View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7639_high_5 (Length: 425)
Name: NF7639_high_5
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7639_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 17 - 416
Target Start/End: Original strand, 40985569 - 40985968
Alignment:
| Q |
17 |
attattcagtgacgggttgaggagataaggatggttgcagcactgtaaacaacaacacatgtgcaatgatcattatgaagtcctgttgacaattcattta |
116 |
Q |
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| T |
40985569 |
attattcagtgacgggttgaggagataaggatggttgcagcactgtaaacaacaacacatgtgcaatgatcattatgaagccctattgacaattcattta |
40985668 |
T |
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| Q |
117 |
gagctattgcttttataaaagttgagtaagtattaatcatgaaaggaaggtttaactaaaaattggttgacagccaaacttattcagcttatctgcttct |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
40985669 |
gagctattgcttttataaaagttgagtaagtattaatcatgaaaggaaggtttaactaaaaattggtggacagccaaacttattcagcttatctgcttct |
40985768 |
T |
|
| Q |
217 |
tatcgtgcctaccttccttgttgagatgacaagctcacggagggcaccaacagagtcagacctttggccagagcataacaacattgagtttgaaagcagc |
316 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40985769 |
tatcgtgcctaccttctttgttgagatgacaagctcacggagggcaccaacagagtcagacctttggccagagcataacaacattgagtttgaaagcagc |
40985868 |
T |
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| Q |
317 |
attgaacaatactgcttaagctgcatactggaaaactgagcaggaacccaatactcgataaacctgctggagacagaattgcatttcaatacagtatatt |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40985869 |
attgaacaatactgcttaagctgcatactggaaaactgagcaggaacccaatactcgataaacctgctggagacagaattgcatttcaatacagtatatt |
40985968 |
T |
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