View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7639_low_9 (Length: 326)
Name: NF7639_low_9
Description: NF7639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7639_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 22 - 312
Target Start/End: Complemental strand, 34928834 - 34928545
Alignment:
| Q |
22 |
ccaatactaataactaagaatctaccctattacttattcttgtcttacataaatctaaaaaattaaatgctagtacgtccttcttcaaagaaataggtta |
121 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
34928834 |
ccaatactaataactaagaatctaccctattacttattcttgtcttacatgaatcaaaaaaattaaatactagtacgtccttcttcaaagaaataggtta |
34928735 |
T |
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| Q |
122 |
tggaatttgccaaatgccacactgaggaagcaatatatatcatatcataatatttgcagtctgtagtaattcctctgtcatatggtcaccaacagctcaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34928734 |
tggaatttgccaaatgccacactgaggaagcaatatatatcatatcataatatttgcagtctgtagtaattcctctgtcatatggtcaccaacagctcaa |
34928635 |
T |
|
| Q |
222 |
tgtactgttttgaatgtaaataaatccagttggtagagttatatatgggttccacctatttctactttgaataggtgtccttctaatcaat |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
34928634 |
tgtactgttttgaatgtaaataaatccagttggtagagttatatatgggttccacctatttctactttgaataggtgt-cttctaatcaat |
34928545 |
T |
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