View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7639_high_15 (Length: 225)

Name: NF7639_high_15
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7639_high_15
NF7639_high_15
[»] chr7 (36 HSPs)
chr7 (17-211)||(1268906-1269099)
chr7 (122-210)||(15716222-15716310)
chr7 (121-211)||(11750420-11750510)
chr7 (122-211)||(24952928-24953017)
chr7 (121-200)||(46575102-46575181)
chr7 (121-211)||(29606269-29606359)
chr7 (121-211)||(38665458-38665548)
chr7 (123-211)||(30076956-30077044)
chr7 (121-211)||(47642814-47642904)
chr7 (121-211)||(7574552-7574642)
chr7 (121-203)||(23406653-23406735)
chr7 (121-211)||(26605057-26605147)
chr7 (121-211)||(28264751-28264841)
chr7 (121-200)||(15954587-15954666)
chr7 (129-211)||(23110439-23110521)
chr7 (121-203)||(32529181-32529263)
chr7 (121-203)||(35291327-35291409)
chr7 (121-211)||(38666185-38666275)
chr7 (123-203)||(41968435-41968515)
chr7 (121-211)||(3214836-3214931)
chr7 (122-197)||(39558905-39558980)
chr7 (121-211)||(24812397-24812483)
chr7 (121-203)||(6791445-6791527)
chr7 (121-205)||(5582862-5582946)
chr7 (121-203)||(35358026-35358108)
chr7 (125-203)||(37504564-37504642)
chr7 (121-203)||(41046839-41046921)
chr7 (125-211)||(45232053-45232138)
chr7 (170-211)||(3602583-3602624)
chr7 (121-202)||(30891581-30891662)
chr7 (122-205)||(17306603-17306686)
chr7 (121-171)||(21919689-21919740)
chr7 (121-170)||(5215380-5215430)
chr7 (121-179)||(23585625-23585683)
chr7 (121-155)||(36533327-36533361)
chr7 (121-198)||(42584089-42584167)
[»] scaffold1319 (1 HSPs)
scaffold1319 (112-211)||(35-134)
[»] chr8 (36 HSPs)
chr8 (121-211)||(40579011-40579101)
chr8 (120-211)||(6982785-6982876)
chr8 (122-211)||(118125-118214)
chr8 (121-211)||(41720564-41720654)
chr8 (121-211)||(7128091-7128181)
chr8 (121-211)||(40267798-40267887)
chr8 (126-211)||(37675943-37676028)
chr8 (121-211)||(27847784-27847874)
chr8 (121-211)||(29454144-29454234)
chr8 (122-211)||(9497854-9497943)
chr8 (123-211)||(5328916-5329004)
chr8 (121-211)||(2261329-2261419)
chr8 (121-211)||(26988388-26988478)
chr8 (121-211)||(38210635-38210725)
chr8 (122-205)||(39646639-39646722)
chr8 (125-203)||(44000566-44000644)
chr8 (134-211)||(26521980-26522057)
chr8 (121-200)||(10706556-10706635)
chr8 (121-211)||(1043375-1043465)
chr8 (121-211)||(15451422-15451512)
chr8 (121-203)||(29265590-29265672)
chr8 (123-200)||(39300086-39300163)
chr8 (123-211)||(36667551-36667639)
chr8 (121-203)||(34165910-34165993)
chr8 (123-202)||(43841846-43841925)
chr8 (121-203)||(40776638-40776720)
chr8 (121-201)||(2749316-2749396)
chr8 (121-203)||(34634177-34634258)
chr8 (120-205)||(38329451-38329536)
chr8 (123-211)||(6630912-6631000)
chr8 (122-199)||(34520897-34520975)
chr8 (121-192)||(31158888-31158959)
chr8 (121-171)||(38764739-38764790)
chr8 (121-171)||(17792559-17792609)
chr8 (123-164)||(15231349-15231390)
chr8 (115-198)||(44636916-44636999)
[»] chr4 (45 HSPs)
chr4 (121-211)||(126893-126983)
chr4 (121-211)||(27990537-27990627)
chr4 (121-211)||(1857119-1857209)
chr4 (121-211)||(4720786-4720876)
chr4 (123-211)||(8256757-8256845)
chr4 (123-211)||(8270175-8270263)
chr4 (120-211)||(29364497-29364588)
chr4 (129-207)||(24535491-24535569)
chr4 (119-211)||(53936506-53936598)
chr4 (121-211)||(26118068-26118158)
chr4 (121-211)||(28835789-28835879)
chr4 (123-211)||(50733173-50733261)
chr4 (121-203)||(42177343-42177425)
chr4 (121-203)||(3763436-3763518)
chr4 (121-211)||(27761401-27761491)
chr4 (121-211)||(34829038-34829128)
chr4 (121-203)||(38008477-38008559)
chr4 (121-211)||(45692623-45692713)
chr4 (121-203)||(30348164-30348246)
chr4 (121-211)||(33491163-33491253)
chr4 (121-203)||(36631037-36631118)
chr4 (121-202)||(9356382-9356463)
chr4 (122-211)||(24979944-24980032)
chr4 (110-211)||(54996418-54996519)
chr4 (122-211)||(56303153-56303242)
chr4 (123-211)||(52607571-52607659)
chr4 (120-211)||(5970699-5970790)
chr4 (123-205)||(31999047-31999128)
chr4 (121-203)||(32288904-32288986)
chr4 (121-203)||(50776095-50776177)
chr4 (122-203)||(50608008-50608089)
chr4 (121-185)||(29582307-29582371)
chr4 (132-200)||(48647031-48647099)
chr4 (121-199)||(352475-352553)
chr4 (126-211)||(43735448-43735534)
chr4 (121-205)||(23058766-23058850)
chr4 (168-211)||(583085-583128)
chr4 (132-195)||(5340300-5340363)
chr4 (121-198)||(32570695-32570773)
chr4 (121-171)||(19527078-19527129)
chr4 (120-163)||(43147860-43147903)
chr4 (122-171)||(39103539-39103589)
chr4 (147-205)||(50383356-50383414)
chr4 (120-171)||(12756357-12756409)
chr4 (167-211)||(32845702-32845746)
[»] chr1 (52 HSPs)
chr1 (123-211)||(52861300-52861388)
chr1 (120-211)||(47544612-47544703)
chr1 (121-211)||(2249588-2249678)
chr1 (121-211)||(8396664-8396754)
chr1 (121-211)||(31821572-31821662)
chr1 (121-211)||(46641832-46641922)
chr1 (123-211)||(38718047-38718135)
chr1 (121-211)||(13202937-13203027)
chr1 (121-211)||(24003420-24003510)
chr1 (121-211)||(35873937-35874027)
chr1 (121-211)||(45622481-45622571)
chr1 (121-211)||(48976876-48976966)
chr1 (121-211)||(12105161-12105251)
chr1 (121-211)||(51787465-51787555)
chr1 (122-203)||(34038163-34038244)
chr1 (121-211)||(24230570-24230660)
chr1 (121-211)||(30320891-30320981)
chr1 (121-211)||(44263972-44264062)
chr1 (126-211)||(6966224-6966309)
chr1 (123-211)||(31084922-31085010)
chr1 (121-211)||(31530308-31530398)
chr1 (121-211)||(38261119-38261208)
chr1 (122-211)||(52180548-52180637)
chr1 (121-211)||(10348028-10348115)
chr1 (120-203)||(7227570-7227653)
chr1 (121-200)||(25702436-25702515)
chr1 (123-210)||(51056512-51056599)
chr1 (121-200)||(52345600-52345679)
chr1 (126-203)||(477448-477525)
chr1 (121-178)||(10408643-10408700)
chr1 (123-203)||(42275338-42275418)
chr1 (124-199)||(47693526-47693601)
chr1 (121-203)||(46362024-46362106)
chr1 (121-205)||(6526429-6526513)
chr1 (121-203)||(9587967-9588049)
chr1 (121-203)||(46235155-46235237)
chr1 (122-203)||(17553818-17553899)
chr1 (121-171)||(38207530-38207581)
chr1 (165-211)||(12907574-12907620)
chr1 (122-199)||(24381647-24381724)
chr1 (126-211)||(31075614-31075699)
chr1 (122-174)||(6468793-6468845)
chr1 (123-163)||(48760427-48760467)
chr1 (159-211)||(52441116-52441168)
chr1 (121-163)||(7435876-7435919)
chr1 (121-200)||(14152688-14152767)
chr1 (121-171)||(40054942-40054993)
chr1 (121-171)||(43916347-43916398)
chr1 (121-198)||(32912212-32912290)
chr1 (125-198)||(39084715-39084788)
chr1 (170-211)||(30263632-30263673)
chr1 (122-154)||(30572673-30572705)
[»] chr5 (38 HSPs)
chr5 (121-211)||(2852013-2852103)
chr5 (121-211)||(33678473-33678563)
chr5 (123-211)||(40803636-40803724)
chr5 (121-211)||(14434819-14434909)
chr5 (122-211)||(9604433-9604522)
chr5 (120-211)||(28318347-28318438)
chr5 (121-211)||(42597475-42597564)
chr5 (132-211)||(35370410-35370489)
chr5 (123-211)||(9910042-9910130)
chr5 (133-211)||(5360041-5360119)
chr5 (120-199)||(39816505-39816584)
chr5 (129-211)||(9913198-9913279)
chr5 (143-211)||(8258710-8258779)
chr5 (123-199)||(13119126-13119202)
chr5 (123-211)||(34259855-34259943)
chr5 (121-211)||(6260333-6260423)
chr5 (121-203)||(13127304-13127386)
chr5 (120-198)||(40563115-40563193)
chr5 (121-211)||(42486606-42486696)
chr5 (120-184)||(702292-702356)
chr5 (131-211)||(30753458-30753538)
chr5 (123-203)||(33210693-33210773)
chr5 (132-211)||(3024163-3024242)
chr5 (121-200)||(36427906-36427985)
chr5 (133-211)||(3426105-3426183)
chr5 (121-203)||(29960190-29960272)
chr5 (122-205)||(479676-479759)
chr5 (123-201)||(9630387-9630465)
chr5 (121-198)||(39979671-39979749)
chr5 (121-171)||(40756542-40756593)
chr5 (121-170)||(5204618-5204668)
chr5 (121-198)||(31588562-31588640)
chr5 (121-198)||(4367115-4367194)
chr5 (120-199)||(29744229-29744308)
chr5 (121-171)||(39939034-39939085)
chr5 (121-199)||(27980101-27980179)
chr5 (121-162)||(30753422-30753463)
chr5 (121-205)||(4617020-4617104)
[»] chr3 (62 HSPs)
chr3 (121-211)||(30349319-30349409)
chr3 (121-211)||(53289231-53289321)
chr3 (123-211)||(7352169-7352257)
chr3 (113-211)||(46507354-46507451)
chr3 (122-213)||(41217368-41217459)
chr3 (121-203)||(1021297-1021379)
chr3 (121-211)||(26850241-26850331)
chr3 (121-211)||(35501105-35501195)
chr3 (126-211)||(26012203-26012288)
chr3 (126-211)||(50258116-50258201)
chr3 (116-211)||(39987347-39987442)
chr3 (121-211)||(1129130-1129220)
chr3 (121-211)||(40478073-40478163)
chr3 (120-211)||(54428810-54428901)
chr3 (121-211)||(29388696-29388786)
chr3 (121-211)||(44379415-44379505)
chr3 (134-211)||(34825583-34825660)
chr3 (121-211)||(26884974-26885064)
chr3 (121-211)||(35137755-35137845)
chr3 (121-203)||(37520703-37520785)
chr3 (121-211)||(42621849-42621939)
chr3 (122-211)||(47746144-47746233)
chr3 (127-211)||(9507218-9507302)
chr3 (127-211)||(9515193-9515277)
chr3 (123-211)||(23456773-23456861)
chr3 (123-211)||(37127807-37127894)
chr3 (121-211)||(25834545-25834635)
chr3 (121-211)||(36220721-36220811)
chr3 (139-211)||(13756324-13756397)
chr3 (122-211)||(43745348-43745437)
chr3 (123-211)||(7862760-7862848)
chr3 (119-211)||(15997136-15997228)
chr3 (121-211)||(25482252-25482342)
chr3 (121-211)||(26456955-26457044)
chr3 (121-211)||(42479000-42479090)
chr3 (121-203)||(44653494-44653576)
chr3 (121-211)||(51344688-51344777)
chr3 (129-211)||(54788630-54788712)
chr3 (122-211)||(41982300-41982389)
chr3 (120-211)||(40474151-40474241)
chr3 (121-199)||(4817077-4817155)
chr3 (123-197)||(27045023-27045097)
chr3 (123-205)||(51756096-51756178)
chr3 (146-211)||(48825425-48825490)
chr3 (121-205)||(32636948-32637032)
chr3 (147-203)||(39678430-39678486)
chr3 (129-203)||(50412080-50412153)
chr3 (123-211)||(36099480-36099568)
chr3 (121-183)||(40784495-40784557)
chr3 (133-203)||(44522314-44522384)
chr3 (126-199)||(24170258-24170331)
chr3 (121-197)||(35375512-35375589)
chr3 (121-205)||(40021401-40021485)
chr3 (151-211)||(45538676-45538736)
chr3 (121-171)||(32121900-32121951)
chr3 (121-163)||(43903435-43903478)
chr3 (121-171)||(8966286-8966336)
chr3 (157-211)||(29491939-29491993)
chr3 (121-170)||(29698323-29698373)
chr3 (121-163)||(29806372-29806414)
chr3 (129-203)||(35389300-35389374)
chr3 (123-171)||(50029754-50029802)
[»] chr2 (33 HSPs)
chr2 (121-211)||(9122157-9122247)
chr2 (121-211)||(25331456-25331546)
chr2 (121-211)||(32602304-32602394)
chr2 (121-211)||(43439996-43440086)
chr2 (121-211)||(7673296-7673386)
chr2 (123-211)||(17451285-17451373)
chr2 (121-211)||(9589429-9589519)
chr2 (121-211)||(21404199-21404289)
chr2 (121-211)||(32401080-32401170)
chr2 (121-211)||(4740540-4740630)
chr2 (120-211)||(33493787-33493878)
chr2 (133-211)||(18998728-18998806)
chr2 (122-207)||(6945661-6945746)
chr2 (115-211)||(4297892-4297988)
chr2 (121-211)||(35895312-35895402)
chr2 (126-211)||(4048984-4049068)
chr2 (121-211)||(1580248-1580338)
chr2 (129-203)||(30981209-30981283)
chr2 (121-203)||(40495770-40495852)
chr2 (122-203)||(45157837-45157918)
chr2 (122-211)||(40946764-40946853)
chr2 (142-211)||(44143228-44143296)
chr2 (123-211)||(14840113-14840199)
chr2 (121-166)||(12002704-12002750)
chr2 (121-198)||(38073107-38073185)
chr2 (123-155)||(36754339-36754371)
chr2 (121-184)||(39620862-39620925)
chr2 (121-171)||(41555432-41555483)
chr2 (121-203)||(27401053-27401135)
chr2 (112-199)||(33494261-33494350)
chr2 (121-198)||(37781867-37781945)
chr2 (121-205)||(3261227-3261311)
chr2 (116-171)||(34188889-34188945)
[»] chr6 (22 HSPs)
chr6 (129-211)||(33574242-33574324)
chr6 (121-211)||(23416812-23416902)
chr6 (112-211)||(9662073-9662171)
chr6 (121-211)||(11763174-11763264)
chr6 (121-211)||(33574668-33574758)
chr6 (121-211)||(33574846-33574936)
chr6 (122-203)||(9687099-9687180)
chr6 (121-211)||(4509745-4509834)
chr6 (121-203)||(18772183-18772265)
chr6 (121-211)||(242886-242976)
chr6 (121-211)||(3141041-3141131)
chr6 (132-211)||(1245135-1245214)
chr6 (121-203)||(8549564-8549646)
chr6 (121-184)||(23069042-23069105)
chr6 (121-198)||(1339701-1339778)
chr6 (121-203)||(14779227-14779308)
chr6 (121-200)||(4576711-4576790)
chr6 (121-171)||(10965978-10966029)
chr6 (121-171)||(24249160-24249211)
chr6 (121-163)||(31644411-31644453)
chr6 (125-185)||(6295719-6295779)
chr6 (125-185)||(6302529-6302589)
[»] scaffold0667 (1 HSPs)
scaffold0667 (121-211)||(148-238)
[»] scaffold0308 (1 HSPs)
scaffold0308 (121-211)||(7519-7609)
[»] scaffold0923 (1 HSPs)
scaffold0923 (121-210)||(1-90)
[»] scaffold0271 (1 HSPs)
scaffold0271 (121-199)||(16987-17066)
[»] scaffold0432 (1 HSPs)
scaffold0432 (121-205)||(3033-3113)


Alignment Details
Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 1268906 - 1269099
Alignment:
Q  17 aaaataattcccttcattgcttcnnnnnnntaaataatttccttcatgaaacctaaacattagttgcatttaaaaccgtacacattttcccg-ttatata 115  Q
    |||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  1268906 aaaataattcccttcattgcttcaaaaaa--aaataatttccttcatgaaacctaaacattagttgcatttaaaaccgtaaacactttccccattatata 1269003  T
Q  116 ttagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||||   |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1269004 ttaggggaacttctatggttcactcacaaaatgaggtgtatcggtatccctgcttcttaattttataaacgaacgatcattttttatgtagtaaat 1269099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 15716310 - 15716222
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaa 210  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||    
T  15716310 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattttataaatgaacgatcattttttatgtagtaaa 15716222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 11750420 - 11750510
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||| || ||||| |||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  11750420 ggaacttctacggtacactcacaaaataagatgtattggtactcctgcttcttaattttataattgaacgatcattttttatgtagtaaat 11750510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 24952928 - 24953017
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||| |||| ||||| | || ||||||||||| ||||||||||||||||||||||||||||||||    
T  24952928 gaacttctacggtacactcacaaaatgagatgtaccggtattcctacttcttaattttataaatgaacgatcattttttatgtagtaaat 24953017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 46575102 - 46575181
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  46575102 ggaacttctacggtacattcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcatttttt 46575181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 29606269 - 29606359
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||||  || |||  ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  29606269 ggaacttctacggtacactcacaaaatgaggtgtactgggactcttgcttcttaattttataaatgaacgattattttttatgtagtaaat 29606359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 38665458 - 38665548
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| | | | |||||||| ||||||||||||||||||||||||||||||||    
T  38665458 ggaacttctacggtacactcacaaaatgaagtgtaccggtactccggttccttaattttataaatgaacgatcattttttatgtagtaaat 38665548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 30077044 - 30076956
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||||||||||||||||||||||  ||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||    
T  30077044 aacttttacggtacactcacaaaatgaggtgtgccggtactcctccttcttaattttataaatgaatgatcattttttatgtagtaaat 30076956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 47642904 - 47642814
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||| |||| |  ||||  ||||||||||||| |||||||||||||| |||||||||||||||||    
T  47642904 ggaacttctacggtacactcacaaaatgagatgtaccaatactcatgcttcttaattttataaatgaacgatcgttttttatgtagtaaat 47642814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 7574552 - 7574642
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || |||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  7574552 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaat 7574642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 23406653 - 23406735
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||||| ||| || |||||||||||||||||    
T  23406653 ggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatg 23406735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 26605057 - 26605147
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||| |||||| ||||||||| || |||||    
T  26605057 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatataataaat 26605147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 28264751 - 28264841
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || |||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  28264751 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaat 28264841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 15954666 - 15954587
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | |||| |||||| |||||| ||||||||||||||    
T  15954666 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcatttttt 15954587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 23110439 - 23110521
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||| ||||  |||||| ||| || ||||||| ||||||||| ||||||||||||||||||||||    
T  23110439 tacggtacactcacaaaatgagatgtactggtactcctgttttttaattttataaatgaatgatcattttttatgtagtaaat 23110521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 32529181 - 32529263
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||  ||||||||||  | |||| |||||| |||||| |||||||||||||||||    
T  32529181 ggaacttctacggtacactcacaaaatgaggcatatcggtactctttcttcataattttataaattaacgatcattttttatg 32529263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 35291327 - 35291409
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | |||| |||||| |||||| |||||| ||||||||||    
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgattattttttatg 35291409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 38666275 - 38666185
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| ||||||  |||||| ||||||||||||||| ||||||| ||| || ||||||| ||||||||||||||||||||||||| ||||||    
T  38666275 ggaatttctactatacacttacaaaatgaggtgtaccggtactcctgttttttaattttataaatgaacgatcattttttatgtggtaaat 38666185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 41968435 - 41968515
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||||||||||  |  ||| |||||| |||||| |||||| ||||||||||    
T  41968435 aacttctacggtacactcacaaaatgaggtgtatcggtactcttttttcataattttataaattaacgattattttttatg 41968515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 3214931 - 3214836
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttc-----tgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |     |||||| |||||| |||||| ||||||||||||||||||| |||||    
T  3214931 ggaacttctacggtacactcacaaagtgaggtgtaccggtactccagtcttgcttcataattttataaattaacgatcattttttatgtaataaat 3214836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 39558980 - 39558905
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattt 197  Q
    |||||||||| ||||||| | ||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||    
T  39558980 gaacttctacagtacacttataaaatgaggtgtaccggtccttctacttcttaattttataaatgaacgatcattt 39558905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 24812483 - 24812397
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| ||| || ||||||| |||||||||    |||||||||||||||||||    
T  24812483 ggaacttctacgatacactaacaaaataaggtgtatcggtactcctgttttttaattttataaatgaa----cattttttatgtagtaaat 24812397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 6791445 - 6791527
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |  ||| |||||| |||||  |||||||||||||||||    
T  6791445 ggaacttctacggtacacttacaaaatgaggtgtaccggtactcttttttcataattttataaagtaacgatcattttttatg 6791527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 5582862 - 5582946
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||||||||||||||||||| ||| |||||||||||||   ||||| ||| || | |||| ||||||||||||| |||||    
T  5582862 ggaacttctacggtacactcacaaagtgatgtgtatcggtactctcgcttcgtaaatttacaaattaacgatcatttttcatgta 5582946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 35358108 - 35358026
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||| |||||||||||||||||||||||||||||| ||||| |  | |||  |||||| |||||| || ||||||||||||||    
T  35358108 ggaatttctacggtacactcacaaaatgaggtgtaccggtagtctttcttaataattttataaattaaagatcattttttatg 35358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 37504564 - 37504642
Alignment:
Q  125 cttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||  | ||||  |  ||| |||||| |||||| |||||||||||||||||    
T  37504564 cttctacggtacactcacaaaatgaggtgtactgatactctttattcataattttataaattaacgatcattttttatg 37504642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 41046839 - 41046921
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||| |||||||||||||| ||||| ||||||||| || ||||  |||||  |||||| |||||| |||||| ||||||||||    
T  41046839 ggaatttctacggtacacttacaaagtgaggtgtaccgatactattgctttataattttataaattaacgataattttttatg 41046921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 45232053 - 45232138
Alignment:
Q  125 cttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||| || || | ||||| |||||||  ||| ||||||||| |||||| || |||||||||||||||| |||||    
T  45232053 cttctacggtacactcataagat-atgtgtaccggtactcttgcatcttaattttataaattaatgatcattttttatgtaataaat 45232138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 3602624 - 3602583
Alignment:
Q  170 tcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  3602624 tcttaattttataaattaacgatcattttttatgtagtaaat 3602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 30891662 - 30891581
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttat 202  Q
    |||||||| |||| ||| ||||||||| ||||||| || ||||  | |||| |||||| |||||| ||||||||||||||||    
T  30891662 ggaacttcaacggcacaatcacaaaataaggtgtaccgatactctttcttcataattttataaattaacgatcattttttat 30891581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 17306603 - 17306686
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||| |||||||||||||| |||| |||| |||||||   ||||| | |||| | |||| ||||||||||||| |||||    
T  17306603 gaacttctatggtacactcacaaagtgagatgtaccggtactctcgcttcatgattttacaaattaacgatcatttttcatgta 17306686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 21919689 - 21919740
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  21919689 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 21919740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Complemental strand, 5215430 - 5215380
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgctt 170  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  5215430 ggaacttctacggtacacatcacaaattgaggtgtaccggtactcctgctt 5215380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 23585625 - 23585683
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttc 179  Q
    |||||||||||||||||||| | || ||||||||| | ||||||||| || ||||||||    
T  23585625 ggaacttctacggtacactcgctaagtgaggtgtaccagtacttctgtttattaatttc 23585683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 36533327 - 36533361
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgta 155  Q
    |||||||||||||||||||||||| ||||||||||    
T  36533327 ggaacttctacggtacactcacaagatgaggtgta 36533361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 42584167 - 42584089
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    ||||||||||||||||| |||||||| ||| ||||| || |||| ||||||| ||| || |||||| || |||||||||    
T  42584167 ggaacttctacggtacacctcacaaattgatgtgtaccgatactcctgcttcataaatttataaattaatgatcatttt 42584089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1319 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 35 - 134
Alignment:
Q  112 tatattagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  35 tatattatgggaacttctacggtacactcacaaaatgaggtgtattggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 4e-37; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 40579101 - 40579011
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40579101 ggaacttctgcggtacactcacaaaatgaagtgtatcggtacttctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 40579011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 6982785 - 6982876
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6982785 aggaacttctatggtacactcataaaatgaggtgtatcggtacttttgcttcttaattttataaatgaacgatcattttttatgtagtaaat 6982876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 118214 - 118125
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  118214 gaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctataaatgaacgatcattttttatgtagtaaat 118125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 41720654 - 41720564
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||| || |||||||||| ||| ||||||| |||||||||||||||||||||||| |||||||    
T  41720654 ggaacttctacggtacactcacaaaatgaggtataccggtacttctactttttaattttataaatgaacgatcattttttatgcagtaaat 41720564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 7128091 - 7128181
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||||||||||||||||||| || |||| |||||||||||||  ||||||||||||| ||||||||||||||||||    
T  7128091 ggaacttctatggtacactcacaaaatgaggtgtaccgatactcctgcttcttaattctataaatgaacgataattttttatgtagtaaat 7128181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 40267887 - 40267798
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  40267887 ggaacttctacggtacacttacaaaatgaggtgtatcagta-ttctacttcttaattttataaatgaacgaccattttttatgtagtaaat 40267798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 37675943 - 37676028
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||| |||||    
T  37675943 ttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaat 37676028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 27847874 - 27847784
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| ||||| ||||| |||||||||||||||||| | ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||    
T  27847874 ggaatttctagggtacgctcacaaaatgaggtgtaccagtacttctgtttcttaattttataaatggacgatcattttttatgtagtaaat 27847784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 29454144 - 29454234
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| | ||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  29454144 ggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 29454234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 9497943 - 9497854
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||| ||||||||| |||||| || ||||||||||||||| ||||||    
T  9497943 gaacttctacggtacactcacaagatgaggtgtatcggtactcttgcatcttaattttataaattaatgatcattttttatgttgtaaat 9497854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 5329004 - 5328916
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||| | | ||||||||||||  ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  5329004 aacttctacggtacatttataaaatgaggtgtcccggtactcctgcttcttaattttataaatgaatgatcattttttatgtagtaaat 5328916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 2261419 - 2261329
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||||||||| ||||||||| ||||||| ||||||| ||||||  ||||| ||||||||||||||||||| |||||    
T  2261419 ggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaat 2261329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 26988388 - 26988478
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| |||||||||||||||| |||||||||| | |||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  26988388 ggaacttttacggtacactcacaagatgaggtgtacctgtactcttgcatcttaattttataaattaacgatcattttttatgtagtaaat 26988478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 38210725 - 38210635
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || |||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  38210725 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaat 38210635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 39646639 - 39646722
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||||||||||||||||| | ||||| ||||||| ||||||| || ||||||||||| |||||||||||||| |||||||||||    
T  39646639 gaacttctacggtacacttataaaataaggtgtaccggtactcctacttcttaattttataaatgaacgatcgttttttatgta 39646722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 44000566 - 44000644
Alignment:
Q  125 cttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||||||||  | |||| |||||| |||||| |||||| ||||||||||    
T  44000566 cttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgattattttttatg 44000644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 26521980 - 26522057
Alignment:
Q  134 tacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||| | ||||| |||||||||||||| |||||||||| || || |||||||||||||||    
T  26521980 tacactcacaaaatgaggtgtaccagtactcctgcttcttaattttataaatgaacaataatattttatgtagtaaat 26522057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 10706556 - 10706635
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||||||||||| |||||||||  ||||||  |||||| |||||| |||||| ||||||||||||||    
T  10706556 ggaacttctacggtacactcacaaagtgaggtgtactggtactcttgcttcataattttataaattaacgatcatttttt 10706635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 1043465 - 1043375
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||| |  |||| | ||||||| |||||| ||| || ||||||||||||||||||| |||||    
T  1043465 ggaacttctacggtacactcacaaagtgaggtgcactggtattcctgcttcataattttatatattaacgatcattttttatgtaataaat 1043375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 15451422 - 15451512
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| | ||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||| | ||||||||    
T  15451422 ggaacttctatgttacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaacgatcattttttttatagtaaat 15451512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 29265590 - 29265672
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||  || ||| |||||| |||||| |||||||||||||||||    
T  29265590 ggaacttctactgtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatg 29265672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 39300086 - 39300163
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||| ||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||| || |||||||||||    
T  39300086 aacttttacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaatgatcatttttt 39300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 36667639 - 36667551
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||| ||||  |||||||||| ||||| || |  ||||||||||||| ||||||||||||| ||||||||||||||||||    
T  36667639 aacttgtacggtagactcgtaaaatgaggtctatcgatattcgtgcttcttaattttataaatgaacgattattttttatgtagtaaat 36667551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 34165910 - 34165993
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaa-tgaacgatcattttttatg 203  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||  |||||| |||||| ||||| | |||||||||||||||||    
T  34165910 ggaacttctaccgtacacttacaaagtgaggtgtatcggtactcttgcttcataattttataaatttaacgatcattttttatg 34165993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 202
Target Start/End: Original strand, 43841846 - 43841925
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttat 202  Q
    ||||||||||||||||||| ||||| |||||||| ||||||  | |||| |||||| |||||| ||||||||||||||||    
T  43841846 aacttctacggtacactcataaaataaggtgtattggtactctttcttcataattttataaattaacgatcattttttat 43841925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 40776638 - 40776720
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||| ||||| |||||||||||||| |||| |||| || |||| ||||||| |||||| |||||| |||||||||||||||||    
T  40776638 ggaatttctatggtacactcacaaagtgagatgtaccgatactcctgcttcataattttataaattaacgatcattttttatg 40776720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 2749316 - 2749396
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttta 201  Q
    ||||||||||||||| ||||||||||||||||||| |||||||  |  | | |||||| |||||| |||||||||||||||    
T  2749316 ggaacttctacggtaaactcacaaaatgaggtgtaccggtactctttttgcataattttataaattaacgatcatttttta 2749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 34634258 - 34634177
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||| |||||||||| |||| |||||||  |  ||| |||||| |||||| |||||||||||||||||    
T  34634258 ggaacttctacggtacact-acaaaatgagatgtaccggtactcttttttcataattttataaattaacgatcattttttatg 34634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 38329451 - 38329536
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||||||||||||||||||||||||| |||| | || |||||||   ||||  |||||| |||||| ||||||||||||| |||||    
T  38329451 aggaacttctacggtacactcacaaagtgagatataccggtactctcgctttataattttataaattaacgatcatttttcatgta 38329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 6630912 - 6631000
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| |||| |||||||| ||||||| || ||||| |  ||| ||||||||| |||||| ||  |||||||||||||||||||||    
T  6630912 aacttctatggtatactcacaagatgaggtataccggtagtcttgcatcttaattttataaattaataatcattttttatgtagtaaat 6631000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 34520975 - 34520897
Alignment:
Q  122 gaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||||||||||||| ||||||| |||||||||||| |||| || |||| ||| || || ||| |||||||||||||    
T  34520975 gaacttctacggtacacctcacaaattgaggtgtatcgatactcctacttcataaatttatgaattaacgatcattttt 34520897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 31158959 - 31158888
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgat 192  Q
    |||||||||||||||||||| |||| ||||||||||| |||||  |||||| ||| |  |||||| ||||||    
T  31158959 ggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaacgat 31158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 38764739 - 38764790
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| |||||||    
T  38764739 ggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttc 38764790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 17792609 - 17792559
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||| |||||||||| ||| | ||||||||||||||| |||||||    
T  17792609 ggaacttctatggtacactcataaattaaggtgtatcggtactcctgcttc 17792559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 15231390 - 15231349
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtactt 164  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||    
T  15231390 aacttctacggtacactcataaagtgaggtgtaccggtactt 15231349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 44636916 - 44636999
Alignment:
Q  115 attagaggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    ||||| ||| ||||||||||||| |||||||| ||||||||| || || ||||||||| ||| || |||||| || |||||||||    
T  44636916 attaggggagcttctacggtacacctcacaaattgaggtgtaccgata-ttctgcttcataaatttataaattaatgatcatttt 44636999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 4e-37; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 126983 - 126893
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  126983 ggaacttctacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 126893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 27990537 - 27990627
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  27990537 ggaacttctacgatacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 27990627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 1857209 - 1857119
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| || |||||||||||||||||    
T  1857209 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacggtcgttttttatgtagtaaat 1857119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 4720876 - 4720786
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  4720876 ggaacttatacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaacgatcaatttttatgtagtaaat 4720786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 8256845 - 8256757
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||    
T  8256845 aacttttacggtacactcacaaaatgaggtgtatcggtactcctccttcttaattttataaatgaatgatcattttttatgtagtaaat 8256757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 8270263 - 8270175
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||    
T  8270263 aacttttacggtacactcacaaaatgaggtgtatcggtactcctccttcttaattttataaatgaatgatcattttttatgtagtaaat 8270175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 29364588 - 29364497
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||    
T  29364588 aggaacttctactgtacactcacaaaatgaggtgtaccggtactcctgctttttaattttatgaatgaacgatcattttttatgtagtaaat 29364497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 24535491 - 24535569
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagt 207  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  24535491 tacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagt 24535569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 53936506 - 53936598
Alignment:
Q  119 gaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| || ||||||||||||||||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  53936506 gaggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaacgatcattttttatgtagtaaat 53936598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 26118158 - 26118068
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  26118158 ggaacttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaatcaacgatcattttttatgtagtaaat 26118068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 28835789 - 28835879
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| ||||||||||||||||||||||||| |  |||||| |||||||||||||| |||||||||||||| |||||||||||||||||    
T  28835789 ggaacttttacggtacactcacaaaatgaggtgaactggtactcctgcttcttaattttataaatgaacgatcgttttttatgtagtaaat 28835879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 50733261 - 50733173
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||| |||||||||||||||||| || |||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||    
T  50733261 aacttccacggtacactcacaaaataagatgtatcggtactcctgttttttaattttataaatgaacgatcattttttatgtagtaaat 50733173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 42177343 - 42177425
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||| |||||| |||||| |||||||||||||||||    
T  42177343 ggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgatcattttttatg 42177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 3763518 - 3763436
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| | |||| |||||| |||||| |||||| ||||||||||    
T  3763518 ggaacttctaccgtacactcacaaaataaggtgtatcggtactttttcttcataattttataaattaacgattattttttatg 3763436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 27761401 - 27761491
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||||||||||||| |||||||||||||||||  |||||| |||||| || ||| |||||| |||||||||||| |||||    
T  27761401 ggaatttctacggtacactcacaaagtgaggtgtatcggtactcttgcttcataattttatgaattaacgataattttttatgtaataaat 27761491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 34829128 - 34829038
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| ||||||||||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||| ||||||||||| ||||||    
T  34829128 ggaatttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaacgataattttttatgttgtaaat 34829038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 38008559 - 38008477
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  | |||| |||||| |||||| |||||||||||||||||    
T  38008559 ggaacttctacggtgcactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaacgatcattttttatg 38008477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 45692623 - 45692713
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || ||||  ||||||||||||| ||||||||||||| |||||||||||| |||||    
T  45692623 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcttgcttcttaattttataaatgaacgataattttttatgtaataaat 45692713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 30348164 - 30348246
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||| |||||||||| ||||||||||||||||| |||||||  | |||| |||||| |||||| |||||||||||||||||    
T  30348164 ggaactactacggtacaatcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatg 30348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 33491163 - 33491253
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||| ||||||| |||| |||| ||||||| ||||||| |||||  |||||| ||||||||| ||||||||| |||||    
T  33491163 ggaacttctacggtacattcacaaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcatattttatgtaataaat 33491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 36631037 - 36631118
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||| | |  ||| |||||| |||||| |||||||||||||||||    
T  36631037 ggaacttctacggtacactcacaaaatgaggtgtaacggtac-tatttttcataattttataaattaacgatcattttttatg 36631118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 9356382 - 9356463
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttat 202  Q
    ||||||||||||||| |||||||||||||| |||||  ||||||||||||| |||||| |||||| ||  ||||||||||||    
T  9356382 ggaacttctacggtatactcacaaaatgagatgtattagtacttctgcttcataattttataaattaaaaatcattttttat 9356463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 24979944 - 24980032
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||| ||||||| |||||||  |||||| | |||| |||||| |||||| |||||||||||| |||||    
T  24979944 gaacttctacggtacactcacaaaataaggtgtaccggtactattgcttcat-attttataaattaacgataattttttatgtaataaat 24980032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 54996519 - 54996418
Alignment:
Q  110 tatatattagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaa 209  Q
    ||||||||  |||||||||||  ||||| ||| ||| ||||||||| ||||||| ||| ||| |||||| |||||| ||||||||||||||||||| |||    
T  54996519 tatatattttaggaacttctatagtacattcataaagtgaggtgtaacggtactcctgtttcataattttataaattaacgatcattttttatgtaataa 54996420  T
Q  210 at 211  Q
    ||    
T  54996419 at 54996418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 56303242 - 56303153
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||||||||| ||| ||||||||| ||||||| ||||||  |||||| |||||| |||||| |||||||||||| |||||    
T  56303242 gaacttctatggtacactcataaagtgaggtgtaccggtactcctgctttataattttataaattaacgataattttttatgtaataaat 56303153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 52607571 - 52607659
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||| |||||| |||||||||| |||||||  ||| ||||||||| |||||| ||| || ||||||||| ||||||||    
T  52607571 aacttctacggtacattcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaacaattattttttatctagtaaat 52607659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 5970699 - 5970790
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||| | |||| |||| |||||||  |||||| |||||| |||||| ||  ||||||||||||||| |||||    
T  5970699 aggaacttctacggtacactcacatagtgagatgtaccggtactcttgcttcataattttataaattaataatcattttttatgtaataaat 5970790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 31999128 - 31999047
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||||||||||||| ||| |||||||||||||||||  |||||| |||||| || ||| |||||| ||||||||||||    
T  31999128 aacttctacggtacactcataaagtgaggtgtatcggtactcttgcttcataattttat-aattaacgataattttttatgta 31999047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 32288904 - 32288986
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||| |||||||||| | ||| ||| |||||| |||||||||||||||||| |||||| ||| || |||||||||||||||||    
T  32288904 ggaatttctacggtatattcataaagtgaggtatatcggtacttctgcttcataattttatatattaacgatcattttttatg 32288986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 50776177 - 50776095
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||| | |||||||||||||||||||||  |  ||| |||||| |||||| ||| |||||||||||||    
T  50776177 ggaacttctacggtacacttataaaatgaggtgtatcggtactattttttcataattttataaattaacaatcattttttatg 50776095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 50608089 - 50608008
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||| |  ||||  | |||| |||||| |||||| ||| |||||||||||||    
T  50608089 gaacttctacggtacactcacaaaatgaggtgtaccaatactctttcttcataattttataaattaacaatcattttttatg 50608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 29582371 - 29582307
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaat 185  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| | |||| |||||| ||||||    
T  29582371 ggaacttctacggtacactcacaaattgaggtgtaccggtacttttccttcataattttataaat 29582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 48647031 - 48647099
Alignment:
Q  132 ggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    |||||||||| |||||||||||||| ||||||| || ||| |||||| |||||| ||||||||||||||    
T  48647031 ggtacactcataaaatgaggtgtattggtacttttgtttcataattttataaattaacgatcatttttt 48647099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 352475 - 352553
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||||  ||||||||||||||| ||||||||| || |||| ||| ||| |||||| |||||| |||||||||||||    
T  352475 ggaacttccgcggtacactcacaaagtgaggtgtaccgatactcctgtttcataattttataaattaacgatcattttt 352553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 43735534 - 43735448
Alignment:
Q  126 ttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||| ||| || ||||||| || |||||||  ||| ||||||||| |||||| |||||||||||||||| ||||||||    
T  43735534 ttctacggtacacctcataagatgaggtataccggtactcttgcatcttaattttataaattaacgatcattttttatatagtaaat 43735448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 23058766 - 23058850
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||||||||||||||||||| |||| |||| |||||||   ||||| || ||| | |||| ||||||||||||| |||||    
T  23058766 ggaacttctacggtacactcacaaagtgagatgtaccggtactctcgcttcatacttttacaaattaacgatcatttttcatgta 23058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 583128 - 583085
Alignment:
Q  168 cttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  583128 cttcttaattttataaatgaacgattattttttatgtagtaaat 583085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 5340363 - 5340300
Alignment:
Q  132 ggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcat 195  Q
    |||||||||||||| | ||||||| ||||||| ||||||| |||||| |||||| |||||||||    
T  5340363 ggtacactcacaaagtaaggtgtaccggtactcctgcttcataattttataaattaacgatcat 5340300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 32570773 - 32570695
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||  | |||| ||| || |||||| ||||||||||||    
T  32570773 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatcatttt 32570695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 19527129 - 19527078
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  19527129 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 19527078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 43147903 - 43147860
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtact 163  Q
    ||||||||||||||||||||||||| ||||||| || |||||||    
T  43147903 aggaacttctacggtacactcacaagatgaggtataccggtact 43147860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 39103539 - 39103589
Alignment:
Q  122 gaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  39103539 gaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 39103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 50383356 - 50383414
Alignment:
Q  147 tgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||||||||||||||||   ||||| |||||| |||||| ||||||||||||| |||||    
T  50383356 tgaggtgtatcggtactctcgcttcataattttataaattaacgatcatttttcatgta 50383414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 12756409 - 12756357
Alignment:
Q  120 aggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||||| |||||||| ||||||||| ||||| | |||||||    
T  12756409 aggaacttctacggtacacctcacaaattgaggtgtaccggtattcctgcttc 12756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 32845702 - 32845746
Alignment:
Q  167 gcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| |||||| |||||| ||||||||||||||||||| |||||    
T  32845702 gcttcataattttataaattaacgatcattttttatgtaataaat 32845746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 52861300 - 52861388
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52861300 aacttttacggtacactcacaaaatgaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 52861388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 47544703 - 47544612
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  47544703 aggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 47544612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 2249588 - 2249678
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  2249588 ggaacttctgcggtacactcacaaaatgaggtgtatcggtactcctgtttcttaattttataaatgaacgatcattttttatgtagtaaat 2249678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 8396754 - 8396664
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  8396754 ggaatttctacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 8396664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 31821572 - 31821662
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||    
T  31821572 ggaacttctacggtacactcacaaaatgaggtgtagcggtactcctgcttcttaattttataaatgaacgatcattttttatgtattaaat 31821662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 46641922 - 46641832
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  46641922 ggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 46641832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 38718135 - 38718047
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||| ||||||||||||||||||||||    
T  38718135 aacttctacggtacactcacaaaatgaggtgtatcggtactcctccttattaattttataaatgaatgatcattttttatgtagtaaat 38718047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 13202937 - 13203027
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  13202937 ggaacttctactgtacactcagaaaatgaggtgtaccggtactcctgtttcttaattttataaatgaacgatcattttttatgtagtaaat 13203027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 24003420 - 24003510
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  24003420 ggaacttctacggtacactaacaaaatgaggtgttccggtactcctgcttcttaattttataaatgaatgataattttttatgtagtaaat 24003510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 35873937 - 35874027
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  35873937 ggaacttctacggtacactcacaaagtgagatgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaat 35874027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 45622481 - 45622571
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| |||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||    
T  45622481 ggaacttatacgttacactcacaaaatgaggtgtaccggtactcctacttcttaattttataaatgaacgatcattttttatatagtaaat 45622571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 48976876 - 48976966
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  48976876 ggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 48976966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 12105161 - 12105251
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||| |||||| |||||||||||| |||||    
T  12105161 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaat 12105251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 51787465 - 51787555
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| || ||||||||||||||||||  ||| ||||||||| |||||| || ||||||||||||||||||||||    
T  51787465 ggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaatgatcattttttatgtagtaaat 51787555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 34038163 - 34038244
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||||||||||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatg 34038244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 24230570 - 24230660
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| |||||||||  |||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  24230570 ggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaat 24230660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 30320891 - 30320981
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || |||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  30320891 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaat 30320981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 44264062 - 44263972
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||| ||| ||| |||||| |||||| ||||||||||||||||||| |||||    
T  44264062 ggaacatctacggtacactcacaaagtgaggtgtaccggtactcctgtttcataattttataaattaacgatcattttttatgtaataaat 44263972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 6966309 - 6966224
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||| ||||||| ||  |||||||||| ||||||||| ||||| |||||||||| |||||    
T  6966309 ttctacggtacactcacaaaatgaggtgtaccggtactcctcattcttaattttataaatgaatgatcaatttttatgtaataaat 6966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 31085010 - 31084922
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||| |||| |||||||||||||  | | ||||||||| |||||| |||||| ||||||||||||||||||    
T  31085010 aacttctacggtacactcacaagatgaagtgtatcggtactcttacatcttaattttataaattaacgattattttttatgtagtaaat 31084922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 31530308 - 31530398
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| ||||||| |||||||||||||||  |||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  31530308 ggaacttctaccgtacacttacaaaatgaggtgtactggtactcctgcttcataattttataaattaacgataattttttatgtaataaat 31530398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 38261208 - 38261119
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||| ||||||| |||||| || ||| ||||||||||||||||||| |||||    
T  38261208 ggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaat 38261119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 52180637 - 52180548
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||| ||||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaat 52180548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 10348028 - 10348115
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||| | ||||| || |||| |||||||||||||| ||||||   |||||||||||||| ||||||||    
T  10348028 ggaacttctacggtacactcacaaaataaagtgtaccgatactcctgcttcttaattttataaat---cgatcattttttatatagtaaat 10348115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 7227570 - 7227653
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||| || |||||||||||||||||||||||||||||| ||||  | |||| |||||| |||||| |||||||||||||||||    
T  7227570 aggaatttatacggtacactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaacgatcattttttatg 7227653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 25702436 - 25702515
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||  |||||| |||||| |||||| ||||||||||||||    
T  25702436 ggaacttctacggtacactcataaattgaggtgtaccggtactcttgcttcataattttataaatcaacgatcatttttt 25702515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 51056599 - 51056512
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaa 210  Q
    ||||||||||||||| ||||||| |||| |||| ||||||| ||||||| |||||  |||||| ||||||||||||||||||| ||||    
T  51056599 aacttctacggtacaatcacaaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcattttttatgtaataaa 51056512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 52345600 - 52345679
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  || ||| |||||| |||||| ||||||||||||||    
T  52345600 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcatttttt 52345679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 477448 - 477525
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||| ||||||||||  |  ||| |||||| |||||| |||||||||||||||||    
T  477448 ttctacggtacactcacaaaatgaggtctatcggtactcttttttcataattttataaattaacgatcattttttatg 477525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 10408700 - 10408643
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaattt 178  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  10408700 ggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattt 10408643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 42275338 - 42275418
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||| |||||||||| ||| ||||||||| |||||||  |||||| |||||| |||||| |||||||||||||||||    
T  42275338 aacttctaaggtacactcagaaagtgaggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatg 42275418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 47693601 - 47693526
Alignment:
Q  124 acttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||| |||||||||||||||||||||||| |||||||  |||||| |||||| |||||| |||||| ||||||    
T  47693601 acttctatggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttt 47693526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 46362024 - 46362106
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||| ||||||||||||||||| ||||||   |  ||| |||||| |||||| |||||||||||||||||    
T  46362024 ggaacttctacggtacattcacaaaatgaggtgtaccggtacccttttttcgtaattttataaattaacgatcattttttatg 46362106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 6526429 - 6526513
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||| |||||||||||||||||||| ||||||||| || ||||   | ||| |||||||| |||| |||||||||||||||||||    
T  6526429 ggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataatttcacaaattaacgatcattttttatgta 6526513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 9588049 - 9587967
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||| ||| |||||| || ||||||| ||||||| |||||| |||||| || ||| || |||||||    
T  9588049 ggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatg 9587967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 46235237 - 46235155
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||| |||||||||||||||  |||||   | |||| |||||| |||||| |||||| ||||||||||    
T  46235237 ggaacttctacggtacacttacaaaatgaggtgtactggtaccctttcttcataattttataaattaacgataattttttatg 46235155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 17553818 - 17553899
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||| ||| |||||||||||||||||| |||| | ||| || | |||| |||||| |||||| |||||||||||||||||    
T  17553818 gaacttataccgtacactcacaaaatgagatgtacctgtattttttcttcataattttataaattaacgatcattttttatg 17553899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 38207530 - 38207581
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  38207530 ggaacttctacggtacacctcataaattgaggtgtatcggtacttctgcttc 38207581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 12907620 - 12907574
Alignment:
Q  165 ctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  12907620 ctgcttcttaattttataaatgaacgataattttttatgtaataaat 12907574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 24381724 - 24381647
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||||||||||||||||||||  || ||||| |||||||   | ||| |||||| |||||| |||||||||||||    
T  24381724 gaacttctacggtacactcacaaagcgaagtgtaccggtactctcgtttcataattttataaattaacgatcattttt 24381647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 31075614 - 31075699
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| | |||| |||| ||| | |||||||  | | ||||||||| |||||| |||||| ||||||||||||||||||    
T  31075614 ttctacggtacatttacaagatgaagtgcaccggtactcttacatcttaattttataaattaacgattattttttatgtagtaaat 31075699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 6468793 - 6468845
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttctta 174  Q
    |||||||||||||||||||||||||| | | ||| ||||||| ||||||||||    
T  6468793 gaacttctacggtacactcacaaaataaagcgtaccggtactcctgcttctta 6468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 48760467 - 48760427
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtact 163  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  48760467 aacttctacggtacactcacaaaatgaggtataccggtact 48760427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 52441116 - 52441168
Alignment:
Q  159 gtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||| |||||| |||||| |||||| ||||||||||||||||||| |||||    
T  52441116 gtacttttgcttcataattttataaattaacgatcattttttatgtaataaat 52441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 7435919 - 7435876
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtact 163  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  7435919 ggaacttctacggtacacctcacaaattgaggtgtatcggtact 7435876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 14152688 - 14152767
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||| ||||||||||| |||| || |||||||  |||||  |||||| |||||| ||| || |||||||    
T  14152688 ggaacttctacggtatactcacaaaataaggtataccggtactcttgcttaataattttataaattaacaataatttttt 14152767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 40054993 - 40054942
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  40054993 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 40054942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 43916347 - 43916398
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  43916347 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 43916398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 32912212 - 32912290
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    ||||||||||| |||||| ||||||| |||||||||||||||||    |||| ||| || |||||| ||||||||||||    
T  32912212 ggaacttctacagtacacctcacaaattgaggtgtatcggtactctcacttcataaatttataaattaacgatcatttt 32912290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 39084715 - 39084788
Alignment:
Q  125 cttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||| ||||||| |||||||||||| ||| |||||||| ||| || |||||| || |||||||||    
T  39084715 cttctacggtacacctcacaaattgaggtgtatcgatac-tctgcttcataaatttataaattaatgatcatttt 39084788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 30263632 - 30263673
Alignment:
Q  170 tcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||||| || ||||||||||||||||||||||    
T  30263632 tcttaattttataaattaatgatcattttttatgtagtaaat 30263673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 30572705 - 30572673
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgt 154  Q
    |||||||||||||||| ||||||||||||||||    
T  30572705 gaacttctacggtacattcacaaaatgaggtgt 30572673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 2852103 - 2852013
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||    
T  2852103 ggaacttctacggtacactcacaaaatgaggtgtatcggtactcatgcttcttaattttataaatgaacgatcattttttatgtattaaat 2852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 33678563 - 33678473
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  33678563 ggaacttctatggtacactcacaaaatgaggtgtatcggtactcctgcttcttaattttataaatgaatgatcattttttatgtagtaaat 33678473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 40803724 - 40803636
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40803724 aacttctacggtgcactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 40803636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 14434819 - 14434909
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  14434819 ggaacttctactgtacactcacaaaatgaggtgtatcggtactcctgtttcttaattttataaatgaacgatcattttatatgtagtaaat 14434909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 9604433 - 9604522
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||| |||||    
T  9604433 gaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaat 9604522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 211
Target Start/End: Original strand, 28318347 - 28318438
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  28318347 aggaacttctacggtacacttataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaatgataattttttacgtagtaaat 28318438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 42597475 - 42597564
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  42597475 ggaacttctacggtacactcacaaaatgaggtgtactgatact-ctgcttcttaattttataaatgaacgattattttttatgtagtaaat 42597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 35370410 - 35370489
Alignment:
Q  132 ggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| ||||||||||||||||||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  35370410 ggtaaactcacaaaatgaggtgtaccggtactcttgcttcttaattttataaatgaacgatcattttttatgtagtaaat 35370489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 9910042 - 9910130
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| |||||||||||||||||||||||| || |||| || ||| ||||||  ||||||||||||||||||||||||||||||||    
T  9910042 aacttctatggtacactcacaaaatgaggtgtaccgatactccttctttttaattctataaatgaacgatcattttttatgtagtaaat 9910130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 5360119 - 5360041
Alignment:
Q  133 gtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  5360119 gtacactcacaaaatgaggtgtatcggtactcctgcttcataattttataaattaacgataattttttatgtaataaat 5360041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 39816505 - 39816584
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  |||||| |||||| |||||| |||||||||||||    
T  39816505 aggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttt 39816584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 9913198 - 9913279
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||| ||||||||||||| ||||||| |||||||||||||| |||||||||| |||| ||||||||||||||||    
T  9913198 tacgatacactcataaaatgaggtgtaccggtactcctgcttcttaattttataaatgaactatca-tttttatgtagtaaat 9913279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 8258779 - 8258710
Alignment:
Q  143 aaaatgaggtgtatcgg-tacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8258779 aaaatgatgtgtatcgggtacttctgcttcttaattttataaatgaacgatcattatttatgtagtaaat 8258710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 13119202 - 13119126
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||||||||||    
T  13119202 aacttctacggtacacttacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttt 13119126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 34259943 - 34259855
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||| ||| ||||| |||||| || ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  34259943 aacttctacggtatactaacaaagtgaggtctaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 34259855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 6260423 - 6260333
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| ||||||||||||| |||||||  | |||| |||||| |||||| ||| ||| ||||||||||| |||||    
T  6260423 ggaacttctacggtacactcataaaatgaggtgtaccggtactcttccttcataattttataaataaactatctttttttatgtaataaat 6260333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 13127386 - 13127304
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||| ||||||||||||||||| |||||||  | |||| |||||| |||||| |||||| ||||||||||    
T  13127386 ggaacttctacggtacattcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgataattttttatg 13127304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 198
Target Start/End: Original strand, 40563115 - 40563193
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||||||| ||||||||||||| || ||||  |||||| |||||| |||||| ||||||||||||    
T  40563115 aggaacttctacggtacactcataaaatgaggtgtaccgatactcttgcttcataattttataaattaacgatcatttt 40563193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 42486606 - 42486696
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||||||||||||| ||||||||| |||||||  | |||| |||||| |||||| || |||||||||||||||| |||||    
T  42486606 ggaatttctacggtacactcacaaagtgaggtgtaccggtactcatacttcataattttataaattaaagatcattttttatgtaataaat 42486696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 702356 - 702292
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaa 184  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||| |||||    
T  702356 aggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaa 702292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 30753458 - 30753538
Alignment:
Q  131 cggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| |||||||  | |||  |||||| |||||| ||||||||||||||||||| |||||    
T  30753458 cggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcattttttatgtaataaat 30753538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 33210773 - 33210693
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||| ||||||   | |||| |||||| |||||| |||||| ||||||||||    
T  33210773 aacttctacggtacactcacaaaatgaggtgtaccggtaccctttcttcataattttataaattaacgataattttttatg 33210693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 3024163 - 3024242
Alignment:
Q  132 ggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||  ||||| | |||||||| ||||||| ||||||||||| ||||||||||||| |||||||||||| |||||    
T  3024163 ggtacactcgtaaaataaagtgtatcgatacttctacttcttaattttataaatgaacgataattttttatgtaataaat 3024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 36427906 - 36427985
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  ||||   |||||| |||||| ||||||||||||||    
T  36427906 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgctcaataattttataaattaacgatcatttttt 36427985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 3426183 - 3426105
Alignment:
Q  133 gtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| || ||||  |||||| |||||| |||||| |||||| |||||||||||| |||||    
T  3426183 gtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaat 3426105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 29960272 - 29960190
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||  | |||| |||||| |||||| ||||||| |||||||||    
T  29960272 ggaacttttacggtacactcataaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcgttttttatg 29960190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 479676 - 479759
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||||||||||||||||||||||| |||||||||  ||||||   ||||| |||||| | |||| ||||||||||||| |||||    
T  479676 gaacttctacggtacactcacaaagtgaggtgtactggtactctcgcttcataattttacaaattaacgatcatttttcatgta 479759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 9630465 - 9630387
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttta 201  Q
    |||||||||||||||||| |||||| |||||||| | ||||  | |||| |||||| |||||| |||||||||||||||    
T  9630465 aacttctacggtacactctcaaaataaggtgtattgatactctttcttcataattttataaattaacgatcatttttta 9630387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 39979749 - 39979671
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| ||||||| ||||||||| || |||||||||||| ||| || |||||| || |||||||||    
T  39979749 ggaacttctacggtacacctcacaaattgaggtgtaccgatacttctgcttcataaatttataaattaatgatcatttt 39979671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 40756542 - 40756593
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  40756542 ggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgcttc 40756593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 5204618 - 5204668
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgctt 170  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  5204618 ggaacttctacggtacacctcacaaattgaggtgtatcggtactcctgctt 5204668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 31588640 - 31588562
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||| || ||| ||| || |||||| || |||||||||    
T  31588640 ggaacttctacggtacacctcacaaattgaggtgtaccggtacttttgtttcataaatttataaattaatgatcatttt 31588562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 4367194 - 4367115
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaa-tgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||| |||  || || |||| | ||||||||||||    
T  4367194 ggaacttctacggtacacctcacaaaagtgaggtgtatcggtactcctggttcaaaaatttataatttaacgatcatttt 4367115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 29744308 - 29744229
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||||||| ||||||||||||||||| | | ||||| |||||||| ||||||  || || |||||| ||| |||||||||    
T  29744308 aggaacttatacggtacactcacaaattaaagtgtaccggtacttttgcttcaaaaatttataaattaactatcattttt 29744229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 39939034 - 39939085
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  39939034 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 39939085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 27980179 - 27980101
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    ||||||||||||||| ||  ||||| |||| |||| |||||||  || ||| |||||| |||||| |||||||||||||    
T  27980179 ggaacttctacggtaaacctacaaagtgagatgtagcggtactcttgtttcataattttataaattaacgatcattttt 27980101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 30753422 - 30753463
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtac 162  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  30753422 ggaatttctacggtacactcacaaaatgagatgtaccggtac 30753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 4617104 - 4617020
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||| ||||||||||||||||| |||| |||| || ||||   ||||| | |||| | |||| ||||||||||||| |||||    
T  4617104 ggaacttttacggtacactcacaaagtgagatgtaccgatactctcgcttcatgattttacaaattaacgatcatttttcatgta 4617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 30349409 - 30349319
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  30349409 ggaacttctacggtacactcacaaaatgaagtgtatcggtacttctgcttcttaattttataaatgaacgataattttttatgtaataaat 30349319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 53289231 - 53289321
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  53289231 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcatttttgatgtagtaaat 53289321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 7352169 - 7352257
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  7352169 aacttctgcggtacactcacaaaatgagatgtatcggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 7352257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 46507354 - 46507451
Alignment:
Q  113 atattagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||||||||||    
T  46507354 atattaggagaacttctacggtacactcacaaaatgaggtgtatcggtac-tctgttttttaattttataaatgaacgatcattttttatgtagtaaat 46507451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 41217459 - 41217368
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaatga 213  Q
    |||||||||||||||||||||||||| |||||||| | |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  41217459 gaacttctacggtacactcacaaaataaggtgtattgatactcctgcttcttaattttataaatgaatgatcattttttatgtagtaaatga 41217368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 1021379 - 1021297
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||    
T  1021379 ggaacttctacgatacactcacaaaatgaggtgtatcggtactcctgcttcctaattttataaatgaacgatcattttttatg 1021297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 26850331 - 26850241
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||| | ||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  26850331 ggaacttctatggtacacttataaaatgaggtgtatcggtactcctacttcttaattttataaatgaacgatcattttttatgtagtaaat 26850241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 35501195 - 35501105
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||  |||||| |||||||||||||||||||||||||    
T  35501195 ggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattctataaataaacgatcattttttatgtagtaaat 35501105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 26012203 - 26012288
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  26012203 ttctacggtacactcacaaaatgaggtgtatcaatactcctgcttcttaattttataaatgaacgattattttttatgtagtaaat 26012288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 50258201 - 50258116
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||| || |||||||||||||||||||||||||||||    
T  50258201 ttctacggtacactcacaaaatgaggtgtatcggtattcatgcttcttaattttatgaatgaacgatcattttttatgtagtaaat 50258116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 39987347 - 39987442
Alignment:
Q  116 ttagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| ||||||||||||| ||||||| ||||||||||||| ||||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  39987347 ttaggggaacttctacgggacactcataaaatgaggtgtaccggtactcctgtttcttaattttataaatgaatgatcattttttatgtagtaaat 39987442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 1129130 - 1129220
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  1129130 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 1129220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 40478163 - 40478073
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  40478163 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 40478073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 54428901 - 54428810
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| ||||||||| ||||||||||||| || |||| ||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  54428901 aggaacttctactgtacactcataaaatgaggtgtaccgatactcctgtttcttaattttataaatgaacgataattttttatgtagtaaat 54428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 29388696 - 29388786
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||| ||||||||||||||||||| | ||||| || ||||||||||| ||||||||| |||||||||||||||| |||||    
T  29388696 ggaacttctacggtatactcacaaaatgaggtgtaccagtactcctacttcttaattttataaatgaaagatcattttttatgtattaaat 29388786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 44379415 - 44379505
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| ||||| ||||||||||||| |||||    
T  44379415 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaat 44379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 34825660 - 34825583
Alignment:
Q  134 tacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| || ||||||||||||||||||    
T  34825660 tacactcacaaaatgaggtgtaccggtacttctgcttcttaattttataaataaacaataattttttatgtagtaaat 34825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 26884974 - 26885064
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||| |||||||||| |||||||  | | ||||||||| |||||| |||||| ||||||||||||||||||    
T  26884974 ggaacttctacggtacactcacaagatgaggtgtaccggtactcttacatcttaattttataaattaacgattattttttatgtagtaaat 26885064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 35137845 - 35137755
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||  ||||| ||||||| || |||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  35137845 ggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgcttcttaattttataaatgaacgataattttttatgtaataaat 35137755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 37520703 - 37520785
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||  | |||| |||||| |||||| |||||||||||||||||    
T  37520703 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatg 37520785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 42621849 - 42621939
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| | |||||  |||||| |||||| |||||| ||||| ||||||||||||| |||||    
T  42621849 ggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaacgaccattttttatgtaataaat 42621939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 47746233 - 47746144
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||||||||||||| || ||||  |||||| |||||| |||||| |||||| |||||||||||| |||||    
T  47746233 gaacttctacggtacactcacaaaatgaggtgtaccgatactcttgcttcataattttataaattaacgataattttttatgtaataaat 47746144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 9507302 - 9507218
Alignment:
Q  127 tctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||| ||||||    
T  9507302 tctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaacgatcattttttatgttgtaaat 9507218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 9515277 - 9515193
Alignment:
Q  127 tctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||| ||||||    
T  9515277 tctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaattaacgatcattttttatgttgtaaat 9515193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 23456861 - 23456773
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| ||||||||| ||||||| || |||| |||||| |||||| |||||| |||||||||||| |||||    
T  23456861 aacttctacggtacactcacaaagtgaggtgtaccggtactccttcttcataattttataaattaacgataattttttatgtaataaat 23456773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 37127807 - 37127894
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||| ||||||||||||| | ||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  37127807 aacttctacggtacactcataaaatgaggtgtaccagtact-ctgcttcataattttataaattaacgatcattttttatgtaataaat 37127894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 25834635 - 25834545
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| ||| |||| |||| ||||||| ||||||| |||||  |||||| ||||||||||||||||||| |||||    
T  25834635 ggaacttctacggtacactcataaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcattttttatgtaataaat 25834545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 36220811 - 36220721
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| || ||||| |||||| |||||| |||||| ||| || |||||||||||| |||||    
T  36220811 ggaacttctacggtacactcacaaagtgaggtgtaccgatacttttgcttcataattttataaattaacaattattttttatgtaataaat 36220721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 13756324 - 13756397
Alignment:
Q  139 tcacaaaat-gaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| |||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||    
T  13756324 tcacaaaattgaggtgtatcggtactccttattcttaattttataaatgaacgatcattttttatgtagtaaat 13756397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 43745348 - 43745437
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||| | ||||| ||||||||| ||||||||||||||| |||||| |||||| || || ||||||||||||| |||||    
T  43745348 gaacttctacggtacatttacaaagtgaggtgtaccggtacttctgcttcataattttataaattaaagaccattttttatgtaataaat 43745437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 7862848 - 7862760
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| |||||| ||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  7862848 aacttctatggtacattcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaat 7862760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 15997228 - 15997136
Alignment:
Q  119 gaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| || |||||||||| |||||||   || ||||||||| |||||| |||||| ||||||||| ||||||||    
T  15997228 gaggaacttctacggtacactcataagatgaggtgtaccggtactctcgcatcttaattttataaattaacgattattttttatatagtaaat 15997136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 25482252 - 25482342
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||||||| |||| |||||||||| ||||| |  ||| ||||||||| |||||| || ||||||||||||||||||||||    
T  25482252 ggaatttctacggtacacttacaagatgaggtgtaccggtattcttgcatcttaattttataaattaatgatcattttttatgtagtaaat 25482342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 26456955 - 26457044
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| |||||||| ||| ||||||| | ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  26456955 ggaacttctacg-tacactcataaagtgaggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 26457044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 42479090 - 42479000
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||  || ||| |||||| |||||| |||||| |||||||||||| |||||    
T  42479090 ggaacttctacggtacattcacaaaataaggtgtaccggtactcttgtttcataattttataaattaacgataattttttatgtaataaat 42479000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 44653576 - 44653494
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |  ||| |||||| |||||| |||||| ||||||||||    
T  44653576 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaacgattattttttatg 44653494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 51344777 - 51344688
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||| ||||||| |||||| || ||| ||||||||||||||||||| |||||    
T  51344777 ggaacttctacggtacacttacaaagtaaggtgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaat 51344688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 54788712 - 54788630
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||| ||||||||| | ||||| ||||||  |||||| |||||| ||||||||||||||||||| |||||    
T  54788712 tacggtacactcacaaagtgaggtgtaccagtactcctgctttataatttaataaattaacgatcattttttatgtaataaat 54788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 41982389 - 41982300
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||| |||||||||||||||||  | |||  |||||| ||||||  ||||| |||||||||||| |||||    
T  41982389 gaacttctacggtacactcacaaagtgaggtgtatcggtactcttactttataattttataaattgacgataattttttatgtaataaat 41982300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 40474241 - 40474151
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| |||||||||| ||| ||||||||| ||||||| ||||||| |||||| || ||| | ||||||||||||||||| |||||    
T  40474241 aggaacttctatggtacactcataaagtgaggtgtaccggtactcctgcttcataattttat-aattagcgatcattttttatgtaataaat 40474151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 4817077 - 4817155
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||| |||||||||||||||||||||||||||||| |||||||  | |||  |||||| |||||| |||||||||||||    
T  4817077 ggaatttctacggtacactcacaaaatgaggtgtaccggtactcttactttataattttataaattaacgatcattttt 4817155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 27045097 - 27045023
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattt 197  Q
    ||||||||||||||||||||||||||||||| | ||||||| || || | |||||| |||||| |||||||||||    
T  27045097 aacttctacggtacactcacaaaatgaggtgcaccggtactccttctacataattttataaattaacgatcattt 27045023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 51756096 - 51756178
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||||||||||| | ||| ||||||||||||||||||   |||| |||||| |||||| ||||||||||||| |||||    
T  51756096 aacttctacggtacacttataaagtgaggtgtatcggtactttcacttcataattttataaattaacgatcatttttcatgta 51756178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 48825425 - 48825490
Alignment:
Q  146 atgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  48825425 atgaggtgtaccggtactcttgcatcttaattttataaattaacgatcattttttatgtagtaaat 48825490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 32637032 - 32636948
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||| |||||||||||||||||||| ||||||||| || ||||   | ||| |||||||| |||| |||||||||||||||||||    
T  32637032 ggaatttctacggtacactcacaaagtgaggtgtaccgatactctcgtttcataatttcacaaattaacgatcattttttatgta 32636948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39678486 - 39678430
Alignment:
Q  147 tgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||    
T  39678486 tgaggtgtatcggtacttctgctttataattttataaattaacgatcattttttatg 39678430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 50412080 - 50412153
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||||| |||||| || ||| ||||||||||    
T  50412080 tacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaatgat-attttttatg 50412153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 36099568 - 36099480
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| | |||||||||||| || ||| ||  | |||||||||||| |||||| || ||| ||||||||||||||||||| |||||    
T  36099568 aacttctaagttacactcacaaagtgtggtataaagatacttctgcttcataattttatgaattaacgatcattttttatgtaataaat 36099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 40784495 - 40784557
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataa 183  Q
    ||||||||||| ||||||||| |||||||| |||||||||| || |||||| |||||| ||||    
T  40784495 ggaacttctacagtacactcataaaatgagatgtatcggtatttttgcttcataattttataa 40784557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 44522384 - 44522314
Alignment:
Q  133 gtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||| || ||||  | |||| |||||| |||| | |||||||||||||||||    
T  44522384 gtacactcacaaaatgaggtgtaccgatactctttcttcataattttataatttaacgatcattttttatg 44522314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 24170331 - 24170258
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||||||||||| ||||||| |||||| ||||| |||| ||||||| |||||| |||||| || ||| ||||||    
T  24170331 ttctacggtacattcacaaagtgaggtatatcgatactcctgcttcataattttataaattaaggattattttt 24170258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Original strand, 35375512 - 35375589
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattt 197  Q
    |||||||||||||||||| ||||||| |||||||||||||||||  || ||| ||| || |||||| ||| |||||||    
T  35375512 ggaacttctacggtacacctcacaaattgaggtgtatcggtactcttgattcataaatttataaattaacaatcattt 35375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 40021485 - 40021401
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||||||||| ||||| |||||||| |||| ||||||||||||   ||||| | |||| | |||| ||||||||||||| |||||    
T  40021485 ggaacttctatggtacgctcacaaagtgagatgtatcggtactctcgcttcatgattttacaaattaacgatcatttttcatgta 40021401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 45538676 - 45538736
Alignment:
Q  151 gtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| ||||||| ||| ||| |||||| |||||| ||||||||||||||||||| |||||    
T  45538676 gtgtaccggtactcctgtttcataattttataaattaacgatcattttttatgtaataaat 45538736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 32121900 - 32121951
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  32121900 ggaacttctacggtacacctcacaaagtgaggtgtaccggtactcctgcttc 32121951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 43903478 - 43903435
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtact 163  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  43903478 ggaacttctacggtacacctcacaaattgaggtgtatcggtact 43903435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 8966336 - 8966286
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||||||| ||| | ||||||| ||||||| |||||||    
T  8966336 ggaacttctacggtacactcataaattaaggtgtaccggtactcctgcttc 8966286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 29491993 - 29491939
Alignment:
Q  157 cggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| ||| |||||| |||||| |||||||||||||||| || |||||    
T  29491993 cggtacttctgtttcataattttataaattaacgatcattttttatataataaat 29491939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 29698323 - 29698373
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgctt 170  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  29698323 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgctt 29698373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 29806414 - 29806372
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtact 163  Q
    |||||||||||||||||||| |||| ||||||||| |||||||    
T  29806414 ggaacttctacggtacactcgcaaattgaggtgtaccggtact 29806372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 35389300 - 35389374
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||| | ||||||||||||||| || ||||  | |||| |||||| |||||| ||||||| |||||||||    
T  35389300 tacggtacatttacaaaatgaggtgtaccgatactctttcttcataattttataaattaacgatcgttttttatg 35389374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 50029754 - 50029802
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||| |||||||||| ||| | ||||||||||||||| |||||||    
T  50029754 aacttctatggtacactcataaactaaggtgtatcggtactcctgcttc 50029802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 9122157 - 9122247
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  9122157 ggaacttctacggtacactcacaaaataaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttttatgtaataaat 9122247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 25331456 - 25331546
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  25331456 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaactatcattttttatgtagtaaat 25331546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 32602304 - 32602394
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  32602304 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgataattttttatgtagtaaat 32602394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 43439996 - 43440086
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43439996 ggaacttctacggcacactcacaaaatgaggtgtaccgatacttctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 43440086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 7673296 - 7673386
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| || |||||||||||||||||    
T  7673296 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacggtcgttttttatgtagtaaat 7673386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 17451285 - 17451373
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  17451285 aacttctacggtacactcacaaaataaggtgtaccggtactcctgcttcttaattttataagtgaacgatcattttttatgtagtaaat 17451373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 9589519 - 9589429
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||  |||||||||||||||||||||||||| |||||    
T  9589519 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctacttcttaattatataaatgaacgatcattttttatgtattaaat 9589429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 21404199 - 21404289
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| || |||| || ||||||||||  |||||||||||||||||||||||||| |||||    
T  21404199 ggaacttctacggtacactcacaaaatgaggtgtaccgatactcctacttcttaattatataaatgaacgatcattttttatgtattaaat 21404289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 32401080 - 32401170
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||||||| |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  32401080 ggaacttctacggtacactcacaagatgaggtgtaccggtactcttgcatcttaattttataaatcaacgatcattttttatgtagtaaat 32401170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 4740630 - 4740540
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||  ||||| ||||||| ||||||||||||||||||    
T  4740630 ggaacttctacagtacactcacaaaatgaggtgtattgatactcctgcttcttaattatataaacgaacgataattttttatgtagtaaat 4740540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 33493878 - 33493787
Alignment:
Q  120 aggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| |||||||||||||||| |||||||||| | |||||  ||| ||||||||| |||||| |||||||||||||||||||||||||    
T  33493878 aggaacttttacggtacactcacaagatgaggtgtaccagtactcttgcatcttaattttataaattaacgatcattttttatgtagtaaat 33493787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 18998728 - 18998806
Alignment:
Q  133 gtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||| ||||| ||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18998728 gtacactcaaaaaattaggtgcatcggtacttttgcttcttaattttatacatgaacgatcattttttatgtagtaaat 18998806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 6945746 - 6945661
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagt 207  Q
    |||||||||||||||||||| || |||||||||| |||||||  ||| ||||||||| |||||| |||||||||||||||||||||    
T  6945746 gaacttctacggtacactcataagatgaggtgtaccggtactcttgcatcttaattttataaattaacgatcattttttatgtagt 6945661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 4297892 - 4297988
Alignment:
Q  115 attagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||| |||| ||||||||||||||||||| ||||||| || |||||||  ||| ||||||||| |||||| ||| |||||||||||||||||||||    
T  4297892 attaggggaatttctacggtacactcacaagatgaggtataccggtactcttgcgtcttaattttataaattaacaatcattttttatgtagtaaat 4297988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 35895312 - 35895402
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||| ||||||||||||| ||| ||||||||| ||||||| ||||||| |||||| |||||| ||||| ||||||||||||| |||||    
T  35895312 ggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaat 35895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 4048984 - 4049068
Alignment:
Q  126 ttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| | | |||||||||||| | | || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4048984 ttctacggtacatttataaaatgaggtgtgttgata-ttctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 4049068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 1580248 - 1580338
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||| |||||||||||||||||||| ||||||||| |||||||  |||||| |||||| || ||| |||||| |||||||||||| |||||    
T  1580248 ggaatttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttatgaattaacgataattttttatgtaataaat 1580338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 30981283 - 30981209
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||| ||||||||||||||||| | ||||| |||||| |||||| || ||||||||||||||    
T  30981283 tacggtacactcacaaagtgaggtgtatcggtactcccgcttcataattttataaattaatgatcattttttatg 30981209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 40495852 - 40495770
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||| ||||||||||||||||||||| | || |||||||| |||||||||| |||||| ||| ||||| |||||||    
T  40495852 ggaacttctactgtacactcacaaaatgaggtgcaccgatacttctgtttcttaattttataaattaacaatcatattttatg 40495770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 45157918 - 45157837
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    |||||||||||||||||||||||||||||||||| || ||||  | |||| ||| || |||||| |||||||||||||||||    
T  45157918 gaacttctacggtacactcacaaaatgaggtgtaccgatactctttcttcataagtttataaattaacgatcattttttatg 45157837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 40946764 - 40946853
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||||||| ||| || | |||| |||||||  | |||| |||||| |||||| ||||||||||||||||||| |||||    
T  40946764 gaacttctacggtacactcataaagtgggttgtaccggtactattacttcataattttataaattaacgatcattttttatgtaataaat 40946853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 44143228 - 44143296
Alignment:
Q  142 caaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||| ||||||| ||| |||||| ||| |||||| |||||||||||||||||||||||||    
T  44143228 caaaatgaggtgtaccggtactcctgtttcttatttt-ataaataaacgatcattttttatgtagtaaat 44143296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 14840199 - 14840113
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| |||||||| ||||||| || ||| | |||| |||||| ||||||| |||||||||| || ||||||||||||||||||    
T  14840199 aacttctacg-tacactcataaaatgaagtatattgatactcctgctttttaattttataaatgaactat-attttttatgtagtaaat 14840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 12002750 - 12002704
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttct 166  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12002750 ggaacttctacggtacacctcacaaattgaggtgtatcggtacttct 12002704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 38073107 - 38073185
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||  | |||| ||| || |||||| ||||||||||||    
T  38073107 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcttacttcataaatttataaattaacgatcatttt 38073185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 36754339 - 36754371
Alignment:
Q  123 aacttctacggtacactcacaaaatgaggtgta 155  Q
    |||||||||||||||||||||||||||||||||    
T  36754339 aacttctacggtacactcacaaaatgaggtgta 36754371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 39620925 - 39620862
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaa 184  Q
    ||||||||||||||||||| ||||| | ||||||| || |||||||||||  |||||| |||||    
T  39620925 ggaacttctacggtacactaacaaagtaaggtgtaccgatacttctgctttataattttataaa 39620862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 41555432 - 41555483
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  41555432 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 41555483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 27401135 - 27401053
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||| || |||||| | |||||||||||||||  | ||||  | |||| |||||| |||||| |||||||||||||||||    
T  27401135 ggaacttttatggtacatttacaaaatgaggtgtactgatactctttcttcataattttataaattaacgatcattttttatg 27401053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 33494350 - 33494261
Alignment:
Q  112 tatattagaggaacttctacggtacactcacaaaatgagg--tgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||||||  ||||||||||||||||||||  ||| |||||  ||||||||||||  |||||||| | || |||||| |||||||| ||||    
T  33494350 tatattatgggaacttctacggtacactcgtaaattgaggtatgtatcggtactcttgcttctttaatttataaattaacgatcaatttt 33494261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 37781867 - 37781945
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| ||||||| |||||||||   |||||  | |||| ||| || |||||||||||||||||||    
T  37781867 ggaacttctacggtacacctcacaaattgaggtgtacatgtactcttccttcataaatttataaatgaacgatcatttt 37781945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 3261311 - 3261227
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    ||||||||||||||||| ||| ||| |||| |||| |||||||   ||||| | |||| | |||| ||||||||||||| |||||    
T  3261311 ggaacttctacggtacattcataaagtgagatgtaccggtactctcgcttcatgattttacaaattaacgatcatttttcatgta 3261227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 34188945 - 34188889
Alignment:
Q  116 ttagaggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||| ||||||||||||||||| || ||||| ||||||||| ||||||| |||||||    
T  34188945 ttaggggaacttctacggtacaccttacaaattgaggtgtaccggtactcctgcttc 34188889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 33574242 - 33574324
Alignment:
Q  129 tacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  33574242 tacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaat 33574324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 23416902 - 23416812
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  23416902 ggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaatgatctttttttttgtagtaaat 23416812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 9662171 - 9662073
Alignment:
Q  112 tatattagaggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||  ||| ||||||||| |||||| || ||||||||||||||||||||||    
T  9662171 tatattag-ggaacttctacggtacactcataagatgaggtgtatcggtactcttgcatcttaattttataaattaatgatcattttttatgtagtaaat 9662073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 11763174 - 11763264
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||| | ||||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  11763174 ggaacttctacggtacactcacagagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaat 11763264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 33574758 - 33574668
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  |||||| |||||| |||||| ||||||||||||||||||| |||||    
T  33574758 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaat 33574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 33574936 - 33574846
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| |||||||  |||||| |||||| |||||| ||||||||||||||||||| |||||    
T  33574936 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttttatgtaataaat 33574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 9687180 - 9687099
Alignment:
Q  122 gaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||||| ||||  | ||||||||||| |||||| |||||||||||||||||    
T  9687180 gaacttctacggtacactcacaaaatgaggtgtatcgatactctttcttcttaattttataaattaacgatcattttttatg 9687099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 4509834 - 4509745
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||| |||||||||||| |||||    
T  4509834 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgat-attttttatgtaataaat 4509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 18772265 - 18772183
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| || |||| |||||| |||||| |||||||||||||||||    
T  18772265 ggaacttctacggtacactcacaaagtgaagtgtatcggtactcctacttcataattttataaattaacgatcattttttatg 18772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 242886 - 242976
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||| || |||||||||| || ||||  ||| ||||||||| |||||| |||||||||||||||||| ||||||    
T  242886 ggaacttctacggtacactcataagatgaggtgtaccgatactcttgcatcttaattttataaattaacgatcattttttatgttgtaaat 242976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 211
Target Start/End: Original strand, 3141041 - 3141131
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||  ||| | ||||||| |||||||||||| |||||    
T  3141041 ggaacttctatggtacactcacaaaatgaggtgtattgatactcctgcttcttaattatatatacgaacgataattttttatgtaataaat 3141131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 1245214 - 1245135
Alignment:
Q  132 ggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||||||| ||||||| || ||||  | ||||||||||| ||||||||||||| ||||||||||||||||||    
T  1245214 ggtacactcacaaaataaggtgtaccgatactcttccttcttaattttataaatgaacgataattttttatgtagtaaat 1245135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Original strand, 8549564 - 8549646
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||||||||||||||||||||||||||| || ||||  |  ||| |||||| |||||| |||||||||||||||||    
T  8549564 ggaacttctacggtacactcacaaaatgaggtgtaccgatactcttttttcataattttataaattaacgatcattttttatg 8549646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 23069105 - 23069042
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaa 184  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||    
T  23069105 ggaacttttacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaa 23069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 1339778 - 1339701
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttt 198  Q
    |||||||||||||||||| ||||||| ||||||||| | |||||||||||||  ||||| |||| | ||||||||||||    
T  1339778 ggaacttctacggtacacgtcacaaattgaggtgtaccagtacttctgcttcaaaattt-ataatttaacgatcatttt 1339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 14779308 - 14779227
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatg 203  Q
    ||||||||||| ||||||||||||||||||| ||| |||||||  |  ||| |||||| |||||| |||||| ||||||||||    
T  14779308 ggaacttctacagtacactcacaaaatgaggggtaccggtactcttttttcataattttataaattaacgat-attttttatg 14779227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 4576790 - 4576711
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcatttttt 200  Q
    ||||||||||  ||| ||||||||||||||||||| |||||||  |  ||| |||||| |||||| |||||| |||||||    
T  4576790 ggaacttctattgtagactcacaaaatgaggtgtaccggtactcttttttcataattttataaattaacgattatttttt 4576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 10966029 - 10965978
Alignment:
Q  121 ggaacttctacggtaca-ctcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||| |||||||    
T  10966029 ggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgcttc 10965978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 24249211 - 24249160
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttc 171  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| |||||||    
T  24249211 ggaacttctacggtacaccttacaaattgaggtgtatcggtactcctgcttc 24249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 31644411 - 31644453
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtact 163  Q
    ||||||||||||||||||||  ||| |||||||||||||||||    
T  31644411 ggaacttctacggtacactcgtaaattgaggtgtatcggtact 31644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 6295779 - 6295719
Alignment:
Q  125 cttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaat 185  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| ||| || ||||||    
T  6295779 cttctacggtacacctcacaaattgaggtgtatcggtac-tctgcttcataaatttataaat 6295719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 6302589 - 6302529
Alignment:
Q  125 cttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaat 185  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| ||| || ||||||    
T  6302589 cttctacggtacacctcacaaattgaggtgtatcggtac-tctgcttcataaatttataaat 6302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 238 - 148
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||    
T  238 ggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaat 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 7609 - 7519
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaat 211  Q
    |||||||||||| |||||| ||||||||| |||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||    
T  7609 ggaacttctacgatacactaacaaaatgaagtgtatcggtactcttccttcttaattttataaatgaacgatcattttttatgtagtaaat 7519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 90 - 1
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgtagtaaa 210  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||| | |||||||||| ||||    
T  90 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataactttttatgtaataaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 17066 - 16987
Alignment:
Q  121 ggaacttctacggtacac-tcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttt 199  Q
    |||||||||||||||||| ||||||| ||||||||| || |||| || |||| ||| || || ||| |||||||||||||    
T  17066 ggaacttctacggtacacctcacaaattgaggtgtaccgatactcctacttcataaatttatcaattaacgatcattttt 16987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 3033 - 3113
Alignment:
Q  121 ggaacttctacggtacactcacaaaatgaggtgtatcggtacttctgcttcttaatttcataaatgaacgatcattttttatgta 205  Q
    |||| |||||||||||||||| ||| ||||||    ||||||| || |||| |||||| |||| |||||||||||||||||||||    
T  3033 ggaatttctacggtacactcataaagtgaggtc---cggtactcctacttcataattttataa-tgaacgatcattttttatgta 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University