View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7644_high_18 (Length: 287)
Name: NF7644_high_18
Description: NF7644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7644_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 3426779 - 3427049
Alignment:
| Q |
1 |
ctttattaacttgatattgttcatgttagttttgttgaaattttgagttattgtattatataagtatgtctcatatatattattttaatatgaaataaac |
100 |
Q |
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| T |
3426779 |
ctttattaacttgatattgttcatgttagttttgttgaaattttgagttattgtattatataagtatgtctcatatatattattttaatatgaaataaac |
3426878 |
T |
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| Q |
101 |
ttgtgagaatccataagtcgagtttacaagttga--tcacgtagac-aaatgagtttatttaaactctagaaattgacagcctaattttctgtagtagac |
197 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3426879 |
ttgtgagaatccataagtcgagtttacaagttgatttcacgtagacaaaatgagtttatttaaactctagaaattgacagcctaattttctgtagtagac |
3426978 |
T |
|
| Q |
198 |
accaaaacttatatcgcgtacattcaacattaataccttcttcctattacactatattacagattagtaag |
268 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
3426979 |
accaaaatttatatcgcgtacattcaacattaataccttcttcctattacactatattacaaattagtaag |
3427049 |
T |
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