View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7639_high_14 (Length: 239)
Name: NF7639_high_14
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7639_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7198407 - 7198622
Alignment:
| Q |
1 |
ttgtaatgataaatttcttgacttagaattagagtttatctgaagtggtgtataaaattgttttacaaattggacttaaacaaatggttcaacttgttaa |
100 |
Q |
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| T |
7198407 |
ttgtaatgataaatttcttgacttagaattagagtttatctgaagtggtatataaaattgttttacaaattggacttaaacaaatggttcaacttgttaa |
7198506 |
T |
|
| Q |
101 |
atcgagaatcggtaagtttgccaaatgattgtactgcgatctgatcaaccagttcttatgttttccatctcaactaaaatgtattttcttttaattatat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7198507 |
atcgagaatcggtaagtttgccaaatgattgtactgcgatctgatcaaccagttcttatgttttccatctcaactaaaatgtattttcttttaattatat |
7198606 |
T |
|
| Q |
201 |
gatctatggtccatgg |
216 |
Q |
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|||| ||||||||||| |
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| T |
7198607 |
gatcgatggtccatgg |
7198622 |
T |
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