View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7639_low_8 (Length: 404)

Name: NF7639_low_8
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7639_low_8
NF7639_low_8
[»] chr1 (81 HSPs)
chr1 (18-329)||(42534250-42534562)
chr1 (136-263)||(5735012-5735140)
chr1 (136-246)||(19017628-19017739)
chr1 (135-245)||(36694280-36694391)
chr1 (135-245)||(36710381-36710492)
chr1 (137-263)||(46899061-46899188)
chr1 (135-247)||(30711644-30711757)
chr1 (136-248)||(6367878-6367991)
chr1 (140-248)||(40210373-40210482)
chr1 (136-263)||(46899901-46900029)
chr1 (136-248)||(1103777-1103890)
chr1 (136-248)||(17661851-17661963)
chr1 (137-248)||(26024708-26024820)
chr1 (135-248)||(13914066-13914180)
chr1 (136-248)||(48779435-48779548)
chr1 (137-244)||(24009575-24009683)
chr1 (137-244)||(32917580-32917688)
chr1 (135-246)||(37578190-37578302)
chr1 (137-248)||(47999123-47999235)
chr1 (138-276)||(4960541-4960680)
chr1 (135-248)||(43759138-43759252)
chr1 (137-248)||(183221-183333)
chr1 (135-246)||(19322890-19323002)
chr1 (140-243)||(23209365-23209468)
chr1 (141-247)||(41099050-41099157)
chr1 (144-244)||(49723046-49723147)
chr1 (135-248)||(1841775-1841888)
chr1 (137-266)||(40772507-40772637)
chr1 (136-248)||(7821270-7821382)
chr1 (136-276)||(37578480-37578621)
chr1 (161-248)||(4960825-4960913)
chr1 (136-243)||(7231570-7231678)
chr1 (137-276)||(34850353-34850493)
chr1 (139-266)||(42248475-42248603)
chr1 (140-246)||(19323210-19323317)
chr1 (140-257)||(17692492-17692610)
chr1 (135-248)||(35473629-35473743)
chr1 (135-250)||(5734008-5734123)
chr1 (137-276)||(6367562-6367702)
chr1 (135-266)||(34464747-34464879)
chr1 (137-276)||(34849011-34849151)
chr1 (135-266)||(36694546-36694678)
chr1 (135-266)||(36710647-36710779)
chr1 (136-262)||(17691218-17691345)
chr1 (137-247)||(34464449-34464560)
chr1 (139-276)||(40210658-40210796)
chr1 (135-272)||(41098731-41098869)
chr1 (136-276)||(17662138-17662279)
chr1 (130-202)||(19515812-19515885)
chr1 (135-203)||(23209688-23209757)
chr1 (135-266)||(19017927-19018059)
chr1 (137-276)||(31197065-31197200)
chr1 (138-203)||(13300265-13300331)
chr1 (138-203)||(35152691-35152757)
chr1 (163-245)||(42248790-42248871)
chr1 (146-266)||(14878980-14879101)
chr1 (160-276)||(48691171-48691288)
chr1 (135-186)||(35152341-35152393)
chr1 (140-203)||(40435348-40435412)
chr1 (137-203)||(14879319-14879386)
chr1 (140-266)||(24009839-24009966)
chr1 (136-266)||(26024422-26024553)
chr1 (137-266)||(30711327-30711457)
chr1 (138-243)||(48692335-48692441)
chr1 (141-266)||(1103463-1103591)
chr1 (135-266)||(1841457-1841589)
chr1 (136-203)||(40772820-40772888)
chr1 (140-247)||(46163033-46163141)
chr1 (135-266)||(47999390-47999522)
chr1 (138-276)||(13914355-13914494)
chr1 (136-186)||(25647883-25647934)
chr1 (219-266)||(31514584-31514631)
chr1 (227-286)||(40435436-40435495)
chr1 (226-276)||(13295225-13295275)
chr1 (218-248)||(35152659-35152689)
chr1 (139-214)||(40439539-40439615)
chr1 (135-183)||(42533022-42533071)
chr1 (136-212)||(51019701-51019778)
chr1 (218-266)||(28011445-28011493)
chr1 (135-248)||(32133239-32133354)
chr1 (135-186)||(51015631-51015683)
[»] chr2 (43 HSPs)
chr2 (135-325)||(44045241-44045432)
chr2 (137-263)||(25230102-25230229)
chr2 (135-248)||(15848404-15848518)
chr2 (136-248)||(36382443-36382556)
chr2 (136-244)||(37895346-37895455)
chr2 (137-248)||(10713039-10713151)
chr2 (137-248)||(11163054-11163166)
chr2 (136-266)||(3555249-3555380)
chr2 (135-248)||(39423831-39423945)
chr2 (136-248)||(36755404-36755517)
chr2 (135-243)||(39498600-39498709)
chr2 (133-248)||(34448111-34448227)
chr2 (141-248)||(44713799-44713907)
chr2 (136-243)||(45556368-45556476)
chr2 (136-238)||(2318836-2318939)
chr2 (137-247)||(9076384-9076495)
chr2 (135-276)||(25231136-25231278)
chr2 (139-248)||(36480034-36480144)
chr2 (140-248)||(6588686-6588795)
chr2 (148-248)||(13692536-13692637)
chr2 (136-248)||(16099340-16099453)
chr2 (137-248)||(6658163-6658275)
chr2 (137-276)||(21370490-21370630)
chr2 (136-276)||(44044113-44044254)
chr2 (137-244)||(3556329-3556437)
chr2 (132-266)||(11163321-11163456)
chr2 (138-251)||(2318160-2318273)
chr2 (137-244)||(6307038-6307145)
chr2 (137-266)||(30729621-30729751)
chr2 (135-276)||(36382159-36382301)
chr2 (227-276)||(3653368-3653417)
chr2 (136-276)||(15848087-15848228)
chr2 (140-276)||(37895635-37895772)
chr2 (227-265)||(11349504-11349542)
chr2 (139-266)||(36479719-36479848)
chr2 (138-266)||(36755094-36755223)
chr2 (136-203)||(45556111-45556179)
chr2 (227-277)||(6848021-6848071)
chr2 (139-276)||(10712725-10712863)
chr2 (226-276)||(25623378-25623428)
chr2 (137-202)||(39423515-39423581)
chr2 (134-186)||(6657875-6657928)
chr2 (226-266)||(25624403-25624443)
[»] chr4 (75 HSPs)
chr4 (134-276)||(24349671-24349814)
chr4 (136-247)||(17355924-17356036)
chr4 (135-263)||(148056-148185)
chr4 (140-248)||(37976156-37976265)
chr4 (135-262)||(10781786-10781914)
chr4 (135-248)||(51692835-51692949)
chr4 (135-247)||(35027996-35028109)
chr4 (137-276)||(147319-147459)
chr4 (135-248)||(34765378-34765492)
chr4 (139-248)||(44967071-44967181)
chr4 (136-244)||(1179120-1179229)
chr4 (136-248)||(24350748-24350861)
chr4 (137-248)||(7452119-7452231)
chr4 (140-243)||(11108161-11108265)
chr4 (135-248)||(52909569-52909683)
chr4 (137-244)||(18831637-18831745)
chr4 (136-246)||(53129505-53129616)
chr4 (135-248)||(36008842-36008956)
chr4 (135-248)||(50418666-50418780)
chr4 (135-276)||(55867402-55867544)
chr4 (136-244)||(10780712-10780821)
chr4 (136-244)||(10974321-10974430)
chr4 (136-248)||(13058298-13058411)
chr4 (140-248)||(37248521-37248630)
chr4 (136-248)||(46661230-46661343)
chr4 (140-248)||(54086698-54086807)
chr4 (137-248)||(14802051-14802163)
chr4 (138-248)||(15507674-15507785)
chr4 (138-248)||(49879208-49879319)
chr4 (136-276)||(14801735-14801876)
chr4 (135-247)||(24711397-24711510)
chr4 (118-276)||(34765668-34765824)
chr4 (140-243)||(43155532-43155636)
chr4 (160-248)||(54713653-54713741)
chr4 (137-243)||(23613599-23613706)
chr4 (135-248)||(39539234-39539348)
chr4 (135-231)||(24411681-24411778)
chr4 (128-276)||(41583519-41583668)
chr4 (139-266)||(17356220-17356348)
chr4 (213-285)||(54434266-54434337)
chr4 (136-266)||(11448027-11448158)
chr4 (136-273)||(24711110-24711248)
chr4 (135-251)||(51692551-51692668)
chr4 (138-266)||(52909254-52909383)
chr4 (137-248)||(5369183-5369295)
chr4 (135-266)||(50418935-50419067)
chr4 (136-266)||(23613308-23613439)
chr4 (135-203)||(13058035-13058104)
chr4 (134-266)||(44967336-44967469)
chr4 (227-276)||(56014816-56014865)
chr4 (136-203)||(5368946-5369014)
chr4 (171-243)||(35508278-35508348)
chr4 (137-188)||(55866111-55866163)
chr4 (136-186)||(53702176-53702227)
chr4 (227-265)||(41582538-41582576)
chr4 (136-197)||(48528484-48528546)
chr4 (139-203)||(16006154-16006219)
chr4 (227-276)||(56015935-56015984)
chr4 (136-203)||(1178056-1178123)
chr4 (218-266)||(4982993-4983041)
chr4 (135-186)||(7451832-7451884)
chr4 (139-266)||(15507971-15508098)
chr4 (135-266)||(37976451-37976583)
chr4 (139-266)||(54086993-54087121)
chr4 (218-277)||(8439511-8439570)
chr4 (136-250)||(30642460-30642575)
chr4 (226-276)||(16605692-16605742)
chr4 (227-265)||(40388405-40388443)
chr4 (135-183)||(35508621-35508670)
chr4 (136-276)||(40387466-40387607)
chr4 (136-184)||(53129886-53129935)
chr4 (218-247)||(53702129-53702158)
chr4 (136-203)||(18831348-18831416)
chr4 (218-266)||(27934614-27934662)
chr4 (135-167)||(53477150-53477182)
[»] chr3 (54 HSPs)
chr3 (135-276)||(9367739-9367881)
chr3 (137-278)||(3850413-3850555)
chr3 (135-248)||(40758426-40758540)
chr3 (137-248)||(36418004-36418116)
chr3 (141-263)||(41558183-41558306)
chr3 (140-248)||(26463635-26463744)
chr3 (134-248)||(19740920-19741035)
chr3 (136-248)||(3849030-3849143)
chr3 (136-248)||(33689381-33689493)
chr3 (140-248)||(42343047-42343156)
chr3 (146-248)||(23457988-23458091)
chr3 (138-248)||(53757039-53757150)
chr3 (135-276)||(33689667-33689809)
chr3 (140-248)||(36417691-36417800)
chr3 (135-247)||(41558006-41558119)
chr3 (140-248)||(46475097-46475205)
chr3 (135-266)||(23458277-23458409)
chr3 (139-248)||(43384599-43384709)
chr3 (140-266)||(46474818-46474945)
chr3 (135-210)||(51993962-51994038)
chr3 (136-277)||(25107212-25107354)
chr3 (135-266)||(40033754-40033886)
chr3 (136-263)||(53856358-53856486)
chr3 (137-266)||(9294256-9294386)
chr3 (140-265)||(53756747-53756873)
chr3 (135-266)||(2796177-2796309)
chr3 (136-266)||(19741190-19741321)
chr3 (227-286)||(21783773-21783832)
chr3 (138-276)||(25108383-25108522)
chr3 (137-203)||(40758147-40758214)
chr3 (138-276)||(51994174-51994313)
chr3 (138-203)||(35712045-35712111)
chr3 (138-266)||(23276281-23276410)
chr3 (227-276)||(40758235-40758284)
chr3 (160-244)||(42855625-42855710)
chr3 (135-243)||(47856385-47856494)
chr3 (139-186)||(9292245-9292293)
chr3 (135-186)||(42342789-42342841)
chr3 (135-249)||(1079536-1079651)
chr3 (136-202)||(2796459-2796526)
chr3 (136-186)||(26463964-26464015)
chr3 (140-186)||(36150530-36150577)
chr3 (226-276)||(29192125-29192175)
chr3 (226-276)||(32717065-32717115)
chr3 (137-186)||(34142596-34142646)
chr3 (227-273)||(55052539-55052585)
chr3 (135-203)||(23272822-23272891)
chr3 (227-276)||(33156282-33156331)
chr3 (218-247)||(40033588-40033617)
chr3 (191-243)||(9294013-9294065)
chr3 (218-266)||(10770758-10770806)
chr3 (140-214)||(21783403-21783476)
chr3 (218-266)||(36314565-36314613)
chr3 (218-266)||(48322644-48322692)
[»] chr8 (61 HSPs)
chr8 (137-276)||(20385568-20385708)
chr8 (135-247)||(13186376-13186489)
chr8 (140-248)||(38862879-38862988)
chr8 (136-262)||(20386732-20386859)
chr8 (135-248)||(12198948-12199062)
chr8 (135-248)||(12443376-12443490)
chr8 (136-248)||(8316652-8316765)
chr8 (135-263)||(30710854-30710982)
chr8 (136-248)||(36928792-36928905)
chr8 (139-247)||(40317966-40318075)
chr8 (139-250)||(34177284-34177396)
chr8 (137-247)||(34685575-34685685)
chr8 (137-266)||(2534695-2534825)
chr8 (139-248)||(12272920-12273030)
chr8 (135-248)||(39071958-39072071)
chr8 (135-247)||(4994655-4994768)
chr8 (168-248)||(35756898-35756978)
chr8 (137-248)||(38955988-38956100)
chr8 (141-247)||(36186105-36186212)
chr8 (135-248)||(1425051-1425165)
chr8 (138-263)||(30712018-30712143)
chr8 (138-263)||(30719795-30719920)
chr8 (135-266)||(34176443-34176571)
chr8 (134-248)||(23663542-23663657)
chr8 (138-266)||(7294103-7294231)
chr8 (136-276)||(13186059-13186200)
chr8 (135-234)||(33357496-33357596)
chr8 (137-248)||(23698308-23698421)
chr8 (137-266)||(39071676-39071806)
chr8 (134-266)||(23663812-23663945)
chr8 (137-276)||(31608801-31608941)
chr8 (137-266)||(4405958-4406088)
chr8 (135-244)||(7295247-7295357)
chr8 (138-266)||(11762974-11763103)
chr8 (135-203)||(16388581-16388650)
chr8 (137-276)||(16388814-16388954)
chr8 (135-266)||(34060487-34060619)
chr8 (136-266)||(8316886-8317017)
chr8 (137-276)||(36928479-36928616)
chr8 (174-247)||(22915427-22915500)
chr8 (136-248)||(34061644-34061757)
chr8 (135-266)||(23698542-23698674)
chr8 (218-277)||(8747551-8747610)
chr8 (136-266)||(22915656-22915787)
chr8 (135-276)||(11761838-11761980)
chr8 (137-262)||(30459371-30459497)
chr8 (135-251)||(36186380-36186494)
chr8 (136-264)||(4994957-4995085)
chr8 (135-186)||(7313383-7313435)
chr8 (139-186)||(9065667-9065715)
chr8 (218-266)||(12199217-12199265)
chr8 (135-266)||(12273151-12273283)
chr8 (218-266)||(12443645-12443693)
chr8 (136-186)||(7306398-7306449)
chr8 (137-203)||(38955703-38955770)
chr8 (137-186)||(42803596-42803646)
chr8 (137-277)||(8746324-8746465)
chr8 (136-248)||(40318280-40318393)
chr8 (218-266)||(11674777-11674824)
chr8 (135-186)||(35756582-35756633)
chr8 (218-266)||(36325316-36325364)
[»] chr6 (33 HSPs)
chr6 (135-276)||(681016-681158)
chr6 (135-263)||(13379783-13379912)
chr6 (136-263)||(679865-679993)
chr6 (133-248)||(20651006-20651122)
chr6 (139-276)||(11434804-11434942)
chr6 (135-248)||(12080952-12081066)
chr6 (135-248)||(30726075-30726189)
chr6 (136-244)||(3059576-3059685)
chr6 (136-248)||(17734195-17734308)
chr6 (136-248)||(33517850-33517963)
chr6 (135-276)||(26463177-26463319)
chr6 (135-248)||(33647267-33647381)
chr6 (128-248)||(30804177-30804298)
chr6 (136-276)||(20651935-20652076)
chr6 (136-248)||(21627712-21627825)
chr6 (136-247)||(11393121-11393233)
chr6 (137-248)||(30337734-30337846)
chr6 (135-263)||(8090228-8090357)
chr6 (137-266)||(30725760-30725889)
chr6 (137-264)||(15116532-15116660)
chr6 (135-263)||(12408472-12408601)
chr6 (136-276)||(21628001-21628142)
chr6 (137-276)||(12407508-12407648)
chr6 (135-266)||(30337447-30337579)
chr6 (140-248)||(22617886-22617996)
chr6 (135-276)||(28498313-28498455)
chr6 (136-263)||(8089442-8089570)
chr6 (140-266)||(33517537-33517664)
chr6 (135-276)||(29810724-29810866)
chr6 (137-248)||(15115339-15115451)
chr6 (137-186)||(26464577-26464627)
chr6 (139-202)||(8418398-8418461)
chr6 (218-266)||(28000652-28000700)
[»] chr5 (78 HSPs)
chr5 (135-248)||(14194421-14194535)
chr5 (140-248)||(43159130-43159239)
chr5 (135-248)||(20814134-20814247)
chr5 (136-248)||(6301545-6301655)
chr5 (136-248)||(39453615-39453728)
chr5 (137-248)||(186735-186847)
chr5 (136-246)||(16083261-16083372)
chr5 (138-248)||(16156856-16156967)
chr5 (137-247)||(17202716-17202827)
chr5 (135-248)||(6150736-6150850)
chr5 (136-248)||(6301859-6301970)
chr5 (135-248)||(28269420-28269534)
chr5 (135-246)||(13963147-13963259)
chr5 (137-248)||(27587431-27587543)
chr5 (139-266)||(37992586-37992714)
chr5 (150-248)||(5994205-5994304)
chr5 (133-247)||(35512431-35512546)
chr5 (138-248)||(38442383-38442494)
chr5 (136-248)||(11762033-11762146)
chr5 (136-236)||(18247404-18247505)
chr5 (138-243)||(19517928-19518034)
chr5 (139-248)||(19892310-19892420)
chr5 (135-248)||(37991197-37991311)
chr5 (138-266)||(11741815-11741944)
chr5 (140-272)||(21257453-21257586)
chr5 (137-248)||(5024019-5024131)
chr5 (142-248)||(8322720-8322827)
chr5 (135-241)||(20840760-20840867)
chr5 (136-242)||(42265734-42265841)
chr5 (136-265)||(6150453-6150583)
chr5 (136-248)||(3528872-3528985)
chr5 (140-248)||(11047753-11047861)
chr5 (135-243)||(28770867-28770976)
chr5 (136-248)||(32242558-32242670)
chr5 (140-247)||(10684255-10684362)
chr5 (135-247)||(27937053-27937164)
chr5 (138-248)||(35920229-35920340)
chr5 (137-247)||(38475033-38475144)
chr5 (135-243)||(29646360-29646469)
chr5 (136-263)||(5835622-5835750)
chr5 (140-242)||(5835748-5835851)
chr5 (140-248)||(11740690-11740799)
chr5 (161-248)||(21265167-21265255)
chr5 (139-266)||(39453302-39453430)
chr5 (140-266)||(5024316-5024443)
chr5 (132-266)||(38475297-38475432)
chr5 (135-266)||(5993887-5994019)
chr5 (135-266)||(35512146-35512278)
chr5 (144-266)||(38442075-38442198)
chr5 (139-276)||(19892596-19892734)
chr5 (135-276)||(32242240-32242382)
chr5 (137-266)||(35920482-35920612)
chr5 (135-203)||(20814496-20814565)
chr5 (134-186)||(20840530-20840583)
chr5 (136-276)||(24547413-24547554)
chr5 (140-203)||(13362589-13362653)
chr5 (136-203)||(21265503-21265571)
chr5 (136-186)||(16157233-16157284)
chr5 (199-248)||(13362290-13362339)
chr5 (138-186)||(18247087-18247136)
chr5 (136-203)||(11761748-11761816)
chr5 (136-203)||(18670201-18670269)
chr5 (135-182)||(28269762-28269809)
chr5 (136-266)||(17202398-17202529)
chr5 (208-247)||(24547262-24547301)
chr5 (137-203)||(27587148-27587215)
chr5 (137-186)||(3529220-3529270)
chr5 (226-276)||(22869695-22869745)
chr5 (137-266)||(28771136-28771266)
chr5 (227-277)||(42063345-42063395)
chr5 (227-276)||(186510-186559)
chr5 (135-176)||(13362248-13362289)
chr5 (227-276)||(20857023-20857072)
chr5 (135-215)||(24547175-24547256)
chr5 (140-184)||(27937379-27937424)
chr5 (218-266)||(6758132-6758180)
chr5 (135-186)||(13962862-13962914)
chr5 (218-266)||(41930598-41930646)
[»] chr7 (64 HSPs)
chr7 (136-248)||(28469009-28469122)
chr7 (135-276)||(5457195-5457337)
chr7 (136-248)||(10936110-10936223)
chr7 (136-248)||(2640177-2640290)
chr7 (136-248)||(6253756-6253869)
chr7 (136-248)||(24389101-24389214)
chr7 (138-246)||(42019598-42019707)
chr7 (137-248)||(40380000-40380112)
chr7 (136-247)||(47945356-47945468)
chr7 (136-247)||(47950786-47950898)
chr7 (135-244)||(48788801-48788911)
chr7 (136-244)||(27396628-27396737)
chr7 (135-248)||(17102305-17102419)
chr7 (140-248)||(27992024-27992133)
chr7 (137-264)||(42362450-42362578)
chr7 (160-276)||(17885651-17885768)
chr7 (135-275)||(45010893-45011034)
chr7 (137-264)||(33808323-33808451)
chr7 (142-265)||(40379774-40379898)
chr7 (135-276)||(17886778-17886920)
chr7 (135-248)||(42731735-42731849)
chr7 (138-244)||(3914458-3914560)
chr7 (139-244)||(19204778-19204884)
chr7 (135-276)||(28469296-28469438)
chr7 (135-203)||(20426691-20426760)
chr7 (136-244)||(32053142-32053251)
chr7 (136-228)||(32298776-32298869)
chr7 (168-276)||(43124440-43124548)
chr7 (137-243)||(13386068-13386175)
chr7 (135-265)||(20425476-20425607)
chr7 (135-276)||(27396883-27397025)
chr7 (139-203)||(24388821-24388886)
chr7 (138-246)||(47946792-47946901)
chr7 (138-246)||(47952222-47952331)
chr7 (138-251)||(23181307-23181421)
chr7 (137-266)||(42731419-42731549)
chr7 (137-214)||(43123175-43123253)
chr7 (160-276)||(18087626-18087743)
chr7 (135-186)||(29144360-29144412)
chr7 (136-266)||(6571012-6571143)
chr7 (137-251)||(10935794-10935909)
chr7 (136-250)||(13384501-13384616)
chr7 (136-266)||(17102019-17102150)
chr7 (226-276)||(12644093-12644143)
chr7 (134-263)||(18086286-18086416)
chr7 (190-248)||(22871362-22871420)
chr7 (135-183)||(28105499-28105548)
chr7 (136-184)||(29141556-29141605)
chr7 (138-266)||(32299003-32299132)
chr7 (140-203)||(37656855-37656919)
chr7 (137-184)||(37657217-37657265)
chr7 (140-247)||(42019914-42020022)
chr7 (136-186)||(34793903-34793954)
chr7 (138-263)||(1960176-1960302)
chr7 (226-276)||(4226215-4226265)
chr7 (138-203)||(6253472-6253538)
chr7 (218-248)||(37657166-37657196)
chr7 (226-276)||(45914614-45914664)
chr7 (136-184)||(30127440-30127489)
chr7 (138-186)||(34799536-34799585)
chr7 (208-248)||(6571264-6571304)
chr7 (135-266)||(22828116-22828247)
chr7 (218-266)||(32680862-32680910)
chr7 (135-250)||(32688532-32688648)
[»] scaffold0707 (1 HSPs)
scaffold0707 (136-248)||(6395-6508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (137-248)||(69281-69393)
scaffold0031 (137-276)||(68965-69105)
[»] scaffold0075 (2 HSPs)
scaffold0075 (135-243)||(14427-14536)
scaffold0075 (137-203)||(14751-14818)
[»] scaffold0775 (1 HSPs)
scaffold0775 (135-248)||(4960-5074)
[»] scaffold0005 (2 HSPs)
scaffold0005 (137-248)||(37564-37676)
scaffold0005 (136-276)||(37851-37992)
[»] scaffold0007 (2 HSPs)
scaffold0007 (136-246)||(2059-2170)
scaffold0007 (135-266)||(1767-1899)
[»] scaffold0020 (2 HSPs)
scaffold0020 (140-248)||(139957-140066)
scaffold0020 (135-266)||(139670-139802)
[»] scaffold0128 (1 HSPs)
scaffold0128 (140-246)||(19860-19967)
[»] scaffold0347 (1 HSPs)
scaffold0347 (226-276)||(13699-13749)


Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 329
Target Start/End: Complemental strand, 42534562 - 42534250
Alignment:
Q  18 tcaatatcactcgaatttattgtcatggatattgttagactaataaatatataacaatcatctctttgaaaaaacacattctatttgtttcaatggaaat 117  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42534562 tcaataacactcaaatttattgtcatggatattgtttgactaataaatatataacaatcatctctttgaaaaaacacattctatttgtttcaatggaaat 42534463  T
Q  118 gtgtatatattatatactaggcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagtt 217  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || | |||||||| |||||||| |||||||  |    
T  42534462 gtgtatatattatatactaggtttaaatatgtatttcatctctacaattagggtcgtttaaaaattagtctctgtattcgttaatctttgcaaactaact 42534363  T
Q  218 ttgcaat-cattaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcagctaatcagtaaaatatggcttaaaagtacaaaaataccc 316  Q
    || |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42534362 ttacaatccattaatcatttaaaatttcgtcccacatcccagttaatcacggccacgtcagctaatcagtaaaatatggcttaaaagtacaaaaataccc 42534263  T
Q  317 cttgcaaatgacc 329  Q
    |||||||||||||    
T  42534262 cttgcaaatgacc 42534250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 5735140 - 5735012
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||  |||||||||||||| || ||||||||  || ||||||||||||||    
T  5735140 aggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaatcat 5735041  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||||| | ||||||||||    
T  5735040 ttaaaatttcgtccctgagcccagttaat 5735012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 19017628 - 19017739
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| | |||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  19017628 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaatccttacaaactagtcttgcaatcattaatcat 19017727  T
Q  235 ttaaaatttcgt 246  Q
    ||||||||||||    
T  19017728 ttaaaatttcgt 19017739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 36694280 - 36694391
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||| ||||||||||||||||    
T  36694280 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36694379  T
Q  234 tttaaaatttcg 245  Q
    ||||||||||||    
T  36694380 tttaaaatttcg 36694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 36710381 - 36710492
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||| ||||||||||||||||    
T  36710381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 36710480  T
Q  234 tttaaaatttcg 245  Q
    ||||||||||||    
T  36710481 tttaaaatttcg 36710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 46899061 - 46899188
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||  || |||||||| |||||||||||||||||||    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatt 46899160  T
Q  236 taaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||||||| | ||||||||||    
T  46899161 taaaatttcgtccctgagcccagttaat 46899188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 30711757 - 30711644
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||  ||||||||||||||||    
T  30711757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 30711658  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  30711657 tttaaaatttcgtc 30711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 6367991 - 6367878
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 6367892  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  6367891 ttaaaatttcgtcc 6367878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 40210373 - 40210482
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||| |||||||||||| ||||| |||||||||||||||| || ||||||||  |||||||||||||||||||||    
T  40210373 ttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatcatttaa 40210472  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  40210473 aatttcgtcc 40210482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 46900029 - 46899901
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||||   |||||||||||||  || ||||||||  |||||||||||||||||    
T  46900029 aggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatcat 46899930  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||||| | ||||||||||    
T  46899929 ttaaaatttcgtccctgagcccagttaat 46899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 1103890 - 1103777
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||| |||||||||  ||||||||  ||||||||||||||||||   |||||||||||||| || ||||||||| |||||||||||||||||    
T  1103890 aggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 1103791  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  1103790 ttaaaatttcgtcc 1103777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 17661851 - 17661963
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||  | ||||||||||||| || ||||||||  |||||||||||||||||    
T  17661851 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcct-gtattcgctaatccttgcaaactagcattgcaatcattaatcat 17661949  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  17661950 ttaaaatttcgtcc 17661963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 26024820 - 26024708
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| ||||||||| || ||||||||| ||||||||||||||||||    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatt 26024721  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  26024720 taaaatttcgtcc 26024708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 13914066 - 13914180
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||| |||||||||||  ||||||||||| ||||||||||||| ||   |||||||||||||| || |||| |||| ||||||||||||||||    
T  13914066 taggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaatccttgcaaattagtcttgcaatcattaatca 13914165  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  13914166 tttaaaatttcgtcc 13914180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 48779548 - 48779435
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||||| |||| ||||||||| ||   |||||| ||||||| || ||||||||| |||||||||||||||||    
T  48779548 aggcttaaatatgtatttcatccttgcaattaggagtcgcttaaaaattagtccatgtatttgctaatccttgcaaactagtcttgcaatcattaatcat 48779449  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  48779448 ttaaaatttcgtcc 48779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 24009575 - 24009683
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||  |||||||| |||||| || | ||||||  ||||||||||||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgccaactagccttgcaatcattaatcatt 24009674  T
Q  236 taaaatttc 244  Q
    |||||||||    
T  24009675 taaaatttc 24009683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 32917688 - 32917580
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||   |||||||| ||||||||||||||||||| | |||||||| ||||| || ||||||||  ||||||||||||||||||    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatt 32917589  T
Q  236 taaaatttc 244  Q
    |||||||||    
T  32917588 taaaatttc 32917580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 37578190 - 37578302
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| ||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  || |||||||||||||    
T  37578190 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatca 37578289  T
Q  234 tttaaaatttcgt 246  Q
    |||||||||||||    
T  37578290 tttaaaatttcgt 37578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 47999123 - 47999235
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||||    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 47999222  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  47999223 taaaatttagtcc 47999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 276
Target Start/End: Original strand, 4960541 - 4960680
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||| | |||||||||||||||| || |||  ||   ||||| |  ||||||||||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 4960640  T
Q  237 aaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||| ||||| ||||||||  ||||||||    
T  4960641 aaaatttcgtccctcttcccacttaatcactgccacgtca 4960680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 43759252 - 43759138
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||| |||   |||||||||||||| || ||||||||  |||||||| | |||||    
T  43759252 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatcttcaatca 43759153  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  43759152 tttaaaatttcgtcc 43759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 183221 - 183333
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  | ||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||||    
T  183221 ggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 183320  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  183321 taaaatttagtcc 183333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 19322890 - 19323002
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |  ||||| |||||||||||||||| |||  |||||||||||||| || |||||||  |||||||||||||||||    
T  19322890 taggcttaaatatgtatttcatccttataattacgggtcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatca 19322989  T
Q  234 tttaaaatttcgt 246  Q
    ||||||| |||||    
T  19322990 tttaaaagttcgt 19323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 23209365 - 23209468
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaa 239  Q
    ||||||||||||||||||  ||||||||||||||||||||||||  |  || |||||| ||||| || ||||||||  ||||||||||||||||||||||    
T  23209365 ttaaatatgtatttcatccttgcaattagggtcgtttaaaaattaatacttatattcgttaatccttgcaaactagccttgcaatcattaatcatttaaa 23209464  T
Q  240 attt 243  Q
    ||||    
T  23209465 attt 23209468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 41099157 - 41099050
Alignment:
Q  141 taaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaa 239  Q
    |||||||||||||||||  | ||||||| |||||||||||||||||| | |||||||||||||| || |||||||   || |||||||||||||||||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaa 41099058  T
Q  240 atttcgtc 247  Q
    ||||||||    
T  41099057 atttcgtc 41099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 49723147 - 49723046
Alignment:
Q  144 atatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatt 242  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  || ||||||||||||||||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  243 tc 244  Q
    ||    
T  49723047 tc 49723046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 1841888 - 1841775
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| ||||||||||||||||||  || ||| |||| |||||||||||||| |   |||||||||||||| || |||||||| || ||||||||||||||    
T  1841888 taggtttaaatatgtatttcatccttgtaatgaggggtcgtttaaaaattgttccctgtattcgctaatccttgcaaactagctt-gcaatcattaatca 1841790  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  1841789 tttaaaatttcgtcc 1841775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 40772507 - 40772637
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| | ||||  || | ||||| |  |||||||||    
T  40772507 ggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatt 40772606  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  40772607 taaaatttcgtccctctccccacttaatcac 40772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 7821382 - 7821270
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||| ||||||||  ||||||||  ||||||||||||||||||  | ||||||||||||| || ||||||||   ||||||||||||||||    
T  7821382 aggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtcat-gtattcgctaatccttgcaaactagccgtgcaatcattaatcat 7821284  T
Q  235 ttaaaatttcgtcc 248  Q
    ||| ||||||||||    
T  7821283 ttataatttcgtcc 7821270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 37578621 - 37578480
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||| ||||||||| |  |||  ||   || || | |||||||||    
T  37578621 aggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctggcaatttacccttacattgattaatcat 37578522  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||| |||  |||| ||||||||  ||||||||    
T  37578521 ttaaaatttcgtcactctccccacttaatcactgccacgtca 37578480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 4960913 - 4960825
Alignment:
Q  161 gcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    |||||||| ||||||||||||||||||    ||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  4960913 gcaattagaggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 4960825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 7231678 - 7231570
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  || ||||||| ||||||||||||||| |   |||||||  ||||||||||||||||| |||| |||||||||| ||    
T  7231678 aggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgtattcattaatctttacaaactagctttgtaatcattaattat 7231579  T
Q  235 ttaaaattt 243  Q
    |||||||||    
T  7231578 ttaaaattt 7231570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 34850493 - 34850353
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || |||| ||   ||||||   |||||||||    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34850394  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||| ||||||  |||| ||||||||  ||||||||    
T  34850393 taaaatttcatccctctccccacttaatcactgccacgtca 34850353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 42248475 - 42248603
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||| |||||| ||||||||| |  |||  ||   ||||| |  |||||||||||    
T  42248475 cttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaatcattta 42248574  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||  |||| ||||||||    
T  42248575 aaatttcgtccctctccccacttaatcac 42248603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 19323317 - 19323210
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||||||   || ||||| || ||||||||||||| |||  |||||||||||||| || |||||||  ||||||||||||||||||||||    
T  19323317 ttaaatatgtatttcattcttgtaattatggatcgtttaaaaattcgttcatgtattcgctaatccttgcaaactaactttgcaatcattaatcatttaa 19323218  T
Q  239 aatttcgt 246  Q
    || |||||    
T  19323217 aagttcgt 19323210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 17692610 - 17692492
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||| |||   |||  ||||||||| || |||| ||| |||||| |  ||||||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaatccttgcaaattagctttgcattgtttaatcatttaa 17692511  T
Q  239 aatttcgtccctcatccca 257  Q
    ||||||||||| |||||||    
T  17692510 aatttcgtcccccatccca 17692492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 35473629 - 35473743
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| ||||||||| |  ||||||||  ||| ||||||||| ||    
T  35473629 taggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaactagccttgtaatcattaaaca 35473728  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  35473729 tttaaaattttgtcc 35473743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 250
Target Start/End: Original strand, 5734008 - 5734123
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||| ||  ||||||||||| ||||||||||||||||  | ||| ||||||||| || |||| |||| ||||| |  |||||||    
T  5734008 taggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcat-gtaatcgctaatccttgcaaattagtcttgcattgtttaatca 5734106  T
Q  234 tttaaaatttcgtccct 250  Q
    |||||||||| ||||||    
T  5734107 tttaaaattttgtccct 5734123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 6367562 - 6367702
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||||    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||| ||||||||  ||||||||    
T  6367662 taaaatttcgtccctctccccacttaatcactgccacgtca 6367702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 34464879 - 34464747
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| |||| ||||||||||||||   |||| |||||||||||  |||  ||   |||||||  |||||||    
T  34464879 taggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatca 34464780  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| |||||||  |||| ||||||||    
T  34464779 tttaaaattttgtccctctccccacttaatcac 34464747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 34849011 - 34849151
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| || |||||||||||||   |||||||||||||| || |||| ||   ||||||   |||||||||    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34849110  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||  ||||||||  ||||||||    
T  34849111 taaaatttcgtccctctcccctcttaatcactgccacgtca 34849151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 36694678 - 36694546
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||||| || |||||||||||||| | |||| ||||||||| | ||||  ||   ||||| |  |||||||    
T  36694678 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36694579  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| |||  |||| ||||||||    
T  36694578 tttaaaatttcgtctctctccccacttaatcac 36694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 36710779 - 36710647
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||||| || |||||||||||||| | |||| ||||||||| | ||||  ||   ||||| |  |||||||    
T  36710779 taggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 36710680  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| |||  |||| ||||||||    
T  36710679 tttaaaatttcgtctctctccccacttaatcac 36710647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 17691218 - 17691345
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||| |||||||||||| ||  | ||| ||||| ||||||||||||||||   |||| ||||||||| || |||| |||| ||||| |  ||||||||    
T  17691218 aggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgtttaatcat 17691317  T
Q  235 ttaaaatttcgtccctcatcccagttaa 262  Q
    |||||||||||||||||| || ||||||    
T  17691318 ttaaaatttcgtccctcaaccaagttaa 17691345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 34464449 - 34464560
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| |||||||||||  |||  ||   |||||||  |||||||||    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  236 taaaatttcgtc 247  Q
    ||||||||||||    
T  34464549 taaaatttcgtc 34464560  T

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Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 276
Target Start/End: Complemental strand, 40210796 - 40210658
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  |||||||| ||| ||||||||||||||| |||||| ||||||||  |  |||  ||   ||||| |  |||||||||||    
T  40210796 cttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 40210697  T
Q  238 aaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||  |||| ||||||||  ||||||||    
T  40210696 aaatttcgtccctctccccacttaatcactgccacgtca 40210658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 272
Target Start/End: Original strand, 41098731 - 41098869
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||||||||| | |||| ||||||||| | ||||  ||   ||||| |  |||||||    
T  41098731 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 41098830  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccac 272  Q
    |||||||||| ||||| |  |||| |||||||| |||||    
T  41098831 tttaaaattttgtccccctccccacttaatcactaccac 41098869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 17662279 - 17662138
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||| ||| |||||||||||||||||  | || ||| ||||| |  |||  ||   ||||| |  ||||||||    
T  17662279 aggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcat 17662180  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||| ||||| ||||||||  ||||||||    
T  17662179 ttaaaatttcgtccctcttcccacttaatcactgccacgtca 17662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 19515812 - 19515885
Alignment:
Q  130 tatactaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaat 202  Q
    |||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||| ||| ||||    
T  19515812 tataataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaat 19515885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 23209757 - 23209688
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||  ||||| |||||||||    
T  23209757 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatc 23209688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 19018059 - 19017927
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||  ||||||||||||||||||   |||||||||||||| |  |||  ||   ||||| |  |||||||    
T  19018059 taggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatca 19017960  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| ||||||| ||||| ||||||||    
T  19017959 tttaaaattttgtccctcttcccacttaatcac 19017927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 31197065 - 31197200
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||| || | |||||||| ||||| |   ||| ||   |||||     ||||||||    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcatt 31197159  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||| |||||||||| ||||||||||  ||||||||    
T  31197160 taaaatttcatccctcatcctagttaatcactgccacgtca 31197200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 13300331 - 13300265
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||| | ||||||| ||||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaatc 13300265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35152757 - 35152691
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||| || | ||||||||||||||    
T  35152757 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaatc 35152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 42248871 - 42248790
Alignment:
Q  163 aattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcg 245  Q
    ||||||||| ||| |||||||||| | |||||||||||||  || ||||||||| ||||||| |||||| |||||||||||||    
T  42248871 aattagggt-gttaaaaaattggtctctgtattcgctaattcttgcaaactagtcttgcaattattaattatttaaaatttcg 42248790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 266
Target Start/End: Original strand, 14878980 - 14879101
Alignment:
Q  146 atgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttc 244  Q
    |||||||| |||  ||||||||||| |||||||||||||||||  |||| |||||||||||  |||  ||   ||||| |  ||||||||||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T
Q  245 gtccctcatcccagttaatcac 266  Q
    |||||||  |||| ||||||||    
T  14879080 gtccctctccccacttaatcac 14879101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 48691171 - 48691288
Alignment:
Q  160 tgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtccctcatcccag 258  Q
    ||||||||||| ||||||||||||||||   |||||||| ||||  || |||||||   ||||||||||| |||||||||||||| ||| |||  ||||     
T  48691171 tgcaattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaactaaccttgcaatcattgatcatttaaaattttgtcactctccccac 48691270  T
Q  259 ttaatcacgaccacgtca 276  Q
    ||||||||  ||||||||    
T  48691271 ttaatcactgccacgtca 48691288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 35152341 - 35152393
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  35152341 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggt 35152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 40435348 - 40435412
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||||||| |||||    
T  40435348 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatc 40435412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 14879386 - 14879319
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||| |||||||||  ||||||||||| |||||||||||||||| | | ||||||||||||    
T  14879386 ggcttaaatatatatttcatcattgcaattagggatcgtttaaaaattggtctctatattcgctaatc 14879319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 24009966 - 24009839
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||| |||||||||||  ||||||||||| ||||||||||||||||  ||||| |||| |||| |  |||  ||   ||||| |  ||||||||||||    
T  24009966 ttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaa 24009867  T
Q  239 aatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||  |||| ||||||||    
T  24009866 aatttcgtccctctccccacttaatcac 24009839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 26024422 - 26024553
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| ||   ||||||||||| |||||||||||||||| | |||| ||||||||| |  |||  ||   ||||| |  ||||||||    
T  26024422 aggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 26024521  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||| ||||||||||  |||| ||||||||    
T  26024522 ttaaaagttcgtccctctccccacttaatcac 26024553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 30711327 - 30711457
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||| |||||||||||| | | | || ||||||||| |  |||  ||   ||||| |  |||||||||    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatt 30711426  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  30711427 taaaatttcgtccctcgccccacttaatcac 30711457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 48692441 - 48692335
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  || |||||| |||||||||||||||| |  ||||||||| ||||  || |||| |||  || ||| ||||||||||||    
T  48692441 gcttaaatatgtatttgatcattgtaattagaggtcgtttaaaaattgatcattgtattcgttaattcttgcaaattagccttacaaacattaatcattt 48692342  T
Q  237 aaaattt 243  Q
    |||||||    
T  48692341 aaaattt 48692335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 266
Target Start/End: Original strand, 1103463 - 1103591
Alignment:
Q  141 taaatatgtatttcatctctgcaattag-ggtcgtttaaaa--attggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||| ||||||||| ||||||||||||  ||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||||||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 1103562  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||  |||| ||||||||    
T  1103563 aaatttcgtccctctccccacttaatcac 1103591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 1841457 - 1841589
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||| ||||||||||| | ||||||| || ||||||||||||||||| |  ||| ||||||||| | ||||  ||   || || |  |||||||    
T  1841457 taggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatca 1841556  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| |||  |||| ||||||||    
T  1841557 tttaaaatttcgtcactctccccacttaatcac 1841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 40772888 - 40772820
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||||  |||||||| ||||||||| ||||| |||   ||||||||||||||    
T  40772888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaatc 40772820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 46163033 - 46163141
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  || |||||||| ||||||||||||||||   |||| ||||||||| | ||||  ||   ||||| |  ||||||||||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 46163132  T
Q  239 aatttcgtc 247  Q
    |||||||||    
T  46163133 aatttcgtc 46163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 47999522 - 47999390
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  || |||||||| ||||||||||||||||   |||| |||||||||||  |||  ||    |||| |  |||||||    
T  47999522 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatca 47999423  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||| |||||||||  |||| ||||||||    
T  47999422 tttaaaatatcgtccctctccccacttaatcac 47999390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 13914494 - 13914355
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  ||||||||| ||| ||||||||||||||   |||| ||||||||| |  |||  ||   ||| | |  ||||||||||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  237 aaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||  |||| | ||||||  ||||||||    
T  13914394 aaaatttcgtccctctccccactaaatcactgccacgtca 13914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 25647883 - 25647934
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  25647883 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 25647934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 31514631 - 31514584
Alignment:
Q  219 tgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||||    
T  31514631 tgcaattattaatcatttaaaatttcgtccctctccccacttaatcac 31514584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 40435436 - 40435495
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcagctaatcagt 286  Q
    |||||||||||||||| |||| |||| |||| ||||||||  |||||| |||||||||||    
T  40435436 ttaatcatttaaaattccgtctctcagcccaattaatcactgccacgttagctaatcagt 40435495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 13295225 - 13295275
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||| ||||||||| |||| |||||||||  ||||||||    
T  13295225 attaatcatttaaaatgtcgtccctcttcccggttaatcactgccacgtca 13295275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 35152689 - 35152659
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtcc 248  Q
    |||||||||||||||||||||||||||||||    
T  35152689 ttgcaatcattaatcatttaaaatttcgtcc 35152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 40439615 - 40439539
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta--gggtcgtttaaaaattggtttttgtattcgctaatctttacaaacta 214  Q
    |||||||||||||||||||  ||||||||  |||||||||||||||| | |  |||||||||||||| || |||||||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaatt-gatcatgtattcgctaatccttgcaaacta 40439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 42533022 - 42533071
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaatt 183  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||||||||    
T  42533022 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 42533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 51019778 - 51019701
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaac 212  Q
    ||||||||||||||| || ||| |||||| ||||| ||||||||||||||||  ||| | || ||||||||| |||||    
T  51019778 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaatctttgcaaac 51019701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 28011445 - 28011493
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  28011445 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 28011493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 32133354 - 32133239
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg--tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    ||||||| ||||||| ||||||  ||||||||||||  || |||||||||| ||  ||||| ||| |||||||  |||| |||  | ||||   ||||||    
T  32133354 taggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatc 32133255  T
Q  233 atttaaaatttcgtcc 248  Q
    ||||||||||||||||    
T  32133254 atttaaaatttcgtcc 32133239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 51015631 - 51015683
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||| || ||| |||||| || |||||||||||||||||||    
T  51015631 taggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggt 51015683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 135 - 325
Target Start/End: Complemental strand, 44045432 - 44045241
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  44045432 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 44045333  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtcagctaatcagtaaaatatggcttaaaagtacaaaaataccccttgcaaat 325  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||    
T  44045332 tttaaaattttgtccctcatcccagttaatcactgccacgtcagctaataagtgaaatatgacttgaaagtacaaaaataccccttgcaaat 44045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 137 - 263
Target Start/End: Original strand, 25230102 - 25230229
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||| | ||||||||    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatt 25230201  T
Q  236 taaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||||||| | ||||||||||    
T  25230202 taaaatttcgtccctgagcccagttaat 25230229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 15848518 - 15848404
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||| || | |||||   ||||||||||||||||    
T  15848518 taggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatca 15848419  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  15848418 tttaaaatttcgtcc 15848404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 36382556 - 36382443
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||   ||||||||||||||  | ||||||||| |||||||| ||||||||    
T  36382556 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccatgcaaactagtcttgcaatcgttaatcat 36382457  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  36382456 ttaaaatttcgtcc 36382443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 37895346 - 37895455
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  37895346 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 37895445  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  37895446 ttaaaatttc 37895455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 10713151 - 10713039
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||| || |||| |||  |||||||| |||||||||    
T  10713151 ggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaatcgttaatcatt 10713052  T
Q  236 taaaatttcgtcc 248  Q
    |||||| ||||||    
T  10713051 taaaatgtcgtcc 10713039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 11163054 - 11163166
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||| ||||||||  ||||||||||||||||||   |||||||||||||| || ||||||||| ||||||||||||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 11163153  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  11163154 taaaatttagtcc 11163166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 3555249 - 3555380
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||| || || ||||||| |||  ||||| || ||||||||    
T  3555249 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgttattccttacaaattagccttgcattctttaatcat 3555348  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| | | |||||||||||||    
T  3555349 ttaaaatttcgtcctttaacccagttaatcac 3555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 39423945 - 39423831
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||| |   | |||||||||||| || ||||||||| ||||||||||||||||    
T  39423945 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagtcttgcaatcattaatca 39423846  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  39423845 tttaaaattttgtcc 39423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 36755517 - 36755404
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   | || ||||||||| || ||||||||  |||||||||||||||||    
T  36755517 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcat 36755418  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  36755417 ttaaaatttcgtcc 36755404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 39498709 - 39498600
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  39498709 taggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 39498610  T
Q  234 tttaaaattt 243  Q
    ||||||||||    
T  39498609 tttaaaattt 39498600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 133 - 248
Target Start/End: Complemental strand, 34448227 - 34448111
Alignment:
Q  133 actaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaat 231  Q
    |||||||||||| ||||||||||||  ||||||||||| | ||||||||||||||   | |||||| ||||| || ||||||||| ||||||||||||||    
T  34448227 actaggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaat 34448128  T
Q  232 catttaaaatttcgtcc 248  Q
    |||||||||||||||||    
T  34448127 catttaaaatttcgtcc 34448111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 141 - 248
Target Start/End: Original strand, 44713799 - 44713907
Alignment:
Q  141 taaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaa 239  Q
    |||||||||||||||||  || ||||| |||||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||||||||    
T  44713799 taaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaa 44713898  T
Q  240 atttcgtcc 248  Q
    |||||||||    
T  44713899 atttcgtcc 44713907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 45556476 - 45556368
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  || |||||||| ||||||||||||||||   ||||||||||||||||| ||||||||  |||||||||||||||||    
T  45556476 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaatctttgcaaactagccttgcaatcattaatcat 45556377  T
Q  235 ttaaaattt 243  Q
    |||||||||    
T  45556376 ttaaaattt 45556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 2318939 - 2318836
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  | ||||||||| |||||||||||||||||  ||||||||||| || || ||||||||| |||||||||||||||||    
T  2318939 aggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggttcatgtattcgctattcgttgcaaactagtcttgcaatcattaatcat 2318840  T
Q  235 ttaa 238  Q
    ||||    
T  2318839 ttaa 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 9076495 - 9076384
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| ||   ||||||||||| |||||||||||||||| |  ||||||| ||||| || ||||||||| ||||||||||||||||||    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 9076396  T
Q  236 taaaatttcgtc 247  Q
    ||||||||||||    
T  9076395 taaaatttcgtc 9076384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 25231278 - 25231136
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||||||||||||| |  |||| ||   |||||| | |||||||    
T  25231278 taggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatca 25231179  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  ||||||||||| ||  ||||||||    
T  25231178 tttaaaatttcgtcccttgtcccagttaatgactgccacgtca 25231136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 36480144 - 36480034
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||   | |||||||||||| || ||||||||  |||||||||||||| |||||    
T  36480144 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaataattta 36480045  T
Q  238 aaatttcgtcc 248  Q
    |||||||||||    
T  36480044 aaatttcgtcc 36480034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 6588686 - 6588795
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||| || ||||||||||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  6588786 aatttcgtcc 6588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 13692637 - 13692536
Alignment:
Q  148 gtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgt 246  Q
    ||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||||||||||||||    
T  13692637 gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgt 13692538  T
Q  247 cc 248  Q
    ||    
T  13692537 cc 13692536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 16099453 - 16099340
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   ||||||| |||||| || ||||||||  |||||||||||||||||    
T  16099453 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcat 16099354  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  16099353 ttaaaatttagtcc 16099340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 6658275 - 6658163
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||| ||||||||||||||||||   |||||||||||||| || ||||||||  || |||||||||||||||    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatt 6658176  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  6658175 taaaatttagtcc 6658163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 21370630 - 21370490
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  || |||||  |||||||||||||||| |   |||||||| ||||| || ||||||||  |||||||||||||| |||    
T  21370630 ggcttaaatatgtatttcatccttgtaattataggtcgtttaaaaattgatccatgtattcgttaatccttgcaaactagcattgcaatcattaataatt 21370531  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||| | |||| ||||| || |||||||||    
T  21370530 taaaatttcgtccctgagcccaattaattactaccacgtca 21370490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 44044113 - 44044254
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| ||| |||||||||||| | ||||||||||||||   ||||||| |||||| ||  ||||||   ||| |||||||||||||    
T  44044113 aggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatcat 44044212  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||| | |||| ||||| ||  ||||||||    
T  44044213 ttaaaatttcgtccctgagcccaattaattactgccacgtca 44044254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 3556437 - 3556329
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||  ||||||||  |||||||| ||||||||||||||||||| | |||| ||| ||||| || ||||||||  ||||| || |||||||||    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatt 3556338  T
Q  236 taaaatttc 244  Q
    |||||||||    
T  3556337 taaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 11163456 - 11163321
Alignment:
Q  132 tactaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaa 230  Q
    |||||||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||  | |||| |  ||||    
T  11163456 tactaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaa 11163357  T
Q  231 tcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||||  |||| ||||||||    
T  11163356 tcatttaaaatttcgtccctctccccacttaatcac 11163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 2318160 - 2318273
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||| | |||| ||||||||  |  |||  ||   ||||| |  |||||||||||    
T  2318160 gcttaaatatgtatttcatccttgcaattagggtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattta 2318259  T
Q  238 aaatttcgtccctc 251  Q
    ||||||||||||||    
T  2318260 aaatttcgtccctc 2318273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 6307145 - 6307038
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||   | || ||| ||||| ||||||| ||||  |||| |  |||||||||    
T  6307145 ggcttaaatatgtatttcatct-tgcaattagtggtcgtttaaaaattggtccctataatcgttaatccttacaaattagtcctgcattatttaatcatt 6307047  T
Q  236 taaaatttc 244  Q
    |||||||||    
T  6307046 taaaatttc 6307038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 30729621 - 30729751
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||||   | |||||||||||| || |||| |    ||||| || |||||| ||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaatccttgcaaattgcccttgcattctttaatcgtt 30729720  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||| |   |||||||||||||    
T  30729721 taaaatttcgtcctttgacccagttaatcac 30729751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 36382159 - 36382301
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||| |||||||||||||  ||||||||||| ||||||||||||||||   | || ||||||||| | ||||  ||   ||||| |  |||||||    
T  36382159 taggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatca 36382258  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||| ||||||  |||| ||||||||  ||||||||    
T  36382259 tttaaaatttcatccctctccccacttaatcactgccacgtca 36382301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 3653417 - 3653368
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  3653417 ttaatcatttaaaatttcgtccctcttccaagttaatcactaccacgtca 3653368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 15848087 - 15848228
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| |   ||  ||   ||||| |  ||||||||    
T  15848087 aggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcat 15848186  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  |||| ||||||||  ||||||||    
T  15848187 ttaaaatttcgtccctctccccacttaatcactgccacgtca 15848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 276
Target Start/End: Complemental strand, 37895772 - 37895635
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  |||||||| |||||||||||||| |||||   ||| ||||||||| |  |||  ||   ||||| |  ||||||||||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaa 37895673  T
Q  239 aatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||  |||| ||||||||  ||||||||    
T  37895672 aatttcgtccctctccccacttaatcactgccacgtca 37895635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 11349542 - 11349504
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatca 265  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  11349542 ttaatcatttaaaatttcgtccctcaacccagttaatca 11349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 36479719 - 36479848
Alignment:
Q  139 cttaaatatgtatttcatc-tctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||||   |||| |||||||||||  ||   ||   ||||| |  ||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcattt 36479818  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||| ||  |||| ||||||||    
T  36479819 aaaatttcgtccatctccccacttaatcac 36479848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 36755094 - 36755223
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||| |  |||||| |||||||||||||||||||  ||||  |||||||| | ||||  ||   || || |  ||||||||||    
T  36755094 gcttaaatatgtatttcatctttataattagaggtcgtttaaaaattggttcatgtaaccgctaatcctaacaatttacccttacattgtttaatcattt 36755193  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||| |||  |||| ||||||||    
T  36755194 aaaatttcgtctctctccccacttaatcac 36755223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 45556111 - 45556179
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| |||||||||    
T  45556111 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatc 45556179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 6848071 - 6848021
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    |||||||||||||||||||||| ||| |||| ||||| || ||||||||||    
T  6848071 ttaatcatttaaaatttcgtccatcaccccacttaattactaccacgtcag 6848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 10712725 - 10712863
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattagggt-cgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    ||||| |||||||||||||  |||||||||||| |||||||||||||||  || || ||  ||||| |  |||  ||   ||||| |  |||||||||||    
T  10712725 cttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccttataatcattaatcctggcaatttacccttgcattgtttaatcattta 10712824  T
Q  238 aaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||| ||||||  |||| |||||||| |||||||||    
T  10712825 aaatttcatccctctccccacttaatcactaccacgtca 10712863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 25623378 - 25623428
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||||||||||  ||| |||||||||  ||||||||    
T  25623378 attaatcatttaaaatttcgtccctctacccggttaatcactgccacgtca 25623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 39423515 - 39423581
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaat 202  Q
    |||||||||| ||||||||||  || ||||| ||||||||||||||||||| | |||| ||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaat 39423581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 6657875 - 6657928
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaa-ttagggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||| |||  ||||| || |||||||||||||||||||    
T  6657875 ctaggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggt 6657928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 25624443 - 25624403
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||||||||||  ||| |||||||||    
T  25624443 attaatcatttaaaatttcgtccctctacccggttaatcac 25624403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 134 - 276
Target Start/End: Original strand, 24349671 - 24349814
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||    
T  24349671 ctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 24349770  T
Q  233 atttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||  |||||||||||||  ||||||||    
T  24349771 atttaaaatttcgtccctctccccagttaatcactgccacgtca 24349814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 17355924 - 17356036
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| ||||| |||||||||||    
T  17355924 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaatctttgcaaactagtcttgcattcattaatcat 17356023  T
Q  235 ttaaaatttcgtc 247  Q
    |||||||||||||    
T  17356024 ttaaaatttcgtc 17356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 148185 - 148056
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||   | |||||| ||||| || ||||||||| ||||||||||||||||    
T  148185 taggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatca 148086  T
Q  234 tttaaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||||||| | | ||||||||||    
T  148085 tttaaaatttcgtccatgagcccagttaat 148056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 37976156 - 37976265
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||| ||||||||||||| |||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  37976156 ttaaatatgtatttcatccttgcaattagaggtcgtttaaaaactggttcctgtattcgctaatctttgcaaactagtcttgcaatcattaatcatttaa 37976255  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  37976256 aatttcgtcc 37976265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 10781914 - 10781786
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  10781914 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 10781815  T
Q  234 tttaaaatttcgtccctcatcccagttaa 262  Q
    ||||||||||||||||||  |||||||||    
T  10781814 tttaaaatttcgtccctctccccagttaa 10781786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 51692949 - 51692835
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  51692949 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 51692850  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  51692849 tttaaaatttcgtcc 51692835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 35027996 - 35028109
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||||||||||||  |||||||||||||| || ||||||||  ||||||||||||||||    
T  35027996 taggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatca 35028095  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  35028096 tttaaaatttcgtc 35028109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 147319 - 147459
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||||||   |||||||||||||| || ||||||||| |||||||||||||| |||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaataatt 147418  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||| |||||| | |||| ||||| ||  ||||||||    
T  147419 taaaattttgtccctgagcccaattaattactgccacgtca 147459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 34765378 - 34765492
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||| |||  ||||||||||||||| || ||||||||  ||||||||||||||||    
T  34765378 taggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatca 34765477  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  34765478 tttaaaatttcgtcc 34765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 44967071 - 44967181
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcattta 44967170  T
Q  238 aaatttcgtcc 248  Q
    |||||| ||||    
T  44967171 aaatttagtcc 44967181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 1179229 - 1179120
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  1179229 aggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 1179130  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  1179129 ttaaaatttc 1179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 24350861 - 24350748
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   || ||||||||||| || |||||||| ||||||||||||||||||    
T  24350861 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcattaatcat 24350762  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  24350761 ttaaaatttcgtcc 24350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 7452231 - 7452119
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||  ||||||||||||||||||    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 7452132  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  7452131 taaaatttagtcc 7452119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 11108265 - 11108161
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||| |  ||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  11108265 ttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccttgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaa 11108166  T
Q  239 aattt 243  Q
    |||||    
T  11108165 aattt 11108161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 52909683 - 52909569
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| || || ||||||||||||| | |||||||||||||| || ||||||||  |||||||||||||| |    
T  52909683 taggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaatta 52909584  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  52909583 tttaaaatttcgtcc 52909569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 18831745 - 18831637
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || |||||||   ||||||||||||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatcattgcaaactaaccttgcaatcattaatcatt 18831646  T
Q  236 taaaatttc 244  Q
    |||||||||    
T  18831645 taaaatttc 18831637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 53129505 - 53129616
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||| | | |  |||||| ||||||| |||||||||||| |||||||||||||||||    
T  53129505 aggcttaaatatgtattttatcattgcaattagggatcgtttaaaaaattggtcatgtatttgctaatccttacaaactagtcttgcaatcattaatcat 53129604  T
Q  235 ttaaaatttcgt 246  Q
    ||||||||||||    
T  53129605 ttaaaatttcgt 53129616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 36008842 - 36008956
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  || |||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  36008842 taggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaatcattgcaaactagccttgcaatcattaatca 36008941  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  36008942 tttaaaatttagtcc 36008956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 50418666 - 50418780
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| ||| ||||| || ||||||||  ||||||||||||||||    
T  50418666 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatca 50418765  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  50418766 tttaaaatttcgtcc 50418780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 55867544 - 55867402
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||| ||| ||||| || |||||||   ||||| |  |||||||    
T  55867544 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtttaatca 55867445  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  ||||||||||||||  ||||||||    
T  55867444 tttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 10780712 - 10780821
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   || ||||||||||| || ||||||||  |||||||||||||||||    
T  10780712 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcat 10780811  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  10780812 ttaaaatttc 10780821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 10974321 - 10974430
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   || ||||||||||| || ||||||||  |||||||||||||||||    
T  10974321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatcat 10974420  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  10974421 ttaaaatttc 10974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 13058411 - 13058298
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||| |||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  13058411 aggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 13058312  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  13058311 ttaaaatttagtcc 13058298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 37248630 - 37248521
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| ||||||||| || ||||||||| ||||||||||||||||||| |    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttta 37248531  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  37248530 aatttcgtcc 37248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 46661343 - 46661230
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   ||||||  |||||| |  ||||||||  |||||||||||||||||    
T  46661343 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcat 46661244  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  46661243 ttaaaatttcgtcc 46661230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 54086698 - 54086807
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||| ||  || ||||| ||| |||||||||||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttcaaagctagtcttgtaatcattaatcatttaa 54086797  T
Q  239 aatttcgtcc 248  Q
    ||||| ||||    
T  54086798 aattttgtcc 54086807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 14802163 - 14802051
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||| |||||||||  ||||||||| | ||||||||||||||||  ||||||||||||||  |  ||||||| | ||||||||||||||||||    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 14802064  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  14802063 taaaatttcgtcc 14802051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 15507674 - 15507785
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||   | |||||||||||| || |||||||||  ||||||||||| ||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagtcgtgcaatcattattcattt 15507773  T
Q  237 aaaatttcgtcc 248  Q
     |||||||||||    
T  15507774 caaatttcgtcc 15507785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 49879208 - 49879319
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| | ||||||| || ||||||||  |||||||||||||||||||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 49879307  T
Q  237 aaaatttcgtcc 248  Q
    ||||||||||||    
T  49879308 aaaatttcgtcc 49879319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 14801735 - 14801876
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||| ||||||||| | ||||  ||   ||| | |  ||||||||    
T  14801735 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 14801834  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  |||| ||||||||  ||||||||    
T  14801835 ttaaaatttcgtccctctccccacttaatcactgccacgtca 14801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 24711510 - 24711397
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||  ||| ||||| || ||||||||  ||||||||||||||||    
T  24711510 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatca 24711411  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  24711410 tttaaaatttcgtc 24711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 118 - 276
Target Start/End: Complemental strand, 34765824 - 34765668
Alignment:
Q  118 gtgtatatattatatactaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagt 216  Q
    |||||||||||||   |||||||||||||||||||| |||  |||||||| ||||||||||||||||||||  |||| ||||||||| |  |||  ||      
T  34765824 gtgtatatattat---ctaggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacc 34765728  T
Q  217 tttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||| |  |||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  34765727 tttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 34765668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 43155532 - 43155636
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||| |||  |||||||| |||||||||||||||||||   |||||||||||||| || ||||||||  |||||||| ||||||||||||    
T  43155532 ttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaa 43155631  T
Q  239 aattt 243  Q
    |||||    
T  43155632 aattt 43155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 54713653 - 54713741
Alignment:
Q  160 tgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    ||||||| ||||||||||||||||  | | |||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  54713653 tgcaattggggtcgtttaaaaattaatctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 54713741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 23613706 - 23613599
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| |||||||||||||| |   |||||||||||||| || |||| |||| ||||||||| ||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaatccttgcaaattagtcttgcaatcactaatcatt 23613607  T
Q  236 taaaattt 243  Q
    ||||||||    
T  23613606 taaaattt 23613599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 39539348 - 39539234
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||   |||| ||| ||||  || |||| |||  ||||| || |||||||    
T  39539348 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatca 39539249  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  39539248 tttaaaatttcgtcc 39539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 24411778 - 24411681
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaat 231  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||| |   |||||||||||||| || |||||||   ||||||||||||||    
T  24411778 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaatccttgcaaactaaccttgcaatcattaat 24411681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 128 - 276
Target Start/End: Complemental strand, 41583668 - 41583519
Alignment:
Q  128 tatatactaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatca 226  Q
    |||||| ||||||| ||||||| ||||||| ||||||||| ||||| ||||||||||| ||| |||||||||||||| |  |||| |     |||||       
T  41583668 tatataataggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaag 41583569  T
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||||||||| || || ||||||||  ||||||||    
T  41583568 ttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtca 41583519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 17356348 - 17356220
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||||   ||||||||||||||||  |||  || | ||||| |  || ||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaatcttggcaatttactcttgcattgtttgatcattta 17356249  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||  |||| ||||||||    
T  17356248 aaatttcgtccctctccccacttaatcac 17356220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 54434266 - 54434337
Alignment:
Q  213 tagttttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcagctaatcag 285  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||| ||||||||    
T  54434266 tagtcttgcaatcattaatcatttaaaattacgtccttcatcccagttaatcactgccacgtca-ctaatcag 54434337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 11448158 - 11448027
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||| || ||| |||||||| |||||||||||||| | | |||| ||||||||| || |||| ||   ||||| |  ||||||||    
T  11448158 aggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaatcat 11448059  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||| ||  | ||||||||||||    
T  11448058 ttaaaatttcgtcactatttccagttaatcac 11448027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 24711110 - 24711248
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  ||||||||    
T  24711110 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatcat 24711209  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacg 273  Q
    |||||||||||||||||  |||| |||||||| ||||||    
T  24711210 ttaaaatttcgtccctctccccacttaatcactaccacg 24711248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 51692551 - 51692668
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||| | | |||| ||||||||| | ||||  ||   ||||| |  |||||||    
T  51692551 taggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 51692650  T
Q  234 tttaaaatttcgtccctc 251  Q
     |||||||||||||||||    
T  51692651 cttaaaatttcgtccctc 51692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 52909254 - 52909383
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||||   |||| ||||||||| | ||||  ||   ||||| |  ||||||||||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||| ||  |||| ||||||||    
T  52909354 aaaatttcgtccatctccccacttaatcac 52909383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 5369295 - 5369183
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  |  || || |||||||||||||||||||   || ||||| ||||| || ||||||||  ||||||||||||||||||    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcatt 5369196  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  5369195 taaaatttagtcc 5369183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 50419067 - 50418935
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||||||||   | || ||||||||| |  ||| |||   ||||| |  |||||||    
T  50419067 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatca 50418968  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  50418967 tttaaaatttcgtccctctccccacttaatcac 50418935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 23613308 - 23613439
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| |||||||||||  |||  ||    |||| |  ||||||||    
T  23613308 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatcat 23613407  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||  |||| ||||||||    
T  23613408 ttaaaatttcgtccctctccccacttaatcac 23613439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 13058035 - 13058104
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||||||| | |||| |||||||||    
T  13058035 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatc 13058104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 266
Target Start/End: Complemental strand, 44967469 - 44967336
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||||||||||||   |||| ||||||||| |  |||  ||    |||| |  ||||||    
T  44967469 ctaggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatc 44967370  T
Q  233 atttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||  |||| ||||||||    
T  44967369 atttaaaatttcgtccctctccccacttaatcac 44967336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 56014816 - 56014865
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  56014816 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtca 56014865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 5368946 - 5369014
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||  ||||| |||||||||    
T  5368946 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatc 5369014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 35508278 - 35508348
Alignment:
Q  171 tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaattt 243  Q
    ||||||||||||||||  | ||||| ||||||| ||||||||| || ||||||||||||||||||||||||||    
T  35508278 tcgtttaaaaattggtcat-gtatt-gctaatcattacaaactggtcttgcaatcattaatcatttaaaattt 35508348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 55866111 - 55866163
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggttt 188  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggttt 55866163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 53702227 - 53702176
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||    
T  53702227 aggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggt 53702176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 41582538 - 41582576
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatca 265  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  41582538 ttaatcatttaaaatttcgtccctcatcacagttaatca 41582576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 48528484 - 48528546
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcg 197  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||||||| | ||||||||    
T  48528484 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcg 48528546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 16006219 - 16006154
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||| ||   ||||||||||| |||||||||||||||| | ||||||||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatc 16006154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 56015984 - 56015935
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  56015984 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtca 56015935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 1178056 - 1178123
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||||  || |||||| ||||||||||||||||| |  ||||||||||||||    
T  1178056 aggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattgg-tcatgtattcgctaatc 1178123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 4983041 - 4982993
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||||    
T  4983041 ttgcaattattaatcatttaaaatttcgtccctctccccacttaatcac 4982993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 7451832 - 7451884
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  7451832 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 7451884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 15508098 - 15507971
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  |||||||| |||||||||||||||| ||  ||||| ||||||||| | ||||  ||   |||||    |||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcattta 15508000  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| |||  |||| ||||||||    
T  15507999 aaatttcgtctctctccccacttaatcac 15507971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 37976583 - 37976451
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||   ||||||| ||||||||||||||||| |   |||| ||||||||  | ||||  ||   ||||| |  |||||||    
T  37976583 taggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctgacaatttatcattgcattgtttaatca 37976484  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| |||  |||| ||||||||    
T  37976483 tttaaaatttcgtcactctccccacttaatcac 37976451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 54087121 - 54086993
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||   |||| ||| ||||| | ||||  ||   ||||| |  |||||||||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcattta 54087022  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| |||  |||| ||||||||    
T  54087021 aaatttcgtctctctccccacttaatcac 54086993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 8439570 - 8439511
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    |||||| ||||||||||||||||||||||||||   |||| ||||||||  |||||||||    
T  8439570 ttgcaaacattaatcatttaaaatttcgtcccttgacccacttaatcaccgccacgtcag 8439511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 30642575 - 30642460
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||| ||||||| |||| || ||||||||| ||||| ||||||||||  |  ||||| ||| ||||| |  |||| |||| ||||||   ||||||||    
T  30642575 aggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatcat 30642476  T
Q  235 ttaaaatttcgtccct 250  Q
    ||||||||||||||||    
T  30642475 ttaaaatttcgtccct 30642460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 16605692 - 16605742
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  16605692 attaatcatttaaaatttcgtccctccccccacttaatcactgccacgtca 16605742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 40388443 - 40388405
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatca 265  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  40388443 ttaatcatttaaaatttcgtccctgatcacagttaatca 40388405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 35508670 - 35508621
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaatt 183  Q
    ||||||||||||||||||| |||  |||||||| ||||||||||||||||    
T  35508670 taggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaatt 35508621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 40387466 - 40387607
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||| ||||||| ||||||| ||||||||| ||| | |||||||||||||   |||||||||||||| |  |||| |     |||||   ||||||||    
T  40387466 aggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcat 40387565  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||| |||| || || ||||||||  ||||||||    
T  40387566 ttaaaatttcgttcctcttctcacttaatcactgccacgtca 40387607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 53129935 - 53129886
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattg 184  Q
    ||||||||||||||||||||||  |||||| | |||||||||||||||||    
T  53129935 aggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattg 53129886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 247
Target Start/End: Complemental strand, 53702158 - 53702129
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtc 247  Q
    ||||||||||||||||||||||||||||||    
T  53702158 ttgcaatcattaatcatttaaaatttcgtc 53702129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 18831348 - 18831416
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||| |||  | ||||||||| ||||||||||||||||   |||| |||||||||    
T  18831348 aggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 18831416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 27934614 - 27934662
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  27934614 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 27934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 53477182 - 53477150
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta 167  Q
    |||||||||||||| ||||||||||||||||||    
T  53477182 taggcttaaatatgcatttcatctctgcaatta 53477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 9367739 - 9367881
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| || ||||||||| ||||||||||| |||| | |||||||||||||| || ||||||||  ||||||| ||||||||    
T  9367739 taggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatca 9367838  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||| ||||||||  ||||||||    
T  9367839 tttaaaatttcgtccctcatcccaattaatcactgccacgtca 9367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 137 - 278
Target Start/End: Complemental strand, 3850555 - 3850413
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||   |||||||| ||||| ||  ||||||| | |||||||||||||| ||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataatccttggaaactagctctgcaatcattaatcgtt 3850456  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtcagc 278  Q
    ||||||||||||||||||||  |||||||||  ||||||||||    
T  3850455 taaaatttcgtccctcatccttgttaatcactgccacgtcagc 3850413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 40758540 - 40758426
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| || ||||||||||||| | |||||||||||||| || ||||||||| ||||||||||||||||    
T  40758540 taggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatca 40758441  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  40758440 tttaaaatttcgtcc 40758426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 36418116 - 36418004
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  || |||||||| |||||||||||||||||  |||||||||||||| || ||||||||  ||||||||||||||||||    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 36418017  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  36418016 taaaatttcgtcc 36418004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 41558306 - 41558183
Alignment:
Q  141 taaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaa 239  Q
    ||||||||||||||||| |||||||||||| |||||||||||||  |   |||||||||||||| || |||| |||| ||||||||||||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaattaatccatgtattcgctaatccttgcaaattagtcttgcaatcattaatcatttaaa 41558207  T
Q  240 atttcgtccctcatcccagttaat 263  Q
    ||||||||| | | ||||||||||    
T  41558206 atttcgtccttgagcccagttaat 41558183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 26463635 - 26463744
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||| |  ||||||||| ||||| || |||| |||| |||||||||||||||||||||    
T  26463635 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccttgtattcggtaatccttgcaaattagtcttgcaatcattaatcatttaa 26463734  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  26463735 aatttcgtcc 26463744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 19740920 - 19741035
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    |||||||||||||||||||| ||   ||||||||||| ||||||||||||||||   |||| ||||||||| || ||||||||  |||||||||||||||    
T  19740920 ctaggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatc 19741019  T
Q  233 atttaaaatttcgtcc 248  Q
    ||||||||||||||||    
T  19741020 atttaaaatttcgtcc 19741035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 3849030 - 3849143
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||| | |||||| ||||||||||| |||||||||||||||||   |||||||| ||||| || ||||||||   ||||||||||||||||    
T  3849030 aggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatcat 3849129  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  3849130 ttaaaatttcgtcc 3849143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 33689381 - 33689493
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||  | ||||||||||||  || ||||||||  |||||||||||||||||    
T  33689381 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcat-gtattcgctaattcttgcaaactagccttgcaatcattaatcat 33689479  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  33689480 ttaaaattttgtcc 33689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 42343156 - 42343047
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  || ||||| ||||||||||||||||| |   ||||||||||||||||| |||| |||| ||||||| |||||||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaatctttgcaaattagtcttgcaatgattaatcatttaa 42343057  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  42343056 aatttcgtcc 42343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 23457988 - 23458091
Alignment:
Q  146 atgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttc 244  Q
    ||||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || ||||||||  ||||||| |||||||||||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  245 gtcc 248  Q
    ||||    
T  23458088 gtcc 23458091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 53757150 - 53757039
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||||||   |||||||||  |||||||||||||||||   |||||||||||||| || |||||||   |||||||||||||||||||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  237 aaaatttcgtcc 248  Q
    ||||||||||||    
T  53757050 aaaatttcgtcc 53757039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 33689809 - 33689667
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||| ||||||||| |  |||  ||   ||||| |  |||||||    
T  33689809 taggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatca 33689710  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||  |||| ||||||||  ||||||||    
T  33689709 tttaaaatttcgtccctctccccacttaatcactgccacgtca 33689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 36417691 - 36417800
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||| |||| |||||||  || |||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||||||    
T  36417691 ttaaacatgtctttcatccttgtaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 36417790  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  36417791 aatttcgtcc 36417800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 41558006 - 41558119
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||||||   |||||||| |||||||||||||||||||  ||||||||||||||| || || | ||   ||||||| ||||||||    
T  41558006 taggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggtacttgtattcgctaatccttgcacattaaccttgcaattattaatca 41558105  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  41558106 tttaaaatttcgtc 41558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 46475205 - 46475097
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  | ||||||||| |||||||||||||| |  | ||||||||||||| || ||||||||  |||||||||||||||||||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgatact-gtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 46475107  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  46475106 aatttcgtcc 46475097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 23458409 - 23458277
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||| | |||| ||||||||| || |||  ||   ||||| |  |||||||    
T  23458409 taggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatca 23458310  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  23458309 tttaaaatttcgtccctctccccacttaatcac 23458277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 43384709 - 43384599
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||| || | | |||||| ||||| || ||||||||  |||||||||||| |||||||    
T  43384709 cttaaatatgtatttcatccttgcaattaggaatcgtttaaaaatttgtctctatattcgttaatccttgcaaactagccttgcaatcattagtcattta 43384610  T
Q  238 aaatttcgtcc 248  Q
    |||||||||||    
T  43384609 aaatttcgtcc 43384599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 46474818 - 46474945
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||| | |||| |||||||||||  |||  ||   ||||| |  ||||||||||||    
T  46474818 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcttggcaatttaccattgcattgtttaatcatttaa 46474917  T
Q  239 aatttcgtccctcatcccagttaatcac 266  Q
    ||||| |||||||  |||| ||||||||    
T  46474918 aattttgtccctctccccacttaatcac 46474945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 51993962 - 51994038
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaa 210  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||||    
T  51993962 taggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttacaa 51994038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 277
Target Start/End: Original strand, 25107212 - 25107354
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||| ||||| ||||||| |||||||||||| || ||||||||||||| | | || ||||||||| |  |||| |     |||||   ||||||||    
T  25107212 aggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcat 25107311  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    |||||||||||||||||||| |||||||||||  |||||||||    
T  25107312 ttaaaatttcgtccctcatcacagttaatcactgccacgtcag 25107354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 40033886 - 40033754
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||| | || | ||||||| |  |||  ||   ||||| |  |||||||    
T  40033886 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgtttaatca 40033787  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| |||||||  |||| ||||||||    
T  40033786 tttaaaattttgtccctctccccacttaatcac 40033754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 263
Target Start/End: Complemental strand, 53856486 - 53856358
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| ||| |||||| || |||||| ||||||||||||  |||||||| |||||| || ||||| |    |||||| |||||||||    
T  53856486 aggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtccttgtattcactaatccttgcaaacaaaccctgcaattattaatcat 53856387  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    |||||| || |||| ||  ||||||||||    
T  53856386 ttaaaaattggtccttctacccagttaat 53856358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 9294386 - 9294256
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   | || ||||||||| |  |||  ||   ||||| |  |||||||||    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  9294286 taaaatttcgtccctctccccacttaatcac 9294256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 53756747 - 53756873
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| ||  |||| ||| |||||||   ||  ||   ||||| |  ||||||||||||    
T  53756747 ttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattgattcatgtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaa 53756846  T
Q  239 aatttcgtccctcatcccagttaatca 265  Q
    |||||||||| || ||||| |||||||    
T  53756847 aatttcgtccatcttcccatttaatca 53756873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 2796177 - 2796309
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  |||||||| ||||| |||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||    
T  2796177 taggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 2796276  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  2796277 tttaaaatttcgtccctctccccacttaatcac 2796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 19741321 - 19741190
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| |||||||||||  |||  ||   ||| | |  ||||||||    
T  19741321 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccttgtattgtttaatcat 19741222  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||| |||  |||| ||||||||    
T  19741221 ttaaaatttcgtcactctccccacttaatcac 19741190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 21783832 - 21783773
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcagctaatcagt 286  Q
    |||||||||||||||||||| ||||| |||| ||||||||   |||||||||||||||||    
T  21783832 ttaatcatttaaaatttcgttcctcagcccaattaatcactgtcacgtcagctaatcagt 21783773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 25108522 - 25108383
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||| ||||||| ||||||| |||||||||||| || ||||||| |||||   |||| | ||||||| |  ||||||     ||||| | ||||||||||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcattt 25108423  T
Q  237 aaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||| ||||| |||||||||||  ||||||||    
T  25108422 aaaatttcgtccttcatcacagttaatcactgccacgtca 25108383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 40758147 - 40758214
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| |||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatc 40758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 276
Target Start/End: Complemental strand, 51994313 - 51994174
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  ||||||||||| ||||||||||||||||  ||||| ||||||||  |  |||  ||    |||| |  ||||||||||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T
Q  237 aaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||  |||| ||||||||  ||||||||    
T  51994213 aaaatttcgtccctctccccacttaatcactgccacgtca 51994174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 35712045 - 35712111
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||  ||||||||||| || |||||||||||||   ||||||||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaatc 35712111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 23276410 - 23276281
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||| ||||||| ||||||| |||||||||||| || |||||||||||||   |||| |||||||||    |||| ||    | ||| | ||||||||||    
T  23276410 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcattt 23276311  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||| |||||||||| |||||||||||    
T  23276310 aaaattttgtccctcatcacagttaatcac 23276281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 40758235 - 40758284
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtca 40758284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 42855710 - 42855625
Alignment:
Q  160 tgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttc 244  Q
    |||||||||| ||| |||||||||| ||   |||||||||||||| || ||||||||  ||||| || ||||||||||||||||||    
T  42855710 tgcaattaggcgtcatttaaaaattagtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaaaatttc 42855625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 47856385 - 47856494
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| |||| || ||||||||| | |||||||||||||||||  ||||| ||| ||||| | ||||| || | ||||||   |||||||    
T  47856385 taggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatca 47856484  T
Q  234 tttaaaattt 243  Q
    ||||||||||    
T  47856485 tttaaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 9292245 - 9292293
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggt 186  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggt 9292293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 42342789 - 42342841
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||||||  | |||||| |||||||||||||||||||    
T  42342789 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggt 42342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 1079651 - 1079536
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| ||||||| ||||||||| ||||| |||||||||||||   |||| ||| ||||| |  |||| |||  ||||||   ||||||     
T  1079651 taggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatct 1079552  T
Q  234 tttaaaatttcgtccc 249  Q
    ||||||||||||||||    
T  1079551 tttaaaatttcgtccc 1079536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 2796526 - 2796459
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaat 202  Q
    ||||||||||||||| ||||||  |||||||||| || ||||||||||||||   |||||||||||||    
T  2796526 aggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 26464015 - 26463964
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||||  ||||||||| | ||||||||||||||||    
T  26464015 aggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggt 26463964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 186
Target Start/End: Original strand, 36150530 - 36150577
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 36150577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 29192125 - 29192175
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||| ||||  ||||||||  ||||||||    
T  29192125 attaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtca 29192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 32717115 - 32717065
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||| ||||| ||||| ||  ||||||||    
T  32717115 attaatcatttaaaatttcgtccctcttcccaattaattactgccacgtca 32717065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 34142646 - 34142596
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 34142596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 55052585 - 55052539
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacg 273  Q
    |||||||||||||||||||||||||  |||| |||||||| ||||||    
T  55052585 ttaatcatttaaaatttcgtccctctccccatttaatcactaccacg 55052539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 23272822 - 23272891
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||| ||||||| ||||||| |||||||||||| |  ||||||||||||| | |||| |||||||||    
T  23272822 taggctttaatatgtctttcatccctgcaattagggattatttaaaaattggtatctgtaatcgctaatc 23272891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 33156331 - 33156282
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||  |||| ||||||||  ||||||||    
T  33156331 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtca 33156282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 247
Target Start/End: Original strand, 40033588 - 40033617
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtc 247  Q
    ||||||||||||||||||||||||||||||    
T  40033588 ttgcaatcattaatcatttaaaatttcgtc 40033617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 9294013 - 9294065
Alignment:
Q  191 gtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaattt 243  Q
    ||||||||||||| || ||||||| | ||  ||||||||||||||||||||||    
T  9294013 gtattcgctaatccttgcaaactaatcttataatcattaatcatttaaaattt 9294065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 10770806 - 10770758
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  10770806 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 10770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 21783403 - 21783476
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaacta 214  Q
    ||||||||||||||||||  || ||||| ||||||||||||  ||||||  |||||||||||||| || |||||||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgtttaaa--ttggttcctgtattcgctaatccttgcaaacta 21783476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 36314613 - 36314565
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  36314613 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 36314565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 48322692 - 48322644
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  48322692 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 48322644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 20385568 - 20385708
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||| ||||||||||||||||||    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 20385667  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||| | |||||||||| ||  ||||||||    
T  20385668 taaaatttcgtccctgagcccagttaattactgccacgtca 20385708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 13186489 - 13186376
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||| |||||||||  ||||||||||| |||||||||||||||||  |||||||||||||| || ||||||||  ||||||||||||||||    
T  13186489 taggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatca 13186390  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  13186389 tttaaaatttcgtc 13186376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 38862988 - 38862879
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||  |||||||||||||||||||||    
T  38862988 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 38862889  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  38862888 aatttcgtcc 38862879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 136 - 262
Target Start/End: Complemental strand, 20386859 - 20386732
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  | ||||| |||||||||    
T  20386859 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatcat 20386760  T
Q  235 ttaaaatttcgtccctcatcccagttaa 262  Q
    |||||||||||||||| | |||||||||    
T  20386759 ttaaaatttcgtccctgagcccagttaa 20386732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 12198948 - 12199062
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   | || ||||||||| || ||||||||| ||||||||||||||||    
T  12198948 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12199047  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  12199048 tttaaaatttcgtcc 12199062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 12443376 - 12443490
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   | || ||||||||| || ||||||||| ||||||||||||||||    
T  12443376 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatca 12443475  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  12443476 tttaaaatttcgtcc 12443490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 8316652 - 8316765
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||||||||||||   |||||||| ||||| || ||||||||  |||||||||||||||||    
T  8316652 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatcat 8316751  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  8316752 ttaaaatttcgtcc 8316765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 263
Target Start/End: Original strand, 30710854 - 30710982
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| |||||||||||||| |||| ||||||||| ||| |||||||| ||||||  ||||||||||||| ||| |||||||   ||||||||||||||||    
T  30710854 taggtttaaatatgtatttgatctttgcaattagaggttgtttaaaa-ttggttcatgtattcgctaatttttgcaaactaaccttgcaatcattaatca 30710952  T
Q  234 tttaaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||||||||| | ||||||||||    
T  30710953 tttaaaatttcgtccctgagcccagttaat 30710982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 36928905 - 36928792
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||||   |||||||||||||||| | |||||| ||||||| || ||||||||  |||||||||||||||||    
T  36928905 aggcttaaatatgtatttcatcgttgcaattagatatcgtttaaaaattggtctatgtatttgctaatccttgcaaactagccttgcaatcattaatcat 36928806  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  36928805 ttaaaatttcgtcc 36928792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 40317966 - 40318075
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||| || | |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 40318065  T
Q  238 aaatttcgtc 247  Q
    ||||| ||||    
T  40318066 aaattgcgtc 40318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 34177396 - 34177284
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||  ||||||||||||||| ||  |||||||  ||||| || |||||||||||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattta 34177297  T
Q  238 aaatttcgtccct 250  Q
    |||||||||||||    
T  34177296 aaatttcgtccct 34177284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 34685685 - 34685575
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| |||||||||||||||| || ||||||||||||| || ||||||||  || |||||||||||||||    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtctt-gtattcgctaatccttgcaaactagccttacaatcattaatcatt 34685587  T
Q  236 taaaatttcgtc 247  Q
    ||||||||||||    
T  34685586 taaaatttcgtc 34685575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 2534695 - 2534825
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||  | ||||||||| |||||||||||||||||||   |||| ||||||||| || ||||||| | ||||| |  |||||||||    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatt 2534794  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||  ||||||||||||||    
T  2534795 taaaatttcgtccctattcccagttaatcac 2534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 12272920 - 12273030
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    ||||||||||||||| |||  ||||||||||| |||||||||||||||| | |||| ||||||||| || ||||||||  ||||||| ||||||||||||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  238 aaatttcgtcc 248  Q
    |||||||||||    
T  12273020 aaatttcgtcc 12273030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 39072071 - 39071958
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||||||   |||||||| ||||| || ||||||||  ||||||||||||||||    
T  39072071 taggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatca 39071973  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  39071972 tttaaaatttcgtcc 39071958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 4994655 - 4994768
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| | |||||||||||| | | |||||||||||||| ||  |||||||  |||||||||||||| |    
T  4994655 taggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaatta 4994754  T
Q  234 tttaaaatttcgtc 247  Q
    ||||||||||||||    
T  4994755 tttaaaatttcgtc 4994768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 35756978 - 35756898
Alignment:
Q  168 gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    ||||||||||||||||||| | |||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  35756978 gggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 35756898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 38956100 - 38955988
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| ||  |||||||  ||||||||||||||||||    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcatt 38956001  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  38956000 taaaatttagtcc 38955988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 36186105 - 36186212
Alignment:
Q  141 taaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaa 239  Q
    |||||||||||||||||| || |||||||| || ||||||| |||||   |||||||||||||| || ||||||||| |||||||||||||| |||||||    
T  36186105 taaatatgtatttcatctttgtaattaggggtcttttaaaatttggtccctgtattcgctaatccttgcaaactagtattgcaatcattaattatttaaa 36186204  T
Q  240 atttcgtc 247  Q
    ||||||||    
T  36186205 atttcgtc 36186212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 1425051 - 1425165
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| |||||||||||||| |||  ||||||||||| ||||||||||||||||   ||||||| |||||| || ||||||||  ||||||||||||||||    
T  1425051 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatca 1425150  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  1425151 tttaaaatttagtcc 1425165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 30712143 - 30712018
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagggtc-gtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  ||| ||||||| | ||||||||||||||  | ||||| ||||||| || ||||||||  |||||||||||||||||||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcct-gtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  237 aaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||| | ||||||||||    
T  30712044 aaaatttcgtccctgaacccagttaat 30712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 30719920 - 30719795
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagggtc-gtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  ||| ||||||| | ||||||||||||||  | ||||| ||||||| || ||||||||  |||||||||||||||||||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtcct-gtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  237 aaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||| | ||||||||||    
T  30719821 aaaatttcgtccctgaacccagttaat 30719795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 34176443 - 34176571
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||||||   || |||||| ||||| || ||||||||| ||||| || ||||||||    
T  34176443 taggtttaaatatgtatttcatccttgcaattatggtcgtttaaaaattgg---ttatattcgttaatccttgcaaactagtcttgcattctttaatcat 34176539  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||| ||| |   |||||||||||||    
T  34176540 ttaaaatttcatcctttgacccagttaatcac 34176571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 23663542 - 23663657
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    ||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||   |||||||| ||||| ||  ||||||   ||| |||||||||||    
T  23663542 ctaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatc 23663641  T
Q  233 atttaaaatttcgtcc 248  Q
    ||||||||||||||||    
T  23663642 atttaaaatttcgtcc 23663657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 266
Target Start/End: Original strand, 7294103 - 7294231
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| | | | |||||||||||| ||  |||||||  ||||| || ||||||||||    
T  7294103 gcttaaatatgtatttcatct-tgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcattt 7294201  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||| ||| |   |||||||||||||    
T  7294202 aaaatttcatcctttgacccagttaatcac 7294231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 276
Target Start/End: Original strand, 13186059 - 13186200
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||| ||||||||| | ||||  ||   ||||| |  ||||||||    
T  13186059 aggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 13186158  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||| |||  |||| ||||||||  ||||||||    
T  13186159 ttaaaatttcgtctctctccccacttaatcactgccacgtca 13186200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 33357496 - 33357596
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||| |   |||||||||||||| || ||||| ||| || |||||||||||||    
T  33357496 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaatccttgcaaaccagtcttacaatcattaatca 33357595  T
Q  234 t 234  Q
    |    
T  33357596 t 33357596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 23698308 - 23698421
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg--tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||| |||  |||||||||||  ||||||||||||| ||   |||| ||||||||  || ||||||||  ||||||||||||||||     
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcag 23698407  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  23698408 ttaaaatttcgtcc 23698421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 39071676 - 39071806
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| | ||||  ||   ||||| |  |||||||||    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  39071776 taaaatttcgtccctctccccacttaatcac 39071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 134 - 266
Target Start/End: Complemental strand, 23663945 - 23663812
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    |||||||||||||||||||| |||  |||||||| ||||||||||||||||||| | |||| ||||||||| |  |||  ||   ||||| |  ||||||    
T  23663945 ctaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatc 23663846  T
Q  233 atttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||  |||| ||||||||    
T  23663845 atttaaaatttcgtccctctccccacttaatcac 23663812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 31608941 - 31608801
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||| ||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || |||  ||   ||||| |   ||||||||    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatt 31608842  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||| ||||||||  ||||||||    
T  31608841 taaaatttcgtccctctccccacttaatcactgccacgtca 31608801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 4406088 - 4405958
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  || |||||||| | ||||||||||||||   |||||| | ||||| || |||  ||   |||||||  |||||||||    
T  4406088 ggcttaaatatgtatttcatccttgtaattaggggttgtttaaaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatt 4405989  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||| ||||| ||||||||    
T  4405988 taaaatttcgtccctcttcccacttaatcac 4405958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 7295357 - 7295247
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| |||||||||||||| |||  |||||||| || |||||||||||| |||   |||||||||||||| || ||||||||| ||||| || ||||||     
T  7295357 taggtttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcattctttaatcg 7295258  T
Q  234 tttaaaatttc 244  Q
    |||||||||||    
T  7295257 tttaaaatttc 7295247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 11763103 - 11762974
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||| ||||||| |||| || ||||||||| || || |||||||||||||  ||||| ||||||||| | ||||| |  |  ||||| | ||||||||||    
T  11763103 gctttaatatgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaatcctgacaaattgctcctgcaaacgttaatcattt 11763004  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||| |||||||| |||||||||||    
T  11763003 aaaatttcgcccctcatcacagttaatcac 11762974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 16388581 - 16388650
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||  | ||||||||||||    
T  16388581 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctatattcgctaatc 16388650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 16388954 - 16388814
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| ||||| ||||||||||||||  |||| | ||||||| |  |||  ||   ||||| |  |||||||||    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||| ||||||||  ||||||||    
T  16388854 taaaatttcgtccctctccccacttaatcactgccacgtca 16388814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 34060487 - 34060619
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||| |  |||||||||||||||||   |||| ||||||||| || |||| |    ||||| || |||||||    
T  34060487 taggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatca 34060586  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||| ||| ||||||| || ||||||||||    
T  34060587 tttaaaacttcatccctcaaccaagttaatcac 34060619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 8317017 - 8316886
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||  ||||| ||||||||| |  |||  ||   ||||| |  ||||||||    
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 8316918  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||| ||  |||| ||||||||    
T  8316917 ttaaaatttcgtccatctccccacttaatcac 8316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 36928479 - 36928616
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||| | ||   ||||| ||||||||||||||||||| | |||| ||||||||| | ||||  ||   ||||| |  |||||||||    
T  36928479 ggcttaaatatgtatttcctttc---aattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36928575  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||| ||||||||  ||||||||    
T  36928576 taaaatttcgtccctctccccacttaatcactgccacgtca 36928616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 22915427 - 22915500
Alignment:
Q  174 tttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtc 247  Q
    |||||||||||||   |||| ||||||||| || ||||||||  |||||||||||||||||||| |||||||||    
T  22915427 tttaaaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcgtc 22915500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 34061757 - 34061644
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||| ||||  |||||||||  ||||||||||||||| |   |||||||||||||| || |||| |    ||||| || ||||||||    
T  34061757 aggcttaaatatgtattgcatccttgcaattagacgtcgtttaaaaattgatccatgtattcgctaatccttgcaaattgcccttgcattctttaatcat 34061658  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  34061657 ttaaaatttcgtcc 34061644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 23698674 - 23698542
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  || |||||||| ||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||    
T  23698674 taggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 23698575  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  23698574 tttaaaatttcgtccctctccccacttaatcac 23698542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 8747610 - 8747551
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    |||||| |||||||||||||||||||||||||| | |||| ||||||||  |||||||||    
T  8747610 ttgcaaacattaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcag 8747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Complemental strand, 22915787 - 22915656
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||| ||||| ||||||||||||||||   |||| |||||||||||  |||  ||   ||||| |  ||||||||    
T  22915787 aggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 22915688  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||| ||||||||  |||| ||||||||    
T  22915687 ttaaaattccgtccctctccccacttaatcac 22915656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 11761838 - 11761980
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| ||||||| |||||||||||| |  |||||||||| || | |||| ||| |||||||  |||| |     ||||| | |||||||    
T  11761838 taggctttaatatgtttttcatccctgcaattagggattatttaaaaattcgtctctgtaatcgttaatcttgtcaaattgcccctgcaaacgttaatca 11761937  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||| ||||||| | |||||||||  ||||||||    
T  11761938 tttaaaatttcgtacctcatcactgttaatcactgccacgtca 11761980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 262
Target Start/End: Original strand, 30459371 - 30459497
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  | |||||||| |||||||||||||| || | ||||||| |||||| || |||| ||   ||||| || ||||||| |    
T  30459371 ggcttaaatatgtatttcatccttacaattaggcgtcgtttaaaaattagtctatgtattcactaatccttgcaaattacaattgcattctttaatcact 30459470  T
Q  236 taaaatttcgtccctcatcccagttaa 262  Q
    ||||| || |||| ||| |||| ||||    
T  30459471 taaaaattggtccttcaacccacttaa 30459497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 36186494 - 36186380
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||| |||||||||| ||||||||  | | || ||||||||| | ||||  ||  |||||| |  |||||||    
T  36186494 taggcttaaatatgtatttcatccttgcaattaagggtcgttt-aaaattgg--tctataatcgctaatcctgacaatttacctttgcattgtttaatca 36186398  T
Q  234 tttaaaatttcgtccctc 251  Q
    ||||||||||||||||||    
T  36186397 tttaaaatttcgtccctc 36186380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 4995085 - 4994957
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||| |  |||| ||||||||| | ||||  ||   ||||| |  ||||||||    
T  4995085 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattgg-tcctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 4994987  T
Q  235 ttaaaatttcgtccctcatcccagttaatc 264  Q
    || ||||||||||||||  |||| ||||||    
T  4994986 ttcaaatttcgtccctctccccacttaatc 4994957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 7313435 - 7313383
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||| ||| |||||| || |||||||||||||||||||    
T  7313435 taggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggt 7313383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 9065667 - 9065715
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||||    
T  9065667 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggt 9065715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 12199265 - 12199217
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||||    
T  12199265 ttgcaatcattaatcatttaaaatttcgtctctctccccacttaatcac 12199217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 12273283 - 12273151
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| |||||||||||||| |||  ||||||||||| ||||||||||||||||   |||| ||| |||||    |||  ||   ||||| |  |||||||    
T  12273283 taggtttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatca 12273184  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||| ||||| ||||||||    
T  12273183 tttaaaatttcgtccctcttcccacttaatcac 12273151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 12443693 - 12443645
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||||    
T  12443693 ttgcaatcattaatcatttaaaatttcgtctctctccccacttaatcac 12443645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 7306398 - 7306449
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||| ||| |||||| || |||||||||||||||||||    
T  7306398 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggt 7306449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 38955703 - 38955770
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||| |||  ||||||| ||| ||||||||||||||||  ||||| |||||||||    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatc 38955770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 42803646 - 42803596
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggt 42803596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 277
Target Start/End: Original strand, 8746324 - 8746465
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||| ||||| |||| || |||||||||||| || ||||||||| |||   |||| ||| ||||| | ||||| ||   |||||| | |||||||||    
T  8746324 ggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatcatt 8746423  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    |||||||||||| ||   |||| ||||||||  |||||||||    
T  8746424 taaaatttcgtcacttgacccacttaatcaccgccacgtcag 8746465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 40318393 - 40318280
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| |||| ||||||||||| ||   |||| ||||||||| |  |||  ||   ||||| |  ||||||||    
T  40318393 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 40318294  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  40318293 ttaaaatttcgtcc 40318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 11674777 - 11674824
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  ||||||||||||||||||||||||| ||||| ||||||||    
T  11674777 ttgcaattgttaatcatttaaaatttcgtccctc-tcccacttaatcac 11674824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 35756582 - 35756633
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||||||  |||||||| ||||| |||||||||||||    
T  35756582 taggcttaaatatgtatttcatc-atgcaattaggggtcatttaaaaattggt 35756633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 36325316 - 36325364
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  36325316 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 36325364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 681158 - 681016
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| |||||||||||||||| | |||||||||||||| || ||||||||  ||||||||||||||||    
T  681158 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 681059  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||| | | |||||||||| ||  ||||||||    
T  681058 tttaaaatttcgtccatgagcccagttaattactgccacgtca 681016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 13379912 - 13379783
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||||||||||||  || ||||||||  ||||||||||||||||    
T  13379912 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatca 13379813  T
Q  234 tttaaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||||||||| | ||||||||||    
T  13379812 tttaaaatttcgtccctgagcccagttaat 13379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 679865 - 679993
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||||||||| | |||||||||||||| || ||||||||  |||||||||||||||||    
T  679865 aggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 679964  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||| | | ||||||||||    
T  679965 ttaaaatttcgtccatgagcccagttaat 679993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 20651006 - 20651122
Alignment:
Q  133 actaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaat 231  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||  |||||||||||||| || ||||| ||  ||||||||||||||    
T  20651006 actaggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaat 20651105  T
Q  232 catttaaaatttcgtcc 248  Q
    |||||||||||||||||    
T  20651106 catttaaaatttcgtcc 20651122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 139 - 276
Target Start/End: Original strand, 11434804 - 11434942
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||||||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattta 11434903  T
Q  238 aaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||| |   |||||||||||||  ||||||||    
T  11434904 aaatttcgtcctttgacccagttaatcactgccacgtca 11434942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 12081066 - 12080952
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| ||   |||||||||||||| || ||||||||| ||||||||||||||||    
T  12081066 taggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 12080967  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  12080966 tttaaaatttcgtcc 12080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 30726189 - 30726075
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||| ||||||||||||    
T  30726189 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatca 30726090  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  30726089 tttaaaatttcgtcc 30726075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 3059685 - 3059576
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  3059685 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 3059586  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  3059585 ttaaaatttc 3059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 17734195 - 17734308
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||| ||||| | ||||||| || ||||||||  |||||||||||||||||    
T  17734195 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatcat 17734294  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  17734295 ttaaaatttcgtcc 17734308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 33517963 - 33517850
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || |||| |||  |||||||||||||||||    
T  33517963 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 33517864  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  33517863 ttaaaatttcgtcc 33517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 26463177 - 26463319
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||||   |||||||| ||||| |  |||| ||   ||||||   |||||||    
T  26463177 taggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatca 26463276  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  26463277 tttaaaatttcgtccctcatcccagttaatcactgccacgtca 26463319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 33647381 - 33647267
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || |||||||   ||||||||||||||||    
T  33647381 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatca 33647282  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  33647281 tttaaaatttagtcc 33647267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 128 - 248
Target Start/End: Complemental strand, 30804298 - 30804177
Alignment:
Q  128 tatatactaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatca 226  Q
    ||||| ||||| ||||||||||||||||||  ||||||||||| |||||||||||||| |   |||||||||||||  || ||||||||  |||||||||    
T  30804298 tatattctaggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatca 30804199  T
Q  227 ttaatcatttaaaatttcgtcc 248  Q
    ||||||||||||||||||||||    
T  30804198 ttaatcatttaaaatttcgtcc 30804177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 20652076 - 20651935
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| ||  ||||||||| ||||||||||||||||| |   ||||||| |||||| || ||||| ||  |||||||| ||||||||    
T  20652076 aggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatcat 20651977  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||| | |||||||||| ||  ||||||||    
T  20651976 ttaaaatttcgtccctgaacccagttaattactgccacgtca 20651935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 21627712 - 21627825
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  || ||||| || |||||||||||||| |   |||||||||||||| || ||||||||  |||||||||||||||||    
T  21627712 aggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 21627811  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  21627812 ttaaaatttcgtcc 21627825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 11393233 - 11393121
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||||||||    ||||||||||||| || ||||||||  |||||||||||||||||    
T  11393233 aggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaatccttgcaaactagacttgcaatcattaatcat 11393134  T
Q  235 ttaaaatttcgtc 247  Q
    || ||||||||||    
T  11393133 ttcaaatttcgtc 11393121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 30337846 - 30337734
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| || |||||||||||||   |||| ||||||||| || ||||||||  ||||||||||||||||||    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatt 30337747  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  30337746 taaaatttcgtcc 30337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 8090357 - 8090228
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||||||||  |||||||| |||||| || |||| ||   ||||||   |||||||    
T  8090357 taggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatca 8090258  T
Q  234 tttaaaatttcgtccctcatcccagttaat 263  Q
    |||||||||| |||||| | ||||||||||    
T  8090257 tttaaaatttggtccctgagcccagttaat 8090228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 30725760 - 30725889
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| | |||| ||||||||| |  |||  ||   ||||| |  ||||||||||    
T  30725760 ggcttaaatatgtatttcattcttgcaattagggtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcattt 30725859  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||  |||| ||||||||    
T  30725860 aaaatttcgtccctctccccatttaatcac 30725889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 137 - 264
Target Start/End: Complemental strand, 15116660 - 15116532
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||| |||||||||||| ||  ||||||||||| ||||||||||||||||  | ||| ||||||||| || ||||||||  ||||||   |||||||||    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatt 15116561  T
Q  236 taaaatttcgtccctcatcccagttaatc 264  Q
    ||||| || |||||||| |||||||||||    
T  15116560 taaaaattggtccctcaacccagttaatc 15116532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 12408601 - 12408472
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  | |||||| |||| |||||||| |||||  ||||||||||||||| || |||| ||   ||||||   |||||||    
T  12408601 taggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatca 12408502  T
Q  234 tttaaaatttcgtccctcatcccagttaat 263  Q
    ||||||||||  ||||| | ||||||||||    
T  12408501 tttaaaatttgatccctgagcccagttaat 12408472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 21628142 - 21628001
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| |||||| ||||||||||||   |||| ||||||||| | ||||  ||   ||||| |  ||||||||    
T  21628142 aggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21628043  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||| |||||||  |||| ||||||||  ||||||||    
T  21628042 ttaaaattttgtccctctccccacttaatcactgccacgtca 21628001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 12407508 - 12407648
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  | |||||| || |||||||||||||||| | |||||||||||||| ||  ||| || | | ||||   |||||||||    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatt 12407607  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||| |||||| | || ||||||| ||  ||||||||    
T  12407608 taaaatttggtccctgaacctagttaattactgccacgtca 12407648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 30337447 - 30337579
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||    
T  30337447 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatca 30337546  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  30337547 tttaaaatttcgtccctctccccacttaatcac 30337579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 22617886 - 22617996
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaatt-ggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| ||| | || ||||||||||| || || ||||   ||||||  ||||||||||||    
T  22617886 ttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgggtctctgcattcgctaatccttgcagactacccttgcaaatattaatcattta 22617985  T
Q  238 aaatttcgtcc 248  Q
    |||| ||||||    
T  22617986 aaatgtcgtcc 22617996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 28498455 - 28498313
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| |||| || |||||||||||| || |||||||||||||  ||||| ||||||||| |  |||||||   |  |||   |||||||    
T  28498455 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatca 28498356  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||| |||||| | |||||||||||||  ||||||||    
T  28498355 tttaaaatttggtccctgagcccagttaatcactgccacgtca 28498313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 8089442 - 8089570
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||| | || ||||||||| |||||||||||||||||||   | || ||| ||||| || |||| ||   ||||| |  ||||||||    
T  8089442 aggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattgtttaatcat 8089541  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    |||||||||||||||| | |||| |||||    
T  8089542 ttaaaatttcgtcccttaacccacttaat 8089570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 266
Target Start/End: Original strand, 33517537 - 33517664
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  || |||||||| ||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  ||||||||||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 33517636  T
Q  239 aatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||  |||| ||||||||    
T  33517637 aatttcgtccctctccccacttaatcac 33517664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 29810866 - 29810724
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| |||| || |||||||||||| || |||||||||||||  ||||| || |||||| |  |||||||   |  |||   |||||||    
T  29810866 taggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatca 29810767  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||| |||||| | |||||||||||||  ||||||||    
T  29810766 tttaaaatttggtccctgagcccagttaatcactgccacgtca 29810724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 15115339 - 15115451
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||| | ||||||||||||||||   | || ||| ||||| || |||| |||  ||||||   |||||||||    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  15115439 taaaatttagtcc 15115451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 26464627 - 26464577
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||| ||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggt 26464577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 8418461 - 8418398
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaat 202  Q
    |||||||||||||| ||||  ||||||||||  ||||||||||||||||| ||||| ||||||||    
T  8418461 cttaaatatgtatt-catccttgcaattaggaatcgtttaaaaattggttcttgtaatcgctaat 8418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 28000700 - 28000652
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  28000700 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 28000652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 14194421 - 14194535
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||| ||||||||||||||||    
T  14194421 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatca 14194520  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  14194521 tttaaaatttcgtcc 14194535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 43159239 - 43159130
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  43159239 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatcatttaa 43159140  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  43159139 aatttcgtcc 43159130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 20814134 - 20814247
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  | ||||||| |||||||||||||||||| || ||||||||||||| || ||||||||| ||||||||||||||||    
T  20814134 taggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtctt-gtattcgctaatccttgcaaactagtattgcaatcattaatca 20814232  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  20814233 tttaaaatttcgtcc 20814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 6301545 - 6301655
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||| |  ||||||| ||||||||||||||||||  ||||||||||||||| || ||||||||| |||||||||||||| |||    
T  6301545 aggcttaaatatgtatttcattt--gcaattatggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagtcttgcaatcattaattatt 6301642  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  6301643 taaaatttcgtcc 6301655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 39453728 - 39453615
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| || |||||||||||||   ||||||||||||||||| ||||||||  |||||||||||||||||    
T  39453728 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcat 39453629  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  39453628 ttaaaatttcgtcc 39453615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 186847 - 186735
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||   |||||| |||||||||| ||||||||  ||||||||||||||||||    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatt 186748  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  186747 taaaatttcgtcc 186735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 16083372 - 16083261
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||| || |||||||||||||||||  | |||||||||||| || ||||||||| |||||||||||||||||    
T  16083372 aggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggttcatatattcgctaatccttgcaaactagtcttgcaatcattaatcat 16083273  T
Q  235 ttaaaatttcgt 246  Q
    ||||||||||||    
T  16083272 ttaaaatttcgt 16083261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 16156856 - 16156967
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||||||   ||||||||||| |||||||||||||||| | |||||||| ||||| || ||||||||| |||||||||||||||||||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 16156955  T
Q  237 aaaatttcgtcc 248  Q
    ||||||||||||    
T  16156956 aaaatttcgtcc 16156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 17202827 - 17202716
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||| |||   |||||||||||||| || ||||||||| ||||||||||||||||||    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 17202728  T
Q  236 taaaatttcgtc 247  Q
    ||||||||||||    
T  17202727 taaaatttcgtc 17202716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 6150850 - 6150736
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||| ||   |||||||| |||||||| ||||||||  ||||||||||||||||    
T  6150850 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatca 6150751  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  6150750 tttaaaatttcgtcc 6150736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 6301970 - 6301859
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||| |  |||||||||| ||||||||||||||||  ||||||||| ||||| || ||||||||| |||||||||||||||||    
T  6301970 aggcttaaatatgtatttcattt--gcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaactagtcttgcaatcattaatcat 6301873  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  6301872 ttaaaatttcgtcc 6301859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 28269420 - 28269534
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||    ||||||||||||| || ||||||||  ||||||||||||||||    
T  28269420 taggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatca 28269519  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  28269520 tttaaaatttcgtcc 28269534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 13963259 - 13963147
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||| |||||||||  || ||||| ||||||||||||||||||| | |||||||| ||||| || ||||||||| ||||||||||||||||    
T  13963259 taggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatca 13963160  T
Q  234 tttaaaatttcgt 246  Q
    |||||||||||||    
T  13963159 tttaaaatttcgt 13963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 27587543 - 27587431
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||  ||||||||||||||| || ||||||||  ||||||||||||||||||    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 27587444  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  27587443 taaaatttagtcc 27587431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 266
Target Start/End: Complemental strand, 37992714 - 37992586
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||||| |||||||||||| | | | | |||| |||||||||| ||||||||  ||||||||||||||| ||||    
T  37992714 cttaaatatgtatttcatccatgcaattaggggtcgtttaaaaatcgatctctctatttgctaatctttgcaaactagccttgcaatcattaatcgttta 37992615  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||||||||    
T  37992614 aaatttcgtccctcatccttgttaatcac 37992586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 5994304 - 5994205
Alignment:
Q  150 atttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    ||||||||  |||||||| ||||||||||||||||||||  |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  5994304 atttcatccttgcaattaagggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcc 5994205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 35512546 - 35512431
Alignment:
Q  133 actaggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaat 231  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||   ||||||||| |||| || ||||||||  ||||||||||||||    
T  35512546 actagacttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaat 35512447  T
Q  232 catttaaaatttcgtc 247  Q
    ||||||||||||||||    
T  35512446 catttaaaatttcgtc 35512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 38442494 - 38442383
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||| |||| ||||||||| ||||| || ||||||||  ||||||||||||| |||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatgggttcttgtattcgttaatccttgcaaactagccttgcaatcattaaccattt 38442395  T
Q  237 aaaatttcgtcc 248  Q
    ||||||||||||    
T  38442394 aaaatttcgtcc 38442383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 11762146 - 11762033
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  11762146 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 11762047  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  11762046 ttaaaatttagtcc 11762033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 18247505 - 18247404
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||| ||||| | |||||||||||||| || ||||||||| |||||||||||||||||    
T  18247505 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 18247406  T
Q  235 tt 236  Q
    ||    
T  18247405 tt 18247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 19518034 - 19517928
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  ||||||||||| | ||||||||||| ||   ||||||||||||||||| ||||||||  |||||||||||||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaatctttgcaaactagccttgcaatcattaatcattt 19517935  T
Q  237 aaaattt 243  Q
    |||||||    
T  19517934 aaaattt 19517928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 19892310 - 19892420
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||| ||||| || ||||||||  ||| ||||||||||||||||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcattta 19892409  T
Q  238 aaatttcgtcc 248  Q
    |||||||||||    
T  19892410 aaatttcgtcc 19892420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 37991197 - 37991311
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||| | |||||| |||||||||||| ||||||||||||||||   |||||||| ||||| || ||||||||  ||||||||||||||||    
T  37991197 taggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatca 37991296  T
Q  234 tttaaaatttcgtcc 248  Q
    ||| |||||||||||    
T  37991297 tttcaaatttcgtcc 37991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 11741944 - 11741815
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  || |||||||| || ||||||||| ||| | ||||||||||||||||| ||||||||  ||||| || ||||||||||    
T  11741944 gcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctttaatcattt 11741845  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||| |   |||||||||||||    
T  11741844 aaaatttcgtcctttgacccagttaatcac 11741815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 21257586 - 21257453
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||    |||||||||||||| || ||||||||  |||| ||||||||||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaatccttgcaaactagccttgcgatcattaatcatttaa 21257487  T
Q  239 aatttcgtccctcatcccagttaatcacgaccac 272  Q
    || |||||| |  | |||||||||| || |||||    
T  21257486 aaattcgtctcggaacccagttaattactaccac 21257453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 5024019 - 5024131
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||| |   |||||||||||||| || ||||||||  ||||||||| ||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatacatgtattcgctaatccttgcaaactagccttgcaatcactaatcatt 5024118  T
Q  236 taaaatttcgtcc 248  Q
    |||||||| ||||    
T  5024119 taaaattttgtcc 5024131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 248
Target Start/End: Complemental strand, 8322827 - 8322720
Alignment:
Q  142 aaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaa 240  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||    ||||||| ||||| || ||||||||  |||||||||||||||||||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaa 8322728  T
Q  241 tttcgtcc 248  Q
    ||||||||    
T  8322727 tttcgtcc 8322720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 20840867 - 20840760
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||||||||   |||| ||||||||| |  ||||||||| ||||||||||||||||    
T  20840867 taggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaatcctagcaaactagtcttgcaatcattaatca 20840768  T
Q  234 tttaaaat 241  Q
    ||||||||    
T  20840767 tttaaaat 20840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 42265734 - 42265841
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||| || ||||| ||    
T  42265734 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcattctttaatgat 42265833  T
Q  235 ttaaaatt 242  Q
    ||||||||    
T  42265834 ttaaaatt 42265841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 6150453 - 6150583
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||| || |||||| | ||||  |||| ||||| |  ||||||||    
T  6150453 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtaatcactaatcctgacaatttagtcttgcattgtttaatcat 6150552  T
Q  235 ttaaaatttcgtccctcatcccagttaatca 265  Q
    |||||||||||||||||  |||| |||||||    
T  6150553 ttaaaatttcgtccctctccccacttaatca 6150583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 3528872 - 3528985
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||| ||||||| || ||||||||  |||||||| ||||||||    
T  3528872 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcat 3528971  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  3528972 ttaaaatttagtcc 3528985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 11047861 - 11047753
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||| ||||| ||||||||||||||||  | |||||| |||||| || ||||||||  |||||||||||||||||||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtcat-gtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 11047763  T
Q  239 aatttcgtcc 248  Q
    ||||||||||    
T  11047762 aatttcgtcc 11047753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 28770867 - 28770976
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  || |||||||| ||||    
T  28770867 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattgatca 28770966  T
Q  234 tttaaaattt 243  Q
    ||||||||||    
T  28770967 tttaaaattt 28770976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 32242670 - 32242558
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| | ||||||||||| ||  | ||||||||||||| || ||||||||  |||||||||||||||||    
T  32242670 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtcct-gtattcgctaatccttgcaaactagccttgcaatcattaatcat 32242572  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  32242571 ttaaaattttgtcc 32242558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 10684362 - 10684255
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||| ||   |||||| |||||| || ||||||||| |||||||||||||||||||||    
T  10684362 ttaaatatgtatttcatctttgcaattaaaggtcgtttaaaaattgattcc-gtattcactaatccttgcaaactagtcttgcaatcattaatcatttaa 10684264  T
Q  239 aatttcgtc 247  Q
    | |||||||    
T  10684263 agtttcgtc 10684255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 135 - 247
Target Start/End: Original strand, 27937053 - 27937164
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||||||||  |||||||||||  | || ||| ||||| | | |||||||||||| || ||||||||  |||||||||||||||||    
T  27937053 taggcttaaatatgtatttcatccttgcaattaggggtgatttaaa-ttggtctctatattcgctaatccttgcaaactagccttgcaatcattaatcat 27937151  T
Q  235 ttaaaatttcgtc 247  Q
    |||||||||||||    
T  27937152 ttaaaatttcgtc 27937164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 35920229 - 35920340
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  |  |||||||| ||||||||||||||||   |||||||||||||| || |||| |||  |||||||||||||||||||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcattt 35920328  T
Q  237 aaaatttcgtcc 248  Q
    ||||||||||||    
T  35920329 aaaatttcgtcc 35920340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 38475033 - 38475144
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||   |||||||  |||| |||||||||||||   |||||||||||||| || |||||||   ||||||||||||||||||    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 38475132  T
Q  236 taaaatttcgtc 247  Q
    ||||||||||||    
T  38475133 taaaatttcgtc 38475144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 29646360 - 29646469
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  || |||||||| || |||||||||||||   |||||||||||||| || ||||||||  || |||||||||||||    
T  29646360 taggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatca 29646459  T
Q  234 tttaaaattt 243  Q
    ||||||||||    
T  29646460 tttaaaattt 29646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 136 - 263
Target Start/End: Original strand, 5835622 - 5835750
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||| | |  |||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||   ||||||   ||||||||    
T  5835622 aggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagtttaatcat 5835721  T
Q  235 ttaaaatttcgtccctcatcccagttaat 263  Q
    ||||||||| ||| || | ||||||||||    
T  5835722 ttaaaatttggtctctgagcccagttaat 5835750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 5835851 - 5835748
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  |||||||||| || |||||||||||||||| |||||||||||||| || |||| |||  ||||||   ||||||||||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatcatttaa 5835752  T
Q  239 aatt 242  Q
    ||||    
T  5835751 aatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 11740690 - 11740799
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||| |   | |||||||||||| || ||||||||  ||||| || ||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatatattcgctaatccttgcaaactagccttgcattctttaatcatttaa 11740789  T
Q  239 aatttcgtcc 248  Q
    ||||| ||||    
T  11740790 aattttgtcc 11740799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 21265167 - 21265255
Alignment:
Q  161 gcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    |||||||| ||||||||||||||||||   |||||| ||||||| || ||||||||  |||||||||||||| ||||||||||||||||    
T  21265167 gcaattagaggtcgtttaaaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcc 21265255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 139 - 266
Target Start/End: Original strand, 39453302 - 39453430
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||| | |||| ||||||||| |  |||  ||   ||||| |  |||||||||||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 39453401  T
Q  238 aaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||  |||| ||||||||    
T  39453402 aaatttcgtccctctccccacttaatcac 39453430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 5024443 - 5024316
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||| ||||||||| | ||||  ||   ||||| |  ||||||||||||    
T  5024443 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaa 5024344  T
Q  239 aatttcgtccctcatcccagttaatcac 266  Q
    |||||||| ||||  |||| ||||||||    
T  5024343 aatttcgttcctctccccacttaatcac 5024316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 38475432 - 38475297
Alignment:
Q  132 tactaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaa 230  Q
    ||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||   |||| ||| ||||| | ||||  ||   ||||| |  ||||    
T  38475432 tactaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaa 38475333  T
Q  231 tcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||||||  |||| ||||||||    
T  38475332 tcatttaaaatttcgtccctctccccacttaatcac 38475297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 5993887 - 5994019
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||  |  |||  ||   ||||| |  |||||||    
T  5993887 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatca 5993986  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  5993987 tttaaaatttcgtccctctccccacttaatcac 5994019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 35512146 - 35512278
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| ||||||||||||||||||  ||||||| ||||||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||    
T  35512146 taggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 35512245  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  35512246 tttaaaatttcgtccctctccccacttaatcac 35512278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 266
Target Start/End: Original strand, 38442075 - 38442198
Alignment:
Q  144 atatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatt 242  Q
    ||||||||||||||  ||||||||||| |  |||||||||||||  ||||| ||||||||| | ||||  || | ||||| |  ||||||||||||||||    
T  38442075 atatgtatttcatcgttgcaattaggggttatttaaaaattggtcattgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatt 38442174  T
Q  243 tcgtccctcatcccagttaatcac 266  Q
    |||||||||  |||| ||||||||    
T  38442175 tcgtccctctccccacttaatcac 38442198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 276
Target Start/End: Complemental strand, 19892734 - 19892596
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||| | |||| ||| ||||| | ||||  ||   ||||| |  |||||||||||    
T  19892734 cttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcattta 19892635  T
Q  238 aaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||  ||  |||| ||||||||  ||||||||    
T  19892634 aaatttcgtcattctccccacttaatcactgccacgtca 19892596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 32242240 - 32242382
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||||||||| |   |||| | ||||||| |  |||  || | ||||| |  |||||||    
T  32242240 tagggttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatca 32242339  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||  |||| ||||||||  ||||||||    
T  32242340 tttaaaatttcgtccctctccccacttaatcactgccacgtca 32242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 35920612 - 35920482
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||   ||||||| |||||||||||||||||||   |||| ||||||||| | ||||  ||   || || |  |||||||||    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatt 35920513  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  35920512 taaaatttcgtccctctccccacttaatcac 35920482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 20814565 - 20814496
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| |||||||||    
T  20814565 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaatc 20814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 20840530 - 20840583
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  20840530 ctaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 20840583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 24547554 - 24547413
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||  || || ||||||||| |  |||  ||   ||||| |  ||||||||    
T  24547554 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatcat 24547455  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  |||| |||| |||  ||||||||    
T  24547454 ttaaaatttcgtccctctccccacttaaccactgccacgtca 24547413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 13362653 - 13362589
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||| |||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatc 13362589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 203
Target Start/End: Complemental strand, 21265571 - 21265503
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||||  | |||||| ||||||||||||||||||||  |||| |||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaatc 21265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 16157284 - 16157233
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  16157284 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 13362290 - 13362339
Alignment:
Q  199 taatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    ||||| || ||||||||  |||||||||||||||||||||||||||||||    
T  13362290 taatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 13362339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 18247087 - 18247136
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 18247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 11761748 - 11761816
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| |||||||||    
T  11761748 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 11761816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 18670201 - 18670269
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||||  ||||| || |||||||||||||||||||   |||| |||||||||    
T  18670201 aggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaatc 18670269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 28269809 - 28269762
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaat 182  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  28269809 taggcttaaatatgtatttcatct-tgcaattaggggtcgtttaaaaat 28269762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 17202398 - 17202529
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||| |||||||||  | ||||||||| ||||||||||||||||   |||| ||||||||| | ||||  ||   ||||| |  |||| |||    
T  17202398 aggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcat 17202497  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||| |  |||| ||||||||    
T  17202498 ttaaaatttcgtccccctccccacttaatcac 17202529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 24547262 - 24547301
Alignment:
Q  208 caaactagttttgcaatcattaatcatttaaaatttcgtc 247  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  24547262 caaactagccttgcaatcattaatcatttaaaatttcgtc 24547301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 27587148 - 27587215
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| |||||||||    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 27587215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 3529270 - 3529220
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||||||| |||  |||||||| |||||||||||||||||||    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggt 3529220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 22869695 - 22869745
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||| |||||||||||||||||||| |||| |||||||||  ||||||||    
T  22869695 attaaccatttaaaatttcgtccctcttcccggttaatcactgccacgtca 22869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 266
Target Start/End: Complemental strand, 28771266 - 28771136
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| |||  || |||||||| ||||||||||||||||   |||| |||||||||||  |||  ||    || | |  |||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgtattgtttaatcatt 28771167  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  28771166 taaaatttcgtccctctccccacttaatcac 28771136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 42063345 - 42063395
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtcag 277  Q
    ||||||||||||||||| |||||||||| ||| |||||||  |||||||||    
T  42063345 ttaatcatttaaaattttgtccctcatcacaggtaatcactgccacgtcag 42063395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 186510 - 186559
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||  |||| |||||||| |||| ||||    
T  186510 ttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtca 186559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 176
Target Start/End: Original strand, 13362248 - 13362289
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagggtcgttt 176  Q
    |||| ||||||||||||||||||  |||||||||||||||||    
T  13362248 taggtttaaatatgtatttcatccttgcaattagggtcgttt 13362289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 20857023 - 20857072
Alignment:
Q  227 ttaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||| |||||||||||||| |||| |||||||||  ||||||||    
T  20857023 ttaatcatttgaaatttcgtccctcttcccggttaatcactgccacgtca 20857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 24547175 - 24547256
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactag 215  Q
    |||||||||||||||| || |||  |||||||| |||||||| ||||||||||   |||| ||||||||| || ||||||||    
T  24547175 taggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatccttgcaaactag 24547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 27937424 - 27937379
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattg 184  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||    
T  27937424 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 6758180 - 6758132
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  6758180 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 6758132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 13962862 - 13962914
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    ||||||||||||| ||||| |||  |||||||| |||||||||||||||||||    
T  13962862 taggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggt 13962914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 41930598 - 41930646
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  41930598 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 41930646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 8e-34; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 28469009 - 28469122
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||  || ||||||||||||||| ||||||||  |||||||||||||||||    
T  28469009 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatcat 28469108  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  28469109 ttaaaatttcgtcc 28469122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 5457337 - 5457195
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||||||  ||||||||| ||||| || |||| ||   || ||||  |||||||    
T  5457337 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatca 5457238  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  5457237 tttaaaatttcgtccctcatcccagttaatcactgccacgtca 5457195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 10936223 - 10936110
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| | ||||||||||||||  ||||||||||||||| || ||||||||  |||||||||||||||||    
T  10936223 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcat 10936124  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  10936123 ttaaaatttcgtcc 10936110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Original strand, 2640177 - 2640290
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||||||||   |||||||||||||| || |||| |||| |||||||||||||||||    
T  2640177 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaatccttgcaaattagtcttgcaatcattaatcat 2640276  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  2640277 ttaaaatttcgtcc 2640290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 6253869 - 6253756
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||  ||||||||||||||| || ||||| ||| |||||||||||||||||    
T  6253869 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaacaagtcttgcaatcattaatcat 6253770  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  6253769 ttaaaatttagtcc 6253756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 24389214 - 24389101
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||    
T  24389214 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 24389115  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||| ||||    
T  24389114 ttaaaattttgtcc 24389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 42019598 - 42019707
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||   |||||||||||||| || |||||||| |||| |||||||||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagctttgtaatcattaatcattt 42019697  T
Q  237 aaaatttcgt 246  Q
    ||||||||||    
T  42019698 aaaatttcgt 42019707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 40380112 - 40380000
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||   ||||||||| |||| || ||||||||  ||||||||||||||||||    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatt 40380013  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  40380012 taaaatttcgtcc 40380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 47945356 - 47945468
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||  |||||||||||||| || ||||||||  |||||||||||||||||    
T  47945356 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 47945455  T
Q  235 ttaaaatttcgtc 247  Q
    |||||||||||||    
T  47945456 ttaaaatttcgtc 47945468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 47950786 - 47950898
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||| ||||||||||||||||  ||||||| ||| |||||||||||||||||  |||||||||||||| || ||||||||  |||||||||||||||||    
T  47950786 aggctcaaatatgtatttcatcgttgcaattggggatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagcattgcaatcattaatcat 47950885  T
Q  235 ttaaaatttcgtc 247  Q
    |||||||||||||    
T  47950886 ttaaaatttcgtc 47950898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 48788801 - 48788911
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||||||   ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||    
T  48788801 taggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatca 48788900  T
Q  234 tttaaaatttc 244  Q
    |||||||||||    
T  48788901 tttaaaatttc 48788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 27396628 - 27396737
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagggtc-gtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  || |||||||| | ||||||||||||||   |||||||||||||| || ||||||||| |||||||||||||||||    
T  27396628 aggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 27396727  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  27396728 ttaaaatttc 27396737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 17102419 - 17102305
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| |  ||||||||  ||||||||||||||||    
T  17102419 taggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatca 17102320  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||| ||||    
T  17102319 tttaaaatttagtcc 17102305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 27992133 - 27992024
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||| |||  ||||||||||| ||||||||||||||||   |||||||||||||| || ||||||||  |||||||||||||||||||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 27992034  T
Q  239 aatttcgtcc 248  Q
    ||||| ||||    
T  27992033 aatttagtcc 27992024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 42362450 - 42362578
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||||| |||||||||||||||||  ||||||||| ||||| || |||| ||   ||||| || |||||||||    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatt 42362549  T
Q  236 taaaatttcgtccctcatcccagttaatc 264  Q
    ||||||||||||| | | |||||||||||    
T  42362550 taaaatttcgtcctttaacccagttaatc 42362578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 160 - 276
Target Start/End: Original strand, 17885651 - 17885768
Alignment:
Q  160 tgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtccctcatcccag 258  Q
    ||||||||||| ||||||||||||||||   ||||||| |||||| || ||||||||  ||||||||||||||||||||||||||||||| |   |||||    
T  17885651 tgcaattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccag 17885750  T
Q  259 ttaatcacgaccacgtca 276  Q
    ||||||||  ||||||||    
T  17885751 ttaatcactgccacgtca 17885768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 275
Target Start/End: Complemental strand, 45011034 - 45010893
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| |||||||||||||||||  |||||||||||||| || |||  ||   ||||| |  |||||||    
T  45011034 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatca 45010935  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtc 275  Q
    |||||||||||||| |||  |||| ||||||||  |||||||    
T  45010934 tttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 264
Target Start/End: Original strand, 33808323 - 33808451
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||||||   || ||||| | ||||||||||||||||| | |||||||||||||| || |||| |||| ||||| || |||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaatccttgcaaattagtcttgcattctttaatcatt 33808422  T
Q  236 taaaatttcgtccctcatcccagttaatc 264  Q
    ||||||||||||| |   |||||||||||    
T  33808423 taaaatttcgtccattgacccagttaatc 33808451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 40379774 - 40379898
Alignment:
Q  142 aaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaa 240  Q
    ||||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||| || |||  ||  |||| | |  ||||||||||||||    
T  40379774 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaatccttgcaatttacctttgtattgtttaatcatttaaaa 40379873  T
Q  241 tttcgtccctcatcccagttaatca 265  Q
    |||||||||||  |||| |||||||    
T  40379874 tttcgtccctctccccacttaatca 40379898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 17886920 - 17886778
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  ||||||||||| || ||||||||||| |   |||||||| ||||| || |||||||   ||||||  ||||||||    
T  17886920 taggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatca 17886821  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||   |||| ||||||||  ||||||||    
T  17886820 tttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 42731849 - 42731735
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  || |||||||| |||||||||||||| |   | ||| |||||||| || ||| |||| |||||||| ||||||||    
T  42731849 taggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattgatccctatatccgctaatccttgcaagctagctttgcaattattaatca 42731750  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  42731749 tttaaaatttcgtcc 42731735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 3914560 - 3914458
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||||||    |||||||| |||||||||||| |||||   |||||||||||||| || ||||||||  |||||||||||||||||||    
T  3914560 gcttaaatatgtatttcat----gcaattagaggtcgtttaaaa-ttggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcattt 3914466  T
Q  237 aaaatttc 244  Q
    ||||||||    
T  3914465 aaaatttc 3914458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 19204884 - 19204778
Alignment:
Q  139 cttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattta 237  Q
    |||||||||| |||| |||  | ||||||||| | |||||||||||||||  |||| ||||||||| || |||||||| ||||||||||||||| |||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaatccttgcaaactagctttgcaatcattaattattta 19204785  T
Q  238 aaatttc 244  Q
    |||||||    
T  19204784 aaatttc 19204778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 28469438 - 28469296
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||| ||||| |  |||  ||   ||||| |  |||||||    
T  28469438 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatca 28469339  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||  |||| |||||||| |||||||||    
T  28469338 tttaaaatttcgtccctctccccacttaatcactaccacgtca 28469296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 20426760 - 20426691
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||   ||||||||||||||    
T  20426760 taggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatc 20426691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 32053142 - 32053251
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  || ||||| ||||||||||||||| |||   | ||| || ||||| || ||||||||  |||||||||||||||||    
T  32053142 aggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtccctatatacgataatccttgcaaactagccttgcaatcattaatcat 32053241  T
Q  235 ttaaaatttc 244  Q
    ||||||||||    
T  32053242 ttaaaatttc 32053251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 228
Target Start/End: Original strand, 32298776 - 32298869
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcatt 228  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||| ||||   |||||||||||||| || ||||||||| |||||||||||    
T  32298776 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaatccttgcaaactagtcttgcaatcatt 32298869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 276
Target Start/End: Complemental strand, 43124548 - 43124440
Alignment:
Q  168 gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcacg 267  Q
    ||||| |||||||||||||   |||| ||||||||| ||||||||||   ||||| |  ||||||||||||||||||||||||  ||||||||||||||     
T  43124548 gggtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcact 43124449  T
Q  268 accacgtca 276  Q
     ||||||||    
T  43124448 gccacgtca 43124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 243
Target Start/End: Complemental strand, 13386175 - 13386068
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||||| ||   ||||||||||| ||||||||||||||||   | |||||||||||| || ||||||||  |||||||  |||||||||    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatt 13386076  T
Q  236 taaaattt 243  Q
    ||||||||    
T  13386075 taaaattt 13386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 265
Target Start/End: Original strand, 20425476 - 20425607
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||| |||||| |||||||||||| || ||||||||||||||  |||| ||| |||||||  |||||||   |  |||   |||||||    
T  20425476 taggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggcaaactaccctctcaaaatttaatca 20425575  T
Q  234 tttaaaatttcgtccctcatcccagttaatca 265  Q
     |||||||||||||||||| || |||||||||    
T  20425576 cttaaaatttcgtccctcaaccaagttaatca 20425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 276
Target Start/End: Complemental strand, 27397025 - 27396883
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| | ||||   |    |||| |  |||||||    
T  27397025 taggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatca 27396926  T
Q  234 tttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||  |||| ||||||||  ||||||||    
T  27396925 tttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 24388821 - 24388886
Alignment:
Q  139 cttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||| | ||||||||||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatc 24388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 47946901 - 47946792
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  || |||||||  |||||||||||| ||| | |||||||||||  | || |||| |||| |||||||||||||| ||||    
T  47946901 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattattt 47946802  T
Q  237 aaaatttcgt 246  Q
    ||||||||||    
T  47946801 aaaatttcgt 47946792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 47952331 - 47952222
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  || |||||||  |||||||||||| ||| | |||||||||||  | || |||| |||| |||||||||||||| ||||    
T  47952331 gcttaaatatgtattttatccttgtaattaggaatcgtttaaaaatcggtctctgtattcgctatcccttccaaattagtcttgcaatcattaattattt 47952232  T
Q  237 aaaatttcgt 246  Q
    ||||||||||    
T  47952231 aaaatttcgt 47952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 23181421 - 23181307
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    ||||||||||||||||||||  |||||||| |||||||||||| ||||||   |||| |||||||||||  |||  ||   ||||| |  ||||||||||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T
Q  237 aaaatttcgtccctc 251  Q
    |||||||||||||||    
T  23181321 aaaatttcgtccctc 23181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 42731419 - 42731549
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||||||||  ||||| ||||||||| |  |||  ||    |||| |  |||||||||    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 42731518  T
Q  236 taaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||  |||| ||||||||    
T  42731519 taaaatttcgtccctctccccacttaatcac 42731549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 43123175 - 43123253
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaacta 214  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||   ||||||| |||||| || |||||||    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaacta 43123253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 276
Target Start/End: Complemental strand, 18087743 - 18087626
Alignment:
Q  160 tgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtccctcatcccag 258  Q
    ||||||||||| || |||||||||||||   |||| ||||||||| || |||| |||  ||||||| |||||||||||||||||| |||||| | ||||     
T  18087743 tgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaattttgtcccttaacccac 18087644  T
Q  259 ttaatcacgaccacgtca 276  Q
    ||||| ||  ||||||||    
T  18087643 ttaatgactgccacgtca 18087626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 29144412 - 29144360
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  29144412 taggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt 29144360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 6571012 - 6571143
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||| ||||| | ||||  ||   ||||| |  ||||||||    
T  6571012 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcat 6571111  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||| |||||||  |||| ||||||||    
T  6571112 ttaaaattttgtccctctccccacttaatcac 6571143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 10935794 - 10935909
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||| |||||||||||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||||    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10935893  T
Q  236 taaaatttcgtccctc 251  Q
    ||||||||||||||||    
T  10935894 taaaatttcgtccctc 10935909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 13384501 - 13384616
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||| |||| || ||||||| ||||||||| |||||| |||||| |||||   |||| ||||||||| |  |||||||   |||||| | ||||||||    
T  13384501 aggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatcat 13384600  T
Q  235 ttaaaatttcgtccct 250  Q
    ||||||||||||||||    
T  13384601 ttaaaatttcgtccct 13384616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 17102019 - 17102150
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||    |||| |  ||||||||    
T  17102019 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 17102118  T
Q  235 ttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||||  |||| ||||||||    
T  17102119 ttaaaatttcgtccctctccccacttaatcac 17102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 12644143 - 12644093
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||| |||| |||||||||  ||||||||    
T  12644143 attaatcatttaaaatttcgtccctcttcccggttaatcactgccacgtca 12644093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 263
Target Start/End: Original strand, 18086286 - 18086416
Alignment:
Q  134 ctaggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatc 232  Q
    |||||||| ||||||| |||  ||  |||||||||| |||||||||||||||||   ||||  || ||||| || |||| |||  ||||||| |||||||    
T  18086286 ctaggctttaatatgtgtttagtccttgcaattaggagtcgtttaaaaattggtccctgtaaacgataatccttgcaaattagccttgcaattattaatc 18086385  T
Q  233 atttaaaatttcgtccctcatcccagttaat 263  Q
    | ||||||||||||||||   ||||||||||    
T  18086386 acttaaaatttcgtcccttgacccagttaat 18086416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 22871362 - 22871420
Alignment:
Q  190 tgtattcgctaatctttacaaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    |||| ||||||||| || ||||| ||| ||||||| |||||||||||||||||||||||    
T  22871362 tgtaatcgctaatccttgcaaaccagtcttgcaattattaatcatttaaaatttcgtcc 22871420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 28105499 - 28105548
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatt-agggtcgtttaaaaatt 183  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  28105499 taggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatt 28105548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 29141605 - 29141556
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattag-ggtcgtttaaaaattg 184  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  29141605 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 32299132 - 32299003
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| |||  |||||||||| |||||||||||||||||   |||| ||||||||| |  |||  ||   ||||| |  |||||||||     
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattg 32299033  T
Q  237 aaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||||||||||  |||| ||||||||    
T  32299032 aaaatttcgtccctctccccacttaatcac 32299003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 37656855 - 37656919
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    ||||||||||||||||||  ||||||||||  |||||||||||||||| | |||| |||||||||    
T  37656855 ttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaatc 37656919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 37657265 - 37657217
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattg 184  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattg 37657217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 42020022 - 42019914
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||||||  | || |||||||||||  |||  || | ||||| |  ||||| ||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaatcttggcaatttactcttgcattgtttaattatttaa 42019923  T
Q  239 aatttcgtc 247  Q
    |||||||||    
T  42019922 aatttcgtc 42019914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 34793903 - 34793954
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||||| ||| |||||| || |||||||||||||||||||    
T  34793903 aggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggt 34793954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 1960302 - 1960176
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcattt 236  Q
    |||||||||||||||| ||| |||||| ||||| ||| |||||| |||||  ||| |||| |||||| || ||||| |    |||||| |||||||||||    
T  1960302 gcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtccttgcattcactaatccttgcaaacaaaccctgcaattattaatcattt 1960203  T
Q  237 aaaatttcgtccctcatcccagttaat 263  Q
    |||| || |||| ||  ||||||||||    
T  1960202 aaaaattggtccttctacccagttaat 1960176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 4226215 - 4226265
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||||||||| || |||| |||||||||  ||||||||    
T  4226215 attaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtca 4226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 6253472 - 6253538
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||||||| |||  |||||||| |||||||||||||||||||   |||| |||||||||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatc 6253538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 248
Target Start/End: Complemental strand, 37657196 - 37657166
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtcc 248  Q
    |||||||||||||||||||||||||||||||    
T  37657196 ttgcaatcattaatcatttaaaatttcgtcc 37657166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 45914614 - 45914664
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||||||||||| ||||  ||||||||  ||||||||    
T  45914614 attaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtca 45914664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 30127440 - 30127489
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattg 184  Q
    |||||||||||||||||  ||| |||||||||||| ||||||||||||||    
T  30127440 aggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaattg 30127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 34799585 - 34799536
Alignment:
Q  138 gcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggt 186  Q
    |||||||||||||||| ||| |||||| || |||||||||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggt 34799536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 6571304 - 6571264
Alignment:
Q  208 caaactagttttgcaatcattaatcatttaaaatttcgtcc 248  Q
    ||||||||  ||||||| |||||||||||||||||||||||    
T  6571304 caaactagccttgcaattattaatcatttaaaatttcgtcc 6571264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 22828247 - 22828116
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||| |||| |||||||  || |||||||| || |||||||||||||  ||||| ||| ||||||| ||||| ||    ||||| | |||||||    
T  22828247 taggcttaaa-atgtgtttcatccttgtaattaggggtcatttaaaaattggtccttgtaatcgttaatcttgacaaattacccctgcaaaccttaatca 22828149  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||| || || | |||| ||||||||    
T  22828148 tttaaaatttcatcacttaacccacttaatcac 22828116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 32680910 - 32680862
Alignment:
Q  218 ttgcaatcattaatcatttaaaatttcgtccctcatcccagttaatcac 266  Q
    |||||||  |||||||||||||||||||||||||  |||| ||||||||    
T  32680910 ttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcac 32680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 250
Target Start/End: Complemental strand, 32688648 - 32688532
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||| ||||||| ||||  |  ||||||||||| || ||||||| |||||  ||||| ||||||||| | ||||| |    ||||||  ||||||||    
T  32688648 taggctttaatatgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatca 32688549  T
Q  234 tttaaaatttcgtccct 250  Q
    |||||||||||||||||    
T  32688548 tttaaaatttcgtccct 32688532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 6508 - 6395
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||||||||   |||||||||||||| || |||| |||  |||||||||||||||||    
T  6508 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcat 6409  T
Q  235 ttaaaatttcgtcc 248  Q
    ||||||||||||||    
T  6408 ttaaaatttcgtcc 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 69393 - 69281
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||||   |||||||||||||| || ||||||||  ||||||||||||||||||    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 69294  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  69293 taaaatttcgtcc 69281  T

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Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 68965 - 69105
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||||||   |||| || |||||| |  |||  ||   ||||| |  |||||||||    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  236 taaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||||||  |||| ||||||||  ||||||||    
T  69065 taaaatttcgtccctctccccacttaatcactgccacgtca 69105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 135 - 243
Target Start/End: Original strand, 14427 - 14536
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||| || | | |||||||||||| || ||||||||  ||||||||||||||||    
T  14427 taggcttaaatatgtatttcatcattgcaattaggagtcgtttaaaaattagtctatttattcgctaatccttgcaaactagccttgcaatcattaatca 14526  T
Q  234 tttaaaattt 243  Q
    ||||||||||    
T  14527 tttaaaattt 14536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 14818 - 14751
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatc 203  Q
    |||||||||||| ||||||||  |||||||| ||||||||||||||||||| | | || |||||||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatc 14751  T

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Target: scaffold0775 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 4960 - 5074
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||| |   | |||||||||||| || ||||||||  ||||||| ||||||||    
T  4960 taggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatca 5059  T
Q  234 tttaaaatttcgtcc 248  Q
    |||||||||||||||    
T  5060 tttaaaatttcgtcc 5074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 37564 - 37676
Alignment:
Q  137 ggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatt 235  Q
    ||||||||||| |||||||||  ||||||||| | ||||||||||||||||  ||||||||||||||  |  ||||||| | ||||||||||||||||||    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 37663  T
Q  236 taaaatttcgtcc 248  Q
    |||||||||||||    
T  37664 taaaatttcgtcc 37676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 37992 - 37851
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattagg-gtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||||||| |||||| ||||||||| | ||||  ||   ||| | |  ||||||||    
T  37992 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatcat 37893  T
Q  235 ttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    |||||||||||||||||  |||| ||||||||  ||||||||    
T  37892 ttaaaatttcgtccctctccccacttaatcactgccacgtca 37851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 2170 - 2059
Alignment:
Q  136 aggcttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcat 234  Q
    |||||||||||||||||| |||  ||||||||||| ||||||||||||||||   || | | |||||||||| |||||||   |||||||||||||||||    
T  2170 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcat 2071  T
Q  235 ttaaaatttcgt 246  Q
    ||||||||||||    
T  2070 ttaaaatttcgt 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 1767 - 1899
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    ||||||||||||||||||| |||  |||||||| |||||||| ||||||||||   |||| |||||||||||  |||  ||   ||||| |  |||||||    
T  1767 taggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatca 1866  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  1867 tttaaaatttcgtccctctccccacttaatcac 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 140066 - 139957
Alignment:
Q  140 ttaaatatgtatttcatctctgcaattaggg-tcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    |||||||||||||| |||  ||||||||||| | ||||||||||||||   ||||||| |||||  || ||||||||  |||||||||||||| ||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaactagccttgcaatcattaattatttaa 139967  T
Q  239 aatttcgtcc 248  Q
    ||||| ||||    
T  139966 aatttagtcc 139957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 266
Target Start/End: Original strand, 139670 - 139802
Alignment:
Q  135 taggcttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatca 233  Q
    |||| |||||||||||||| |||  |||||||| |||||||||||||||||||   |||| ||||||||| |  |||  ||    || | | ||||||||    
T  139670 taggattaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccatgaattgattaatca 139769  T
Q  234 tttaaaatttcgtccctcatcccagttaatcac 266  Q
    ||||||||||||||||||  |||| ||||||||    
T  139770 tttaaaatttcgtccctctccccacttaatcac 139802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 19860 - 19967
Alignment:
Q  140 ttaaatatgtatttcatctctgcaatta-gggtcgtttaaaaattggtttttgtattcgctaatctttacaaactagttttgcaatcattaatcatttaa 238  Q
    ||||||||||||||| ||  |||||||| |||||||||||||||||||   |||  ||||||||| || |||| ||  |||||| || ||||||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaatccttgcaaattacctttgcattctttaatcatttaa 19959  T
Q  239 aatttcgt 246  Q
    ||||||||    
T  19960 aatttcgt 19967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 13699 - 13749
Alignment:
Q  226 attaatcatttaaaatttcgtccctcatcccagttaatcacgaccacgtca 276  Q
    ||||||||||||| ||||||||||||  |||| |||||||| |||||||||    
T  13699 attaatcatttaagatttcgtccctctccccacttaatcactaccacgtca 13749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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