View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7637_high_2 (Length: 276)

Name: NF7637_high_2
Description: NF7637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7637_high_2
NF7637_high_2
[»] chr7 (57 HSPs)
chr7 (18-143)||(5058530-5058656)
chr7 (17-144)||(11326386-11326514)
chr7 (16-143)||(27221417-27221545)
chr7 (17-142)||(4247356-4247482)
chr7 (15-144)||(39182258-39182387)
chr7 (16-143)||(8330047-8330175)
chr7 (17-143)||(5715290-5715416)
chr7 (17-143)||(22687666-22687793)
chr7 (17-143)||(44944847-44944978)
chr7 (19-143)||(8346535-8346660)
chr7 (16-143)||(14055250-14055378)
chr7 (16-143)||(14365278-14365406)
chr7 (17-143)||(24990073-24990200)
chr7 (16-140)||(24725482-24725607)
chr7 (16-142)||(9685247-9685374)
chr7 (15-140)||(8571241-8571367)
chr7 (211-273)||(44944717-44944779)
chr7 (15-143)||(7730345-7730473)
chr7 (16-140)||(26281315-26281439)
chr7 (16-143)||(8343802-8343930)
chr7 (16-143)||(26617474-26617606)
chr7 (211-273)||(20570757-20570819)
chr7 (214-273)||(24725344-24725403)
chr7 (26-143)||(11324988-11325105)
chr7 (17-138)||(21846433-21846554)
chr7 (211-273)||(24989645-24989707)
chr7 (211-264)||(5058724-5058777)
chr7 (221-273)||(39182361-39182413)
chr7 (214-273)||(17811546-17811605)
chr7 (211-273)||(5715480-5715542)
chr7 (214-271)||(4247554-4247611)
chr7 (212-273)||(7730231-7730292)
chr7 (212-273)||(14055453-14055514)
chr7 (212-273)||(14365481-14365542)
chr7 (56-143)||(17811386-17811474)
chr7 (21-80)||(4574475-4574534)
chr7 (37-143)||(27509945-27510052)
chr7 (57-142)||(1977692-1977778)
chr7 (211-273)||(8329916-8329978)
chr7 (211-273)||(27509284-27509346)
chr7 (214-273)||(21846319-21846378)
chr7 (227-273)||(8329851-8329897)
chr7 (93-143)||(20570887-20570937)
chr7 (211-273)||(26565420-26565482)
chr7 (16-74)||(26565700-26565758)
chr7 (224-273)||(11326491-11326540)
chr7 (17-78)||(30294175-30294236)
chr7 (16-68)||(21157852-21157904)
chr7 (215-271)||(26617351-26617407)
chr7 (225-273)||(27221623-27221671)
chr7 (212-263)||(6916975-6917026)
chr7 (225-271)||(1977758-1977804)
chr7 (211-273)||(8346403-8346465)
chr7 (211-273)||(30294441-30294503)
chr7 (216-273)||(8343674-8343731)
chr7 (212-257)||(27221511-27221556)
chr7 (114-142)||(5715486-5715514)
[»] chr6 (44 HSPs)
chr6 (16-141)||(6943464-6943590)
chr6 (17-143)||(15528112-15528239)
chr6 (16-143)||(10509025-10509153)
chr6 (16-143)||(19748332-19748460)
chr6 (17-143)||(17250057-17250184)
chr6 (15-143)||(30912414-30912543)
chr6 (16-143)||(17543742-17543870)
chr6 (20-143)||(2912250-2912373)
chr6 (16-142)||(27233280-27233407)
chr6 (17-141)||(7918385-7918510)
chr6 (15-143)||(11327573-11327702)
chr6 (15-143)||(23897809-23897938)
chr6 (17-143)||(26053298-26053425)
chr6 (17-143)||(26073351-26073478)
chr6 (16-143)||(7223518-7223639)
chr6 (213-273)||(19748530-19748590)
chr6 (214-273)||(17103393-17103452)
chr6 (214-273)||(22498312-22498371)
chr6 (211-270)||(23898006-23898065)
chr6 (211-273)||(7918222-7918284)
chr6 (211-273)||(10508889-10508951)
chr6 (211-273)||(11327434-11327496)
chr6 (211-273)||(17543602-17543664)
chr6 (211-273)||(26053168-26053230)
chr6 (211-273)||(26073221-26073283)
chr6 (25-143)||(22498887-22499006)
chr6 (211-273)||(7223710-7223772)
chr6 (16-143)||(17103201-17103322)
chr6 (16-80)||(5422814-5422878)
chr6 (221-273)||(15527982-15528034)
chr6 (16-80)||(18491103-18491167)
chr6 (215-273)||(2912133-2912191)
chr6 (223-269)||(3573776-3573822)
chr6 (211-273)||(4841701-4841763)
chr6 (19-80)||(3573998-3574059)
chr6 (16-79)||(12245108-12245171)
chr6 (16-80)||(10958253-10958317)
chr6 (221-257)||(17103297-17103333)
chr6 (16-143)||(21354747-21354867)
chr6 (213-272)||(27233172-27233231)
chr6 (215-273)||(30912278-30912336)
chr6 (221-257)||(7223614-7223650)
chr6 (24-68)||(8545043-8545087)
chr6 (221-257)||(23897913-23897949)
[»] chr5 (30 HSPs)
chr5 (17-141)||(20923718-20923843)
chr5 (17-143)||(43234868-43234995)
chr5 (16-139)||(18051536-18051660)
chr5 (16-143)||(21059158-21059285)
chr5 (25-142)||(27340189-27340307)
chr5 (15-143)||(19578940-19579069)
chr5 (16-144)||(22645720-22645849)
chr5 (18-126)||(23172451-23172560)
chr5 (18-135)||(18843716-18843834)
chr5 (35-143)||(41688667-41688775)
chr5 (211-276)||(43235063-43235128)
chr5 (214-273)||(18843913-18843972)
chr5 (214-273)||(20321141-20321200)
chr5 (214-273)||(23172300-23172359)
chr5 (211-273)||(18051405-18051467)
chr5 (211-273)||(19579138-19579200)
chr5 (211-273)||(41688538-41688600)
chr5 (215-273)||(21059029-21059087)
chr5 (21-75)||(24106645-24106699)
chr5 (211-272)||(43005732-43005793)
chr5 (211-271)||(38158138-38158198)
chr5 (230-273)||(19042300-19042343)
chr5 (17-80)||(38158320-38158383)
chr5 (215-273)||(27340059-27340117)
chr5 (19-80)||(19042455-19042516)
chr5 (19-80)||(20320926-20320987)
chr5 (215-257)||(22645710-22645752)
chr5 (114-144)||(23172326-23172356)
chr5 (114-144)||(41688564-41688594)
chr5 (211-259)||(19979801-19979848)
[»] chr8 (46 HSPs)
chr8 (16-143)||(11879599-11879727)
chr8 (16-143)||(11897015-11897143)
chr8 (19-144)||(15294672-15294798)
chr8 (19-144)||(15475041-15475167)
chr8 (16-141)||(5922048-5922174)
chr8 (21-143)||(3094255-3094378)
chr8 (17-134)||(17646993-17647111)
chr8 (16-142)||(22910205-22910332)
chr8 (17-143)||(45403029-45403156)
chr8 (13-91)||(477102-477180)
chr8 (16-143)||(31424162-31424290)
chr8 (211-274)||(23142369-23142432)
chr8 (18-143)||(29384319-29384444)
chr8 (19-143)||(19704457-19704583)
chr8 (56-143)||(6810861-6810948)
chr8 (211-271)||(17647192-17647252)
chr8 (211-273)||(15761230-15761292)
chr8 (93-143)||(23142252-23142302)
chr8 (16-144)||(27836465-27836594)
chr8 (211-273)||(6811015-6811076)
chr8 (211-273)||(29384184-29384246)
chr8 (211-276)||(11879795-11879860)
chr8 (211-276)||(11897211-11897276)
chr8 (16-142)||(7489286-7489414)
chr8 (15-74)||(24056640-24056699)
chr8 (214-276)||(5922247-5922308)
chr8 (223-273)||(7489155-7489205)
chr8 (211-273)||(45403225-45403286)
chr8 (18-62)||(9036757-9036801)
chr8 (223-271)||(22910077-22910125)
chr8 (16-64)||(23136348-23136396)
chr8 (230-273)||(15231835-15231878)
chr8 (211-273)||(8582238-8582300)
chr8 (214-276)||(15294867-15294929)
chr8 (214-276)||(15475236-15475298)
chr8 (230-276)||(24414156-24414202)
chr8 (93-143)||(32424409-32424459)
chr8 (37-144)||(15231744-15231852)
chr8 (221-257)||(15294772-15294808)
chr8 (221-257)||(15475141-15475177)
chr8 (103-142)||(9212258-9212297)
chr8 (224-271)||(32424542-32424589)
chr8 (114-144)||(7489181-7489211)
chr8 (231-273)||(17566313-17566355)
chr8 (16-120)||(15761464-15761569)
chr8 (213-258)||(27836351-27836396)
[»] chr3 (47 HSPs)
chr3 (16-143)||(28745769-28745897)
chr3 (17-143)||(20756039-20756166)
chr3 (16-143)||(29067283-29067411)
chr3 (17-142)||(30727694-30727820)
chr3 (18-143)||(3449294-3449419)
chr3 (22-143)||(17064326-17064448)
chr3 (16-143)||(8156132-8156261)
chr3 (16-143)||(24620202-24620333)
chr3 (26-141)||(21963438-21963554)
chr3 (26-141)||(21985874-21985990)
chr3 (211-270)||(25870197-25870256)
chr3 (35-143)||(22494783-22494892)
chr3 (214-276)||(28745974-28746036)
chr3 (16-84)||(15806568-15806635)
chr3 (16-84)||(27676355-27676423)
chr3 (20-143)||(39427905-39428029)
chr3 (211-273)||(3449182-3449244)
chr3 (211-273)||(17064502-17064564)
chr3 (93-143)||(42696924-42696974)
chr3 (214-271)||(20756220-20756277)
chr3 (17-141)||(22137278-22137403)
chr3 (211-273)||(6136441-6136503)
chr3 (211-273)||(13286139-13286201)
chr3 (211-273)||(42697043-42697105)
chr3 (16-128)||(25870389-25870506)
chr3 (214-271)||(39428101-39428158)
chr3 (211-273)||(24620069-24620131)
chr3 (211-273)||(27676631-27676693)
chr3 (17-143)||(24649690-24649818)
chr3 (211-273)||(10872587-10872649)
chr3 (215-273)||(22137476-22137534)
chr3 (18-84)||(28135723-28135789)
chr3 (16-143)||(22356054-22356183)
chr3 (214-271)||(29067475-29067532)
chr3 (211-271)||(9152859-9152918)
chr3 (17-77)||(13005927-13005987)
chr3 (217-257)||(39428000-39428040)
chr3 (21-65)||(42696870-42696914)
chr3 (211-273)||(8156001-8156062)
chr3 (215-273)||(21963630-21963688)
chr3 (215-273)||(21986066-21986124)
chr3 (227-273)||(28135973-28136019)
chr3 (221-273)||(17796772-17796822)
chr3 (221-273)||(19105212-19105262)
chr3 (221-257)||(8156121-8156157)
chr3 (16-80)||(17796376-17796440)
chr3 (16-80)||(19104816-19104880)
[»] chr1 (51 HSPs)
chr1 (24-143)||(16125457-16125580)
chr1 (19-143)||(19009948-19010073)
chr1 (17-143)||(13276268-13276395)
chr1 (15-140)||(25146773-25146899)
chr1 (16-143)||(9955037-9955165)
chr1 (16-142)||(21846271-21846398)
chr1 (17-143)||(23528656-23528783)
chr1 (16-144)||(41032671-41032800)
chr1 (16-143)||(9327217-9327345)
chr1 (18-143)||(17869752-17869873)
chr1 (16-140)||(18304815-18304941)
chr1 (16-142)||(9352066-9352193)
chr1 (18-139)||(42180071-42180193)
chr1 (19-143)||(12513283-12513408)
chr1 (16-144)||(13100190-13100319)
chr1 (17-140)||(9128845-9128969)
chr1 (16-143)||(17056001-17056129)
chr1 (211-271)||(13276140-13276200)
chr1 (214-270)||(16125330-16125386)
chr1 (214-273)||(23528854-23528913)
chr1 (17-80)||(30619075-30619138)
chr1 (211-273)||(18304683-18304745)
chr1 (214-273)||(21846146-21846205)
chr1 (211-273)||(17055791-17055853)
chr1 (101-143)||(32881412-32881454)
chr1 (221-271)||(41032647-41032697)
chr1 (214-270)||(13100388-13100444)
chr1 (222-270)||(32881526-32881574)
chr1 (17-111)||(14074404-14074499)
chr1 (214-276)||(19009817-19009879)
chr1 (223-272)||(18228471-18228520)
chr1 (16-80)||(34478836-34478900)
chr1 (214-273)||(9351935-9351994)
chr1 (17-80)||(12800647-12800710)
chr1 (231-273)||(14074355-14074397)
chr1 (211-273)||(17869622-17869684)
chr1 (211-256)||(12513473-12513518)
chr1 (16-80)||(18337588-18337651)
chr1 (213-273)||(47786055-47786115)
chr1 (222-257)||(13100294-13100329)
chr1 (230-273)||(30619156-30619199)
chr1 (114-144)||(9327112-9327142)
chr1 (215-265)||(9954913-9954963)
chr1 (114-144)||(17869648-17869678)
chr1 (223-273)||(27917244-27917294)
chr1 (16-62)||(47785791-47785837)
chr1 (28-68)||(8772715-8772755)
chr1 (221-257)||(9327206-9327242)
chr1 (221-257)||(9955026-9955062)
chr1 (221-257)||(12513383-12513419)
chr1 (221-257)||(19009937-19009973)
[»] chr2 (36 HSPs)
chr2 (16-143)||(31237979-31238107)
chr2 (15-143)||(23863323-23863452)
chr2 (16-143)||(1404782-1404910)
chr2 (15-143)||(20063712-20063841)
chr2 (16-143)||(30432418-30432546)
chr2 (19-143)||(31578007-31578131)
chr2 (16-139)||(36429847-36429971)
chr2 (211-273)||(19262188-19262250)
chr2 (18-135)||(35565964-35566082)
chr2 (16-143)||(15588852-15588979)
chr2 (211-273)||(20063918-20063980)
chr2 (19-140)||(25539231-25539353)
chr2 (211-271)||(13502547-13502607)
chr2 (221-276)||(1404988-1405043)
chr2 (211-273)||(25539017-25539079)
chr2 (211-273)||(35565829-35565891)
chr2 (211-267)||(15588732-15588788)
chr2 (16-83)||(15266081-15266148)
chr2 (214-273)||(30433013-30433072)
chr2 (211-273)||(31237848-31237910)
chr2 (17-142)||(19491855-19491982)
chr2 (16-118)||(5395675-5395778)
chr2 (16-78)||(1690830-1690892)
chr2 (227-273)||(16766996-16767042)
chr2 (15-80)||(24473334-24473399)
chr2 (16-80)||(17995054-17995118)
chr2 (16-68)||(19245152-19245204)
chr2 (16-118)||(8428141-8428244)
chr2 (17-80)||(16766710-16766773)
chr2 (211-273)||(1690600-1690662)
chr2 (18-80)||(15516625-15516687)
chr2 (211-245)||(31023497-31023531)
chr2 (14-51)||(15627652-15627689)
chr2 (211-251)||(19492128-19492168)
chr2 (56-119)||(31023262-31023326)
chr2 (221-257)||(31237968-31238004)
[»] scaffold0417 (2 HSPs)
scaffold0417 (16-143)||(7457-7585)
scaffold0417 (211-273)||(7327-7389)
[»] chr4 (38 HSPs)
chr4 (15-143)||(5361965-5362094)
chr4 (17-141)||(8011220-8011345)
chr4 (16-143)||(8889227-8889355)
chr4 (17-143)||(9911413-9911541)
chr4 (211-276)||(9911280-9911345)
chr4 (19-143)||(5375666-5375791)
chr4 (16-143)||(36120823-36120951)
chr4 (16-142)||(13551625-13551752)
chr4 (16-143)||(13023566-13023697)
chr4 (16-143)||(10142898-10143026)
chr4 (17-143)||(9770112-9770239)
chr4 (18-143)||(17466080-17466206)
chr4 (211-273)||(36121018-36121080)
chr4 (211-271)||(8011010-8011070)
chr4 (15-143)||(37240260-37240384)
chr4 (17-118)||(4156763-4156865)
chr4 (211-273)||(6346827-6346889)
chr4 (215-273)||(17466278-17466336)
chr4 (223-273)||(24719782-24719832)
chr4 (16-80)||(7452419-7452483)
chr4 (211-271)||(10143095-10143155)
chr4 (211-273)||(5361837-5361899)
chr4 (18-80)||(7044728-7044790)
chr4 (214-272)||(9770310-9770368)
chr4 (211-273)||(23064833-23064895)
chr4 (15-118)||(18459735-18459839)
chr4 (16-143)||(23064965-23065093)
chr4 (16-80)||(24719516-24719580)
chr4 (214-273)||(5375863-5375922)
chr4 (17-68)||(9149813-9149864)
chr4 (211-273)||(7044958-7045020)
chr4 (35-80)||(46664423-46664468)
chr4 (215-265)||(4157051-4157101)
chr4 (114-144)||(8889427-8889457)
chr4 (114-144)||(9770313-9770343)
chr4 (212-257)||(9911402-9911447)
chr4 (16-80)||(6347130-6347194)
chr4 (21-73)||(7815561-7815613)
[»] scaffold0186 (2 HSPs)
scaffold0186 (16-143)||(8442-8570)
scaffold0186 (211-267)||(8636-8692)
[»] scaffold0042 (2 HSPs)
scaffold0042 (15-143)||(93708-93835)
scaffold0042 (211-273)||(93577-93639)
[»] scaffold0510 (2 HSPs)
scaffold0510 (15-144)||(101-232)
scaffold0510 (221-270)||(78-127)
[»] scaffold0016 (1 HSPs)
scaffold0016 (212-273)||(56297-56358)
[»] scaffold0603 (2 HSPs)
scaffold0603 (211-273)||(8831-8893)
scaffold0603 (16-80)||(9086-9150)
[»] scaffold0048 (3 HSPs)
scaffold0048 (216-273)||(61186-61243)
scaffold0048 (216-273)||(48534-48591)
scaffold0048 (16-80)||(48854-48918)
[»] scaffold0036 (1 HSPs)
scaffold0036 (16-118)||(37193-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (17-77)||(35128-35188)
[»] scaffold0534 (1 HSPs)
scaffold0534 (231-273)||(885-927)


Alignment Details
Target: chr7 (Bit Score: 91; Significance: 4e-44; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 5058530 - 5058656
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaa 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  117 attcatcgattttgattgcgattttac 143  Q
    || |  |||||||||||||||||||||    
T  5058630 atcctacgattttgattgcgattttac 5058656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 11326386 - 11326514
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||  |||  |||| | |||||||||||||||||||||||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  116 aattcatcgattttgattgcgattttaca 144  Q
    |||  ||||||||||||||||||||||||    
T  11326486 aatctatcgattttgattgcgattttaca 11326514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 27221417 - 27221545
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||| |||||||  |||||||| ||||||||||| |||||||||||||||||| |||||| |||  |||| | ||||||||||||||||| ||||    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  27221517 aaatccatcgattttgattgcgattttac 27221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 4247356 - 4247482
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||  | |||||||||||||||||| ||||||  ||||||||||| |||||  || ||||||  ||||||||||  |||||||||||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  116 aattcatcgattttgattgcgatttta 142  Q
    |||||||||||||||||||||||||||    
T  4247456 aattcatcgattttgattgcgatttta 4247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 144
Target Start/End: Original strand, 39182258 - 39182387
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    ||||||||| ||||||||||||||||||||||||||  || |||||||||| |||||||||||||| |||  |||| | ||||||||||  |||||||||    
T  39182258 acattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgac-ttcttcaccttcaacgactgaaatccatagtagaatcccaaaataggc 39182356  T
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    ||||| ||||||||||| |||||||||||||    
T  39182357 aaaatccatcgattttggttgcgattttaca 39182387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 8330175 - 8330047
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||||| ||   |||| | ||||||||||  |||||||| |    
T  8330175 cattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaa 8330076  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||| |||||| |||||||||||||    
T  8330075 aaattcattgattttaattgcgattttac 8330047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 5715290 - 5715416
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaa-tcgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||  || |||| || |||||||||   |||||| ||||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||||||||||||||||||| ||||||||    
T  5715389 aattcatcgattttgattgtgattttac 5715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 22687793 - 22687666
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||  ||  |||| | | | ||||||  |||||||||||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| ||||||||||||||||||||||||    
T  22687693 aatccatcgattttgattgcgattttac 22687666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 44944978 - 44944847
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttct----tcaccttcaatgacctaaat-cgtagtagaatcttaaaatag 111  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    |||||||||| ||   |||| | |||||||||| ||||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  112 gcaaaattcatcgattttgattgcgattttac 143  Q
     |||||| ||||||||||||||| ||||||||    
T  44944878 tcaaaatccatcgattttgattgggattttac 44944847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 8346660 - 8346535
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaa 117  Q
    |||||||||||||||||| |||||  ||||||| || ||||||||||||||||||||||||| |||  |||| | ||||||||||  |||||||| ||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  118 ttcatcgattttgattgcgattttac 143  Q
    | |||||||||| |||||||||||||    
T  8346560 tccatcgattttaattgcgattttac 8346535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 14055250 - 14055378
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||| |||||||  ||||| |||||||||| ||  ||||||||||||||||||||||||| |||  |||||  |||||||||  |||||||||||    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||| ||||||||||||||||||||    
T  14055350 aaatccatagattttgattgcgattttac 14055378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 14365278 - 14365406
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||| |||||||  ||||| |||||||||| ||  ||||||||||||||||||||||||| |||  |||||  |||||||||  |||||||||||    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||| ||||||||||||||||||||    
T  14365378 aaatccatagattttgattgcgattttac 14365406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 24990200 - 24990073
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaa 115  Q
    |||||||||||||| | ||||||||||| |||||| || |||||| ||||||||| |||| ||| |||  |||||  |||||||||| ||||||||||||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| |||||||||||||||| |||||||    
T  24990100 aatccatcgattttgattgcaattttac 24990073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 24725607 - 24725482
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||||||||||| ||  ||||| |||||||||||||||||||  ||  |||| | ||||||||||  ||||||||||    
T  24725607 cattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggca 24725508  T
Q  115 aaattcatcgattttgattgcgattt 140  Q
    |||| |||| ||||||||| ||||||    
T  24725507 aaatccatcaattttgattacgattt 24725482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 9685374 - 9685247
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||  |||||| ||||||||||| || ||||||||||||| ||||||||||| |||  |||| | || |||||| | ||||||| ||    
T  9685374 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 9685275  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| |||||||||| ||||||||||||    
T  9685274 aaatccatcgattttaattgcgatttta 9685247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 8571241 - 8571367
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||| ||| ||||||||| |||||||||| |||||| ||| |||||||||||||||||||||| || |||  |||| | |||||||||| ||||||||      
T  8571241 acatagttctcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagag 8571340  T
Q  114 aaaattcatcgattttgattgcgattt 140  Q
    ||||  |||||||||||||||||||||    
T  8571341 aaaaaccatcgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 44944779 - 44944717
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44944779 tttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 44944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 7730473 - 7730345
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||| ||  ||  |||| |  ||||||||   ||||||||     
T  7730473 acattgttgtcaaaatcctgacttaaatcctaaaatccag-gttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaatagga 7730375  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| ||||||||||||||| ||||||||    
T  7730374 aaaatccatcgattttgattgagattttac 7730345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 26281439 - 26281315
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| |||  |||| | | |||||||   |||||| |||    
T  26281439 cattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagca 26281340  T
Q  115 aaattcatcgattttgattgcgattt 140  Q
    |||| ||||||||||| |||||||||    
T  26281339 aaatccatcgattttg-ttgcgattt 26281315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 8343930 - 8343802
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    |||||||||||||||| || | ||||||||||||| | | ||||||||||||||||||||||||| |||  |||| | ||||||||||  |||||| | |    
T  8343930 cattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaa 8343831  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| |||| ||||| |||||||||||||    
T  8343830 aaatccatcaattttaattgcgattttac 8343802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 26617606 - 26617474
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat---cgtagtagaatcttaaa--ata 110  Q
    ||||||| | ||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||| |||||     |||||||||  ||||  |||    
T  26617606 cattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatata 26617507  T
Q  111 ggcaaaattcatcgattttgattgcgattttac 143  Q
    ||||||||  |||||||||||||||||||||||    
T  26617506 ggcaaaatctatcgattttgattgcgattttac 26617474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 20570819 - 20570757
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  20570819 tttggtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagt 20570757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 24725403 - 24725344
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24725403 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 24725344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 143
Target Start/End: Original strand, 11324988 - 11325105
Alignment:
Q  26 aaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatcg 124  Q
    ||||||| ||||||||||||||||||||  |||||| || ||||||||||||||| |||  |||| | || ||||||  |||||||||||||||||||      
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcat-a 11325086  T
Q  125 attttgattgcgattttac 143  Q
    ||||||||||||| |||||    
T  11325087 attttgattgcgaatttac 11325105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 21846554 - 21846433
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||| ||||| |||  | || | |||||||||  ||||| ||| ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  116 aattcatcgattttgattgcgat 138  Q
    |||  ||||||||||||||||||    
T  21846455 aatcaatcgattttgattgcgat 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 24989707 - 24989645
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  24989707 tttggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagt 24989645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 5058724 - 5058777
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattc 264  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  5058724 tttggtaaagtccatcgattttgattgcgattttacaattttttatatcgattc 5058777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 39182361 - 39182413
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39182361 tccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagt 39182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 17811546 - 17811605
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  17811546 ggtaaaatccatcgattttgattgcgattttacaattttctatatcgattctacaaaagt 17811605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 5715480 - 5715542
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | |||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  5715480 tttggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagt 5715542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 4247554 - 4247611
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||| |||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  4247554 ggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaa 4247611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 7730292 - 7730231
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||    
T  7730292 ttggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagt 7730231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14055453 - 14055514
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||| ||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  14055453 ttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagt 14055514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14365481 - 14365542
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||| ||||| |||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  14365481 ttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagt 14365542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 17811386 - 17811474
Alignment:
Q  56 attttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    |||||| |||||| ||||||||||| |||  |||||  ||||||||| ||||||||| ||||||  |||||||||||||||||||||||    
T  17811386 attttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttac 17811474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 4574475 - 4574534
Alignment:
Q  21 ttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||  ||||||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaa 4574534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 143
Target Start/End: Complemental strand, 27510052 - 27509945
Alignment:
Q  37 ttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaattcatcgattttgattgc 135  Q
    |||||| |||||||  || ||||||||| ||||||||| | ||| ||   |||||  ||||||||| | ||||||||||||||||||| |||||||||||    
T  27510052 ttaaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgc 27509953  T
Q  136 gattttac 143  Q
    ||||||||    
T  27509952 gattttac 27509945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 1977692 - 1977778
Alignment:
Q  57 ttttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaattcatcgattttgattgcgatttta 142  Q
    |||||||| ||| | ||||||||| |||  |||||  |||||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgatttta 1977778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 8329978 - 8329916
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||| |||||||||| | ||||||| |||||||||||| |||||||||||||    
T  8329978 tttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagt 8329916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 27509346 - 27509284
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| || ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||    
T  27509346 tttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagt 27509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 21846378 - 21846319
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||| |||||||||  |||||||| ||||||||||||||||||| ||||||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagt 21846319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 8329897 - 8329851
Alignment:
Q  227 gattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||    
T  8329897 gattttgattgcgattttacgatttcttatatcaattctacaaaagt 8329851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 20570937 - 20570887
Alignment:
Q  93 tagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    ||||||||||| ||||||| |||||| |||||||||||||||| |||||||    
T  20570937 tagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttac 20570887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 26565482 - 26565420
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||| ||||||||| | ||||||| |||| |||||| ||||||||||||||    
T  26565482 tttggtaaaatccatcaattttgattgcaattttacgattttttatattgattctacaaaagt 26565420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 26565758 - 26565700
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcac 74  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||  ||||| |||||    
T  26565758 cattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcac 26565700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 11326491 - 11326540
Alignment:
Q  224 atcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||||| ||||||||||||||| ||||| ||||| ||||||||    
T  11326491 atcgattttgattgcgattttacaatttcctatattgattccacaaaagt 11326540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30294175 - 30294236
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttc 78  Q
    ||||||||||||||||  |||||||||||||||| ||| |||||| || ||| |||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcaccttc 30294236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 21157904 - 21157852
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgacttt 68  Q
    |||||||||| |||| |||||||||||| ||||||||||  ||||||||||||    
T  21157904 cattgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgacttt 21157852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 26617407 - 26617351
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||| || ||||||||||||| |||||||||||||| |||||||  ||||||||||    
T  26617407 gtaaaatcaatcgattttgattgcgattttacaattttttatatcctttctacaaaa 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 27221623 - 27221671
Alignment:
Q  225 tcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||| ||| ||||||||||||||| || |||||||||||||||||    
T  27221623 tcgattttaattgcgattttacaatttcctacatcgattctacaaaagt 27221671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 6916975 - 6917026
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttatatcgatt 263  Q
    |||||||| | |||||||||||||| | |||||| |||||||||||||||||    
T  6916975 ttggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt 6917026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 1977758 - 1977804
Alignment:
Q  225 tcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  1977758 tcgattttgattgcgattttaggatttcttatatcgattctaaaaaa 1977804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 8346465 - 8346403
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||| |||| |||||  |||||||  |||||||||||| |||||||||||||    
T  8346465 tttggtaaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagt 8346403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 30294441 - 30294503
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||| |||||||  |||||||  ||||||| ||||||||||| ||||||    
T  30294441 tttggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagt 30294503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 8343731 - 8343674
Alignment:
Q  216 taaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||| ||||| || ||||||| ||||||||| |||| ||||||| |||||||||||||    
T  8343731 taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagt 8343674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 27221511 - 27221556
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttata 257  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  27221511 ttggcaaaatccatcgattttgattgcgattttacgatttcttata 27221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 142
Target Start/End: Original strand, 5715486 - 5715514
Alignment:
Q  114 aaaattcatcgattttgattgcgatttta 142  Q
    |||||||||||||||||||||||||||||    
T  5715486 aaaattcatcgattttgattgcgatttta 5715514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 6943590 - 6943464
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||  |||||| ||||||||||| ||||||| ||    
T  6943590 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagaca 6943491  T
Q  115 aaattcatcgattttgattgcgatttt 141  Q
    |||||||||||||||||||||||||||    
T  6943490 aaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 15528239 - 15528112
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaa-tcgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||| |||| || ||||||||||||||||||| |||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| ||||||||| ||||||||||||||    
T  15528139 aatccatcgatttcgattgcgattttac 15528112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 10509153 - 10509025
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggca 114  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||| | || |  ||||||||||  ||||||||||    
T  10509153 cattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggca 10509054  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    ||||||||||||||||||| |||||||||    
T  10509053 aaattcatcgattttgattacgattttac 10509025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 19748332 - 19748460
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||| ||||||||| |||||||||| || ||| ||| |||||| || |||||||||||| ||||||  ||||| |||||||||||||||||||||||    
T  19748332 cattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggca 19748431  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||| ||||||||    
T  19748432 aaattcatcgattttgattgtgattttac 19748460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 17250057 - 17250184
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| ||| ||||| | || |||||||  |||||||||||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||||||| ||||||||||||||||||||    
T  17250157 aattcattgattttgattgcgattttac 17250184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 30912543 - 30912414
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    ||||||||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||| |||  |||| | || |||||||  |||||||||    
T  30912543 acattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggc 30912444  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| ||| ||||||||||||||||||||    
T  30912443 aaaatccatagattttgattgcgattttac 30912414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 17543870 - 17543742
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||| ||||| |||  |||| | |||||||||||||||||| |||    
T  17543870 cattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagca 17543771  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    ||||  || ||||||||||||||||||||    
T  17543770 aaatctatggattttgattgcgattttac 17543742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 2912373 - 2912250
Alignment:
Q  20 gttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcgtagtagaatcttaaaataggcaaaatt 119  Q
    ||||||||||||| |||||||||| ||||||| || ||||||| ||||||| || |||||| ||   ||||| |||||||||||||||||| ||||||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaatcatagtagaatcttaaaataagcaaaatt 2912274  T
Q  120 catcgattttgattgcgattttac 143  Q
    |||||||||||||||| |||||||    
T  2912273 catcgattttgattgcaattttac 2912250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 27233407 - 27233280
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||| | | ||||||||||||||||| ||| |||||| |||||||||||||||||| ||| ||||| | ||||||||||  ||||||| ||    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| |||||||||||||||||||||||    
T  27233307 aaatccatcgattttgattgcgatttta 27233280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 7918510 - 7918385
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||| ||| ||||| | ||||| |||| ||| ||| ||||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  116 aattcatcgattttgattgcgatttt 141  Q
    |||  |||||||||||||| ||||||    
T  7918410 aatcaatcgattttgattgggatttt 7918385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 11327702 - 11327573
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggc 113  Q
    |||||||||||||||||| |||||||| |||||||| ||   |||||||  |||||||| |||||| ||| ||||||  ||||||||||  |||||||||    
T  11327702 acattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggc 11327603  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||| |||||||||||||    
T  11327602 aaaattcatcgattttaattgcgattttac 11327573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 23897809 - 23897938
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||  || |||| ||||||||||||||||| ||| ||||||||||||||||||| ||||| |||  |||| | ||||| |||  ||||||||||    
T  23897809 acattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggc 23897908  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
     |||| ||||||||||||||||||||||||    
T  23897909 gaaatccatcgattttgattgcgattttac 23897938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 26053425 - 26053298
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| |||||||||| ||||||  || ||||||||||||||||||||||||||||| | || || || |||||||  |||||| ||||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| |||| ||||||||||  |||||||    
T  26053325 aatccatcaattttgattgtcattttac 26053298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 26073478 - 26073351
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| |||||||||| ||||||  || ||||||||||||||||||||||||||||| | || || || |||||||  |||||| ||||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| |||| ||||||||||  |||||||    
T  26073378 aatccatcaattttgattgtcattttac 26073351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 7223518 - 7223639
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||       | ||||| | |||||||||   |||||| |||    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  7223611 aaatccatcgattttgattgcgattttac 7223639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 19748530 - 19748590
Alignment:
Q  213 tggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  19748530 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 19748590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 17103393 - 17103452
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  17103393 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 17103452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 22498371 - 22498312
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 22498312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 23898006 - 23898065
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  23898006 tttggtaaaatccatcgattttgattgagattttacaatttcttatatcgattctacaaa 23898065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 7918284 - 7918222
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  7918284 tttggtaaaatccatcgattttgattgcgattttacaatttcctatattgattctacaaaagt 7918222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 10508951 - 10508889
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  10508951 tttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagt 10508889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 11327496 - 11327434
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  11327496 tttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagt 11327434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 17543664 - 17543602
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  17543664 tttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 17543602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 26053230 - 26053168
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  26053230 tttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 26053168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 26073283 - 26073221
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  26073283 tttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagt 26073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 22499006 - 22498887
Alignment:
Q  25 caaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatc 123  Q
    ||||||||  ||| |||||||||| | || ||||||||||||||||||||||| || |||  |||| | ||||| ||||| ||||||| |||||| ||||    
T  22499006 caaaatcccaactaaaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatc 22498907  T
Q  124 gattttgattgcgattttac 143  Q
    |||||| ||||| |||||||    
T  22498906 gattttaattgcaattttac 22498887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 7223710 - 7223772
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  7223710 tttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagt 7223772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 17103201 - 17103322
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| |||||||||| |||||||||| |||||||||       ||| ||||| |||  |||| | ||||||||||  ||||||| ||    
T  17103201 cattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcga-------cactttcaacgactcaaatgcatagtagaatcccaaaatagaca 17103293  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| |||||||||||||| |||||||||    
T  17103294 aaatccatcgattttgattacgattttac 17103322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5422878 - 5422814
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||||| ||||||||| ||||||||||  ||||||| ||||| |||||||||||    
T  5422878 cattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaa 5422814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 273
Target Start/End: Complemental strand, 15528034 - 15527982
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||    
T  15528034 tccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagt 15527982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18491167 - 18491103
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||  |||| |||||||||||    
T  18491167 cattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaa 18491103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 2912191 - 2912133
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| ||| |||||||||||| |||||||||||||||||||| | |||||||||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagt 2912133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 3573822 - 3573776
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaa 269  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||    
T  3573822 catcgattttgattgcgattttacaatttcttatatctattctacaa 3573776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 4841763 - 4841701
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | |||||||||||||| ||||||||| |||||||||  |||||||||||||||    
T  4841763 tttggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagt 4841701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 3574059 - 3573998
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||| ||||||| | ||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaa 3573998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 12245108 - 12245171
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttca 79  Q
    ||||||||| |||||| ||| ||||||| |||||||||| ||||||||||||| ||||| ||||    
T  12245108 cattgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttca 12245171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 10958317 - 10958253
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||||||||||||   ||||||||||    
T  10958317 cattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaa 10958253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 17103297 - 17103333
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17103297 tccatcgattttgattacgattttacgatttcttata 17103333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 21354747 - 21354867
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    |||||||||||||||||  |||||||||||||||| | |        ||||||||| |||||||| ||| ||||||  | ||||||||  ||||||| ||    
T  21354747 cattgttgtcaaaatcccaacttaaatcctaaaatcctg--------gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagaca 21354838  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||| |||| |||||||||||||    
T  21354839 aaatccatcgttttttattgcgattttac 21354867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 27233231 - 27233172
Alignment:
Q  213 tggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaag 272  Q
    ||||||| || ||||||||||||| ||||||||||||||  |||| ||||||||| ||||    
T  27233231 tggtaaaatctatcgattttgattgcgattttacaattttctatagcgattctactaaag 27233172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 30912336 - 30912278
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||||||| ||||| ||||| ||  |||||||||||||||| |||||||||    
T  30912336 gtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagt 30912278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 7223614 - 7223650
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  7223614 tccatcgattttgattgcgattttacgatttcttata 7223650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 8545087 - 8545043
Alignment:
Q  24 tcaaaatcctgacttaaatcctaaaattcagaattttgcgacttt 68  Q
    ||||||||| || ||||||||||||||| || |||||||||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgacttt 8545043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 23897913 - 23897949
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  23897913 tccatcgattttgattgcgattttacgatttcttata 23897949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  116 aattcatcgattttgattgcgatttt 141  Q
    | | ||||||||||||||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 43234868 - 43234995
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| | |||||||||| ||||||||| ||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| ||||||||||||||| ||||||||    
T  43234968 aatccatcgattttgattgtgattttac 43234995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 18051660 - 18051536
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| |||||||||||||||||  || |||||||||||||||||| |||||| |||  |||||  |||||||||  |||||||||||    
T  18051660 cattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggca 18051561  T
Q  115 aaattcatcgattttgattgcgatt 139  Q
    |||| ||||||||||||||||||||    
T  18051560 aaatccatcgattttgattgcgatt 18051536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 21059285 - 21059158
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||| || ||||||||||||||  || ||||||||||||||||||| ||||| |||  |||||   ||||||||   ||||||||||    
T  21059285 cattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccatgtagaatccctaaataggcaa 21059186  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||||||||||||||||||||||||||||    
T  21059185 aattcatcgattttgattgcgattttac 21059158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 27340307 - 27340189
Alignment:
Q  25 caaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaattcatc 123  Q
    |||||||| |||||||||| ||||||| |  |||||||||||||||||| |||||| |||  |||||  |||||||||||||||||||||||||||||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  124 gattttgattgcgatttta 142  Q
    ||||||||||| |||||||    
T  27340207 gattttgattgagatttta 27340189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 19578940 - 19579069
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||| |  ||||||||| |||||| ||| ||||||||| ||||||||||||||| ||| ||||| | ||||||||||  |||||| ||    
T  19578940 acattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagc 19579039  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| |||||||||||||||||| |||||    
T  19579040 aaaatccatcgattttgattgcgactttac 19579069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 22645849 - 22645720
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||  ||||| | ||||| ||||  |||||| | |    
T  22645849 cattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagta 22645750  T
Q  115 aaattcatcgattttgattgcgattttaca 144  Q
    || | |||| ||||||||||||||||||||    
T  22645749 aattccatctattttgattgcgattttaca 22645720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23172560 - 23172451
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaa 116  Q
    ||||||||||||||| |||||||||||||||||| || |||||||||||||||||| |||||| ||| ||||| | ||||||||||  ||||||| ||||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  117 attcatcgat 126  Q
    ||||||||||    
T  23172460 attcatcgat 23172451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 18843716 - 18843834
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaa 116  Q
    ||||||| ||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||| |||  |||| | | ||||||||  ||||||| ||||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  117 attcatcgattttgattgc 135  Q
    |||||||||||||||||||    
T  18843816 attcatcgattttgattgc 18843834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 41688775 - 41688667
Alignment:
Q  35 acttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaattcatcgattttgatt 133  Q
    |||||||||||||||||| || |||||| | ||||||||||||||| ||| |||||   ||||| |||  ||||||| ||||||||||||||||||||||    
T  41688775 acttaaatcctaaaattcgga-ttttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgatt 41688677  T
Q  134 gcgattttac 143  Q
    ||||||||||    
T  41688676 gcgattttac 41688667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 43235063 - 43235128
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    ||||||||| || ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  43235063 tttggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttct 43235128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 18843913 - 18843972
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  18843913 ggtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagt 18843972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 20321141 - 20321200
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  20321141 ggtaaaatccatcgattttgattgcgattttacaatttcctatatagattctacaaaagt 20321200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 23172359 - 23172300
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23172359 ggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 23172300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 18051467 - 18051405
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| || ||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  18051467 tttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagt 18051405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 19579138 - 19579200
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||||||||  |||| |||||||||||||||    
T  19579138 tttggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagt 19579200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 41688600 - 41688538
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  41688600 tttggtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagt 41688538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 21059087 - 21059029
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||||||||||||| |||||||| ||||||||||||  |||||||||||||    
T  21059087 gtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagt 21059029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 24106645 - 24106699
Alignment:
Q  21 ttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcacc 75  Q
    ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcacc 24106699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 43005793 - 43005732
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaag 272  Q
    ||||||| | |||||||||||| ||| ||||||||| ||||| |||||||||||||||||||    
T  43005793 tttggtacaatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaag 43005732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 38158198 - 38158138
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||||| |||||| |||||||||  ||||||||||||||||| || ||||||||||||    
T  38158198 tttggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaa 38158138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 19042343 - 19042300
Alignment:
Q  230 tttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  19042343 tttgattgcgattttacaatttcctatatcgattctacaaaagt 19042300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 38158383 - 38158320
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||||||||||||| | |||||||||||||||||  || |||||||||||||||| || |||||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaa 38158320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 27340117 - 27340059
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| || ||||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  27340117 gtaaaatctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagt 27340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 19042516 - 19042455
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||  |||||||| |||||||| |  |||||| ||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaa 19042455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 20320926 - 20320987
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||  || |||||||||||||| |  ||||||| |||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaa 20320987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 22645752 - 22645710
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttata 257  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||    
T  22645752 gtaaattccatctattttgattgcgattttacaatttcttata 22645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 23172356 - 23172326
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  23172356 aaaattcatcgattttgattgcgattttaca 23172326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 41688594 - 41688564
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  41688594 aaaattcatcgattttgattgcgattttaca 41688564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 19979801 - 19979848
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatc 259  Q
    ||||||||| ||||||||||||||||  | |||||||||||||||||||    
T  19979801 tttggtaaaatccatcgattttgattgtg-ttttacaatttcttatatc 19979848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 11879599 - 11879727
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||  |||||  |||||||||| ||||||||| |    
T  11879599 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11879698  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||    
T  11879699 aaattcatcgattttgattgcgattttac 11879727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 11897015 - 11897143
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||  |||||  |||||||||| ||||||||| |    
T  11897015 cattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaa 11897114  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||    
T  11897115 aaattcatcgattttgattgcgattttac 11897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 15294672 - 15294798
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaa 117  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||  |||||| |||||||||   |||||||||||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  118 ttcatcgattttgattgcgattttaca 144  Q
    | |||||||||||||||||||||||||    
T  15294772 tccatcgattttgattgcgattttaca 15294798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 15475041 - 15475167
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaa 117  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| |||  |||||| |||||||||   |||||||||||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  118 ttcatcgattttgattgcgattttaca 144  Q
    | |||||||||||||||||||||||||    
T  15475141 tccatcgattttgattgcgattttaca 15475167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 5922048 - 5922174
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||||||| ||| || || | ||||||||||  ||||||| ||    
T  5922048 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagaca 5922147  T
Q  115 aaattcatcgattttgattgcgatttt 141  Q
    |||| ||||||||||||||||||||||    
T  5922148 aaatccatcgattttgattgcgatttt 5922174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 3094378 - 3094255
Alignment:
Q  21 ttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaatt 119  Q
    ||||||||||   |||||||||| |||||||||| ||||||| ||||||||||||||||| |||  |||||  |||||||||| |||||||||||||||     
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  120 catcgattttgattgcgattttac 143  Q
    ||||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttac 3094255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 17646993 - 17647111
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| ||| | || || ||||||||||  |||||||| ||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  116 aattcatcgattttgattg 134  Q
    |||||||||||||||||||    
T  17647093 aattcatcgattttgattg 17647111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 22910332 - 22910205
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    ||||| ||| || |||| |||||||||||||||||| || ||||| ||||||||||||| ||||| |||  |||||  ||||||||||||||||||||||    
T  22910332 cattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggca 22910233  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| ||| |||||||||||||||||||    
T  22910232 aaatccattgattttgattgcgatttta 22910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 45403029 - 45403156
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||  ||||||||| ||||||| ||  |||||||||||||||| |||||||| ||| ||||| | ||| ||||||| |||||| ||||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    ||| ||||||||||||||||||||||||    
T  45403129 aatccatcgattttgattgcgattttac 45403156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 477180 - 477102
Alignment:
Q  13 tcacattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc 91  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  477180 tcacattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatc 477102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 31424162 - 31424290
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||| | ||||| |||  |||| | ||| ||||||  ||||||||||    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||| ||||||||||||||||||||    
T  31424262 aaatccattgattttgattgcgattttac 31424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 23142369 - 23142432
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagtt 274  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23142369 tttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagtt 23142432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 29384444 - 29384319
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaat-tcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||| |  |||||||||||||| | ||| |||||||||||||||||||||||| |||  |||| | ||||| ||||  |||||||||||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttaga-ttttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaa 29384346  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    |||||||||| |||||||||||||||||    
T  29384345 aattcatcga-tttgattgcgattttac 29384319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 19704583 - 19704457
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattca-gaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaa 116  Q
    ||||||||||||||  ||||||||| ||||||||| |  |||||||||||||||||||||||| |||  |||||  |||||||||   | ||||||||||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  117 attcatcgattttgattgcgattttac 143  Q
    || |||||||||||||||| |||||||    
T  19704483 atccatcgattttgattgcaattttac 19704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 6810861 - 6810948
Alignment:
Q  56 attttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    ||||||||||||||||||||||||| |||  |||| | ||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaa-tcatcgattttgattacgattttac 6810948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 17647192 - 17647252
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17647192 tttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaa 17647252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 15761292 - 15761230
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  15761292 tttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagt 15761230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 23142252 - 23142302
Alignment:
Q  93 tagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23142252 tagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttac 23142302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 27836594 - 27836465
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| |  ||||| |||||||||||||| ||||||||  ||| |||||||||||  ||  |||| | |||||||||  ||||||| |||    
T  27836594 cattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagca 27836495  T
Q  115 aaattcatcgattttgattgcgattttaca 144  Q
    ||||||||| ||||||||| | ||||||||    
T  27836494 aaattcatcaattttgattacaattttaca 27836465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 6811015 - 6811076
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  6811015 tttggtaaaatccatcgattttgattgcgatttt-caatttcttatatctattctacaaaagt 6811076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 29384246 - 29384184
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||  |||||||||||||    
T  29384246 tttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagt 29384184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 11879795 - 11879860
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    ||||||||| |||||||||||||| | ||||||||||||||  ||||||||||||| |||||||||    
T  11879795 tttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttct 11879860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 11897211 - 11897276
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    ||||||||| |||||||||||||| | ||||||||||||||  ||||||||||||| |||||||||    
T  11897211 tttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttct 11897276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 7489414 - 7489286
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaat-ct---taaaata 110  Q
    |||| ||||||||||||  | ||||||| |||||| |||||||||||   ||||||||||||||| |||  ||||| |||||||||| ||   |||||||    
T  7489414 cattattgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaata 7489318  T
Q  111 ggcaaaattcatcgattttgattgcgatttta 142  Q
    | ||||||| ||||||||||||||| ||||||    
T  7489317 gacaaaatttatcgattttgattgcaatttta 7489286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 24056699 - 24056640
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcac 74  Q
    |||||||| |||||||| |||||||||||||||||| ||| ||||||||||||| |||||    
T  24056699 acattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcac 24056640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 5922247 - 5922308
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||| ||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  5922247 ggtaaaatccatcgatta-gattgcgattttacaatttcctatatcgattctacaaaagttct 5922308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 7489205 - 7489155
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  7489205 catcgattttgattgcgattttacaattttctatatcgattctacaaaagt 7489155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 45403225 - 45403286
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| || ||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  45403225 tttggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagt 45403286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgc 62  Q
    |||||||||||| |||||||||||||||||||||||| |||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 22910125 - 22910077
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  22910125 catcgactttgattgcgattttacgatttcttatatcgattctacaaaa 22910077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 23136348 - 23136396
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcga 64  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  23136348 cattattgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 15231835 - 15231878
Alignment:
Q  230 tttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||| |||||||||||||| |||||||||||||||||||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagt 15231878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 8582238 - 8582300
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | ||||||||||||||   ||||||| |||||||||||| |||||||||||||    
T  8582238 tttggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagt 8582300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 15294867 - 15294929
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||| ||||| ||||||| || ||||||||  ||||||||||| |||||||||||||||||    
T  15294867 ggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttct 15294929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 15475236 - 15475298
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||| ||||| ||||||| || ||||||||  ||||||||||| |||||||||||||||||    
T  15475236 ggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttct 15475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 24414202 - 24414156
Alignment:
Q  230 tttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||||| |||||||||||||| |||||||||||||||||| ||||    
T  24414202 tttgattaggattttacaatttcctatatcgattctacaaaaattct 24414156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 32424409 - 32424459
Alignment:
Q  93 tagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||||||||    
T  32424409 tagtagaatcctaaaatagacaaaatttatagattttgattgcgattttac 32424459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 15231744 - 15231852
Alignment:
Q  37 ttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaa-tcgtagtagaatcttaaaataggcaaaattcatcgattttgattgc 135  Q
    |||||||||||| || |  |||||||||  |||||||||||||| |||  ||| || || || |||||||||||||||||||| || |   |||||||||    
T  15231744 ttaaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgc 15231843  T
Q  136 gattttaca 144  Q
    |||||||||    
T  15231844 gattttaca 15231852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 15294772 - 15294808
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15294772 tccatcgattttgattgcgattttacaatttcttata 15294808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 15475141 - 15475177
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15475141 tccatcgattttgattgcgattttacaatttcttata 15475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 9212297 - 9212258
Alignment:
Q  103 ttaaaataggcaaaattcatcgattttgattgcgatttta 142  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  9212297 ttaaaataggaaaaatccatcgattttgattgcgatttta 9212258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 32424542 - 32424589
Alignment:
Q  224 atcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||||| ||| ||||||||||||||| ||| ||||||||||||||    
T  32424542 atcgatttttattgcgattttacaatttcctatctcgattctacaaaa 32424589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 7489211 - 7489181
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  7489211 aaaattcatcgattttgattgcgattttaca 7489181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 17566313 - 17566355
Alignment:
Q  231 ttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||||||||||||||||  ||||||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagt 17566355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 15761569 - 15761464
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||  ||||||||||||||| | ||| |||||| || ||| || |||||||| ||| | || || ||| | ||||  ||||||||||    
T  15761569 cattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggca 15761470  T
Q  115 aaattc 120  Q
    ||||||    
T  15761469 aaattc 15761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 27836396 - 27836351
Alignment:
Q  213 tggtaaagtccatcgattttgattacgattttacaatttcttatat 258  Q
    ||||||| ||||||||||||||||  |||||||||||||| |||||    
T  27836396 tggtaaaatccatcgattttgattgtgattttacaatttcctatat 27836351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 28745769 - 28745897
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| || ||||||||||||||| || ||||||||||||||||||||||||| ||| | || || ||||||||||| ||||||| ||    
T  28745769 cattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagaca 28745868  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||    
T  28745869 aaattcatcgattttgattgcgattttac 28745897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 20756039 - 20756166
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| |||||||||  |||||||||| ||||||||| |||||||||||||||||||  |||| | |||||||||||||||||||||||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    |||  ||||||||||||||| |||||||    
T  20756139 aatcaatcgattttgattgcaattttac 20756166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 29067283 - 29067411
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| |||  |||| | ||||||||||  ||||||| ||    
T  29067283 cattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaca 29067382  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||| ||||||||    
T  29067383 aaatccatcgattttgattgtgattttac 29067411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 142
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggcaa 115  Q
    |||||| |||||||||||||||||||| |||||| | ||||||| ||||||||||||||||||| |||  |||||  ||||||||||  ||||||| |||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  116 aattcatcgattttgattgcgatttta 142  Q
    |||||||||||||||||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 3449419 - 3449294
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggcaaa 116  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| | |  |||||  |||||||||| |||||||||||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  117 attcatcgattttgattgcgattttac 143  Q
    || ||| |||||| |||||||||||||    
T  3449320 atccatagatttttattgcgattttac 3449294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 17064326 - 17064448
Alignment:
Q  22 tgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggcaaaattc 120  Q
    ||||||||||| |||||||||| |||||||||| ||||||||| | | ||||||||||| ||| | || || |||||||||  |||||||| ||||||||    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  121 atcgattttgattgcgattttac 143  Q
    ||||||||| |||||||||||||    
T  17064426 atcgatttttattgcgattttac 17064448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 8156261 - 8156132
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaa-taggc 113  Q
    |||||||||||||||||  |||||||| ||||||||||||||||| ||| ||| |||||||||||||||  |||| | ||||| ||||  |||| ||| |    
T  8156261 cattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagac 8156162  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| ||||||||||||||||||||||||    
T  8156161 aaaatccatcgattttgattgcgattttac 8156132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 24620333 - 24620202
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgac---tttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaatag 111  Q
    ||||||||||||||| | |||||||||||||||||| |  ||||||||||   ||||||||||||||| |||  |||| |  |||||||||| |||||||    
T  24620333 cattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatag 24620234  T
Q  112 gcaaaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||| ||||| |||||||    
T  24620233 gcaaaattcatcgattttaattgcaattttac 24620202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 21963438 - 21963554
Alignment:
Q  26 aaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatcg 124  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||| || |||  |||| | ||||| |||| ||||||| ||||||| |||||    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  125 attttgattgcgatttt 141  Q
    |||||||| ||||||||    
T  21963538 attttgatagcgatttt 21963554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 21985874 - 21985990
Alignment:
Q  26 aaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatcg 124  Q
    ||||||| ||||||||||||||||||||  ||||| |||||||||||||||| || |||  |||| | ||||| |||| ||||||| ||||||| |||||    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  125 attttgattgcgatttt 141  Q
    |||||||| ||||||||    
T  21985974 attttgatagcgatttt 21985990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 25870256 - 25870197
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25870256 tttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 25870197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 22494892 - 22494783
Alignment:
Q  35 acttaaatcctaaaattcaga-attttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaattcatcgattttgat 132  Q
    |||||||||||||||| | || ||||||||||||| ||||||||||| |||  |||| | |||||||||| |||||||  ||||||||||||||||||||    
T  22494892 acttaaatcctaaaat-ctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgat 22494794  T
Q  133 tgcgattttac 143  Q
    |||||||||||    
T  22494793 tgcgattttac 22494783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 28745974 - 28746036
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  28745974 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttct 28746036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15806635 - 15806568
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac 84  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgac 15806568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 27676355 - 27676423
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac 84  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||||||| |||||    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgac 27676423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 39427905 - 39428029
Alignment:
Q  20 gttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaaat 118  Q
    ||||||||||||| || ||||||  |||||| | | ||||||| ||||||||||| ||||| |||  |||||| ||||||||||  ||||||| |||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  119 tcatcgattttgattgcgattttac 143  Q
     ||||||||||||||||||||||||    
T  39428005 ccatcgattttgattgcgattttac 39428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 3449244 - 3449182
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  3449244 tttggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagt 3449182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 17064502 - 17064564
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  17064502 tttggtaaaatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagt 17064564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 42696924 - 42696974
Alignment:
Q  93 tagtagaatcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42696924 tagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttac 42696974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 20756220 - 20756277
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  20756220 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaa 20756277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 22137278 - 22137403
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||| | ||||||||||||||||||||||||||||  || || |||||||||||||||| || | |  |||| | ||||| ||||  |||||| ||||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  116 aattcatcgattttgattgcgatttt 141  Q
    ||| |||||||||| |||||||||||    
T  22137378 aatccatcgattttaattgcgatttt 22137403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 6136503 - 6136441
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  6136503 tttggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagt 6136441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 13286139 - 13286201
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||| |||  |||||||| ||||||||||||||||||||||||||    
T  13286139 tttggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagt 13286201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 42697043 - 42697105
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||| ||||  ||||||||||||||||||||||||||    
T  42697043 tttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagt 42697105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 25870506 - 25870389
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatga-----cctaaatcgtagtagaatcttaaaata 110  Q
    ||||||||||||||||  ||||||||||||||||| ||  |||||| ||||||||||| |||||| ||      | || ||||||||||| || ||||||    
T  25870506 cattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaata 25870407  T
Q  111 ggcaaaattcatcgattt 128  Q
    |||||||| |||||||||    
T  25870406 ggcaaaatccatcgattt 25870389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 39428101 - 39428158
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||    
T  39428101 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaa 39428158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 24620131 - 24620069
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||| | ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  24620131 tttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagt 24620069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 27676631 - 27676693
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||| ||||||||||  |||||||| |||||||||||||||| |||||||||    
T  27676631 tttggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagt 27676693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 24649818 - 24649690
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaat-aggca 114  Q
    |||||||||||||||| |||||||||| ||||||  || |||||  ||||| |||||||||||| |||  |||| | |||||||||   ||||| | |||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaagca 24649719  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    ||||||||| ||||||| || ||||||||    
T  24649718 aaattcatcaattttgactgtgattttac 24649690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 10872649 - 10872587
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||| ||||| |||  |||||||| |||||||||||||||||| |||||||    
T  10872649 tttggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagt 10872587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 22137476 - 22137534
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||| |||||||||  | |||||| ||||||||||||||||||||||||||    
T  22137476 gtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagt 22137534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 28135723 - 28135789
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac 84  Q
    ||||||||||||| | || ||||||| |||||||||| ||||||||||||| ||||| |||| ||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgac 28135789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 22356183 - 22356054
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttctt-caccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    ||||||| ||||||| | ||||||||||||||||||||| |||||  || ||| || || ||||||  |  | ||| | |||||||||| ||||||| ||    
T  22356183 cattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagc 22356084  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| |||  |||||||||||||||||||    
T  22356083 aaaatccatgaattttgattgcgattttac 22356054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 29067475 - 29067532
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||| |||||||||||||||| ||||||||||| |||  ||||| |||||||||||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaa 29067532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 9152918 - 9152859
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||||| || |||||||||||||  |||||||||||||| || |||||||||||||||    
T  9152918 tttggtaaaatctatcgattttgattgtgattttacaatttcata-atcgattctacaaaa 9152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 13005927 - 13005987
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcacctt 77  Q
    |||||||||||||||  |||||||||   |||||||| |||||||||||||| ||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctt 13005987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 39428000 - 39428040
Alignment:
Q  217 aaagtccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||||||| ||||||||| ||||||||||    
T  39428000 aaagtccatcgattttgattgcgattttacgatttcttata 39428040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  21 ttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgac 65  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 8156062 - 8156001
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||| |||| |||||| |||||||||| ||||||||||| || ||||||||||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagt 8156001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 21963630 - 21963688
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||| |||||||||  | |||||| ||||||||||||||||||| ||||||    
T  21963630 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagt 21963688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 21986066 - 21986124
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||| |||||||||  | |||||| ||||||||||||||||||| ||||||    
T  21986066 gtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagt 21986124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 28135973 - 28136019
Alignment:
Q  227 gattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||| | |||||||||||||||||||| ||| |||||||||    
T  28135973 gattttgattcctattttacaatttcttatatcaattttacaaaagt 28136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 17796772 - 17796822
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||| ||||||||| |||||||||  |||||||||||||||    
T  17796772 tccatcaattttgatttcgattttacgatttcttat--cgattctacaaaagt 17796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 19105212 - 19105262
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||| ||||||||| |||||||||  |||||||||||||||    
T  19105212 tccatcaattttgatttcgattttacgatttcttat--cgattctacaaaagt 19105262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 8156157 - 8156121
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  8156157 tccatcgattttgattgcgattttacgatttcttata 8156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 17796376 - 17796440
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||| | |||||||||| ||||||  || ||||| ||||||| |||| ||||||    
T  17796376 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaa 17796440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 19104816 - 19104880
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||| | |||||||||| ||||||  || ||||| ||||||| |||| ||||||    
T  19104816 cattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaa 19104880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 16125580 - 16125457
Alignment:
Q  24 tcaaaatcctgacttaaatcctaaaattcagaattttgcgactttc---ttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaatt 119  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||| ||||||||| | ||||| ||||||||||||||||||||     
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  120 catcgattttgattgcgattttac 143  Q
    ||| ||||||||||||||||||||    
T  16125480 cattgattttgattgcgattttac 16125457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 19010073 - 19009948
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaa 117  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| | ||||| |||  ||||||| ||||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  118 ttcatcgattttgattgcgattttac 143  Q
    | ||||||||||||||||||||||||    
T  19009973 tccatcgattttgattgcgattttac 19009948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 13276395 - 13276268
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| || ||||||||||||||  || |||||||||||||||||| |||||| ||||||||| | |||||||||| ||||||||||||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    |||  |||||||||||||||||||||||    
T  13276295 aatcaatcgattttgattgcgattttac 13276268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 25146899 - 25146773
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | || || ||||||||||  ||||||| |    
T  25146899 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagac 25146800  T
Q  114 aaaattcatcgattttgattgcgattt 140  Q
    ||| | |||| ||||| ||||||||||    
T  25146799 aaagtacatcaattttaattgcgattt 25146773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 9955165 - 9955037
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcgta-gtagaatcttaaaataggca 114  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||  | ||||||||  |||||| |||    
T  9955165 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagca 9955066  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  9955065 aaatccatcgattttgattgcgattttac 9955037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 21846398 - 21846271
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||||||||| ||||||||||| |||  |||| | ||||||||||| |||||||  |    
T  21846398 cattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaa 21846299  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| |||||||||||||||||||||||    
T  21846298 aaatccatcgattttgattgcgatttta 21846271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 23528656 - 23528783
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||| |||||| |||  |||| | |||||||||| ||||||||||||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    |||  ||||||||||| |||||||||||    
T  23528756 aatctatcgattttgaatgcgattttac 23528783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 41032800 - 41032671
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||  |||||||||| || ||||||| ||||||||| ||||||||||||||| |||  |||| | |||||||||  |||||||||||    
T  41032800 cattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggca 41032701  T
Q  115 aaattcatcgattttgattgcgattttaca 144  Q
    |||| |||||||||| ||||||||||||||    
T  41032700 aaatccatcgattttaattgcgattttaca 41032671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 9327345 - 9327217
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||| |||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| |||  |||||  ||||| ||||  ||||||| ||    
T  9327345 cattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagaca 9327246  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  9327245 aaatccatcgattttgattgcgattttac 9327217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 17869873 - 17869752
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcgt-agtagaatcttaaaataggcaaa 116  Q
    |||||||||||||||||||||||||| ||||     | ||||||||||||||||||||||| | ||||||||||   ||||||||| |||||||||||||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  117 attcatcgattttgattgcgattttac 143  Q
    |||| |||||||||||||| |||||||    
T  17869778 attcttcgattttgattgcaattttac 17869752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 18304941 - 18304815
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttc-aatgac-ctaaatcgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||| || ||| | || || ||||||||||| ||||||| |    
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  114 aaaattcatcgattttgattgcgattt 140  Q
    ||||| |||| ||||||||||||||||    
T  18304841 aaaatccatcaattttgattgcgattt 18304815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 9352193 - 9352066
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||| |||  |||||  ||| ||| ||  ||||||| ||    
T  9352193 cattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagaca 9352094  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| | |||||||||||||||||||||    
T  9352093 aaatccgtcgattttgattgcgatttta 9352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 42180193 - 42180071
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaa 116  Q
    |||||||||||||||  |||||||| ||||||||||| ||||||||||||||||| ||||||| ||   |||| | ||||||||| | ||||||||||||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  117 attcatcgattttgattgcgatt 139  Q
    || ||||||||||||||| ||||    
T  42180093 atacatcgattttgattgtgatt 42180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 12513283 - 12513408
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaa 117  Q
    |||||||||||||| ||||||||||||| |||  || |||||||||||||||||| |||||| |||  |||| | ||||| |||| |||||||  |||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  118 ttcatcgattttgattgcgattttac 143  Q
    | ||||||||||||||||||||||||    
T  12513383 tccatcgattttgattgcgattttac 12513408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 13100190 - 13100319
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    |||| ||||||||||||  |||||||| |||||||  || ||||| ||||||||||||| ||||| |||  |||||  |||||||||| |||||||||||    
T  13100190 cattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggca 13100289  T
Q  115 aaattcatcgattttgattgcgattttaca 144  Q
    |||  |||||||||||||||||||||||||    
T  13100290 aaaaccatcgattttgattgcgattttaca 13100319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 140
Target Start/End: Complemental strand, 9128969 - 9128845
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaa 115  Q
    |||||||| ||||||  |||||||||||||||| | || || |||||||||||||||| || || |||  ||||   ||||||||||||||||||| |||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  116 aattcatcgattttgattgcgattt 140  Q
    |||||||||||||||||||||||||    
T  9128869 aattcatcgattttgattgcgattt 9128845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 17056129 - 17056001
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    |||||| ||||||||||||| |||||||||||||| ||| ||||||| | ||||| ||||||||| |||  | || | ||||||||| |||||||| | |    
T  17056129 cattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagta 17056030  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  17056029 aaatccatcgattttgattgcgattttac 17056001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 13276200 - 13276140
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  13276200 tttggtatagtccatcgattttgattgcaattttacaatttcttatatcgattctacaaaa 13276140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 16125386 - 16125330
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16125386 ggtaacgtccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 16125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 23528854 - 23528913
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23528854 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 23528913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30619075 - 30619138
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaa 30619138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 18304745 - 18304683
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  18304745 tttgataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 18304683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 21846205 - 21846146
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  21846205 ggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagt 21846146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 17055853 - 17055791
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||| ||||||||||||||||||    
T  17055853 tttggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagt 17055791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 143
Target Start/End: Original strand, 32881412 - 32881454
Alignment:
Q  101 tcttaaaataggcaaaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32881412 tcttaaaataggcaaaattcatcgattttgattgcgattttac 32881454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 41032697 - 41032647
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  41032697 tccatcgattttaattgcgattttacaatttcttatatcgattctacaaaa 41032647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 13100388 - 13100444
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    |||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  13100388 ggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaa 13100444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 32881526 - 32881574
Alignment:
Q  222 ccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32881526 ccattgattttgattgcgattttacaatttcttatatcgattctacaaa 32881574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaatag 111  Q
    |||||||||||||||| | |||||||||||||||  || ||||||||||||||||||  ||||| |||  |||| |  ||||||||||||||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 19009879 - 19009817
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||| ||||  |||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  19009879 ggtaaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttct 19009817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 18228471 - 18228520
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaaaag 272  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  18228471 catcgatgttgattgcgattttacgatttcttatatcgattctacaaaag 18228520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 34478900 - 34478836
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||| ||||||| |||||||||| |||||||  | |||||| ||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaa 34478836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 9351994 - 9351935
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| | ||||||||||||||  |||||||||||||| ||||| ||||||||||||||    
T  9351994 ggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagt 9351935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 12800710 - 12800647
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||||||| |||||||  ||||||||||||||||| || ||||| ||||||||||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaa 12800647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 273
Target Start/End: Complemental strand, 14074397 - 14074355
Alignment:
Q  231 ttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagt 14074355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 17869684 - 17869622
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | |||||||||||||| |||||||||||||| ||| || ||||||| ||||||    
T  17869684 tttggtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagt 17869622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 256
Target Start/End: Original strand, 12513473 - 12513518
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttat 256  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||    
T  12513473 tttggtaaaatctatcgattttgattgcgattttacaatttcttat 12513518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 18337651 - 18337588
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||||| |||||| | |||||||| ||| ||||||| ||||| |||||||||||    
T  18337651 cattgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaa 18337588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 47786055 - 47786115
Alignment:
Q  213 tggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||| |||||||||||| ||| |||||||   |||||||||||| |||||||||||||    
T  47786055 tggtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagt 47786115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 13100294 - 13100329
Alignment:
Q  222 ccatcgattttgattacgattttacaatttcttata 257  Q
    ||||||||||||||| ||||||||||||||||||||    
T  13100294 ccatcgattttgattgcgattttacaatttcttata 13100329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 30619156 - 30619199
Alignment:
Q  230 tttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||| |||||||||||||| | |||||||||||||||||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagt 30619199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 9327142 - 9327112
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  9327142 aaaattcatcgattttgattgcgattttaca 9327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 9954963 - 9954913
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattct 265  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| ||||||    
T  9954963 gtaaaatccatcgatcttgattgcgattttacaatttcctatatggattct 9954913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 17869678 - 17869648
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  17869678 aaaattcatcgattttgattgcgattttaca 17869648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 27917294 - 27917244
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||||||| ||||  |||||||||||||||| ||| |||||||||    
T  27917294 catcgattttgattgcgataatacaatttcttatatcaattatacaaaagt 27917244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 47785791 - 47785837
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgc 62  Q
    |||||||||||||||||  || ||||||||||||||||| |||||||    
T  47785791 cattgttgtcaaaatcccaacataaatcctaaaattcaggattttgc 47785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 8772715 - 8772755
Alignment:
Q  28 aatcctgacttaaatcctaaaattcagaattttgcgacttt 68  Q
    ||||| ||||||||||| ||||| |||||||||||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgacttt 8772755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 9327242 - 9327206
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  9327242 tccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 9955062 - 9955026
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  9955062 tccatcgattttgattgcgattttacgatttcttata 9955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 12513383 - 12513419
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  12513383 tccatcgattttgattgcgattttacgatttcttata 12513419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 19009973 - 19009937
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  19009973 tccatcgattttgattgcgattttacgatttcttata 19009937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 31238107 - 31237979
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| |||||||||||||||||  || ||||||| ||||||||||||||||| ||| | || || |||||||||||||||||||| |    
T  31238107 cattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaa 31238008  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  31238007 aaatccatcgattttgattgcgattttac 31237979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 23863452 - 23863323
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||| ||||||||| |||||||  |||||||||||||||||||||| ||||| |||  |||| | ||||||||||| |||||||||    
T  23863452 acattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggc 23863353  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||| ||||||||||| ||||||||||||    
T  23863352 aaaatccatcgattttggttgcgattttac 23863323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 1404782 - 1404910
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||| ||||||||| |||||||| || |||||| |||||||||||||||||| ||| ||||| | | |||||||| |||| || |||    
T  1404782 cattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgca 1404881  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||| ||||||||    
T  1404882 aaatccatcgattttgattgtgattttac 1404910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 20063712 - 20063841
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggc 113  Q
    |||||||||||||||||| |||||||| |||||||| ||   |||||||  |||||||| |||||| ||| ||||||  ||||||||||  |||||||||    
T  20063712 acattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggc 20063811  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||| |||||||||||||    
T  20063812 aaaattcatcgattttaattgcgattttac 20063841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 30432418 - 30432546
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    |||||||||||||||||||| |||||| |||||||  || ||||| ||||||||||| ||||||| |||  |||| | ||||||||||| ||||||| ||    
T  30432418 cattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagaca 30432517  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| |||||||||||||||| |||||||    
T  30432518 aaatccatcgattttgattgcaattttac 30432546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 31578007 - 31578131
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcgtagtagaatcttaaaataggcaaaat 118  Q
    |||||||||||||| |||||||||  ||||||| |  ||||||||| ||||||||||||||| ||  |||||| |||||||||| ||||||| |||||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcctagtagaatcctaaaataagcaaaat 31578106  T
Q  119 tcatcgattttgattgcgattttac 143  Q
     |||| ||||||||||| |||||||    
T  31578107 ccatcaattttgattgcaattttac 31578131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 36429847 - 36429971
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgac-ctaaatcgtagtagaatcttaaaataggca 114  Q
    |||||||||||||||||  |||||||||||| |||  || ||||||||||||||||||||||||| ||| | |  || ||| ||||||| ||||||||||    
T  36429847 cattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggca 36429946  T
Q  115 aaattcatcgattttgattgcgatt 139  Q
    |||| ||||||||||||||||||||    
T  36429947 aaatccatcgattttgattgcgatt 36429971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 19262250 - 19262188
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19262250 tttggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 19262188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 35566082 - 35565964
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaa 116  Q
    |||||||||||||||  |||||||||  ||||||||| ||||||||||||||||||  |||||||||  |||| | | ||||||||  ||||||||||||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  117 attcatcgattttgattgc 135  Q
    || ||||||||||||||||    
T  35565982 atccatcgattttgattgc 35565964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 15588979 - 15588852
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||| ||||||||||| ||||||| || |||||||||| |||||||| ||||||||||||||||  ||  |||| | ||||||||||| ||||||| ||    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    ||||  |||| |||| |||||||||||||    
T  15588880 aaatcaatcgttttttattgcgattttac 15588852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 20063918 - 20063980
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  20063918 tttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagt 20063980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 25539353 - 25539231
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaa 117  Q
    |||||| ||||||| || |||||||||||||||||  | ||||| | ||||||||||||||| ||| ||||| | ||| ||||||  |||||| ||||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  118 ttcatcgattttgattgcgattt 140  Q
    | |||||||||||| ||||||||    
T  25539253 tccatcgattttgactgcgattt 25539231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 13502607 - 13502547
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  13502607 tttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaa 13502547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 1404988 - 1405043
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  1404988 tccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttct 1405043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 25539079 - 25539017
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| || ||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  25539079 tttggtaaaatctatcgattttgattgcaattttacaattttttatatcgattctacaaaagt 25539017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 35565891 - 35565829
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||||||||||||||  |||||||  ||||||||||||||||||||||||||    
T  35565891 tttggtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagt 35565829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 15588788 - 15588732
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctac 267  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  15588788 tttggtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac 15588732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 15266081 - 15266148
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatga 83  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||  ||||| |||| |||||||||    
T  15266081 cattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatga 15266148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 30433013 - 30433072
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| |||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagt 30433072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 31237910 - 31237848
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| | ||||||||||||  |||||||||| |||||||||    
T  31237910 tttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagt 31237848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatccta--aaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggc 113  Q
    |||||||||||||||  || ||||||||||  ||||  || |||||||||||||||||| ||| || |||  |||||  ||| ||||||  ||||||||     
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaatcc-aaaataggt 19491953  T
Q  114 aaaattcatcgattttgattgcgatttta 142  Q
    ||||| |||||||||||||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 5395778 - 5395675
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    |||||||||||||||  |||| |||||| ||||||  || ||||||||||||| |||| ||| ||||||  |||| | ||| ||||||| ||||||||||    
T  5395778 cattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaataggca 5395679  T
Q  115 aaat 118  Q
    ||||    
T  5395678 aaat 5395675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 1690892 - 1690830
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttc 78  Q
    ||||||||||||||  | |||||||||| ||||||| || |||||| ||||||||||||||||    
T  1690892 cattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttc 1690830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 16766996 - 16767042
Alignment:
Q  227 gattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  16766996 gattttgattgcgattttacgatttcttatatcgattctataaaagt 16767042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 24473334 - 24473399
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||| ||||| |||||||| ||| ||||||||| ||||||||| |||  ||||||||||    
T  24473334 acattgttgtcgaaatcgtgacttaagtcccaaaattcaggattttgcgattttactcaccttcaa 24473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 17995054 - 17995118
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||| ||||| | |||||||| |||||||| ||||||||||||| ||| |||||| ||||    
T  17995054 cattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaa 17995118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 19245152 - 19245204
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgacttt 68  Q
    ||||||||||||||||| |||||||||  |||||||||| ||||| |||||||    
T  19245152 cattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgacttt 19245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 8428141 - 8428244
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| | || || |||| ||||||| | |||||||||| |||  | ||||| ||||||  |||| | ||| ||||||||||||||||||    
T  8428141 cattgttgtcaaaattcagaattcaatcttaaaatttaaaattttgcgattttacttacctttaatgactcaaattcataggagaatcttaaaataggca 8428240  T
Q  115 aaat 118  Q
    ||||    
T  8428241 aaat 8428244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 16766710 - 16766773
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||  ||||||||||| ||||||| || ||||| ||| ||| |||||||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaa 16766773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 1690662 - 1690600
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |  ||||||||||||| ||||||||| | ||||||||||||||  ||||||||    
T  1690662 tttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagt 1690600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 15516687 - 15516625
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||| ||||||   ||||||||| ||| |||||| ||||||||||||| |||||||||||    
T  15516687 ttgttgttaaaatcgcaacttaaatcttaatattcagcattttgcgactttattcaccttcaa 15516625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 31023497 - 31023531
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgatttta 245  Q
    ||||||||| |||||||||||||||||||||||||    
T  31023497 tttggtaaaatccatcgattttgattacgatttta 31023531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 15627652 - 15627689
Alignment:
Q  14 cacattgttgtcaaaatcctgacttaaatcctaaaatt 51  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  15627652 cacattattgtcaaaatcccgacttaaatcctaaaatt 15627689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 19492128 - 19492168
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaattt 251  Q
    ||||||||| ||||||||||||||||||| |||||| ||||    
T  19492128 tttggtaaaatccatcgattttgattacggttttacgattt 19492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 119
Target Start/End: Original strand, 31023262 - 31023326
Alignment:
Q  56 attttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaatt 119  Q
    ||||||||||||| ||||| ||||| |||  |||| | |||||||||| ||||||||||||||||    
T  31023262 attttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaatt 31023326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 31238004 - 31237968
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttata 257  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  31238004 tccatcgattttgattgcgattttacgatttcttata 31237968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 7585 - 7457
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    ||||||||| | ||||| ||||||||| ||||||||||| |||||||||||||||| |||||||| || | |||||  |||||||||| |||||||||||    
T  7585 cattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggca 7486  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    ||||||||||||||| |||||||||||||    
T  7485 aaattcatcgattttaattgcgattttac 7457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 7389 - 7327
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| | |||||||||||||| ||||| ||||||||| |||||| |||| ||||||||    
T  7389 tttggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagt 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 5362094 - 5361965
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||  |||| | |||||||||   |||||||||    
T  5362094 acattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggc 5361995  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    ||||  ||||||||||||||| ||||||||    
T  5361994 aaaacccatcgattttgattgagattttac 5361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 8011345 - 8011220
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaa 115  Q
    ||||||||||||||||  ||| |||||||||||||||| ||||||||||||||||||||||||| |||  |||| | ||||||||||  |||||  ||||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  116 aattcatcgattttgattgcgatttt 141  Q
    ||||||||||||||||||||||||||    
T  8011245 aattcatcgattttgattgcgatttt 8011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 8889227 - 8889355
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||| ||||||||||| ||||||||||||||||| ||| |||||| || |||||||||| |||| |||  |||| | || |||||||  ||||||||||    
T  8889227 cattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggca 8889326  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||    
T  8889327 aaattcatcgattttgattgcgattttac 8889355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 9911541 - 9911413
Alignment:
Q  17 attgttgtcaaaatcctgacttaaa-tcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggca 114  Q
    ||||||||| |||||| || ||||| ||||||||||||  ||||||| ||||||||||||||||| | ||||||||  |||||||||| |||||| ||||    
T  9911541 attgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggca 9911442  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||||||||||||    
T  9911441 aaatccatcgattttgattgcgattttac 9911413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 9911345 - 9911280
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagttct 276  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9911345 tttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgattctacaaaagttct 9911280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 5375666 - 5375791
Alignment:
Q  19 tgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggcaaaa 117  Q
    ||||||||||||||  || ||||| |||||||| |  ||||||||||||||||||||||||| |||  |||| | || |||||| ||||||||| |||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  118 ttcatcgattttgattgcgattttac 143  Q
    |||||||| |||||||||||||||||    
T  5375766 ttcatcgactttgattgcgattttac 5375791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 36120823 - 36120951
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| | || ||||||  ||||||| || ||||||||| ||||||||||||||| ||| ||||| | || || |||  ||||||| |||    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||||||||||||||||||||||||||||    
T  36120923 aaattcatcgattttgattgcgattttac 36120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 13551752 - 13551625
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||||  |||||| ||||||||||| || ||||||||||||| ||||||||||| |||  |||| | || |||||| | ||||||| ||    
T  13551752 cattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagaca 13551653  T
Q  115 aaattcatcgattttgattgcgatttta 142  Q
    |||| |||||||||| ||||||||||||    
T  13551652 aaatccatcgattttaattgcgatttta 13551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 13023566 - 13023697
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaa-ttcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaat--cttaaaatag 111  Q
    |||||||||||||||||  ||||||||||||||| || || |||||||||||||||||||||||||||||  |||| | |||||||||  |  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  112 gcaaaattcatcgattttgattgcgattttac 143  Q
      |||||  |||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttac 13023697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 10142898 - 10143026
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||| ||||||| ||||||||| |||||||| |  ||||||||||||||| |||||||||||||  || | | ||||| |||   ||||||| ||    
T  10142898 cattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagaca 10142997  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||||||||||||||| ||||||||    
T  10142998 aaatccatcgattttgattgtgattttac 10143026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 9770112 - 9770239
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaa 115  Q
    |||||||| ||||||  ||||||||| |||||||  || |||||| |||||| ||||||||||| |||  |||||  |||||||||| |||||||| |||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  116 aattcatcgattttgattgcgattttac 143  Q
    |||  ||| |||||||||||||||||||    
T  9770212 aatctatcaattttgattgcgattttac 9770239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 17466080 - 17466206
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggcaaa 116  Q
    ||||||||||||| |  ||||||||| ||||||| || ||||||||| |||||||| ||| || |||  |||||  || ||||||| ||||||| |||||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  117 attcatcgattttgattgcgattttac 143  Q
    || ||||||||| ||||||||||||||    
T  17466180 atccatcgatttagattgcgattttac 17466206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 36121018 - 36121080
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  36121018 tttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagt 36121080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 8011070 - 8011010
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  8011070 tttggtaaaatacatcgattttgattgcgattttacaatttcttatatcgattctataaaa 8011010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 37240260 - 37240384
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatcg-tagtagaatcttaaaataggc 113  Q
    |||||||||| |||||||  ||||||||||||||||| ||    || ||||||| ||||||||||| |||  |||||  |||||||| |  |||||||||    
T  37240260 acattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaaccc-aaaataggc 37240354  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
    | ||||||||||||||||||||||||||||    
T  37240355 ataattcatcgattttgattgcgattttac 37240384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 4156763 - 4156865
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggcaa 115  Q
    |||||||||||||||| |||||||||| ||||||| || |||||  |||||| |||||||| || |||  ||||| ||||||||||| ||||||| ||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaa 4156862  T
Q  116 aat 118  Q
    |||    
T  4156863 aat 4156865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 6346889 - 6346827
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| || |||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  6346889 tttggtgaaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagt 6346827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 17466278 - 17466336
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagt 17466336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 24719782 - 24719832
Alignment:
Q  223 catcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  24719782 catcgattttgattgcgattttacgatttcttatatcgattctacaaaagt 24719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 7452419 - 7452483
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||| |||||||||||    
T  7452419 cattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaa 7452483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 10143095 - 10143155
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaa 271  Q
    |||| |||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||    
T  10143095 tttgataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaa 10143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 5361899 - 5361837
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| || |||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  5361899 tttggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagt 5361837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 7044728 - 7044790
Alignment:
Q  18 ttgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||||| ||||| |||||||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaa 7044790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 9770310 - 9770368
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaag 272  Q
    |||||| | |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  9770310 ggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaag 9770368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 23064895 - 23064833
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||  |||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  23064895 tttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagt 23064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 18459839 - 18459735
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||| ||||||| |||| |||||||||||| ||  ||||||||||| | ||||| ||||| |||  |||| | ||| |||||| ||||||||||    
T  18459839 acattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggc 18459740  T
Q  114 aaaat 118  Q
    |||||    
T  18459739 aaaat 18459735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 23065093 - 23064965
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||| |||| || ||||||||| ||||||| ||| ||||||  ||||||||||| ||||| |||  |||| | | |||||||  |||||||||      
T  23065093 cattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtc 23064994  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| |||||||||| ||||| |||||||    
T  23064993 aaatccatcgattttaattgcaattttac 23064965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 24719516 - 24719580
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||||||||||  ||||||| | ||||||||||  ||||||||||||| |||||||||||    
T  24719516 cattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaa 24719580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 5375863 - 5375922
Alignment:
Q  214 ggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||||||||||  |||||||||||||| ||||| ||||||||| ||||    
T  5375863 ggtaaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagt 5375922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 9149864 - 9149813
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgacttt 68  Q
    ||||| |||||||||| |||||||||||||||||| || |||||||||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgacttt 9149813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 7044958 - 7045020
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| ||||||||||||||||   ||||||| |||||||||||||||| | |||||||    
T  7044958 tttggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagt 7045020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 46664468 - 46664423
Alignment:
Q  35 acttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||| |||||||||||||||||||||||| |||| ||||||    
T  46664468 acttaaatcttaaaattcagaattttgcgactttgttcatcttcaa 46664423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 4157051 - 4157101
Alignment:
Q  215 gtaaagtccatcgattttgattacgattttacaatttcttatatcgattct 265  Q
    ||||| |||||||||||||||| ||||||||| ||||||| ||| ||||||    
T  4157051 gtaaaatccatcgattttgattgcgattttacgatttcttgtattgattct 4157101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 8889427 - 8889457
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  8889427 aaaattcatcgattttgattgcgattttaca 8889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 144
Target Start/End: Original strand, 9770313 - 9770343
Alignment:
Q  114 aaaattcatcgattttgattgcgattttaca 144  Q
    |||||||||||||||||||||||||||||||    
T  9770313 aaaattcatcgattttgattgcgattttaca 9770343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 9911447 - 9911402
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttata 257  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  9911447 ttggcaaaatccatcgattttgattgcgattttacgatttcttata 9911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 6347194 - 6347130
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||| |||||||||| |  |||||||||||||||| ||| ||||||| ||||| || ||||||||    
T  6347194 cattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaa 6347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 7815561 - 7815613
Alignment:
Q  21 ttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttca 73  Q
    |||| ||||||| ||||||||||||||||| ||| |||||| |||||| ||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattca 7815613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 8442 - 8570
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaatc-gtagtagaatcttaaaataggca 114  Q
    |||||||||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||||| ||| ||||||  | ||||||||  |||||| |||    
T  8442 cattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagca 8541  T
Q  115 aaattcatcgattttgattgcgattttac 143  Q
    |||| ||| ||||||||||||||||||||    
T  8542 aaatccattgattttgattgcgattttac 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 8636 - 8692
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctac 267  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  8636 tttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctac 8692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 143
Target Start/End: Complemental strand, 93835 - 93708
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||| ||||  ||  |||| | ||| |||||  ||||||||||    
T  93835 acattgttgtcaaaatcccgacttaaatcctaaaatccagaatttt--gattttcttcaccctcaacaactcaaatccatagaagaattctaaaataggc 93738  T
Q  114 aaaattcatcgattttgattgcgattttac 143  Q
     |||| ||||||||||||||||||||||||    
T  93737 gaaatccatcgattttgattgcgattttac 93708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 93639 - 93577
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  93639 tttggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagt 93577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 232 - 101
Alignment:
Q  15 acattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggc 113  Q
    |||||||||  || |||| ||||||||||||||||| ||| ||||||||||||||||||| ||||| |||  |||| | ||||| |||  ||||||||||    
T  232 acattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggc 133  T
Q  114 -aaaattcatcgattttgattgcgattttaca 144  Q
     ||||| ||||||||||||||| |||||||||    
T  132 gaaaatccatcgattttgattgagattttaca 101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 127 - 78
Alignment:
Q  221 tccatcgattttgattacgattttacaatttcttatatcgattctacaaa 270  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  127 tccatcgattttgattgagattttacaatttcttatatcgattctacaaa 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 56358 - 56297
Alignment:
Q  212 ttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  56358 ttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagt 56297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 8893 - 8831
Alignment:
Q  211 tttggtaaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  8893 tttggtaaaatccatcgattttgattgcgattttacaagttcttatatctattctacaaaagt 8831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 9150 - 9086
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    |||||||||||||||||||| ||||||  ||||||  || |||||| || ||| |||||||||||    
T  9150 cattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaa 9086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 61243 - 61186
Alignment:
Q  216 taaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagt 61186  T

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Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 48591 - 48534
Alignment:
Q  216 taaagtccatcgattttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    ||||||||||||||||||||  ||||||||| | ||||| ||||||||||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagt 48534  T

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Target: scaffold0048; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 48918 - 48854
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaa 80  Q
    ||||||||| ||||| | |||||||||||||||||  |||||||||| ||||| |||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaa 48854  T

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Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 37296 - 37193
Alignment:
Q  16 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaatgacctaaat-cgtagtagaatcttaaaataggca 114  Q
    ||||||||||||||| | |||||||||  |||||||||||||||||| | ||| |||||||||||  ||  |||| | ||| |||||||||||||||| |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  115 aaat 118  Q
    ||||    
T  37196 aaat 37193  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 35188 - 35128
Alignment:
Q  17 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcacctt 77  Q
    |||||||||||||||  ||||||||| |||||||||| |||||||  ||||| ||||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctt 35128  T

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Target: scaffold0534 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 885 - 927
Alignment:
Q  231 ttgattacgattttacaatttcttatatcgattctacaaaagt 273  Q
    |||||| ||||||||||||||||||||||  ||||||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagt 927  T

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