View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7636_low_88 (Length: 227)
Name: NF7636_low_88
Description: NF7636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7636_low_88 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 56277264 - 56277459
Alignment:
| Q |
23 |
tgaggaggggtctctgaacagagacgtaatctctcatattctcacacgcgttccggccaagcctttgcttagcatgaaatgcatttccagagggtggaac |
122 |
Q |
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| T |
56277264 |
tgaggagggttctctcaacagagacgtcatctctcatattctcacacgcgttccggccaaacctttgcttagcatgaaatgcatttccagaggttggaac |
56277363 |
T |
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| Q |
123 |
aacatcatttcaagccgttcattcatcaaagatcaactcaaaaacactaatcttgttttaaatgcttttattgttcaagataggcacaggttctgc |
218 |
Q |
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| T |
56277364 |
cacatcatttcaagccgttcattcatcaaagatcaactcaaaaacacaaatcttgttttaaatggttttattgttcaagataggtacatgttctgc |
56277459 |
T |
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