View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7644_high_4 (Length: 451)
Name: NF7644_high_4
Description: NF7644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7644_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 404; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 1 - 432
Target Start/End: Complemental strand, 3426658 - 3426227
Alignment:
| Q |
1 |
ggtttcacttttgagtttactaaaattcgaattaacaactaagtcaaatcgaaattgatacctgaattgtattgaatctttaacctgtacaatttgctca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
3426658 |
ggtttcacttttgagtttactaaaattcgaattaacaactaagtcatattgaaagcgatacctaaattgtattgaatctttaacctgtacaatttgctca |
3426559 |
T |
|
| Q |
101 |
tgttatgcttattcttttgctcattattcatttacaacaacaatgtctttcttttgttctatgaagatgatcttcttttgacatgtattcaaagtgaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3426558 |
tgttatgcttattcttttgctcattattcatttacaacaacaatgtctttcttttgttctatgaagatgatcttcttttgacatgtattcaaagtgaatt |
3426459 |
T |
|
| Q |
201 |
cttaaagcagtaaatggaacaactctcaaataggttctcacttaaatatcttggctatcctcattaattcctgagaattgaactcattcccacaaaggag |
300 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3426458 |
cttaaagcagtaaatggaacaactgtcaaataggttctcacttaaatatcttggccatcctcattaattcctgagaattgaactcattcccacaaaggag |
3426359 |
T |
|
| Q |
301 |
ggtatccttttatctcaacatgattatattcaagaattgttggataaatttaatatgactaatgcaaagcctcctaccagactccattaaaactggtgta |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3426358 |
ggtatccttttatctcaacatgattatattcaagaattgttggataaatttaatatgactaatgcaaagcctcctaccagactccattaaaactggtgta |
3426259 |
T |
|
| Q |
401 |
gattcataacagttcagaagtcttattgtttc |
432 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3426258 |
gattcataacagttcagaagtcttattgtttc |
3426227 |
T |
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