View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7639_low_4 (Length: 441)

Name: NF7639_low_4
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7639_low_4
NF7639_low_4
[»] chr1 (53 HSPs)
chr1 (19-338)||(799810-800129)
chr1 (182-415)||(39927469-39927703)
chr1 (259-377)||(48365718-48365836)
chr1 (365-429)||(799749-799813)
chr1 (259-377)||(28035149-28035267)
chr1 (280-377)||(7312058-7312155)
chr1 (306-415)||(39987446-39987555)
chr1 (297-377)||(5324511-5324591)
chr1 (297-377)||(9172538-9172618)
chr1 (297-377)||(9180520-9180600)
chr1 (259-371)||(51868604-51868716)
chr1 (182-376)||(18569264-18569459)
chr1 (306-377)||(50272093-50272164)
chr1 (259-357)||(9687177-9687275)
chr1 (259-377)||(35584571-35584689)
chr1 (309-377)||(7342782-7342850)
chr1 (297-377)||(9919437-9919517)
chr1 (259-371)||(19715854-19715966)
chr1 (282-358)||(34519165-34519241)
chr1 (297-369)||(50166060-50166132)
chr1 (297-376)||(25406238-25406317)
chr1 (306-377)||(50148427-50148498)
chr1 (259-376)||(3871418-3871535)
chr1 (306-380)||(40880963-40881036)
chr1 (306-380)||(45426016-45426090)
chr1 (306-371)||(30879132-30879197)
chr1 (259-371)||(31836817-31836929)
chr1 (259-371)||(33291377-33291489)
chr1 (261-349)||(33817162-33817249)
chr1 (261-349)||(33876632-33876719)
chr1 (297-377)||(45805781-45805861)
chr1 (297-377)||(51871911-51871991)
chr1 (306-377)||(5701316-5701387)
chr1 (282-369)||(27872771-27872858)
chr1 (308-377)||(7997848-7997917)
chr1 (340-424)||(13144736-13144820)
chr1 (340-424)||(21947542-21947626)
chr1 (340-424)||(44915723-44915807)
chr1 (309-429)||(48809137-48809257)
chr1 (309-368)||(16801360-16801419)
chr1 (239-334)||(31692495-31692589)
chr1 (340-423)||(35484316-35484399)
chr1 (259-377)||(11453945-11454063)
chr1 (313-371)||(20266366-20266424)
chr1 (303-349)||(38520512-38520558)
chr1 (297-335)||(44637469-44637507)
chr1 (306-355)||(30818326-30818375)
chr1 (340-425)||(41911889-41911974)
chr1 (307-335)||(12635207-12635235)
chr1 (297-377)||(14545566-14545645)
chr1 (340-376)||(24583034-24583070)
chr1 (340-420)||(32395082-32395162)
chr1 (340-376)||(44543356-44543392)
[»] chr8 (46 HSPs)
chr8 (280-429)||(35812696-35812844)
chr8 (283-380)||(42447977-42448074)
chr8 (259-415)||(43192261-43192417)
chr8 (306-377)||(23851447-23851518)
chr8 (259-377)||(2655883-2656001)
chr8 (259-377)||(4808977-4809095)
chr8 (259-377)||(11196902-11197019)
chr8 (259-377)||(11464184-11464302)
chr8 (306-371)||(9072778-9072843)
chr8 (308-377)||(32724434-32724503)
chr8 (304-377)||(43890077-43890150)
chr8 (297-377)||(29777270-29777350)
chr8 (297-377)||(33896133-33896213)
chr8 (282-365)||(17427181-17427264)
chr8 (306-380)||(9498549-9498623)
chr8 (259-377)||(44099887-44100005)
chr8 (259-371)||(14906882-14906994)
chr8 (303-371)||(16794349-16794417)
chr8 (340-424)||(31013530-31013614)
chr8 (271-371)||(33298880-33298980)
chr8 (306-377)||(9619310-9619381)
chr8 (341-420)||(24186587-24186666)
chr8 (306-357)||(27747086-27747137)
chr8 (306-377)||(28239893-28239964)
chr8 (307-377)||(17949296-17949366)
chr8 (340-377)||(7198164-7198201)
chr8 (340-424)||(28086734-28086819)
chr8 (306-371)||(34611864-34611929)
chr8 (259-335)||(5333417-5333493)
chr8 (309-365)||(17430831-17430887)
chr8 (340-424)||(20553163-20553247)
chr8 (340-424)||(37971366-37971450)
chr8 (306-377)||(11725741-11725811)
chr8 (303-369)||(15597128-15597194)
chr8 (282-331)||(16644592-16644642)
chr8 (307-357)||(19876272-19876321)
chr8 (340-422)||(20559668-20559750)
chr8 (340-422)||(20571230-20571312)
chr8 (282-355)||(35580493-35580566)
chr8 (344-424)||(3673528-3673608)
chr8 (340-376)||(15344391-15344427)
chr8 (340-376)||(15433456-15433492)
chr8 (340-376)||(15524760-15524796)
chr8 (340-376)||(29617244-29617280)
chr8 (340-376)||(39657537-39657573)
chr8 (340-423)||(40618996-40619079)
[»] chr4 (58 HSPs)
chr4 (259-415)||(35964890-35965046)
chr4 (306-376)||(20569320-20569390)
chr4 (182-371)||(46991089-46991279)
chr4 (259-377)||(49410241-49410359)
chr4 (259-371)||(9283929-9284041)
chr4 (259-369)||(868180-868290)
chr4 (259-377)||(10389707-10389825)
chr4 (307-421)||(23100745-23100859)
chr4 (307-380)||(44947478-44947551)
chr4 (308-425)||(49072668-49072785)
chr4 (308-428)||(26123329-26123449)
chr4 (306-377)||(4643923-4643994)
chr4 (280-371)||(14183841-14183932)
chr4 (306-377)||(25273948-25274019)
chr4 (259-374)||(31381628-31381743)
chr4 (256-418)||(43353465-43353632)
chr4 (306-377)||(47417727-47417798)
chr4 (309-371)||(9528836-9528898)
chr4 (259-377)||(43153967-43154085)
chr4 (344-425)||(54021965-54022046)
chr4 (306-378)||(43444458-43444530)
chr4 (306-377)||(53616603-53616674)
chr4 (307-369)||(36184599-36184661)
chr4 (340-425)||(4142675-4142760)
chr4 (259-371)||(1531926-1532038)
chr4 (307-371)||(10359506-10359570)
chr4 (340-424)||(22611284-22611368)
chr4 (340-424)||(24098991-24099075)
chr4 (340-424)||(32766615-32766699)
chr4 (182-377)||(38706663-38706859)
chr4 (340-424)||(53811129-53811213)
chr4 (306-357)||(3336129-3336180)
chr4 (306-377)||(29965700-29965771)
chr4 (306-377)||(34024391-34024461)
chr4 (306-377)||(50766465-50766536)
chr4 (259-377)||(6972828-6972946)
chr4 (307-377)||(12265520-12265590)
chr4 (339-424)||(36161811-36161896)
chr4 (308-357)||(52097889-52097938)
chr4 (182-371)||(2624438-2624627)
chr4 (311-371)||(45228000-45228060)
chr4 (297-377)||(51318041-51318121)
chr4 (297-361)||(56194657-56194721)
chr4 (311-358)||(1008319-1008366)
chr4 (259-334)||(18048889-18048964)
chr4 (320-415)||(27593743-27593837)
chr4 (306-377)||(37188548-37188618)
chr4 (311-377)||(2115541-2115607)
chr4 (259-381)||(8009310-8009432)
chr4 (340-377)||(36204350-36204387)
chr4 (352-429)||(48257551-48257628)
chr4 (259-371)||(18138872-18138984)
chr4 (340-376)||(33332541-33332577)
chr4 (340-424)||(33921155-33921239)
chr4 (259-335)||(35261209-35261285)
chr4 (340-376)||(47320384-47320420)
chr4 (259-371)||(49126085-49126197)
chr4 (313-377)||(49680610-49680674)
[»] chr3 (54 HSPs)
chr3 (259-415)||(36734607-36734763)
chr3 (306-377)||(30648672-30648743)
chr3 (259-377)||(46934645-46934763)
chr3 (259-371)||(42719520-42719632)
chr3 (306-377)||(14464560-14464631)
chr3 (282-371)||(31794097-31794186)
chr3 (257-369)||(21488092-21488204)
chr3 (340-424)||(23799834-23799918)
chr3 (306-377)||(3848872-3848943)
chr3 (306-377)||(25162486-25162557)
chr3 (306-377)||(39917351-39917422)
chr3 (306-377)||(51202207-51202278)
chr3 (259-377)||(32607472-32607590)
chr3 (340-424)||(26275743-26275827)
chr3 (306-377)||(12116148-12116219)
chr3 (306-377)||(22803072-22803143)
chr3 (306-369)||(25631487-25631550)
chr3 (306-377)||(35499151-35499222)
chr3 (306-377)||(38854989-38855060)
chr3 (306-377)||(50611371-50611442)
chr3 (309-371)||(38440540-38440602)
chr3 (340-424)||(21313116-21313200)
chr3 (315-374)||(2342522-2342581)
chr3 (306-377)||(17237855-17237926)
chr3 (308-371)||(36906174-36906237)
chr3 (306-377)||(44907352-44907423)
chr3 (297-391)||(25849851-25849945)
chr3 (259-377)||(29503465-29503582)
chr3 (259-377)||(49552177-49552295)
chr3 (340-425)||(7448837-7448922)
chr3 (340-425)||(7456979-7457064)
chr3 (308-377)||(46178621-46178690)
chr3 (308-348)||(6910691-6910731)
chr3 (339-391)||(35175483-35175535)
chr3 (340-424)||(48650658-48650742)
chr3 (340-424)||(52923041-52923125)
chr3 (340-424)||(53508306-53508390)
chr3 (306-377)||(4178615-4178686)
chr3 (259-334)||(4396362-4396437)
chr3 (340-423)||(12050573-12050656)
chr3 (341-424)||(19619795-19619877)
chr3 (236-335)||(35175366-35175465)
chr3 (182-237)||(46980015-46980070)
chr3 (307-356)||(6902943-6902992)
chr3 (306-335)||(14859522-14859551)
chr3 (339-376)||(14859569-14859606)
chr3 (339-376)||(29922136-29922173)
chr3 (339-376)||(29971289-29971326)
chr3 (283-335)||(4821816-4821868)
chr3 (340-424)||(21431693-21431777)
chr3 (271-391)||(37169246-37169365)
chr3 (359-391)||(50460436-50460468)
chr3 (340-376)||(51923807-51923843)
chr3 (340-376)||(53807830-53807866)
[»] chr7 (40 HSPs)
chr7 (282-377)||(1448783-1448878)
chr7 (259-379)||(42408368-42408488)
chr7 (308-371)||(17222959-17223022)
chr7 (259-377)||(42311286-42311404)
chr7 (282-371)||(14627838-14627927)
chr7 (259-380)||(46339060-46339181)
chr7 (297-377)||(22927823-22927903)
chr7 (306-385)||(6002074-6002153)
chr7 (282-377)||(34773740-34773835)
chr7 (271-377)||(433644-433750)
chr7 (297-371)||(23085565-23085639)
chr7 (282-368)||(23786604-23786690)
chr7 (259-377)||(42067015-42067132)
chr7 (308-377)||(19560053-19560122)
chr7 (259-356)||(35667206-35667303)
chr7 (309-377)||(26492421-26492489)
chr7 (306-377)||(6558930-6559001)
chr7 (308-415)||(35261353-35261460)
chr7 (306-377)||(35496128-35496199)
chr7 (306-377)||(46822068-46822139)
chr7 (282-356)||(17611154-17611228)
chr7 (297-371)||(20116626-20116700)
chr7 (259-377)||(31235745-31235863)
chr7 (306-368)||(32684721-32684783)
chr7 (311-420)||(43369682-43369791)
chr7 (307-424)||(46244176-46244292)
chr7 (340-424)||(19404681-19404765)
chr7 (259-355)||(32521902-32521998)
chr7 (306-377)||(2843194-2843265)
chr7 (340-424)||(5348516-5348600)
chr7 (340-424)||(19296953-19297037)
chr7 (309-349)||(26583770-26583810)
chr7 (297-377)||(45198986-45199065)
chr7 (221-364)||(969443-969589)
chr7 (340-423)||(12141233-12141316)
chr7 (340-423)||(34899532-34899615)
chr7 (325-377)||(1485210-1485262)
chr7 (297-377)||(20083382-20083461)
chr7 (297-377)||(21266435-21266514)
chr7 (297-377)||(48207945-48208024)
[»] chr2 (62 HSPs)
chr2 (259-391)||(9418426-9418554)
chr2 (282-417)||(18113902-18114037)
chr2 (259-377)||(20047035-20047153)
chr2 (259-384)||(22421745-22421870)
chr2 (282-415)||(37614040-37614173)
chr2 (259-379)||(7015662-7015782)
chr2 (306-377)||(3269064-3269135)
chr2 (306-377)||(3269623-3269694)
chr2 (306-377)||(3270182-3270253)
chr2 (212-369)||(13141446-13141605)
chr2 (282-377)||(26025363-26025458)
chr2 (259-377)||(8308181-8308298)
chr2 (309-423)||(36323915-36324028)
chr2 (259-371)||(9986301-9986413)
chr2 (306-370)||(34599044-34599108)
chr2 (306-377)||(84134-84204)
chr2 (282-377)||(459227-459322)
chr2 (306-377)||(6173689-6173760)
chr2 (306-377)||(36234065-36234136)
chr2 (297-376)||(41431076-41431155)
chr2 (259-377)||(30420688-30420806)
chr2 (271-377)||(32679063-32679169)
chr2 (259-377)||(32913251-32913368)
chr2 (259-416)||(44881656-44881813)
chr2 (307-371)||(8805924-8805988)
chr2 (320-371)||(25087108-25087159)
chr2 (259-377)||(2808425-2808543)
chr2 (306-376)||(27249105-27249175)
chr2 (339-423)||(7448337-7448421)
chr2 (340-424)||(17994655-17994739)
chr2 (340-424)||(31128705-31128789)
chr2 (340-424)||(31788547-31788631)
chr2 (306-377)||(21570361-21570431)
chr2 (306-381)||(27477206-27477280)
chr2 (309-376)||(27949486-27949553)
chr2 (309-371)||(3240946-3241008)
chr2 (307-369)||(3725238-3725300)
chr2 (315-377)||(40626010-40626072)
chr2 (347-424)||(36943046-36943123)
chr2 (340-424)||(4778844-4778928)
chr2 (340-420)||(19062281-19062361)
chr2 (271-375)||(24587730-24587833)
chr2 (340-424)||(25508993-25509077)
chr2 (340-424)||(29279495-29279579)
chr2 (307-375)||(39285249-39285317)
chr2 (285-336)||(4904172-4904223)
chr2 (309-376)||(8971582-8971648)
chr2 (342-424)||(11985158-11985240)
chr2 (320-375)||(17261607-17261662)
chr2 (340-419)||(29173650-29173729)
chr2 (306-377)||(45128261-45128332)
chr2 (297-335)||(4264506-4264544)
chr2 (297-415)||(39641773-39641891)
chr2 (306-355)||(31580564-31580613)
chr2 (312-369)||(40659893-40659950)
chr2 (352-424)||(7646581-7646653)
chr2 (307-355)||(9374531-9374579)
chr2 (340-376)||(10237189-10237225)
chr2 (340-376)||(17249120-17249156)
chr2 (340-392)||(30399992-30400044)
chr2 (340-376)||(32448592-32448628)
chr2 (340-424)||(37876531-37876615)
[»] chr5 (37 HSPs)
chr5 (295-425)||(19100542-19100672)
chr5 (259-392)||(7612996-7613129)
chr5 (259-380)||(43261769-43261890)
chr5 (271-371)||(3271361-3271461)
chr5 (315-423)||(11192434-11192542)
chr5 (306-377)||(27266812-27266883)
chr5 (306-377)||(34881773-34881844)
chr5 (306-376)||(2057792-2057862)
chr5 (297-371)||(4954038-4954112)
chr5 (306-376)||(19259766-19259836)
chr5 (259-377)||(19280898-19281016)
chr5 (307-377)||(41184393-41184463)
chr5 (340-425)||(15571566-15571651)
chr5 (308-381)||(42886535-42886607)
chr5 (297-377)||(16981336-16981416)
chr5 (284-371)||(35475297-35475383)
chr5 (282-377)||(42579919-42580014)
chr5 (308-377)||(26578309-26578378)
chr5 (306-371)||(30371781-30371846)
chr5 (297-377)||(7150288-7150368)
chr5 (282-349)||(18677446-18677513)
chr5 (297-371)||(27576309-27576383)
chr5 (296-377)||(7241828-7241909)
chr5 (296-377)||(7247004-7247085)
chr5 (297-424)||(13468648-13468772)
chr5 (340-424)||(6216978-6217062)
chr5 (311-375)||(11768062-11768126)
chr5 (340-424)||(13007309-13007393)
chr5 (307-415)||(15570965-15571072)
chr5 (297-369)||(20257656-20257728)
chr5 (259-429)||(28097161-28097328)
chr5 (259-371)||(30298216-30298327)
chr5 (340-424)||(38597877-38597961)
chr5 (307-369)||(19983316-19983378)
chr5 (340-376)||(8088184-8088220)
chr5 (340-424)||(10722841-10722925)
chr5 (340-420)||(34945473-34945553)
[»] scaffold0136 (1 HSPs)
scaffold0136 (310-424)||(34686-34800)
[»] scaffold0311 (1 HSPs)
scaffold0311 (307-377)||(8745-8815)
[»] chr6 (40 HSPs)
chr6 (259-376)||(8496973-8497090)
chr6 (306-371)||(12652997-12653062)
chr6 (297-377)||(16419202-16419282)
chr6 (183-342)||(25337499-25337659)
chr6 (297-380)||(35001634-35001717)
chr6 (271-377)||(33110629-33110735)
chr6 (307-371)||(4984526-4984590)
chr6 (304-380)||(8028068-8028144)
chr6 (306-377)||(7881055-7881126)
chr6 (306-377)||(25064289-25064360)
chr6 (259-377)||(33543575-33543691)
chr6 (271-376)||(4468576-4468681)
chr6 (297-377)||(17237239-17237318)
chr6 (340-424)||(23128700-23128784)
chr6 (306-377)||(7875997-7876068)
chr6 (306-377)||(12165892-12165963)
chr6 (306-377)||(23947271-23947342)
chr6 (306-377)||(33740531-33740602)
chr6 (307-377)||(10228733-10228803)
chr6 (339-377)||(30493613-30493651)
chr6 (340-424)||(606286-606370)
chr6 (297-425)||(1704055-1704183)
chr6 (340-376)||(26588444-26588480)
chr6 (340-424)||(29255370-29255454)
chr6 (340-424)||(33053092-33053176)
chr6 (306-365)||(4351961-4352020)
chr6 (306-369)||(8196368-8196431)
chr6 (338-429)||(25398648-25398739)
chr6 (340-379)||(27097611-27097650)
chr6 (306-377)||(28635074-28635145)
chr6 (306-356)||(20980034-20980084)
chr6 (340-377)||(1933663-1933700)
chr6 (340-377)||(12170550-12170587)
chr6 (269-429)||(3688749-3688908)
chr6 (309-377)||(4088516-4088584)
chr6 (340-392)||(25092560-25092612)
chr6 (259-335)||(26588499-26588575)
chr6 (259-335)||(30493519-30493595)
chr6 (339-379)||(32191699-32191739)
chr6 (348-424)||(34018650-34018726)
[»] scaffold0426 (1 HSPs)
scaffold0426 (297-376)||(6349-6428)
[»] scaffold0022 (1 HSPs)
scaffold0022 (306-371)||(83397-83462)
[»] scaffold0146 (1 HSPs)
scaffold0146 (306-377)||(16273-16344)
[»] scaffold0002 (1 HSPs)
scaffold0002 (282-349)||(453961-454028)
[»] scaffold0495 (1 HSPs)
scaffold0495 (307-377)||(5452-5522)
[»] scaffold0014 (1 HSPs)
scaffold0014 (307-369)||(201334-201395)
[»] scaffold0017 (1 HSPs)
scaffold0017 (340-424)||(32671-32755)
[»] scaffold0347 (1 HSPs)
scaffold0347 (339-377)||(6110-6148)


Alignment Details
Target: chr1 (Bit Score: 244; Significance: 1e-135; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 19 - 338
Target Start/End: Complemental strand, 800129 - 799810
Alignment:
Q  19 acataaagcgacagcccaattgtttcataagtaaatttgatatatctccgataagtccatcctagttttatctccttacattctctctcccattttcttc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  800129 acataaagcgacagcccaattgtttcataagtaaatttgatatatcgccgataagtccatcctagttttatctccttacattctctcttccattttcttc 800030  T
Q  119 atttacgtggtgatttttagtcannnnnnnnacttgaaattatcttccttcgcacttttattttatttcaacctaaataaatgatttgtatatagattta 218  Q
    |||||||||||||||||||||||        |||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||  | ||| |||||    
T  800029 atttacgtggtgatttttagtcaatttttttactcaaaattatcttccgtcgcacttttattttatttcaacataaataaatgattttcacatatattta 799930  T
Q  219 gattttttacttcgtgattcgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttg 318  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  799929 gattttttacttcgtgattcgtcgtctcattgtgtcattatgttgtttgtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttg 799830  T
Q  319 gttcatattgaaagatcgtt 338  Q
    ||||||||||||||||||||    
T  799829 gttcatattgaaagatcgtt 799810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 182 - 415
Target Start/End: Complemental strand, 39927703 - 39927469
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtag 280  Q
    |||||||| |||||||||| ||||  | |||||| |||||||||| |||||||||| |||| || || ||||    | ||||||| ||| |||||||| |    
T  39927703 tatttcaatctaaataaataattttcagatagatctagatttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtgg 39927604  T
Q  281 tgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
     ||||||||| ||   ||||| || ||||||||||||| ||||||||||||||||| |||| |||| ||  |||||||||||||||||||| ||||||||    
T  39927603 cgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatcggttatccaataaaaaatttggatgtcaacgttgcagatccgaag 39927504  T
Q  381 atatgagtatttcacttacttcaattttatcatat 415  Q
    | ||||||||| || | |||| |||||||||||||    
T  39927503 acatgagtattccaatcactttaattttatcatat 39927469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 48365836 - 48365718
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||||||||||| |  ||||||||| |||||||||| |  ||||||||||||| ||||||||||| ||||| |||||||||||| |||||| |    
T  48365836 tgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcatattgaaggatcgattattcaatcaaagatttgaa 48365737  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  48365736 cgtcaacgttgcagatccg 48365718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 365 - 429
Target Start/End: Complemental strand, 799813 - 799749
Alignment:
Q  365 cgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  799813 cgttgcaaatccggagacatgagtatttcacttacttcaattttatcatattatttgtagatatt 799749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 28035149 - 28035267
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||   |||||  ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||     
T  28035149 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggg 28035248  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||| ||||| |||||    
T  28035249 cgtcaacattgcagatccg 28035267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 7312155 - 7312058
Alignment:
Q  280 gtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| |||  ||||| || ||||||||||||| ||||||||||||||||| | |||||| ||| |||||||| |||||| ||||| |||||    
T  7312155 gtgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgataattcaaacaaagatttggacgtcaacattgcagatccg 7312058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 415
Target Start/End: Original strand, 39987446 - 39987555
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaat 405  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| || ||||  |||||||||||| ||||| ||  ||| ||||| |  | |||| |||    
T  39987446 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattccggtcactttaat 39987545  T
Q  406 tttatcatat 415  Q
    ||||||||||    
T  39987546 tttatcatat 39987555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 5324591 - 5324511
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||| |||||||||||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  5324591 gtctttttgcggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 5324511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 9172538 - 9172618
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  9172538 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 9172618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 9180520 - 9180600
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  9180520 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 9180600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 51868716 - 51868604
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||  || | ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| ||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaagatttgga 51868617  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  51868616 cgtcaacgttgca 51868604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 182 - 376
Target Start/End: Complemental strand, 18569459 - 18569264
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtag 280  Q
    |||||||| |||||||| ||||||  | |||||| ||| |||| | |||||||||| |||| | ||| ||||    | ||||||| ||||||||||   |    
T  18569459 tatttcaatctaaataagtgattttcacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcgtcatcttgtccgg 18569360  T
Q  281 tgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||| || ||   ||||| || ||||||||||||  ||||||||||||||||| |||||||||  | ||||||| ||||||||||||| ||||    
T  18569359 tgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaaagatcgattattcaattgaagatttgggtgtcaacgttgcagatcc 18569264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 50272164 - 50272093
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| |||||||||||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  50272164 cggtgttcatttgattcatattgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 50272093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 9687275 - 9687177
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgg 357  Q
    ||||||| |||||||||||  | ||||||||| ||    |||| || ||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  9687275 tgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgg 9687177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 35584689 - 35584571
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||||| || |||||||||  ||||||     
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttggg 35584590  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  35584589 cgtcaacgttgcagatccg 35584571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 7342782 - 7342850
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  7342782 tgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 7342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 9919437 - 9919517
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||| | ||||| ||||||||||||    
T  9919437 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgaacgtcaatgttgcaaatccg 9919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 19715966 - 19715854
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||||| || || |||||| |||||||     
T  19715966 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttggg 19715867  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  19715866 cgtcaacgttgca 19715854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 34519165 - 34519241
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||||| || | ||||| ||  |||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  34519165 gttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttgga 34519241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 50166132 - 50166060
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| ||||||||||    
T  50166132 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttg 50166060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 25406317 - 25406238
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| ||||| || |||||||||||| ||||    
T  25406317 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgttgcagatcc 25406238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 50148427 - 50148498
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||| |||  |||||||||||| |||||    
T  50148427 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatgtgggcgtcaacgttgcagatccg 50148498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 3871418 - 3871535
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatatt-gaaagatcgtttattcaatcaatgatttgg 357  Q
    ||||||| ||| ||||||| || ||||||||| ||   ||||| || |||||||| |||| || ||||| ||||||||| |||||||||||| |||||||    
T  3871418 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttatatttgaaagatcgattattcaatcaaagatttgg 3871516  T
Q  358 atgtcaacgttgcaaatcc 376  Q
     ||||||||||||| ||||    
T  3871517 gtgtcaacgttgcagatcc 3871535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 40881036 - 40880963
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    ||||||||||||| |||||||| ||| |||| |||||||||||| |||||||  |||||||||||| ||||||||    
T  40881036 cggtgttcatttgattcatattaaaa-atcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaag 40880963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 45426090 - 45426016
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||  |||||   |||||||||||| ||||||||    
T  45426090 cggtgttcatttgattcatatcgaaagatcgattattcaatcaaaaatttgagcgtcaacgttgcagatccgaag 45426016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 30879132 - 30879197
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||||| ||||||||||||||||| || |||||||||  ||||||  ||||||||||||    
T  30879132 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgca 30879197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 31836817 - 31836929
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  ||||||||||| ||   |||||  | ||||||||||||| |||||||||||| |||| || ||||||||| ||||||      
T  31836817 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattgttcaatcaaagatttgag 31836916  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  31836917 cgtcaacgttgca 31836929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 33291489 - 33291377
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  ||||||||||| |||  ||| |  | ||||||||||||| |||||||||||||||   | |||||||||| |||||||     
T  33291489 tgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttggg 33291390  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  33291389 cgtcaacgttgca 33291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 33817249 - 33817162
Alignment:
Q  261 ttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    ||||||||| |||| ||  | ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||    
T  33817249 ttgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgattattcaatcaa 33817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 349
Target Start/End: Complemental strand, 33876719 - 33876632
Alignment:
Q  261 ttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    ||||||||| |||| ||  | ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||    
T  33876719 ttgtttgtcgtcttatgctgcgttgtttgatttctcgtcttttt-cggtgttcatttgattcatattgaaagatcgattattcaatcaa 33876632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 45805861 - 45805781
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  |||  |||||||||||| |||||||||||| |||||| | |||||||||||| |||||    
T  45805861 gtcttcttgcggtgttcatttcattccgattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgcagatccg 45805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 51871911 - 51871991
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| ||||||||||||  ||||| | |||||||||||| |||||    
T  51871911 gtcttcttgcggtgttcattttattcttattgaaagatcgattattcaatcaaatatttgaacgtcaacgttgcagatccg 51871991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 5701316 - 5701387
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| |||||||||||| |||| || ||||||||| |||||||   ||||||||||| |||||    
T  5701316 cggtgttcatttgattcatattgaaatatcgattgttcaatcaaagatttgggcatcaacgttgcagatccg 5701387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 369
Target Start/End: Original strand, 27872771 - 27872858
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||||||| |||||||||| || ||||||||||||  |||| |||||| ||||| ||||||||| || ||||||   ||||||||||    
T  27872771 gttgtttgattttttgtcttcttgcggtgttcatttaattcaaattgaaggatcgattattcaattaaagatttgagcgtcaacgttg 27872858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 7997848 - 7997917
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| |||||||||||| |||| || ||||| ||| |||||||  |||||||||||| |||||    
T  7997848 gtgttcatttgattcatattgaaatatcgattgttcaaccaaagatttgggcgtcaacgttgcagatccg 7997917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 13144820 - 13144736
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||  ||||| ||| |||   |||||||||||| | ||||  ||||||||||| |||||||||    
T  13144820 attcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtag 13144736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 21947626 - 21947542
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||| ||||||  | |||| | ||||||||||||||||||||    
T  21947626 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtag 21947542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 44915723 - 44915807
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  ||||| |||||| ||||| |   |||||||||||  || |||  |||||||||||||||||||||    
T  44915723 attcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttcttagattttatcatattatttgtag 44915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 429
Target Start/End: Complemental strand, 48809257 - 48809137
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatttt 408  Q
    |||| ||||| ||| ||||| ||||||||| ||||||| |||||| | |   ||||| || || ||| ||||  |||||||||||| | |||| ||||||    
T  48809257 tgtttatttgattcctattgcaagatcgttcattcaataaatgatctaggcatcaacattacatatctgaaggcatgagtatttcagtcactttaatttt 48809158  T
Q  409 atcatattatttgtagatatt 429  Q
    |||||||||||| ||| ||||    
T  48809157 atcatattatttataggtatt 48809137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 16801360 - 16801419
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgtt 368  Q
    ||||||||| |||| ||||||||||||  ||||||||||||||||||  | |||||||||    
T  16801360 tgttcattttgttcgtattgaaagatcagttattcaatcaatgattttaacgtcaacgtt 16801419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 31692589 - 31692495
Alignment:
Q  239 gtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagat 334  Q
    ||||||||| |||| ||||  |||||||||| |||||||  ||||||||||| |||   |||| || ||||||||  |||||||||||||||||||    
T  31692589 gtcgtctgagtgtgacattgcgttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttc-gttggttcatattgaaagat 31692495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 35484399 - 35484316
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    |||||| |||||||||||| |||||||||||| |||||||   ||| |||||||  | | |||  |||||||||||||||||||    
T  35484399 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgta 35484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 11453945 - 11454063
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || | ||||||| ||   ||||| || |||| |||||||| ||||| |||||||| || |||||||||||| ||||||      
T  11453945 tgttgttcgtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatttgattcatcttgaaagagcgattattcaatcaaagatttgag 11454044  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||| ||||| |||||    
T  11454045 cgtcaacattgcagatccg 11454063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 20266366 - 20266424
Alignment:
Q  313 catttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||| ||||||||||||||||| || ||||||||| |||||||   |||||||||||    
T  20266366 catttgattcatattgaaagatcgattgttcaatcaaagatttgggcatcaacgttgca 20266424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 38520558 - 38520512
Alignment:
Q  303 ttacggtgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    ||||||||||||| || ||||||||||||||||| ||||| ||||||    
T  38520558 ttacggtgttcatctgattcatattgaaagatcgattattaaatcaa 38520512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 44637469 - 44637507
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  44637469 gtcttgttacggtgttcatttgattcatattgaaagatc 44637507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 30818375 - 30818326
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgattt 355  Q
    ||||||||||||| ||| ||| ||||||||| |||||||||||| |||||    
T  30818375 cggtgttcatttgattcttatcgaaagatcgattattcaatcaaagattt 30818326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 41911889 - 41911974
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||||||||||  ||  |||||||||| |||||| |||  |||||||||| || | | ||  ||||||||||||||||||||||    
T  41911889 attcaatcaatgacgtgtgtgtcaacgttacaaatctgaatgtatgagtattacaatcatttttattttatcatattatttgtaga 41911974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 335
Target Start/End: Original strand, 12635207 - 12635235
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatc 335  Q
    |||||||||||||||||||||||||||||    
T  12635207 ggtgttcatttggttcatattgaaagatc 12635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 14545566 - 14545645
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || |||||||||| || || || ||||| ||||| |||||||||||| |||||||  |||||||||||| |||||    
T  14545566 gtcttcttgcggtgttcatctgatttattttgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 14545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 24583034 - 24583070
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  24583034 attcaatcaatgatttggacgtcaacgttgcagatcc 24583070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 32395082 - 32395162
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattattt 420  Q
    |||||| |||||||||||| |||||||||||| || ||||   ||| |||||||  | |||| | ||||||||||||||||    
T  32395082 attcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaagttttatcatattattt 32395162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 44543356 - 44543392
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  44543356 attcaatcaatgatttggacgtcaacgttgcagatcc 44543392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 9e-34; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 280 - 429
Target Start/End: Original strand, 35812696 - 35812844
Alignment:
Q  280 gtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaa 379  Q
    ||||||||||| | |||||||| ||||| |||| ||||| ||||||||||||||||| ||||||||| ||||||||||| || ||||||| | || | ||    
T  35812696 gtgttgtttgattgtttgtcttgttacg-tgtttatttgattcatattgaaagatcggttattcaattaatgatttggacgttaacgttgaagatacaaa 35812794  T
Q  380 gatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
    || |||||||||||| | |||| |||||||||||||||||||||||||||    
T  35812795 gacatgagtatttcagtgactttaattttatcatattatttgtagatatt 35812844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 380
Target Start/End: Complemental strand, 42448074 - 42447977
Alignment:
Q  283 ttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    |||||||| |||| |||||  | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||  |||||||||||| ||||||||    
T  42448074 ttgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaag 42447977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 43192417 - 43192261
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  ||||| ||  |||||||||||| ||||| ||||||||||| |||||| |||||  ||||||     
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgattattcgatcaaatatttggg 43192318  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatat 415  Q
    ||||||||||||| ||||| ||| |||| |||| |  | |||| |||||||||||||    
T  43192317 tgtcaacgttgcagatccggagacatgaatattccgatcactttaattttatcatat 43192261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 23851518 - 23851447
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||| |||||||||||| |||||    
T  23851518 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacgttgcagatccg 23851447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 2655883 - 2656001
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||||| || ||||||||| |||||||     
T  2655883 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggg 2655982  T
Q  359 tgtcaacgttgcaaatccg 377  Q
    ||||||||| ||| |||||    
T  2655983 tgtcaacgtcgcagatccg 2656001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 4808977 - 4809095
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||||| || ||||||||| |||||||     
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaggatttggg 4809076  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  4809077 cgtcaacgttgcagatccg 4809095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 11196902 - 11197019
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  ||||| || ||||||||||||| ||||||||| ||||||| |||||||||||| |||||||     
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattg-aagatcgattattcaatcaacgatttggg 11197000  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  11197001 cgtcaacgttgcagatccg 11197019  T

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Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 11464184 - 11464302
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| || | |||||  | ||||||||||||| ||||||||||||||||| || ||||||||| |||||||     
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggg 11464283  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  11464284 cgtcaacgttgcagatccg 11464302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 9072778 - 9072843
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  9072778 cggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggatgtcaacgttgca 9072843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 32724503 - 32724434
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| |||||||||||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  32724503 gtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 32724434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 377
Target Start/End: Complemental strand, 43890150 - 43890077
Alignment:
Q  304 tacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||||| ||||| ||||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  43890150 tacggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 43890077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 29777270 - 29777350
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||| ||||| |||||    
T  29777270 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacattgcagatccg 29777350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 33896133 - 33896213
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  |||  |||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  33896133 gtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 33896213  T

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Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 365
Target Start/End: Complemental strand, 17427264 - 17427181
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaac 365  Q
    ||||||| | ||||||||||  |||| |||||||||| ||| |||||||||||| |  ||||||||||||||||||| ||||||    
T  17427264 gttgtttaattttttgtcttgctacgatgttcatttgcttcttattgaaagatcatcaattcaatcaatgatttggacgtcaac 17427181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 380
Target Start/End: Complemental strand, 9498623 - 9498549
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    ||||||||||||| |||||||| |||||||| || ||||||||| |||||||| | |||||||| | ||||||||    
T  9498623 cggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttggacgacaacgttgtagatccgaag 9498549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 44100005 - 44099887
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||   ||||| || ||||||||||||| ||||||||||||||||  |||||||||||| || ||||     
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagagttggg 44099906  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     || ||||||||| |||||    
T  44099905 cgtgaacgttgcagatccg 44099887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 14906994 - 14906882
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||||||| |||||||  | ||||||||| ||   |||||  | || |||||||||| ||| |||| |||||||| || |||||||||||||||||     
T  14906994 tgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaagatcgattgttcaatcaatgatttggg 14906895  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  14906894 cgtcaacgttgca 14906882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 371
Target Start/End: Original strand, 16794349 - 16794417
Alignment:
Q  303 ttacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||| || ||| |  |||||||||||    
T  16794349 ttacggtgttcatttgattcatattgaaagatcaattattcaatcaaagaattgaacatcaacgttgca 16794417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 31013614 - 31013530
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||||||||| || || |   ||| |||||||| | |||| | ||||||||||||||||||||    
T  31013614 attcaatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtag 31013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 371
Target Start/End: Original strand, 33298880 - 33298980
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    |||||||| ||||||||||| || | |||||  | ||||||||||||| ||||||| ||||||  | ||||||||| || |||||||  |||||||||||    
T  33298880 tcttgtgtggtgttgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgc 33298979  T
Q  371 a 371  Q
    |    
T  33298980 a 33298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 9619381 - 9619310
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || || |||||| |||||||  |||||| ||||| |||||    
T  9619381 cggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaactttgcagatccg 9619310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 420
Target Start/End: Complemental strand, 24186666 - 24186587
Alignment:
Q  341 ttcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattattt 420  Q
    |||||||||| ||||||  |||||||||||| |||||||   ||| |||||||| | |||| ||||||||||||||||||    
T  24186666 ttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattattt 24186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 27747137 - 27747086
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgg 357  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| |||||||    
T  27747137 cggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgg 27747086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 28239893 - 28239964
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||  |||||||||||| ||||||   |||||||||||| |||||    
T  28239893 cggtgttcatttgattaatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccg 28239964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 17949296 - 17949366
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||  ||||||||||||||||| |||||||||||  |||||||  ||||||||| || |||||    
T  17949296 ggtgttcattttattcatattgaaagatcgattattcaatcagagatttgggcgtcaacgttccagatccg 17949366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 7198201 - 7198164
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7198201 attcaatcaatgatttggatgtcaacgttgcagatccg 7198164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 28086819 - 28086734
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttca-attttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||||||||| ||||| | | ||  |||||||| | | || | |||||||||||||||||||||    
T  28086819 attcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatattatttgtag 28086734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 34611864 - 34611929
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||||| |||||||||||||||   | |||||||||| |||||||  ||||||||||||    
T  34611864 cggtgttcatttgattcatattgaaagataagtaattcaatcaaagatttgggcgtcaacgttgca 34611929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 5333417 - 5333493
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    ||||||| ||| |||||||  ||||||||||| |||  ||||| || |||||||| |||||||| ||||||||||||    
T  5333417 tgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 17430887 - 17430831
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaac 365  Q
    |||||||||| ||| |||||||||||| |  ||| ||||||||||||||||||||||    
T  17430887 tgttcatttgcttcttattgaaagatcatcaattgaatcaatgatttggatgtcaac 17430831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 20553247 - 20553163
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | ||||   ||||||||||||||||||||    
T  20553247 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtag 20553163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 37971366 - 37971450
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| | | |||||||||||  | ||||   |||||||| |||||||||||    
T  37971366 attcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtag 37971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 11725741 - 11725811
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||| || ||||||||||| ||||| ||||||||| || |||||||  |||||||||||| |||||    
T  11725741 cggtgttcatctgattcatattgaa-gatcgattattcaattaaagatttgggcgtcaacgttgcagatccg 11725811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 369
Target Start/End: Complemental strand, 15597194 - 15597128
Alignment:
Q  303 ttacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    |||||||||||||||| |||||||| || ||||| |||||||||| | ||||||   ||||||||||    
T  15597194 ttacggtgttcatttgattcatattaaacgatcggttattcaatcgaagatttgagcgtcaacgttg 15597128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 16644592 - 16644642
Alignment:
Q  282 gttgtttgaattt-ttgtcttattacggtgttcatttggttcatattgaaa 331  Q
    ||||||||| ||| ||||||| || ||||||||||||||||||||||||||    
T  16644592 gttgtttgattttattgtcttgttgcggtgttcatttggttcatattgaaa 16644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 19876272 - 19876321
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgg 357  Q
    |||||||||||| ||||||||| ||||||| |||||||||||| |||||||    
T  19876272 ggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgg 19876321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 20559750 - 20559668
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgt 422  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | ||||   ||||||||||||||||||    
T  20559750 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgt 20559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 422
Target Start/End: Complemental strand, 20571312 - 20571230
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgt 422  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | ||||   ||||||||||||||||||    
T  20571312 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgt 20571230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 35580493 - 35580566
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgattt 355  Q
    ||||||||| |||  ||||| || |||||||| |||| ||||||||||| ||||| ||||||| |||| |||||    
T  35580493 gttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatcgattattcactcaaagattt 35580566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 424
Target Start/End: Original strand, 3673528 - 3673608
Alignment:
Q  344 aatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||| |||||  |||||||||||| ||||| |   |||||||||||| | |||| | ||| ||||||||||||||||    
T  3673528 aatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtag 3673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 15344391 - 15344427
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  15344391 attcaatcaatgatttggacgtcaacgttgcagatcc 15344427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 15433456 - 15433492
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  15433456 attcaatcaatgatttggacgtcaacgttgcagatcc 15433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 15524760 - 15524796
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  15524760 attcaatcaatgatttggacgtcaacgttgcagatcc 15524796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 29617280 - 29617244
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  29617280 attcaatcaatgatttggacgtcaacgttgcagatcc 29617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 39657537 - 39657573
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  39657537 attcaatcaatgatttggacgtcaacgttgcagatcc 39657573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 40619079 - 40618996
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc-gaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    ||||||||||| ||||||  |||||||||||| |||| ||||  ||||||||||| |  |||| |||||||||||||||| ||||    
T  40619079 attcaatcaataatttgggcgtcaacgttgcagatccagaagc-atgagtatttcgcagacttaaattttatcatattatgtgta 40618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 35965046 - 35964890
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| || ||||| | ||||||||| ||   ||||||||  |||||||||||| |||||||| |||||||| |||||||||||| ||||||||    
T  35965046 tgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttgga 35964947  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatat 415  Q
     |||||||||||| ||||| ||  |||||||||||| | |||| |||||||||||||    
T  35964946 cgtcaacgttgcagatccggaggcatgagtatttcagtcactttaattttatcatat 35964890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 376
Target Start/End: Original strand, 20569320 - 20569390
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||    
T  20569320 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggtgtcaacgttgcaaatcc 20569390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 371
Target Start/End: Complemental strand, 46991279 - 46991089
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgattc-gtcgtctgattgtgtcattatgttgtttgtcatcttgtgtag 280  Q
    |||||||| |||||| | ||||||  | |||||| |||||||||| |||| |||||  ||| ||||| ||||    | ||||||||||| |||| ||| |    
T  46991279 tatttcaatctaaatgagtgattttcacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgtcttctgtgg 46991180  T
Q  281 tgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
     ||||||||| ||    |||| || ||||||||||||| |||||||||||| |||| |||||||||||| ||||||| |||||||||||||    
T  46991179 cgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggtgtcaacgttgca 46991089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 49410241 - 49410359
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||||| |||||||||||| |||||||     
T  49410241 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggg 49410340  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  49410341 cgtcaacgttgcagatccg 49410359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 9283929 - 9284041
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||||||| |||||||| | ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||||| || ||||||||| |||||||     
T  9283929 tgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttggg 9284028  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  9284029 cgtcaacgttgca 9284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 868180 - 868290
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||   ||||| || ||||||||||||| ||||||||||||||||  |||||||||||| ||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgga 868279  T
Q  359 tgtcaacgttg 369  Q
    ||| |||||||    
T  868280 tgtgaacgttg 868290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 10389825 - 10389707
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  ||||| || ||||||||||||| |||||||||||| |||| |||||||||||| ||||||      
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaatatcgattattcaatcaacgatttgag 10389726  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  10389725 cgtcaacgttgcagatccg 10389707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 421
Target Start/End: Original strand, 23100745 - 23100859
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatt 406  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||||||  |||||| |||||| |||||| |  ||| |||||||  | | || ||||    
T  23100745 ggtgttcatttgattcatattgaaagatcaattattcaatcaatgatttgagtgtcaaagttgcagatccgatgtcatgggtatttcggtcaatttaatt 23100844  T
Q  407 ttatcatattatttg 421  Q
     ||||||||||||||    
T  23100845 gtatcatattatttg 23100859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 44947478 - 44947551
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    |||||||||||| || |||||||||||||| |||||||||||| |||||||  |||||||||||| ||||||||    
T  44947478 ggtgttcatttgattaatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccgaag 44947551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 425
Target Start/End: Complemental strand, 49072785 - 49072668
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattt 407  Q
    ||||||||||||||||||||||||||||   |||||||| |||||||| | ||||||||||||| ||||  ||| || | |||| || | ||||  ||||    
T  49072785 gtgttcatttggttcatattgaaagatcaactattcaattaatgatttaggtgtcaacgttgcatatcctgagacataaatattccaatcactttcattt 49072686  T
Q  408 tatcatattatttgtaga 425  Q
    |||| |||||||||||||    
T  49072685 tatcgtattatttgtaga 49072668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 428
Target Start/End: Original strand, 26123329 - 26123449
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattt 407  Q
    ||||||||||||||| |||||||||||||  | |||||| ||||| |||   ||||| |||||||||||| ||  |||||||||    | |||| |||||    
T  26123329 gtgttcatttggttcttattgaaagatcggctcttcaatgaatgacttgtgcgtcaatgttgcaaatccggaggcatgagtattattgtcactttaattt 26123428  T
Q  408 tatcatattatttgtagatat 428  Q
    |||||||||||||||||||||    
T  26123429 tatcatattatttgtagatat 26123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 4643923 - 4643994
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  ||||| |||||| |||||    
T  4643923 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaaagttgcagatccg 4643994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 280 - 371
Target Start/End: Original strand, 14183841 - 14183932
Alignment:
Q  280 gtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||| ||| ||||||  | ||||||||||||| |||||||||||||||||  ||||||||||| ||||| |  ||||||||||||    
T  14183841 gtgttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacgttgca 14183932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 25273948 - 25274019
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||  ||||||  |||||||||||| |||||    
T  25273948 cggtgttcatttgattcatattgaaagatcgattattcaatcaaaaatttgggcgtcaacgttgcagatccg 25274019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 31381743 - 31381628
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| |||  |||||  | ||||||| ||||| |||||||| |||||||| |||||||||||| |||||||     
T  31381743 tgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatcgattattcaatcaaagatttggg 31381644  T
Q  359 tgtcaacgttgcaaat 374  Q
     |||||| ||||||||    
T  31381643 cgtcaacattgcaaat 31381628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 256 - 418
Target Start/End: Complemental strand, 43353632 - 43353465
Alignment:
Q  256 ttatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaaga-----tcgtttattcaatcaat 350  Q
    |||||||||| ||| ||||||||   ||||||||| ||||| |||| |||||  ||||||||| ||| |||||||| |     ||| |||||||||||||    
T  43353632 ttatgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgttacgtcgttcatttgattcctattgaaataaaatatcggttattcaatcaat 43353533  T
Q  351 gatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattat 418  Q
    ||||||   ||||||||||||||| || |   || ||||||||| | |||| ||||||||||||||||    
T  43353532 gatttgagcgtcaacgttgcaaattcggatgaataagtatttcaatcactttaattttatcatattat 43353465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 47417727 - 47417798
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  47417727 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 47417798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 9528898 - 9528836
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||||  ||||||||||||    
T  9528898 tgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgca 9528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 43154085 - 43153967
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||| | ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||||| |||||||||||| ||||||      
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgag 43153986  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     ||||||||| || |||||    
T  43153985 cgtcaacgttacagatccg 43153967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 425
Target Start/End: Original strand, 54021965 - 54022046
Alignment:
Q  344 aatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||||||||||||||||||||||||| ||||||| | |||  ||||||  | ||||  ||||||||||||||||||||||    
T  54021965 aatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattatttgtaga 54022046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 378
Target Start/End: Original strand, 43444458 - 43444530
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccga 378  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||| |||  |||||||||||| ||||||    
T  43444458 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatatgggcgtcaacgttgcagatccga 43444530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 53616674 - 53616603
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||  || ||||||||| |||||||  |||||||||||| |||||    
T  53616674 cggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagatccg 53616603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 36184599 - 36184661
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    |||||||||||| ||  ||||||||||||| |||||||||||||||||| | |||||||||||    
T  36184599 ggtgttcatttgatttctattgaaagatcggttattcaatcaatgattttggtgtcaacgttg 36184661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 425
Target Start/End: Complemental strand, 4142760 - 4142675
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||| |||||||||||| |||||||||||| ||||  | | |||||||||||  | |||| | |||||||||||||||||||||    
T  4142760 attcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaga 4142675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 1531926 - 1532038
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    |||||| |||| |||||||| | ||||||||| ||  ||||||  | ||||||| ||||| ||||| ||||||||||  ||||||||||||  ||||||     
T  1531926 tgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaaagatcaattattcaatcaaaaatttggg 1532025  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  1532026 cgtcaacgttgca 1532038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 10359570 - 10359506
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||||| ||||||||||||||||| ||||||||| || |||||||   |||||||||||    
T  10359570 ggtgttcatttgattcatattgaaagatcgattattcaataaaagatttgggcatcaacgttgca 10359506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 22611284 - 22611368
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | |||| | ||||||||||||||||||||    
T  22611284 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtag 22611368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 24099075 - 24098991
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| | | ||| |||||||| | ||||   ||||||||||||||||||||    
T  24099075 attcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtag 24098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 32766615 - 32766699
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| ||||| |||||| ||||| | | ||| |||||||  | |||| | ||||||||||||||||||||    
T  32766615 attcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtag 32766699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 377
Target Start/End: Complemental strand, 38706859 - 38706663
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtag 280  Q
    |||||||| |||||||| ||||||  | |||||||||| |||||| ||| |||||| | || ||| | ||||    | ||||||| ||| ||||||| ||    
T  38706859 tatttcaatctaaataagtgattttcacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcag 38706760  T
Q  281 tgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
     ||||||| | ||   |||||  | ||||||| ||||| || |||||||||||||| |||||||||| | |||||||   |||||||||||||||||    
T  38706759 cgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaaagatcgattattcaatcgaagatttgggcatcaacgttgcaaatccg 38706663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 53811129 - 53811213
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | |||| | ||||||||||||||||||||    
T  53811129 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtag 53811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 357
Target Start/End: Complemental strand, 3336180 - 3336129
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgg 357  Q
    ||||||||||||| ||||||||||||||| | |||||||||||| |||||||    
T  3336180 cggtgttcatttgattcatattgaaagattgattattcaatcaaagatttgg 3336129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 29965700 - 29965771
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||| | || ||||||||| |||||||   ||||||||||| |||||    
T  29965700 cggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttgggcatcaacgttgcagatccg 29965771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 34024461 - 34024391
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||| |||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| |||||    
T  34024461 cggtgttc-tttgattcatattgaaagatcgattattcaatcaacgatttgagcgtcaacgttgcagatccg 34024391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 50766536 - 50766465
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||  || ||||||||| ||||||   |||||||||||| |||||    
T  50766536 cggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgagcgtcaacgttgcagatccg 50766465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 6972828 - 6972946
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||  ||  |||||| || | ||||||||||  ||| ||||||||||||| |||||||||||| | |||||     
T  6972828 tgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaaggtttggg 6972927  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  6972928 cgtcaacgttgcagatccg 6972946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 12265520 - 12265590
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||| ||| ||||||||||||||||  |||||||||||| ||||||   |||||||||||| |||||    
T  12265520 ggtgttcacttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccg 12265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 424
Target Start/End: Original strand, 36161811 - 36161896
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||||||| | ||||||| || ||||||| | ||||||||||   | | ||  |||||||||||||||||||||    
T  36161811 tattcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtag 36161896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 52097938 - 52097889
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgg 357  Q
    ||||||||||| ||||||||||||||||  |||||||||||| |||||||    
T  52097938 gtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgg 52097889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 371
Target Start/End: Original strand, 2624438 - 2624627
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgattcgtcgtc-tgattgtgtcattatgttgtttgtcatcttgtgtag 280  Q
    |||||||| |||||||| ||||||  | |||||| ||| |||||| ||||||||||  ||||| ||| ||||    | ||||||| ||| |||||||  |    
T  2624438 tatttcaatctaaataagtgattttcacatagatctaggtttttttcttcgtgatt--tcgtcatgagtgtggtggtgtgttgttcgtcgtcttgtgcgg 2624535  T
Q  281 tgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaaga-tcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
     || |||||| ||   ||||| || ||||||| ||||| |||||||||||||| ||| |||||||||||| || ||||  ||||||||||||    
T  2624536 cgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaatcaaagaattgggcgtcaacgttgca 2624627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 45228060 - 45228000
Alignment:
Q  311 ttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||| || | |||||||||||| |||||||||||| |||||||  ||||||||||||    
T  45228060 ttcatttgatttacattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgca 45228000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 51318041 - 51318121
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||| ||||| ||||||||||||||| | || |||||||||  ||||||  |||||||||||| |||||    
T  51318041 gtcttcttgcggtgttaatttgattcatattgaaagattgattgttcaatcaacaatttgggcgtcaacgttgcagatccg 51318121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 56194657 - 56194721
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgt 361  Q
    ||||| || ||||||||||||  ||| ||||||||||||| ||||| |||||| |||||||||||    
T  56194657 gtcttcttgcggtgttcattttattcctattgaaagatcgattatttaatcaaagatttggatgt 56194721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 1008319 - 1008366
Alignment:
Q  311 ttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    |||||||| |||||||| ||| |||| |||||||||||||||||||||    
T  1008319 ttcatttgattcatattaaaatatcgattattcaatcaatgatttgga 1008366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 18048889 - 18048964
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagat 334  Q
    ||||||||||| |||||||| | ||||||||| |||  | ||| || |||||||| |||| |||||||||||||||    
T  18048889 tgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagat 18048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 415
Target Start/End: Complemental strand, 27593837 - 27593743
Alignment:
Q  320 ttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatat 415  Q
    ||||||||||||||||| ||||||||| || |||||||| |||||| ||||| ||| | ||  ||||||||| |  | |||| |||||||||||||    
T  27593837 ttcatattgaaagatcgattattcaataaaagatttgga-gtcaacattgcagatctggagccatgagtattcctgtcactttaattttatcatat 27593743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 37188618 - 37188548
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||| || ||||| ||||| ||||| |||||||||||| |||||||  |||||||||||| |||||    
T  37188618 cggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 37188548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 2115607 - 2115541
Alignment:
Q  311 ttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||  ||||||||||||||||| || |||||||||  ||||||  |||||||||||| |||||    
T  2115607 ttcatttaattcatattgaaagatcgattgttcaatcaaaaatttgggcgtcaacgttgcagatccg 2115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 381
Target Start/End: Complemental strand, 8009432 - 8009310
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||   |||||  ||||||||||||||| ||| ||  ||||||| | ||||||||||||  ||||||     
T  8009432 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacagaaagattgattattcaatcaaaaatttggg 8009333  T
Q  359 tgtcaacgttgcaaatccgaaga 381  Q
     |||||||||| | |||||||||    
T  8009332 cgtcaacgttgtatatccgaaga 8009310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 36204387 - 36204350
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  36204387 attcaatcaatgatttggacgtcaacgttgcagatccg 36204350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 429
Target Start/End: Complemental strand, 48257628 - 48257551
Alignment:
Q  352 atttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
    ||||||| ||||||||| || ||||||| | ||| |||||||  | |||| | |||||||||||||||||||| ||||    
T  48257628 atttggacgtcaacgttacagatccgaaaacatgggtatttcggtgacttgagttttatcatattatttgtaggtatt 48257551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 18138984 - 18138872
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||   |||| || | ||||||||||| ||  ||||||||||||| |||||||||||   ||||||     
T  18138984 tgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttggg 18138885  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  18138884 cgtcaacgttgca 18138872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 33332577 - 33332541
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  33332577 attcaatcaatgatttggacgtcaacgttgcagatcc 33332541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 33921155 - 33921239
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||| |||||   |||||||||||| ||||| |   ||| |||||||| | ||||  |||||||||||||||||||||    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtag 33921239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 35261209 - 35261285
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    ||||||||||| |||| ||  | ||||||||| |||  ||||| || ||||||||||||| |||||||| |||||||    
T  35261209 tgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatc 35261285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 47320420 - 47320384
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  47320420 attcaatcaatgatttggacgtcaacgttgcagatcc 47320384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 49126197 - 49126085
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||   |||| || | ||||||||||| ||  ||||||||||||| |||||||||||   ||||||     
T  49126197 tgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattcaatcacatatttggg 49126098  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  49126097 cgtcaacgttgca 49126085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 49680610 - 49680674
Alignment:
Q  313 catttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||| ||||||||||||||| | || |||||||||  ||||||  |||||||||||| |||||    
T  49680610 catttgattcatattgaaagatagattgttcaatcaaatatttgggcgtcaacgttgcagatccg 49680674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 36734763 - 36734607
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||||| ||||||||||||| |||||| |||||||||| ||||| |||||| |||||||     
T  36734763 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatcgattattgaatcaaagatttggg 36734664  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatat 415  Q
     |||||||||||| ||| | ||  |||||||||||  |||||| |||||||||||||    
T  36734663 cgtcaacgttgcagatctggaggcatgagtatttcggttactttaattttatcatat 36734607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 30648743 - 30648672
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  30648743 cggtgttcattttattcatattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcaaatccg 30648672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 46934645 - 46934763
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  ||||||||||| ||   ||||| || ||||||||||||| ||||||||||||||||| |||||||||||| |||||||     
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttggg 46934744  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||| ||||| |||||    
T  46934745 cgtcaacattgcagatccg 46934763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 42719520 - 42719632
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||||| |||||||||||| |||| |||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattcgga 42719619  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  42719620 ggtcaacgttgca 42719632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 14464560 - 14464631
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  14464560 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 14464631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 371
Target Start/End: Original strand, 31794097 - 31794186
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||| ||| | |||| || ||||||||||||| ||||||||||||||||| |||||||||||| |||||||   |||||||||||    
T  31794097 gttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgca 31794186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 369
Target Start/End: Original strand, 21488092 - 21488204
Alignment:
Q  257 tatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttg 356  Q
    ||||||||||||| |||||||  | ||||||||| ||   ||||| || ||||||| ||||| |||||||||||| |||| |||||||||||| ||||||    
T  21488092 tatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttg 21488191  T
Q  357 gatgtcaacgttg 369  Q
    |  ||||||||||    
T  21488192 ggcgtcaacgttg 21488204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 23799918 - 23799834
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||| |  |||||||||||| ||||||| | |||||||||||| | ||||  |||||||||||||||||||||    
T  23799918 attcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtag 23799834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 3848943 - 3848872
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  3848943 cggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 3848872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 25162486 - 25162557
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| |||||    
T  25162486 cggtgttcatttgtttcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccg 25162557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 39917422 - 39917351
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| |||||    
T  39917422 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccg 39917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 51202278 - 51202207
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||  | |||||||||| |||||||  ||||||||||||||||||    
T  51202278 cggtgttcatttgattcatattgaaagatcagtaattcaatcaaagatttgggcgtcaacgttgcaaatccg 51202207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 32607472 - 32607590
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||| | ||||||||| ||   |||||  | ||||||||||||| ||||||||||||||| | || ||||||||| |||||||     
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaagatttggg 32607571  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  32607572 cgtcaacgttgcagatccg 32607590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 26275827 - 26275743
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||| | ||| ||||||||| || |||| | |||||||||||| | ||||  |||||||||||||||||||||    
T  26275827 attcaatcaatgattttgttgttaacgttgcagattcgaaaacatgagtatttcagtgacttatattttatcatattatttgtag 26275743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 12116148 - 12116219
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||||||   |||||||||||| |||||    
T  12116148 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaacgttgcagatccg 12116219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 22803072 - 22803143
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| ||||||   |||||||||||| |||||    
T  22803072 cggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccg 22803143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 25631550 - 25631487
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||||||||||| || |||||||||||||| |||||||||||| |||||||  ||||||||||    
T  25631550 cggtgttcatttgatttatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttg 25631487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 35499222 - 35499151
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||  || ||| |||||||||||    
T  35499222 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgttaacattgcaaatccg 35499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 38855060 - 38854989
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||| |||||||||| |  ||||||  ||||||||||||||||||    
T  38855060 cggtgttcatttgatttatattgaaagatcgattattcaatcgaatatttgggcgtcaacgttgcaaatccg 38854989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 50611442 - 50611371
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||| |||||||||| | |||||||  |||||||||||| |||||    
T  50611442 cggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccg 50611371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 371
Target Start/End: Complemental strand, 38440602 - 38440540
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||| |||||    
T  38440602 tgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacattgca 38440540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 21313116 - 21313200
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||||| ||| ||| |||   |||||||||||  | ||||  |||||||||||||||||||||    
T  21313116 attcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtag 21313200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 2342522 - 2342581
Alignment:
Q  315 tttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaat 374  Q
    |||| |||||||||||| |||| |||||||||||| |||||||  |||||||||||||||    
T  2342522 tttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgttgcaaat 2342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 17237855 - 17237926
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||| ||||| |||||||| ||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  17237855 cggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 17237926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 371
Target Start/End: Original strand, 36906174 - 36906237
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||| ||||||||||||||||  || ||||||||| |||||||  ||||||||||||    
T  36906174 gtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgca 36906237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 44907423 - 44907352
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||  ||||||||||||||||| || |||||||||  ||||||  |||||||||||| |||||    
T  44907423 cggtgttcatttaattcatattgaaagatcgattgttcaatcaaatatttgggcgtcaacgttgcagatccg 44907352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 25849851 - 25849945
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatt 391  Q
    ||||| || ||||||||||||| |||||||||||| |||| ||||||||| || |||||    |||||||||||| ||||| ||| |||| ||||    
T  25849851 gtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacgttgcagatccggagacatgaatatt 25849945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 29503465 - 29503582
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | | ||||||| |||  ||||| || |||||||||| || ||||| ||||| ||||| |||||||||||| |||||||     
T  29503465 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttggg 29503563  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  29503564 cgtcaacgttgcagatccg 29503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 49552295 - 49552177
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| || | || || || ||||||||||||  |||| |||||||||||| |||||||||||| ||||||      
T  49552295 tgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatcgattattcaatcaaagatttgag 49552196  T
Q  359 tgtcaacgttgcaaatccg 377  Q
      ||||||||||| |||||    
T  49552195 catcaacgttgcagatccg 49552177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 425
Target Start/End: Complemental strand, 7448922 - 7448837
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | |||| | ||| |||||||||||||||||    
T  7448922 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtaga 7448837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 425
Target Start/End: Complemental strand, 7457064 - 7456979
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||| |||||||||||| |||||||||||| ||||| |   |||||||||||  | |||| | ||| |||||||||||||||||    
T  7457064 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtaga 7456979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 46178621 - 46178690
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| |||||||||||| || | |||||||||||| || ||||  |||||||||||| |||||    
T  46178621 gtgttcatttgattcatattgaaatattgattattcaatcaaagaattgggcgtcaacgttgcagatccg 46178690  T

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Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 348
Target Start/End: Complemental strand, 6910731 - 6910691
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatca 348  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  6910731 gtgttcatttgattcatattgaaagatcgattattcaatca 6910691  T

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Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 35175483 - 35175535
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatt 391  Q
    ||||||||||||||||||||  ||||||||||| ||||||| | |||||||||    
T  35175483 tattcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtatt 35175535  T

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Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 48650742 - 48650658
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||| ||||||| |||||||||||| ||| |||   |||||||||||  | |||| | ||||||||||||||||||||    
T  48650742 attcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtag 48650658  T

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Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 52923125 - 52923041
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  52923125 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 52923041  T

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Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 53508306 - 53508390
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||| ||||| |||| ||   ||||||||| || | | ||  |||||||||||||||||||||    
T  53508306 attcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatcatattatttgtag 53508390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 4178615 - 4178686
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||  |||||||| ||| |||||||  |||||| ||||| |||||    
T  4178615 cggtgttcatttgatttatattgaaagatccattattcaaacaaagatttgggcgtcaacattgcagatccg 4178686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 334
Target Start/End: Complemental strand, 4396437 - 4396362
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagat 334  Q
    ||||||||||| |||||||| | ||||||||| |||  | ||| || |||||||| |||| |||||||||||||||    
T  4396437 tgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagat 4396362  T

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Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 12050656 - 12050573
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    |||||| ||||||||||| ||||||||||||| ||||| | | |||||||||||    ||||   |||||||||||||||||||    
T  12050656 attcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgta 12050573  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 424
Target Start/End: Original strand, 19619795 - 19619877
Alignment:
Q  341 ttcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||| | ||||||||||| | ||||||||  ||||| |||||  | ||||  |||||||||||||||||||||    
T  19619795 ttcaatcaatgatttaggtgtcaacgttgtagatccgaag-catgagaatttcggtgacttagattttatcatattatttgtag 19619877  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 335
Target Start/End: Original strand, 35175366 - 35175465
Alignment:
Q  236 ttcgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    |||||||||||| |  | |||| |||||||  || ||||||| || ||||||||| ||  |||||| || |||||||| ||||||| |||||||||||||    
T  35175366 ttcgtcgtctgagtacgacattgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatc 35175465  T

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Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 46980070 - 46980015
Alignment:
Q  182 tatttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgatt 237  Q
    ||||||||  ||||||| |||||| ||||||||||||| |||||| ||||||||||    
T  46980070 tatttcaatttaaataagtgatttatatatagatttaggtttttttcttcgtgatt 46980015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 356
Target Start/End: Original strand, 6902943 - 6902992
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttg 356  Q
    |||||||| |||||| |||||||||||||   ||||||||||||||||||    
T  6902943 ggtgttcagttggtttatattgaaagatcaaatattcaatcaatgatttg 6902992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 14859522 - 14859551
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatc 335  Q
    ||||||||||||||||||||||||||||||    
T  14859522 cggtgttcatttggttcatattgaaagatc 14859551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 14859569 - 14859606
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  14859569 tattcaatcaatgatttggacgtcaacgttgcagatcc 14859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 29922136 - 29922173
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  29922136 tattcaatcaatgatttggacgtcaacgttgcagatcc 29922173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 376
Target Start/End: Original strand, 29971289 - 29971326
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  29971289 tattcaatcaatgatttggacgtcaacgttgcagatcc 29971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 4821816 - 4821868
Alignment:
Q  283 ttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    |||||||| |||  ||||| || |||||||| |||||||||||||||||||||    
T  4821816 ttgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatc 4821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 21431693 - 21431777
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| ||| |||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  21431693 attcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 21431777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 391
Target Start/End: Original strand, 37169246 - 37169365
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    ||||||| || ||||||||| |||  || || || ||||| ||||||| ||||||| ||| ||||  ||||||||| || || || || |||||||||||    
T  37169246 tcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttgattcatatcgaa-gatcaattattcaattaaagaattagacgtcaacgttgc 37169344  T
Q  371 aaatccgaagatatgagtatt 391  Q
    | ||||| ||||||| |||||    
T  37169345 agatccggagatatgtgtatt 37169365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 391
Target Start/End: Original strand, 50460436 - 50460468
Alignment:
Q  359 tgtcaacgttgcaaatccgaagatatgagtatt 391  Q
    ||||||||||||||||||||||| |||||||||    
T  50460436 tgtcaacgttgcaaatccgaagacatgagtatt 50460468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Original strand, 51923807 - 51923843
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  51923807 attcaatcaatgatttggacgtcaacgttgcagatcc 51923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 53807866 - 53807830
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  53807866 attcaatcaatgatttggacgtcaacgttgcatatcc 53807830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 377
Target Start/End: Complemental strand, 1448878 - 1448783
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||    
T  1448878 gttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatccattattcaatcaaagatttggatgtcaacgttgcagatccg 1448783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 42408368 - 42408488
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| |||  |||||  | |||| |||||||| ||||||||||||||||| |||||||||||| |||||||     
T  42408368 tgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatcgattattcaatcaaagatttggg 42408467  T
Q  359 tgtcaacgttgcaaatccgaa 379  Q
     |||||||||||| |||||||    
T  42408468 cgtcaacgttgcagatccgaa 42408488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 17223022 - 17222959
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  17223022 gtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggatgtcaacgttgca 17222959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 42311286 - 42311404
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||| || || ||||||||| |||  |||||  | || |||||||||| ||||||||||||||||| |||||||||||| |||||||     
T  42311286 tgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggc 42311385  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  42311386 cgtcaacgttgcagatccg 42311404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 371
Target Start/End: Complemental strand, 14627927 - 14627838
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||| || | |||||| ||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||   ||||||||||||    
T  14627927 gttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgca 14627838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 380
Target Start/End: Original strand, 46339060 - 46339181
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  ||||||||||||||| ||||||||||||||||  || ||||||||| |||||||     
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttggg 46339159  T
Q  359 tgtcaacgttgcaaatccgaag 380  Q
     |||||||||||| || |||||    
T  46339160 cgtcaacgttgcagattcgaag 46339181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 22927903 - 22927823
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||| |||||    
T  22927903 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 22927823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 385
Target Start/End: Original strand, 6002074 - 6002153
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatg 385  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| ||||||   |||||||||||| |||||||| ||||    
T  6002074 cggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgagcgtcaacgttgcagatccgaaggtatg 6002153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 34773740 - 34773835
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| ||  |||||| || ||||||||||||| ||||||||||||||||| |  ||||||||| |||||||  |||||||||||| |||||    
T  34773740 gttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatcgatcgttcaatcaaagatttgggcgtcaacgttgcagatccg 34773835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 433750 - 433644
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    ||||||| || ||||||||  || | ||||| |||| ||||||||||  ||| ||||||||||||| |||||||||||| |||||||| || ||||||||    
T  433750 tcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgttaacgttgc 433651  T
Q  371 aaatccg 377  Q
    | |||||    
T  433650 agatccg 433644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 23085565 - 23085639
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||| || ||||||||||||  ||||||||||||||||| |||||||||||| |||||| | ||||||||||||    
T  23085565 gtcttcttgcggtgttcattttattcatattgaaagatcgattattcaatcaaagatttgaacgtcaacgttgca 23085639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 23786604 - 23786690
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgtt 368  Q
    ||||||||| || | ||||| || ||||||||||||| ||||||||||||||||| |||||||||||| |||||  | |||||||||    
T  23786604 gttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttaaacgtcaacgtt 23786690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 42067132 - 42067015
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | | ||||||| || | ||||| || ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||     
T  42067132 tgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttggg 42067034  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  42067033 cgtcaacgttgcagatccg 42067015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 19560053 - 19560122
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| ||||||||||||||| | |||||||||||| |||||||| |||||| ||||| |||||    
T  19560053 gtgttcatttgattcatattgaaagattgattattcaatcaaagatttggacgtcaaccttgcagatccg 19560122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 35667303 - 35667206
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttg 356  Q
    ||||||| ||| |||||||  | ||| ||||| |||  ||||| || ||||||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaacgatttg 35667206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 26492421 - 26492489
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||||||  |||||||||||| |||||    
T  26492421 tgttcatttgattcatattgaaaggtcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 26492489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 6558930 - 6559001
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||| |||||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  6558930 cggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 6559001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 415
Target Start/End: Original strand, 35261353 - 35261460
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattt 407  Q
    ||||||||||| |||||||| |||||||| |||||||||||| ||||| || ||||| |||||| ||||| ||  ||| ||||| |  | |||| |||||    
T  35261353 gtgttcatttgattcatattaaaagatcgattattcaatcaaagatttagacgtcaatgttgcagatccggaggcatgtgtattccggtcactttaattt 35261452  T
Q  408 tatcatat 415  Q
    ||||||||    
T  35261453 tatcatat 35261460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 35496199 - 35496128
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||| |||||||||| | |||||||  |||||||||||| |||||    
T  35496199 cggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgggcgtcaacgttgcagatccg 35496128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 46822068 - 46822139
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| |||||||| |||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  46822068 cggtgttcatttgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 46822139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 17611154 - 17611228
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttg 356  Q
    ||||||||| ||| |||||| || | ||||||||||| ||||||||||||||| | |||||||||||| ||||||    
T  17611154 gttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaaagattgattattcaatcaaagatttg 17611228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 20116626 - 20116700
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||   |||||  ||||||||||||    
T  20116626 gtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaaactttgggcgtcaacgttgca 20116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 31235863 - 31235745
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| || | || |  || ||||||||||||| ||||||||||||||||  ||||||||||||   ||||      
T  31235863 tgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaatctttgag 31235764  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     ||||||||||||||||||    
T  31235763 cgtcaacgttgcaaatccg 31235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 32684721 - 32684783
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgtt 368  Q
    ||||||||||||| |||||||||||| |||| |||||||||||| |||||||  |||||||||    
T  32684721 cggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtcaacgtt 32684783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 43369791 - 43369682
Alignment:
Q  311 ttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttat 410  Q
    |||||||||||| |||||||||||||  ||||||||||||| ||| |   ||||||||||| ||||| |   |||||||||  | | |||| ||||||||    
T  43369791 ttcatttggttcctattgaaagatcggctattcaatcaatggttttgtcatcaacgttgcagatccggatgcatgagtattctagtcactttaattttat 43369692  T
Q  411 catattattt 420  Q
    ||||||||||    
T  43369691 catattattt 43369682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 46244292 - 46244176
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatt 406  Q
    |||||||||||||||| |||||||| |||| |||||| ||||||||||||   ||||||||||||  | |||||| ||   |||||   | |||| ||||    
T  46244292 ggtgttcatttggttcctattgaaaaatcggttattc-atcaatgatttgagcgtcaacgttgcaggttcgaagacattgatattttggtcactttaatt 46244194  T
Q  407 ttatcatattatttgtag 424  Q
    ||||||||||||||||||    
T  46244193 ttatcatattatttgtag 46244176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 19404765 - 19404681
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  ||||| |||||| ||||| |   |||||||||||| | ||||  |||||||||||||||||||||    
T  19404765 attcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtag 19404681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 32521998 - 32521902
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgattt 355  Q
    ||||||| |||||||||||  | ||||||||| |||  || || ||  |||||||||||| ||||||||||||||||  |||||||||||| |||||    
T  32521998 tgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaattattcaatcaaagattt 32521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 2843265 - 2843194
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||||||   ||||| |||||| |||||    
T  2843265 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaatgttgcagatccg 2843194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 5348600 - 5348516
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  ||| |||||||| || |||| ||||| |||||||| | ||||  | |||| ||||||||||||||    
T  5348600 attcaatcaatgatttgggcgtcgacgttgcagattcgaaaatatgtgtatttcagtgacttagaatttaccatattatttgtag 5348516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 19296953 - 19297037
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  19296953 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtag 19297037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 26583770 - 26583810
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  26583770 tgttcatttgattcatattgaaagatcgattattcaatcaa 26583810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 45199065 - 45198986
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || |||||||||| || ||||| ||||| ||||| |||||||||||| |||||||  |||||||||||| |||||    
T  45199065 gtcttcttgcggtgttcatctgattcattttgaa-gatcggttattcaatcaaagatttgggcgtcaacgttgcagatccg 45198986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 364
Target Start/End: Complemental strand, 969589 - 969443
Alignment:
Q  221 ttttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttgg 319  Q
    |||||| |||||||||| | |||| ||| |||| | || ||||||| ||| |||| ||  | ||||||||| |||  |||||||| |||||||  |||||    
T  969589 tttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttgg 969490  T
Q  320 ttcatattgaaagatc--gtttattcaatcaatgatttggatgtcaa 364  Q
    |||||||||||| |||   |||| ||||| ||||||||||| |||||    
T  969489 ttcatattgaaaaatcatctttagtcaattaatgatttggacgtcaa 969443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 12141316 - 12141233
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | ||||  ||||||||||||||||||||    
T  12141316 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgta 12141233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 423
Target Start/End: Complemental strand, 34899615 - 34899532
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    |||||| |||||||||||| ||||||||||||||| || |   ||| |||||||  | |||| | |||||||||||||||||||    
T  34899615 attcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgta 34899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 1485262 - 1485210
Alignment:
Q  325 attgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||| |||| |||||||||||| |||||||| |||||| ||||| |||||    
T  1485262 attgaaaaatcgattattcaatcaaagatttggacgtcaacattgcagatccg 1485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 20083382 - 20083461
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||| ||| || || ||||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  20083382 gtcttgttgcggtgttcagttgttttattttgaaagatcgatt-ttcaatcaaagatttgggcgtcaacgttgcatatccg 20083461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 21266435 - 21266514
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || |||||||||| || ||||||||||| ||||| |||||||||||| ||||||    ||||||||||| |||||    
T  21266435 gtcttcttgcggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttgagcatcaacgttgcagatccg 21266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 48207945 - 48208024
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||| ||||| ||||| ||||  |||| ||||||| |||||||  |||||||||||| |||||    
T  48207945 gtcttcttgcggtgttcatttgattcattttgaa-gatccattatacaatcaaagatttgggcgtcaacgttgcagatccg 48208024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 391
Target Start/End: Original strand, 9418426 - 9418554
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||||||  || ||||| |||||||||| || || |||||||||||||| ||||||||||| || | |||||||||||||||||     
T  9418426 tgttgttcgtcgtcttgtgtagcattatttgattttttgtcttgttgcgatgttcatttggttcctattgaaagattgtcttttcaatcaatgatttggg 9418525  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatt 391  Q
    |||||||||||    |||| |||||||||||||    
T  9418526 tgtcaacgttg----tccggagatatgagtatt 9418554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 282 - 417
Target Start/End: Original strand, 18113902 - 18114037
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaaga 381  Q
    ||||||||| |||  |||||||| ||||||| || ||||||||||||||| |||  ||||||||| |||||||||||||||||||||||| |||| ||||    
T  18113902 gttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaatatcagttattcaataaatgatttggatgtcaacgttgcagatccaaaga 18114001  T
Q  382 tatgagtatttcacttacttcaattttatcatatta 417  Q
    |||   ||||||  | | || |||||||||||||||    
T  18114002 tatcgatatttcgatcaatttaattttatcatatta 18114037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 20047153 - 20047035
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||  |||||| |||||||||||||||  ||| ||||||||||||| |||||||||||| ||||||||    
T  20047153 tgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatcgattattcaatcaaagatttgga 20047054  T
Q  359 tgtcaacgttgcaaatccg 377  Q
      ||||||||||| |||||    
T  20047053 catcaacgttgcagatccg 20047035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 22421745 - 22421870
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||||||||| |  ||||||||||| ||    |||| || ||||||||||||| ||| ||||||||||||| ||||||||||||||||||||     
T  22421745 tgttgttcgtcatcttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattcaatcaatgatttggg 22421844  T
Q  359 tgtcaacgttgcaaatccgaagatat 384  Q
     ||||||||| || ||||| ||||||    
T  22421845 cgtcaacgttacagatccggagatat 22421870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 415
Target Start/End: Complemental strand, 37614173 - 37614040
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaaga 381  Q
    ||||||||| |||  ||||| || ||||||||||||| ||||||||||||||| | ||||||||||||  ||||   ||||||||||||| ||| | |||    
T  37614173 gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattcaatcaaatatttttgtgtcaacgttgcagatcgggaga 37614074  T
Q  382 tatgagtatttcacttacttcaattttatcatat 415  Q
     ||||||||| || | |||| |||||||||||||    
T  37614073 catgagtattccaatcactttaattttatcatat 37614040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 259 - 379
Target Start/End: Complemental strand, 7015782 - 7015662
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| |||||||||||| |||| |||||||||||| |||||||     
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattcaatcaaagatttggg 7015683  T
Q  359 tgtcaacgttgcaaatccgaa 379  Q
     |||||||||||| |||||||    
T  7015682 cgtcaacgttgcagatccgaa 7015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 3269135 - 3269064
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  3269135 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 3269064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 3269694 - 3269623
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  3269694 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 3269623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 3270253 - 3270182
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  3270253 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 3270182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 369
Target Start/End: Original strand, 13141446 - 13141605
Alignment:
Q  212 agatttagat-tttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggt 309  Q
    |||||||||| ||||| |||||||||| | |||||| | |||| | || ||||||| ||| | ||||| | |||||||||| ||| |||||| ||  |||    
T  13141446 agatttagatcttttttcttcgtgatttcatcgtctaaatgtgactttgtgttgttcgtcgttttgtgcattgttgtttgattttatgtcttgttttggt 13141545  T
Q  310 gttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
     |||||||||||| |||| ||||||||  ||||| |||||||||||||| ||||||||||    
T  13141546 attcatttggttcctatttaaagatcgactattcgatcaatgatttggacgtcaacgttg 13141605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 377
Target Start/End: Complemental strand, 26025458 - 26025363
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| |||| ||||| || ||||||||||||| ||||| ||||||||||| ||||||||||||  |||||| |||||| |||||| |||||    
T  26025458 gttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcggttattcaatcaaaaatttgggtgtcaatgttgcagatccg 26025363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 8308181 - 8308298
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||| ||| ||| || || | || |||||||| ||||||||||||||||| |||||||||||| || |||||    
T  8308181 tgttgttcgtcgtcttgtgcagcgttgtttga-tttctgtattgttgcagttttcatttgattcatattgaaagatcgattattcaatcaaagaattgga 8308279  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  8308280 cgtcaacgttgcagatccg 8308298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 423
Target Start/End: Original strand, 36323915 - 36324028
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatttt 408  Q
    |||||||||||||| ||||||||||||  |||||||||||||| |||||| |||||||||||| ||| || || ||||||||| ||   | || ||||||    
T  36323915 tgttcatttggttcctattgaaagatctgttattcaatcaatggtttggacgtcaacgttgcagatctgagga-atgagtattccagacattttaatttt 36324013  T
Q  409 atcatattatttgta 423  Q
    |||||| ||||||||    
T  36324014 atcataatatttgta 36324028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 9986413 - 9986301
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||||| ||||||||| || |||||||     
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaattaaagatttggg 9986314  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  9986313 cgtcaacgttgca 9986301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 370
Target Start/End: Original strand, 34599044 - 34599108
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||    
T  34599044 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgc 34599108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 84204 - 84134
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| |||||||||||| |||| |||||||||||| |||||||| |||||||||||| |||||    
T  84204 cggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccg 84134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 282 - 377
Target Start/End: Complemental strand, 459322 - 459227
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| |||  ||||| || ||||||||||||| ||||||||||||||||| ||||| |||||| ||||| |  |||||||||||| |||||    
T  459322 gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgattatttaatcaaagatttaggcgtcaacgttgcagatccg 459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 6173689 - 6173760
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| | |||||||||| |||||||  |||||||||||| |||||    
T  6173689 cggtgttcatttgattcatattgaaagatcgatcattcaatcaaagatttgggcgtcaacgttgcagatccg 6173760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 36234065 - 36234136
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  36234065 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 36234136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 41431076 - 41431155
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||| || ||||||||||||  |||  |||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  41431076 gtcttcttgcggtgttcattttattccaattgaaagatcgattattcaatcaaagatttggatgtcaacgttgcagatcc 41431155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 30420688 - 30420806
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||| | || ||||||||| |||||||     
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatagattgttcaatcaaagatttggg 30420787  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  30420788 cgtcaacgttgcagatccg 30420806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 32679169 - 32679063
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    |||||||| | ||||||||  ||  |||||| || || |||||||||  ||| ||||||||||||| |||||||||||| |||||||| |||||||||||    
T  32679169 tcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattcaatcaaagatttggacgtcaacgttgc 32679070  T
Q  371 aaatccg 377  Q
    | |||||    
T  32679069 agatccg 32679063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Original strand, 32913251 - 32913368
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | | ||||||| |||  ||||| ||||||||||||| || ||||||||||| ||||| |||||||||||| |||||||     
T  32913251 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttcatctgattcatattgaa-gatcgattattcaatcaaagatttggg 32913349  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  32913350 cgtcaacgttgcagatccg 32913368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 416
Target Start/End: Complemental strand, 44881813 - 44881656
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| |||||||||||  |  || ||| | |||||||||| ||||  |||||||||| |||||||| ||||||   ||||||||||||| ||||| |    
T  44881813 tgttgttcgtcatcttgtgcggcattattttattttttgtcttcttacaatgttcatttgattcatattaaaagattagttattcaatcaataatttgca 44881714  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatatt 416  Q
      | ||| ||||| ||||| ||| |||||||||||  | |||| ||||||||||||||    
T  44881713 cattaacattgcagatccggagacatgagtatttcggtcactttaattttatcatatt 44881656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 8805924 - 8805988
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||||| ||||||||||||||||| |||||||||||| ||||| |  ||||||||||||    
T  8805924 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgca 8805988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 371
Target Start/End: Original strand, 25087108 - 25087159
Alignment:
Q  320 ttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  25087108 ttcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttgca 25087159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 2808543 - 2808425
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| |||  || || || || ||||||| || ||||||||||||||||| |||||||||||| ||||| |     
T  2808543 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatcgattattcaatcaaagattttgg 2808444  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  2808443 cgtcaacgttgcagatccg 2808425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 27249175 - 27249105
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||  |||| ||||||| ||||    
T  27249175 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcagcgttgcagatcc 27249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 423
Target Start/End: Original strand, 7448337 - 7448421
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgta 423  Q
    ||||||| |||| ||||||| |||||||||||| ||||| |   |||||||||||| | |||| | |||||||||||||||||||    
T  7448337 tattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagttttatcatattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 17994739 - 17994655
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||| |||||||||||| ||||| |   ||  |||||||  | |||| ||||||||||||||||||||||    
T  17994739 attcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtag 17994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 31128789 - 31128705
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||| |  |||||||||||| ||||| |   |||||||||||| | ||||  |||||||||||||||||||||    
T  31128789 attcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtag 31128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 31788547 - 31788631
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| |||||||   |||||||||||| | ||||   ||||| ||||||||||||||    
T  31788547 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtag 31788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 21570431 - 21570361
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||  ||||| |||||| |||||    
T  21570431 cggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaatgttgcagatccg 21570361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 381
Target Start/End: Original strand, 27477206 - 27477280
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaaga 381  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||| |||||||   ||||||||||| ||| |||||    
T  27477206 cggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcatcaacgttgcagatcggaaga 27477280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 27949486 - 27949553
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    |||||||||| ||||||| ||||||||  |||||||||||| |||||||  |||||||||||| ||||    
T  27949486 tgttcatttgattcatatcgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatcc 27949553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 371
Target Start/End: Original strand, 3240946 - 3241008
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||||||||| |||||| | |  ||||||||||||||||||||| ||||| ||||||    
T  3240946 tgttcatttggttcatgttgaaataccagttattcaatcaatgatttggacgtcaatgttgca 3241008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 3725238 - 3725300
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||||| |||| ||||||||||||||||| |||||||||||| ||||||   ||||||||||    
T  3725238 ggtgttcgtttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttg 3725300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 40626072 - 40626010
Alignment:
Q  315 tttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| |||||    
T  40626072 tttgattcatattgaaagatcgattattcaatcaaagatttgatcgtcaacgttgcagatccg 40626010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 36943123 - 36943046
Alignment:
Q  347 caatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||  |||||||||||| ||||| | | ||| |||||||  | |||| ||||||||||||||||||||||    
T  36943123 caatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtag 36943046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 4778844 - 4778928
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  4778844 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 4778928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 420
Target Start/End: Complemental strand, 19062361 - 19062281
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattattt 420  Q
    ||||||||||||||||||| ||||||||| || |||||||   ||| |||||||  | |||| | ||||||||||||||||    
T  19062361 attcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattattt 19062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 24587730 - 24587833
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    |||||||||| |||| |||| || | || || || |||||||||||| ||||||||||||| |||  ||||||||| |||||||||||  | ||| ||||    
T  24587730 tcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagttcatattgaaa-atcagttattcaattaatgatttggacattaacattgc 24587828  T
Q  371 aaatc 375  Q
    |||||    
T  24587829 aaatc 24587833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 25509077 - 25508993
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||| |||  |||||||||||||||||| | | ||| |||||||  | ||||  |||||||| ||||||||||||    
T  25509077 attcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtag 25508993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 29279579 - 29279495
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||||   ||||| |||||| ||||| | | |||||| ||||  | |||| ||||||||||||||||||||||    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtag 29279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 375
Target Start/End: Complemental strand, 39285317 - 39285249
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatc 375  Q
    |||||||||||| ||| |||||||| || | ||||||||||||| ||||||| | |||| |||||||||    
T  39285317 ggtgttcatttgattcctattgaaatatagattattcaatcaataatttggacgacaacattgcaaatc 39285249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 336
Target Start/End: Complemental strand, 4904223 - 4904172
Alignment:
Q  285 gtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcg 336  Q
    |||||| ||| |||||| || |||||||| ||||||||||||||||||||||    
T  4904223 gtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcg 4904172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Complemental strand, 8971648 - 8971582
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    |||||||||| |||||| |||||||||  |||| |||| || ||||||||||||||||||||| ||||    
T  8971648 tgttcatttgattcataatgaaagatcaattat-caattaaagatttggatgtcaacgttgcagatcc 8971582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 424
Target Start/End: Complemental strand, 11985240 - 11985158
Alignment:
Q  342 tcaatcaatgatttggatgtcaacgttgcaaatcc-gaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||| ||||||||| | ||||||||||||| |||| ||||| |||||||||||| | ||||   ||||||||||||||||||||    
T  11985240 tcaaccaatgatttaggtgtcaacgttgcagatccagaaga-atgagtatttcagtgacttaggttttatcatattatttgtag 11985158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 17261607 - 17261662
Alignment:
Q  320 ttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatc 375  Q
    ||||||||||||||||| ||||||||||||| |||| ||| | |||||| ||||||    
T  17261607 ttcatattgaaagatcgattattcaatcaataattttgatattaacgttacaaatc 17261662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 419
Target Start/End: Complemental strand, 29173729 - 29173650
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatt 419  Q
    ||||||||||| |||||| ||||||||||||| |||||||   ||| |||||||  | ||||  ||||||||||||||||    
T  29173729 attcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattatt 29173650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 45128261 - 45128332
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||  ||| |||||||| |||  |||||||||||| |||||||| || ||||||||| |||||    
T  45128261 cggtgttcattttattcctattgaaatatcaattattcaatcaaagatttggacgttaacgttgcagatccg 45128332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 4264506 - 4264544
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  4264506 gtcttattgcggtgttcatttggttcttattgaaagatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 415
Target Start/End: Complemental strand, 39641891 - 39641773
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcact 396  Q
    ||||| || |||| |||||||  ||||||||||||||||  |||||||||| |  ||||||   ||||||||||| ||||| ||  | |||||||||| |    
T  39641891 gtcttgttgcggtattcatttaattcatattgaaagatcaattattcaatccaaaatttgggcatcaacgttgcagatccggaggcacgagtatttcagt 39641792  T
Q  397 tacttcaattttatcatat 415  Q
     ||||  ||||||||||||    
T  39641791 cacttttattttatcatat 39641773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 355
Target Start/End: Complemental strand, 31580613 - 31580564
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgattt 355  Q
    ||||||||||||| || |||||||||||||| ||||| |||||| |||||    
T  31580613 cggtgttcatttgatttatattgaaagatcgattattaaatcaaagattt 31580564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 40659950 - 40659893
Alignment:
Q  312 tcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||||| ||| || |||||||||| |||||||||||| |||||||  ||||||||||    
T  40659950 tcatttgattcttactgaaagatcgattattcaatcaaagatttgggcgtcaacgttg 40659893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 7646581 - 7646653
Alignment:
Q  352 atttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||| |||||||||||| ||||| |   |||||||||||  | |||| | ||||||||||||||||||||    
T  7646581 atttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtag 7646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 355
Target Start/End: Complemental strand, 9374579 - 9374531
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgattt 355  Q
    |||||||||||| ||||| |||||||| || |||||||||||| |||||    
T  9374579 ggtgttcatttgattcattttgaaagaacgattattcaatcaaagattt 9374531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 10237225 - 10237189
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  10237225 attcaatcaatgatttggacgtcaacgttgcagatcc 10237189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 17249156 - 17249120
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  17249156 attcaatcaatgatttggacgtcaacgttgcagatcc 17249120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 30400044 - 30399992
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtattt 392  Q
    ||||||||||||||||||  |||||||||||| |||||||   ||||||||||    
T  30400044 attcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtattt 30399992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 32448628 - 32448592
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  32448628 attcaatcaatgatttggacgtcaacgttgcagatcc 32448592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 37876615 - 37876531
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||| ||||   ||||||||||| |||||||   ||| |||||||  | |||| ||||||||||||||||||||||    
T  37876615 attcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtag 37876531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 425
Target Start/End: Complemental strand, 19100672 - 19100542
Alignment:
Q  295 ttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttca 394  Q
    |||||||  ||||||||||||||| ||| ||||||||||  | ||||||||||||||||||| |  |||||||| || |||  |||| ||||||||| ||    
T  19100672 ttgtcttggtacggtgttcatttgattcctattgaaagagtggttattcaatcaatgatttgaacatcaacgttccagatcttaagacatgagtattcca 19100573  T
Q  395 cttacttcaattttatcatattatttgtaga 425  Q
     | |||| |||||||||||||||||||||||    
T  19100572 gtcactttaattttatcatattatttgtaga 19100542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 259 - 392
Target Start/End: Complemental strand, 7613129 - 7612996
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| | |||||||||| || | ||||| || ||||||||||||| ||||||||||||||||| |||||||||  | |||| ||     
T  7613129 tgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgattattcaatttaagattgggg 7613030  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtattt 392  Q
    ||||||| ||||| ||||||||  ||||||||||    
T  7613029 tgtcaacattgcagatccgaaggcatgagtattt 7612996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 380
Target Start/End: Complemental strand, 43261890 - 43261769
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||| ||  ||||||||||| |||  ||||| || ||||||| ||||| |||||||||||| |||| |||||||||||| |||||||     
T  43261890 tgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattcaatcaaagatttggg 43261791  T
Q  359 tgtcaacgttgcaaatccgaag 380  Q
     ||||| |||||| ||||||||    
T  43261790 agtcaaagttgcagatccgaag 43261769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 371
Target Start/End: Complemental strand, 3271461 - 3271361
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    ||||||| || ||||||||| |||  |||||  | ||||||||||||| ||||||||||||||||  ||||| |||||| |||||||| |||||||||||    
T  3271461 tcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatccattatttaatcaaagatttggacgtcaacgttgc 3271362  T
Q  371 a 371  Q
    |    
T  3271361 a 3271361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 11192434 - 11192542
Alignment:
Q  315 tttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcata 414  Q
    ||||||||||||||||||| |  ||||||||| |||||||||| ||||||||||| | ||||| | | |||||||||||  | |||| || |||||| ||    
T  11192434 tttggttcatattgaaagaccagttattcaataaatgatttgggtgtcaacgttgtagatccggaaacatgagtatttcgatcactttaaatttatcgta 11192533  T
Q  415 ttatttgta 423  Q
    |||||||||    
T  11192534 ttatttgta 11192542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 27266883 - 27266812
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| |||||    
T  27266883 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgaccgtcaacgttgcagatccg 27266812  T

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Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 34881773 - 34881844
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| |||||||  |||||||||||| |||||    
T  34881773 cggtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggcgtcaacgttgcagatccg 34881844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 2057862 - 2057792
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||   |||||||||||| ||||    
T  2057862 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgttgcagatcc 2057792  T

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Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 371
Target Start/End: Original strand, 4954038 - 4954112
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||| || ||||||||||||  ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  4954038 gtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgca 4954112  T

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Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 19259836 - 19259766
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||| ||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| ||||    
T  19259836 cggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatcc 19259766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 19281016 - 19280898
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| ||||||| || ||||||||  |||   |||| || | ||||||||||  ||| ||||||||||||| |||||||||||| ||||||||    
T  19281016 tgttgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaaagatcgattattcaatcaaagatttgga 19280917  T
Q  359 tgtcaacgttgcaaatccg 377  Q
     |||||||||||| |||||    
T  19280916 cgtcaacgttgcagatccg 19280898  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 41184463 - 41184393
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||| |||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  41184463 ggtgttcgtttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 41184393  T

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Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 15571566 - 15571651
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtaga 425  Q
    |||||||||||||||||| ||||||||||||| ||||| |   ||||||| |||| | |||| |||||||||||||||||| ||||    
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttataga 15571651  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 381
Target Start/End: Original strand, 42886535 - 42886607
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaaga 381  Q
    ||||||||||| |||||||| |||||||| |||||||||||| ||||| || |||||||||||| |||||||||    
T  42886535 gtgttcatttgattcatattaaaagatcgattattcaatcaaagattt-gacgtcaacgttgcagatccgaaga 42886607  T

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Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 16981336 - 16981416
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || |||||||| |||| ||||||||||||||||| |||||||||||| |||||||  |||| ||||||| |||||    
T  16981336 gtcttcttgcggtgttcctttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcatcgttgcagatccg 16981416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 371
Target Start/End: Complemental strand, 35475383 - 35475297
Alignment:
Q  284 tgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||| || | ||||| || ||||||||||||| |||||||| |||||||| |||||||||||| |||||||  ||||||||||||    
T  35475383 tgtttgatttctcgtcttcttgcggtgttcatttgattcatatt-aaagatcgattattcaatcaaagatttgggcgtcaacgttgca 35475297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 377
Target Start/End: Original strand, 42579919 - 42580014
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| ||| ||||||  | | ||||||||||  |||||||| |||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  42579919 gttgtttgattttctgtcttcgtgcagtgttcattttattcatatttaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 42580014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 26578309 - 26578378
Alignment:
Q  308 gtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||| ||||||||||||||||| || ||||||||| |||||||  ||||| |||||| |||||    
T  26578309 gtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaatgttgcagatccg 26578378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 30371781 - 30371846
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||||  ||||||||||||||||| || ||||||||| |||||||| |||||| |||||    
T  30371781 cggtgttcatttaattcatattgaaagatcgattgttcaatcaaagatttggacgtcaacattgca 30371846  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 7150368 - 7150288
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  |||  |||||||||||  |||||||||||| |||||||| |||||||||||| |||||    
T  7150368 gtcttcttgcggtgttcattttattcccattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccg 7150288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 18677513 - 18677446
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    ||||||||| |||  |||||  ||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  18677513 gttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatcgattatttaatcaa 18677446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 371
Target Start/End: Complemental strand, 27576383 - 27576309
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||| || ||||||||||||  || |||||||||||||| |||||||||||| |||||||   |||||||||||    
T  27576383 gtcttgttgcggtgttcatttattttatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgca 27576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 7241828 - 7241909
Alignment:
Q  296 tgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||| || ||||||||||||  ||| |||||| |||||| |||| ||||||| |||||| | |||||||||||| |||||    
T  7241828 tgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccg 7241909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 377
Target Start/End: Original strand, 7247004 - 7247085
Alignment:
Q  296 tgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||| || ||||||||||||  ||| |||||| |||||| |||| ||||||| |||||| | |||||||||||| |||||    
T  7247004 tgtcttcttgcggtgttcattttattcctattgatagatcgattatacaatcaaagatttgaacgtcaacgttgcagatccg 7247085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 13468648 - 13468772
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcact 396  Q
    ||||| || ||||||||||||||||| |||   ||||||| ||||||||||||||||| |  ||||||||||||| || || | | || |||||||   |    
T  13468648 gtcttgtttcggtgttcatttggttcttat---aagatcggttattcaatcaatgattcgagtgtcaacgttgcagattcggaaacatcagtattttgat 13468744  T
Q  397 tacttcaattttatcatattatttgtag 424  Q
     |||| | |||||||||||||| |||||    
T  13468745 cactttagttttatcatattatgtgtag 13468772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 6216978 - 6217062
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  |||||||||||| || || |   ||| |||||||  | |||| ||||||||||||||||||||||    
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtag 6217062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 11768062 - 11768126
Alignment:
Q  311 ttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatc 375  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||   ||||| ||||||||||    
T  11768062 ttcatttaattcatattgaaagatcgattattcaatcaaagatttgagcgtcaatgttgcaaatc 11768126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 13007309 - 13007393
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  13007309 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 13007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 415
Target Start/End: Original strand, 15570965 - 15571072
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatt 406  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||  | ||||| || ||||||||| ||||| ||  ||| ||||| || | |||| ||||    
T  15570965 ggtgttcatttgattcatattgaa-gatctattattcaatcaaataattggacgttaacgttgcacatccggagtcatgtgtattccagtcactttaatt 15571063  T
Q  407 ttatcatat 415  Q
    |||||||||    
T  15571064 ttatcatat 15571072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 369
Target Start/End: Complemental strand, 20257728 - 20257656
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||| || ||||||||||||| |||||||||||  |||| |||||||||||| ||||||   ||||||||||    
T  20257728 gtcttgttgcggtgttcatttgattcatattgaagtatcgattattcaatcaaagatttgcgcgtcaacgttg 20257656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 429
Target Start/End: Original strand, 28097161 - 28097328
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||| ||||| | |||||  ||||||||||| || | |||||  || |||||||||||||||||  |||||||||||    |||||||||||||||| |    
T  28097161 tgttggttgtcgttttgtgcggtgttgtttgatttctcgtcttcctatggtgttcatttggttcacgttgaaagatcg---gttcaatcaatgatttgaa 28097257  T
Q  359 tgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
     |||||| | ||| ||||| |||||   ||||   | | ||||  ||||||||||||||||||||| ||||    
T  28097258 cgtcaacatagcagatccggagataaatgtatgctattaacttacattttatcatattatttgtagttatt 28097328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 371
Target Start/End: Original strand, 30298216 - 30298327
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | | ||||||| |||  ||||| || ||||||| ||||| ||||||||||| ||| | |||||||||||| |||||||     
T  30298216 tgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa-gattgattattcaatcaaagatttggg 30298314  T
Q  359 tgtcaacgttgca 371  Q
     ||||||||||||    
T  30298315 cgtcaacgttgca 30298327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 38597877 - 38597961
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||| | ||||   ||||||||||||||||||||    
T  38597877 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtag 38597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 19983378 - 19983316
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    |||||||||||| ||||| |||  |||| | ||||||||||||| |||| |||||||||||||    
T  19983378 ggtgttcatttgcttcatgttgggagattggttattcaatcaataattttgatgtcaacgttg 19983316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 8088220 - 8088184
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  8088220 attcaatcaatgatttggacgtcaacgttgcagatcc 8088184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 10722841 - 10722925
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  |||||||||| | |||| ||   ||| |||||||  | ||||  |||||||||||||||||||||    
T  10722841 attcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtag 10722925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 34945473 - 34945553
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattattt 420  Q
    |||||| |||||||||||| |||||||||||| ||||| |   ||| |||||||  | |||| | ||||||||||||||||    
T  34945473 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattattt 34945553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 34800 - 34686
Alignment:
Q  310 gttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaatttta 409  Q
    ||||||||| ||||||||||||||||   ||| |||||||||||||    |||||||||||||||||| ||| |||||| || || | |||| |||||||    
T  34800 gttcatttgattcatattgaaagatctactatgcaatcaatgatttatgcgtcaacgttgcaaatccggagacatgagttttccagtcactttaatttta 34701  T
Q  410 tcatattatttgtag 424  Q
    |||||||||||||||    
T  34700 tcatattatttgtag 34686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 8745 - 8815
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||| ||||||||||||||||| |||||||||||| |||||||  |||||||||||| |||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 8815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 376
Target Start/End: Original strand, 8496973 - 8497090
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| |||||||||||  | ||||||||| || | |||||  | ||||||||||||| ||||||||||||||||| || ||||||||| |||||||     
T  8496973 tgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttggg 8497072  T
Q  359 tgtcaacgttgcaaatcc 376  Q
     | |||||||||| ||||    
T  8497073 cggcaacgttgcagatcc 8497090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 12652997 - 12653062
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||||  ||||||||||||    
T  12652997 cggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgca 12653062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 16419202 - 16419282
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || ||||||||||||  |||||||||||| |||| |||||||||||| |||||||| |||||||||||| |||||    
T  16419202 gtcttcttgcggtgttcattttattcatattgaaaaatcgattattcaatcaaagatttggacgtcaacgttgcagatccg 16419282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 25337499 - 25337659
Alignment:
Q  183 atttcaacctaaataaatgatttgtatatagatttagattttttacttcgtgatt-cgtcgtctgattgtgtcattatgttgtttgtcatcttgtgtagt 281  Q
    ||||||| |||||||||||||||  | ||| || ||| |||||| |||||||||| |||| || || ||||    | ||||||| ||| ||||| |  ||    
T  25337499 atttcaatctaaataaatgattttcacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggt 25337598  T
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttatt 342  Q
    ||||||||| |||| ||||| || ||||||||||||| ||||||||||||||||| |||||    
T  25337599 gttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatcgattatt 25337659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 380
Target Start/End: Original strand, 35001634 - 35001717
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    ||||| || ||||||||||||  ||| ||||||||||||  |||||||||||| |||||||| |||||||||||| ||||||||    
T  35001634 gtcttcttgcggtgttcattttattcctattgaaagatcaattattcaatcaaagatttggacgtcaacgttgcagatccgaag 35001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 377
Target Start/End: Original strand, 33110629 - 33110735
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    |||||||  ||||||||||| || | |||||  | ||||||||||||| |||||||| |||||||| |||||||||||| ||||| |  |||||||||||    
T  33110629 tcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaaagattttggcgtcaacgttgc 33110728  T
Q  371 aaatccg 377  Q
    | |||||    
T  33110729 agatccg 33110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 4984590 - 4984526
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||||||||||| ||||||||||||||||| |||||||||||| |||||||   |||||||||||    
T  4984590 ggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcatcaacgttgca 4984526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 380
Target Start/End: Complemental strand, 8028144 - 8028068
Alignment:
Q  304 tacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaag 380  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| |||||||  || ||| ||||| ||||||||    
T  8028144 tacggtgttcatttgattcatattaaaagatcggttattcaatcaaagatttgggcgttaacattgcagatccgaag 8028068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 7881126 - 7881055
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| ||| ||||||||||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  7881126 cggtgttcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 7881055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 25064289 - 25064360
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| ||||||   |||||||||||| |||||    
T  25064289 cggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgagcgtcaacgttgcagatccg 25064360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 33543691 - 33543575
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttgga 358  Q
    ||||||| ||| |||||||  | ||||||||| ||| |||||| || |||||||||||   |||||||||||||||||  |||||||||||  ||||||     
T  33543691 tgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatta--ttcatattgaaagatcgactattcaatcaaaaatttggg 33543594  T
Q  359 tgtcaacgttgcaaatccg 377  Q
    |||||| |||||| |||||    
T  33543593 tgtcaatgttgcagatccg 33543575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 4468576 - 4468681
Alignment:
Q  271 tcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgc 370  Q
    ||||||| || ||||||||| |||  |||||  | | ||||||||||| || |||||||| ||||| |||||||||||| |||||||  |||||||||||    
T  4468576 tcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaaggatcgattattcaatcaaagatttggccgtcaacgttgc 4468675  T
Q  371 aaatcc 376  Q
    | ||||    
T  4468676 agatcc 4468681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 377
Target Start/End: Complemental strand, 17237318 - 17237239
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||| || |||||||||| || ||||| ||||| ||||| |||||||||||| ||||||| ||||||||||||| |||||    
T  17237318 gtcttcttgcggtgttcatctgattcattttgaa-gatcgattattcaatcaaagatttgggtgtcaacgttgcagatccg 17237239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 23128700 - 23128784
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||||||||||||||||||||||||||| | ||||| |   ||| |||||||  | |||| | ||||||||||||||||||||    
T  23128700 attcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 23128784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 7876068 - 7875997
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||| ||| |||||||| |||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  7876068 cggtgttcaattgattcatattaaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 7875997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 12165892 - 12165963
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||  ||||||||||||||| | |||||||||| | |||||||  |||||||||||| |||||    
T  12165892 cggtgttcatttaattcatattgaaagattgattattcaatcgaagatttgggcgtcaacgttgcagatccg 12165963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 23947342 - 23947271
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| ||||||||||||||||| | || ||||||| |||||||  ||||| |||||| |||||    
T  23947342 cggtgttcatttgattcatattgaaagatcgataatccaatcaacgatttgggcgtcaatgttgcagatccg 23947271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 33740602 - 33740531
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| || |||||||||||||| |||||||||| | ||||||   |||||||||||| |||||    
T  33740602 cggtgttcatttgatttatattgaaagatcgattattcaatcgaagatttgagcgtcaacgttgcagatccg 33740531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 10228733 - 10228803
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||  ||  ||||||||||| | |||||||||||| |||||||| |||||||||||| |||||    
T  10228733 ggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccg 10228803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 377
Target Start/End: Original strand, 30493613 - 30493651
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  30493613 tattcaatcaatgatttggacgtcaacgttgcaaatccg 30493651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 606286 - 606370
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| ||||||||||||  ||||||||||| ||||| | | ||| |||||||  | |||| | ||||||||||||||||||||    
T  606286 attcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtag 606370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 425
Target Start/End: Complemental strand, 1704183 - 1704055
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcact 396  Q
    ||||| || |||||||||||||||||  || |||| |||| ||||||||| ||||||||| |  ||||||||| | ||||| |   |||| |||| || |    
T  1704183 gtcttgttgcggtgttcatttggttctaatcgaaatatcgattattcaataaatgatttgaacatcaacgttgtagatccggatgcatgaatattccagt 1704084  T
Q  397 tacttcaattttatcatattatttgtaga 425  Q
     |||| |||| ||||||||||||| ||||    
T  1704083 cactttaattgtatcatattatttataga 1704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 26588480 - 26588444
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||||| |||||||||||||||||||||||||||||    
T  26588480 attcaattaatgatttggatgtcaacgttgcaaatcc 26588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 29255454 - 29255370
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||||||||||  ||||||||| || ||||| | | ||| |||||||  | ||||  |||||||||||||||||||||    
T  29255454 attcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtag 29255370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 33053176 - 33053092
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||| | |||||||||||| ||||| |   ||| |||||||| | |||| | ||||||||||||||||||||    
T  33053176 attcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtag 33053092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 365
Target Start/End: Complemental strand, 4352020 - 4351961
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaac 365  Q
    |||| |||||||  ||||||||||||||||| ||||| |||||| |||||||| ||||||    
T  4352020 cggtattcatttaattcatattgaaagatcgattatttaatcaaagatttggacgtcaac 4351961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 8196431 - 8196368
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    ||||||||||||| ||| ||  ||||||||| |||||||||||| |||||||  ||||||||||    
T  8196431 cggtgttcatttgattcttacagaaagatcgattattcaatcaacgatttgggcgtcaacgttg 8196368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 429
Target Start/End: Original strand, 25398648 - 25398739
Alignment:
Q  338 ttattcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
    ||||||||||||||||||||  |||||||||||  ||||| ||| || ||| || |  | |||| |||||||||||||| ||||||| ||||    
T  25398648 ttattcaatcaatgatttgggcgtcaacgttgctgatccggagacataagttttccgatcactttaattttatcatattgtttgtaggtatt 25398739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 379
Target Start/End: Complemental strand, 27097650 - 27097611
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaa 379  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  27097650 attcaatcaatgatttggacgtcaacattgcaaatccgaa 27097611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 28635145 - 28635074
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||| |||||||||||||||   |||||||||||| ||||||   ||||| |||||| |||||    
T  28635145 cggtgttcatttgattcatattgaaagattaattattcaatcaaagatttgagcgtcaatgttgcagatccg 28635074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 356
Target Start/End: Complemental strand, 20980084 - 20980034
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttg 356  Q
    ||||||||||||||||| | |||||| |||| ||||||||||||| |||||    
T  20980084 cggtgttcatttggttcttgttgaaatatcgattattcaatcaataatttg 20980034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 1933700 - 1933663
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  1933700 attcaatcaatgatttggacgtcaacgttgcagatccg 1933663  T

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Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 12170550 - 12170587
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  12170550 attcaagcaatgatttggatgtcaacgttgcagatccg 12170587  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 429
Target Start/End: Complemental strand, 3688908 - 3688749
Alignment:
Q  269 catcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgtt 368  Q
    |||||||||  || |||||||| |||| || || ||| ||||||  |||| ||  ||||||||||||  |||||| |||||||||||  | ||||| |||    
T  3688908 catcttgtgccgtattgtttgatttttcgtgttgttatggtgtttgtttgctttctattgaaagatctgttattcgatcaatgatttctacgtcaatgtt 3688809  T
Q  369 gcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtagatatt 429  Q
    | | ||  ||| |||||||||||  | | |||| |||||| ||||||||||| ||||||||    
T  3688808 gtagatttgaaaatatgagtattctaatcactt-aattttgtcatattatttatagatatt 3688749  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 4088516 - 4088584
Alignment:
Q  309 tgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||| ||| ||  ||||||||| || ||||||||| |||||||  |||||||||||| |||||    
T  4088516 tgttcatttgattcttacagaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccg 4088584  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 25092560 - 25092612
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtattt 392  Q
    |||||||||||||| ||  ||||||||||||||||   |||||||||||||||    
T  25092560 attcaatcaatgatatgtttgtcaacgttgcaaatataaagatatgagtattt 25092612  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 335
Target Start/End: Complemental strand, 26588575 - 26588499
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    ||||| ||||| |||||||  | ||||||||| ||   ||||| || |||||||| |||||||||||||||||||||    
T  26588575 tgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 335
Target Start/End: Original strand, 30493519 - 30493595
Alignment:
Q  259 tgttgtttgtcatcttgtgtagtgttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatc 335  Q
    ||||||| ||| ||||||| || ||||||||| ||  | |||| ||  ||||||| |||||||||||||||||||||    
T  30493519 tgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatc 30493595  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 379
Target Start/End: Complemental strand, 32191739 - 32191699
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccgaa 379  Q
    |||||||||||||||||||| | |||||||||| |||||||    
T  32191739 tattcaatcaatgatttggacgccaacgttgcatatccgaa 32191699  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 34018650 - 34018726
Alignment:
Q  348 aatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    ||||||||||  |||||||||||| ||||| |   |||||||||||| | ||||   ||||||||||||||||||||    
T  34018650 aatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtag 34018726  T

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Target: scaffold0426 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 6349 - 6428
Alignment:
Q  297 gtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatcc 376  Q
    ||||| || ||||||||||||| ||||||||||||||||| ||||||||||||  ||||||   ||||||||||| ||||    
T  6349 gtcttcttgcggtgttcatttgattcatattgaaagatcgattattcaatcaaatatttgggcatcaacgttgcagatcc 6428  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 83462 - 83397
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgca 371  Q
    |||| |||||||| ||||||||||||||||| |||||||||| | |||||||  ||||||||||||    
T  83462 cggtattcatttgattcatattgaaagatcgattattcaatcgaagatttggccgtcaacgttgca 83397  T

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Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 377
Target Start/End: Complemental strand, 16344 - 16273
Alignment:
Q  306 cggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    ||||||| ||||| |||||||| ||| |||| |||||||||||| |||||||  |||||||||||| |||||    
T  16344 cggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttgcagatccg 16273  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 453961 - 454028
Alignment:
Q  282 gttgtttgaatttttgtcttattacggtgttcatttggttcatattgaaagatcgtttattcaatcaa 349  Q
    ||||||||| |||  ||||| || |||||||||||||  |||||||||||||||| ||||||||||||    
T  453961 gttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattcaatcaa 454028  T

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Target: scaffold0495 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 5452 - 5522
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||  ||  ||||||||||| | |||||||||||| |||||||| |||||||||||| |||||    
T  5452 ggtgttcattttatttctattgaaagattgattattcaatcaaagatttggacgtcaacgttgcagatccg 5522  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 201395 - 201334
Alignment:
Q  307 ggtgttcatttggttcatattgaaagatcgtttattcaatcaatgatttggatgtcaacgttg 369  Q
    |||||||||||| ||||||||||| ||||| |||||||||||| |||||||  ||||||||||    
T  201395 ggtgttcatttgattcatattgaa-gatcgattattcaatcaaagatttgggcgtcaacgttg 201334  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 32755 - 32671
Alignment:
Q  340 attcaatcaatgatttggatgtcaacgttgcaaatccgaagatatgagtatttcacttacttcaattttatcatattatttgtag 424  Q
    |||||| |||||||||||| |||||||||||| ||| | |   |||||||||||  | ||||  |||||||||||||||||||||    
T  32755 attcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtag 32671  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 377
Target Start/End: Original strand, 6110 - 6148
Alignment:
Q  339 tattcaatcaatgatttggatgtcaacgttgcaaatccg 377  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  6110 tattcaatcaatgatttggatgtcaatgttgcagatccg 6148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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