View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_low_74 (Length: 251)
Name: NF7636_low_74
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_low_74 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 2782522 - 2782279
Alignment:
| Q |
1 |
attgttgttggtaacagcaacacagtggttacaaagggagatagtgggtacaaacttgggtccagtgccatgccaaggtgttaaagattgacaaatatgg |
100 |
Q |
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| T |
2782522 |
attgttgttggtaacagcaacacagtggttacaaagggagatagtgggtacaaacttgggtccagtgccatgccaaggtgttaaagattgacaaatatgg |
2782423 |
T |
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| Q |
101 |
cagagaagaaacctgtgatgctttgtgactatgaagtttgcagtgtgaaccttagcatcacattcccaacaaaggcttgcctgatctgattcacagaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
2782422 |
cagagaagaaacctgtgatgctttgtgactatgaagtttgcagtgtgaaccttagcatcacattcccaacaaaggcttgcttgatctgattcacagaaca |
2782323 |
T |
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| Q |
201 |
actttgctggacttttgcacaactcacatttcttcttcttctca |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2782322 |
actttgctggacttttgcacaactcacatttcttcttcatctca |
2782279 |
T |
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