View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7638_low_37 (Length: 253)
Name: NF7638_low_37
Description: NF7638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7638_low_37 |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 812367 - 812601
Alignment:
| Q |
15 |
atgaatataaaatgaaatgaaatattagtttatatcacaaactaagagaatccgcaatgaatttggagttggtgcattaacttgtgtggcacatttacta |
114 |
Q |
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|||||||||||||||||||||||| | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
812367 |
atgaatataaaatgaaatgaaatagt--tttatttcacaaactaagagaatccacaatgaatttggagttggtgcattaacttgtgtggcacatttactt |
812464 |
T |
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| Q |
115 |
ctctcaactgtccgatttggtttaacggctgagatcatacagcttcactaaaactgatgtgtaatcttaacagtctaatctcaaattatcgattaaagtt |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
812465 |
ctctcaactgtccgatttggtttaacggctgagatcatacagcttcactaaaattgatgtgtaatcttaacagtctaatctcaaattatcgattaaaatt |
812564 |
T |
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| Q |
215 |
aattacaatgtaaagtagtttggaactctacatcaca |
251 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
812565 |
aattacaatgtaaagtagtttggaactctacatcaca |
812601 |
T |
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