caggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaattcctgactctgcca 2476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 6799873 - 6799821
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttg 101  Q
    |||||||||| |||||||||||||||||||||||| ||| || |||| |||||    
T  6799873 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaactaacgttttg 6799821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 25563050 - 25563107
Alignment:
Q  20 cataggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattat 77  Q
    ||||||||||||||| || || |||| | |||||||||  ||||||||||||||||||    
T  25563050 cataggattttaggatccacaggaaatgtgaaattatccccaggaaatgtgaaattat 25563107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 13203895 - 13203992
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||| | | |||||||||||||||||| | ||| ||||||| |||||| ||||       |||||| |||||||||||| ||| ||| ||||    
T  13203895 gaaattatctgcggaaaatgtgaaattattcgctggaaggaagtaacattttgcgataaattttttgctcatgctctataaaattcctggctccgcca 13203992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 15122172 - 15122268
Alignment:
Q  50 aaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||       || || ||||||||||||| ||||||| ||||    
T  15122172 aaattatctgcagaaaatgtgaaattattcgcagaaagaaagtaacgttttgcgataaattttttgcccaaactctataaaattcctgactccgcca 15122268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 9696183 - 9696271
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctg 137  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||       || || |||||||||||||||||    
T  9696183 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatttctg 9696271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 141
Target Start/End: Complemental strand, 14938910 - 14938818
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactc 141  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||| |||||| ||||       || ||  ||||||||||||||||||||    
T  14938910 gaaattatctgcaggaaatgtgaaattattcccaggaagaaagtaacattttgcgataatttttttgcccaagctctataaaatttctgactc 14938818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 2960800 - 2960897
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||  |||||||||||||||||||||||  ||| ||||||| |||||||||||       |||||  |||||||||||||||| ||| ||||    
T  2960800 gaaattatccgcaggaaatgtgaaattattcgcaagaaggaagtaacattttgcaataattttttcgctcaggctctataaaatttctggctccgcca 2960897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 34188899 - 34188959
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgca 82  Q
    ||||||||||||| ||||| |||| | |||||||||  |||||||||||||||||||||||    
T  34188899 taggattttaggatccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgca 34188959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 2836155 - 2836071
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatt 133  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| | ||| |||||       ||||| |||||||||||||    
T  2836155 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgtcttgtaataaattttttgctcagactctataaaatt 2836071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 2941350 - 2941408
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  2941350 gaaattatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 2941408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 23663747 - 23663689
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||  ||||||| |||||| ||||    
T  23663747 gaaattatctgcaggaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataa 23663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 34249001 - 34248943
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||| ||||| ||| ||||||| |||||| ||||    
T  34249001 gaaattatctgcaggaaatgtgaaattatccgcaggaaggaagtaacgttttgcgataa 34248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 1781019 - 1780934
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||       || || ||||||||||||| ||| ||||||||    
T  1781019 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaattcctggctctgcca 1780934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 10397797 - 10397739
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||   |||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  10397797 gaaattatctgttggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 10397739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 28614392 - 28614334
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||  ||| |||||||||||||||||||| ||| ||||||| |||||| ||||    
T  28614392 gaaattatcagcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 28614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 15675440 - 15675498
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  15675440 gaaattatctacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 15675498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 767398 - 767483
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||| | ||| |||| | |||||||||  ||| ||||| |||||||||||||| ||||||||||| |||||||||||    
T  767398 taggattttaggatctgcaggaaatgtgaaattatccgcagaaaatgagaaattattcgcaggaagaaagtaacgttttgcaataa 767483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 13942767 - 13942683
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||| ||||| |||| | ||| ||||| ||||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  13942767 taggattttaggatccgcaggaaatgtgaa-ttatccacaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 13942683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 15504063 - 15504134
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||| |||| | |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  15504063 ccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 15504134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 14832799 - 14832696
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgccaat 148  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||  |||||| ||||       || || ||||||||||||||||| ||| |||| |    
T  14832799 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccagactctataaaatttctggctccgccact 14832700  T
Q  149 gcta 152  Q
    ||||    
T  14832699 gcta 14832696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 35469030 - 35469088
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  35469030 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 35469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 6900881 - 6900991
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttc 135  Q
    |||||||||| | |||||||||  |||||||||||||||||||||||  ||| ||||||| |||||| ||||        |||||||||||| |||||||    
T  6900881 ccgcaagaaatgtgaaattatccgcaggaaatgtgaaattattcgcatgaaggaagtaacattttgcgataaattttttactcatactctattaaatttc 6900980  T
Q  136 tgactctgcca 146  Q
    || ||| ||||    
T  6900981 tgtctccgcca 6900991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 36234566 - 36234485
Alignment:
Q  26 attttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||| ||||| |||| | |||||||||| || ||||||||||||||||||||  ||| ||||||| |||||| ||||    
T  36234566 attttaggatccgcaggaaatgtgaaattatctgcaagaaatgtgaaattattcgcaagaaggaagtaacattttgcgataa 36234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 7162085 - 7162014
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||| |||| | ||||||||| |||||||||||||||||||| |||| ||| ||||||| |||||| ||||    
T  7162085 ccgcaggaaatgtgaaattatccacaggaaatgtgaaattatttgcaggaaggaagtaacattttgcgataa 7162014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 32953669 - 32953598
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||| |||| | |||||||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  32953669 ccgcaggaaatgtgaaattatctgcaggaaatgtgaaattattcgtaggaaggaagtaacattttgcgataa 32953598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 37552052 - 37552099
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  37552052 caggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 37552099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 37654882 - 37654929
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  37654882 caggaaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 37654929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 1672475 - 1672417
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| ||| |||||||||||||||||||| ||| ||||||| |||||| ||||    
T  1672475 gaaattatctgcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 1672417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 16567905 - 16568015
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttc 135  Q
    ||||| |||| | |||||||||  |||||||||||||||||||| ||| ||| ||||||| |||||| ||||       || ||  ||||||||||||||    
T  16567905 ccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcccaggaaggaagtaacattttgcgataatttttttgcccaagctctataaaatttc 16568004  T
Q  136 tgactctgcca 146  Q
    |||||| ||||    
T  16568005 tgactccgcca 16568015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 12267399 - 12267313
Alignment:
Q  20 cataggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||| ||||| |||| | ||| |||||  ||| |||||||||||||||| ||| ||| ||||||| |||||| ||||    
T  12267399 cataggattttaggatccgcaggaaatgtgaa-ttatccgcagaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataa 12267313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 2476496 - 2476550
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  2476496 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 2476550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 30249092 - 30249150
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| ||| ||||||||||||||| |||| ||||||| ||| |||||| ||||    
T  30249092 gaaattatctgcagaaaatgtgaaattatttgcaggaagaaagcaacgttttgcgataa 30249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 33007025 - 33007071
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  33007025 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 33007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 34444097 - 34444151
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  34444097 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 34444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 34846485 - 34846531
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  34846485 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 34846531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 9527196 - 9527281
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||||||||||||||||| |||| |||||| |||||| ||||       || |||||||||||||||||||| ||||||||    
T  9527196 aggaaatgtgaaattattcgcaggaagacagtaacgttttgcgataaattttttgcccatactctataaaatttctggctctgcca 9527281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 14727457 - 14727515
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  14727457 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 14727515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 4774086 - 4774196
Alignment:
Q  36 ccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttc 135  Q
    ||||| |||| | |||||||||  || ||||||||||||||||||||| ||||||||||| |||||| ||||       || || |||||||||||||||    
T  4774086 ccgcaggaaatgtgaaattatccgcaagaaatgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaatttc 4774185  T
Q  136 tgactctgcca 146  Q
    || ||| ||||    
T  4774186 tggctccgcca 4774196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 27460806 - 27460864
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||| |||||||||||||||||||||||| ||| ||||||  |||||| ||||    
T  27460806 gaaattatctgcaggaaatgtgaaattattcgcaggaaggaagtaatgttttgcgataa 27460864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 4642025 - 4641972
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgc 102  Q
    |||||||||  |||||||||||||||||||||||| ||| ||||||| ||||||    
T  4642025 gaaattatccgcaggaaatgtgaaattattcgcaggaaggaagtaacgttttgc 4641972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 49898492 - 49898573
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||| |||||||||||    |  |||| ||||||||||||||||||||||||| ||| | ||||| |||||| ||||    
T  49898492 taggattttaggatccgcaagaaag----atatatccacaggaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 49898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 25007595 - 25007649
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  25007595 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 25007649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 27584001 - 27583967
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcag 83  Q
    |||||||||| ||||||||||||||||||||||||    
T  27584001 gaaattatctgcaggaaatgtgaaattattcgcag 27583967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 31844617 - 31844571
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  31844617 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 31844571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 33468947 - 33468901
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  33468947 aggaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 33468901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 37153974 - 37153920
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  37153974 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 37153920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 44305543 - 44305597
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  44305543 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 44305597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 4843422 - 4843505
Alignment:
Q  24 ggattttaggacccgcaagaaaggagaaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||| ||||| |||| | |||||||||  |||||||||||||||||||||||| ||  ||||||| |||||| ||||    
T  4843422 ggattttaggatccgcaggaaatgtgaaattatccgcaggaaatgtgaaattattcgcaggaaagaagtaacgttttgcgataa 4843505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 146
Target Start/End: Original strand, 3012460 - 3012546
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    |||||||||||||||||||| ||| ||| ||||||| |||||||||||       || || ||||||||||||||||| ||| ||||    
T  3012460 caggaaatgtgaaattattcacaggaaggaagtaacgttttgcaataatttttttgcccagactctataaaatttctggctccgcca 3012546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 21932729 - 21932633
Alignment:
Q  50 aaattatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||| |||||||| ||||||||||||||| ||  ||||||| |||||| ||||       || || ||||||||||||| ||||||| ||||    
T  21932729 aaattatctgcaggaaatatgaaattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaattcctgactccgcca 21932633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 22206663 - 22206616
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  22206663 caggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 22206616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 22228076 - 22228123
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  22228076 caggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 22228123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 19377511 - 19377573
Alignment:
Q  22 taggattttaggacccgcaagaaaggagaaattatctacagg-aaatgtgaaattattcgcag 83  Q
    ||||||||||||| ||||| |||| | |||||||||  |||| ||||||||||||||||||||    
T  19377511 taggattttaggatccgcaggaaatgtgaaattatccgcaggaaaatgtgaaattattcgcag 19377573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 26722933 - 26722850
Alignment:
Q  63 gaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataannnnnnngctcatactctataaaatttctgactctgcca 146  Q
    ||||||||||||||||||||| ||| ||||||| |||||| ||||       || ||  |||||||||||| ||||||||||||    
T  26722933 gaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaagctctataaaattcctgactctgcca 26722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 28693979 - 28693933
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||||||| ||||||  |||||| ||||    
T  28693979 aggaaatgtgaaattattcgcagaaaggaagtaaagttttgcgataa 28693933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 21688276 - 21688312
Alignment:
Q  49 gaaattatctacaggaaatgtgaaattattcgcagaa 85  Q
    |||||||||| |||||||||||||||||||| |||||    
T  21688276 gaaattatctgcaggaaatgtgaaattattcacagaa 21688312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 25688188 - 25688148
Alignment:
Q  60 caggaaatgtgaaattattcgcagaaagaaagtaacctttt 100  Q
    |||||||||||||||||||| ||||||| ||||||| ||||    
T  25688188 caggaaatgtgaaattattcacagaaaggaagtaacatttt 25688148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 1827 - 1881
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  1827 ttatctgcaggaaatgtgaaattattcgcagaaaggaagtaacgttttgcgataa 1881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 4217 - 4263
Alignment:
Q  61 aggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  4217 aggaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 11655 - 11709
Alignment:
Q  53 ttatctacaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||| ||||||||||||||||||||| || ||| ||||||| |||||| ||||    
T  11655 ttatctgcaggaaatgtgaaattattcgtaggaaggaagtaacgttttgcgataa 11709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 109282 - 109234
Alignment:
Q  59 acaggaaatgtgaaattattcgcagaaagaaagtaaccttttgcaataa 107  Q
    |||||||| |||||||||||||||| ||| ||||||  |||||||||||    
T  109282 acaggaaacgtgaaattattcgcaggaaggaagtaatgttttgcaataa 109234  T

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