View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_low_82 (Length: 240)
Name: NF7636_low_82
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_low_82 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 25608218 - 25607976
Alignment:
| Q |
4 |
cagttataaactctattcatgcaaaccaacataaaaaa--------tagacattaaaagttcacgagaaaccagctgtgaaatatatactagaaaatatg |
95 |
Q |
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| T |
25608218 |
cagttataaactctattcatgcaaaccaacataaaaaaataaaaaatagactttaaaagttcacgagaaaccagctgtgaaatatatactagaaaatatg |
25608119 |
T |
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| Q |
96 |
tgagttatttaacttccttctagtatgaactattaatgtgagaatgatgtgaaaaagaaga-aaaacacgtgagaatgatgaaaaagttgattttggaca |
194 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
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| T |
25608118 |
tgacttatttaacttccttctagtatgaactattaatgtgagaatgatgtgaaaaagaagaaaaaaaacgtgagaatgatgaaaaagttgattttggaca |
25608019 |
T |
|
| Q |
195 |
agtttcttttatattttcaaaataaaaaatacactagtatatt |
237 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||| |
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| T |
25608018 |
agtttcttttatgttttcaaaataaaaaatacactagtatatt |
25607976 |
T |
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