View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7644_high_17 (Length: 288)
Name: NF7644_high_17
Description: NF7644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7644_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 12941195 - 12941403
Alignment:
| Q |
50 |
aattgttgttccctacatcgagcaaagaatcaccaaaaacaaatgaagcttgaattttatatgatatgctaaatttgaaagagagcaataatgtaaaaat |
149 |
Q |
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| T |
12941195 |
aattgttgttccctacatcgagcaaagaatcaccaaaaacaaatgaagcttgaattttatatgatatgctaaatttgaaagagagcaataatgtaaaaat |
12941294 |
T |
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| Q |
150 |
cctaaacatattctcaaaaatgagttttgtgctcaaataataaagacccattggagagaaattttatgctaaaaaataggttcctcttgttttgtttggt |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
12941295 |
cctaaacatattctcaaaaatgagttttgtgctcaaataataaagactcattggagagaaattttatgctaaaaaataggttgctcttgttttgtttggt |
12941394 |
T |
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| Q |
250 |
ttctctgct |
258 |
Q |
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| T |
12941395 |
ttctctgct |
12941403 |
T |
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