View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7644_low_9 (Length: 403)

Name: NF7644_low_9
Description: NF7644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7644_low_9
NF7644_low_9
[»] chr4 (96 HSPs)
chr4 (20-393)||(18966471-18966844)
chr4 (278-378)||(38903776-38903875)
chr4 (271-378)||(47147490-47147595)
chr4 (302-389)||(37042711-37042798)
chr4 (23-92)||(43070056-43070125)
chr4 (300-380)||(26024906-26024986)
chr4 (300-379)||(934488-934567)
chr4 (300-365)||(21879224-21879290)
chr4 (270-360)||(45569085-45569175)
chr4 (300-389)||(40018236-40018325)
chr4 (24-92)||(20105763-20105831)
chr4 (293-365)||(42293336-42293408)
chr4 (254-365)||(7681981-7682092)
chr4 (286-393)||(8598984-8599091)
chr4 (298-365)||(20047579-20047646)
chr4 (254-329)||(48033185-48033260)
chr4 (289-347)||(10209171-10209229)
chr4 (264-386)||(44686621-44686742)
chr4 (288-378)||(49738608-49738698)
chr4 (26-91)||(2588905-2588970)
chr4 (301-378)||(6843762-6843839)
chr4 (23-92)||(12494671-12494740)
chr4 (116-177)||(23292926-23292987)
chr4 (23-92)||(23906593-23906662)
chr4 (23-92)||(31403312-31403381)
chr4 (23-92)||(31960106-31960175)
chr4 (23-92)||(43433839-43433908)
chr4 (300-389)||(47372797-47372886)
chr4 (285-366)||(54470338-54470419)
chr4 (23-92)||(56375211-56375280)
chr4 (254-365)||(25967334-25967443)
chr4 (288-348)||(28351693-28351753)
chr4 (306-378)||(42639078-42639150)
chr4 (23-99)||(49987349-49987425)
chr4 (260-348)||(50680846-50680934)
chr4 (25-92)||(1777307-1777374)
chr4 (305-360)||(7544599-7544654)
chr4 (308-371)||(26024984-26025047)
chr4 (118-176)||(30982808-30982866)
chr4 (289-347)||(31961355-31961413)
chr4 (311-389)||(32339716-32339794)
chr4 (23-73)||(33709840-33709890)
chr4 (272-326)||(49987526-49987580)
chr4 (23-92)||(436150-436219)
chr4 (300-365)||(21214657-21214722)
chr4 (300-389)||(30853489-30853578)
chr4 (23-92)||(33191140-33191209)
chr4 (289-330)||(37488226-37488267)
chr4 (278-359)||(43069895-43069976)
chr4 (23-92)||(50286892-50286961)
chr4 (129-177)||(11596297-11596345)
chr4 (33-89)||(17668406-17668462)
chr4 (312-380)||(25574982-25575050)
chr4 (32-92)||(25967559-25967619)
chr4 (270-346)||(26356735-26356811)
chr4 (32-84)||(41192764-41192816)
chr4 (270-386)||(44667296-44667411)
chr4 (302-378)||(51841256-51841332)
chr4 (270-337)||(8459134-8459201)
chr4 (127-178)||(24343582-24343633)
chr4 (27-62)||(27991737-27991772)
chr4 (116-179)||(34306742-34306805)
chr4 (25-92)||(48174385-48174452)
chr4 (278-357)||(55809069-55809148)
chr4 (278-376)||(2557732-2557830)
chr4 (300-378)||(20105576-20105654)
chr4 (287-345)||(20999133-20999191)
chr4 (34-92)||(25257871-25257929)
chr4 (46-92)||(27338686-27338732)
chr4 (24-70)||(30853338-30853384)
chr4 (289-347)||(31897517-31897575)
chr4 (327-389)||(40932971-40933033)
chr4 (289-347)||(46372159-46372217)
chr4 (25-78)||(4137004-4137057)
chr4 (128-177)||(18513175-18513224)
chr4 (309-378)||(22420775-22420843)
chr4 (300-365)||(29801525-29801590)
chr4 (291-328)||(42566376-42566413)
chr4 (287-348)||(45204927-45204988)
chr4 (25-90)||(45423542-45423607)
chr4 (43-80)||(45569316-45569353)
chr4 (25-70)||(51841505-51841550)
chr4 (23-92)||(53707715-53707784)
chr4 (116-176)||(3947702-3947762)
chr4 (271-327)||(13805374-13805430)
chr4 (129-177)||(17876237-17876285)
chr4 (26-90)||(21106908-21106972)
chr4 (253-325)||(21107091-21107163)
chr4 (300-348)||(31043218-31043266)
chr4 (181-225)||(33709915-33709959)
chr4 (24-92)||(34233325-34233393)
chr4 (24-84)||(35690226-35690286)
chr4 (314-378)||(41192221-41192285)
chr4 (326-378)||(48154905-48154957)
chr4 (36-92)||(51421666-51421722)
chr4 (22-62)||(54470127-54470167)
[»] chr8 (81 HSPs)
chr8 (254-371)||(38178325-38178442)
chr8 (270-359)||(16994521-16994610)
chr8 (254-348)||(4011183-4011277)
chr8 (287-365)||(23023358-23023436)
chr8 (278-380)||(28169516-28169618)
chr8 (288-380)||(10108947-10109039)
chr8 (257-357)||(35643685-35643785)
chr8 (300-356)||(39967579-39967635)
chr8 (270-361)||(10079982-10080073)
chr8 (287-378)||(38391951-38392042)
chr8 (23-92)||(39760716-39760785)
chr8 (300-380)||(3645232-3645312)
chr8 (24-92)||(16351312-16351380)
chr8 (25-89)||(42493599-42493663)
chr8 (254-377)||(30559793-30559916)
chr8 (27-90)||(30748384-30748447)
chr8 (254-377)||(30783101-30783224)
chr8 (23-90)||(39946778-39946845)
chr8 (27-92)||(12492134-12492199)
chr8 (254-327)||(32931061-32931134)
chr8 (23-92)||(36395242-36395311)
chr8 (305-373)||(44175262-44175331)
chr8 (301-357)||(79174-79230)
chr8 (254-374)||(16917283-16917403)
chr8 (118-177)||(8343387-8343446)
chr8 (25-92)||(10080197-10080264)
chr8 (44-91)||(11130244-11130291)
chr8 (286-345)||(16351510-16351569)
chr8 (287-365)||(5908779-5908857)
chr8 (303-357)||(24399868-24399922)
chr8 (290-360)||(24739924-24739994)
chr8 (34-92)||(32043522-32043580)
chr8 (133-178)||(13436909-13436954)
chr8 (27-92)||(16252860-16252925)
chr8 (287-364)||(16705880-16705957)
chr8 (116-177)||(21465481-21465542)
chr8 (287-380)||(23492168-23492260)
chr8 (270-347)||(32043706-32043783)
chr8 (116-177)||(36450694-36450755)
chr8 (23-92)||(36565533-36565602)
chr8 (289-357)||(16035806-16035874)
chr8 (254-378)||(29520750-29520873)
chr8 (24-92)||(30783332-30783400)
chr8 (36-92)||(44681331-44681387)
chr8 (270-326)||(45512605-45512661)
chr8 (25-92)||(7103185-7103252)
chr8 (25-92)||(29520583-29520650)
chr8 (290-348)||(39388918-39388977)
chr8 (254-348)||(2216388-2216481)
chr8 (131-177)||(4673354-4673400)
chr8 (23-57)||(30456538-30456572)
chr8 (256-378)||(35362708-35362830)
chr8 (270-365)||(37826407-37826498)
chr8 (278-348)||(43733331-43733401)
chr8 (300-361)||(2776337-2776398)
chr8 (300-329)||(3079711-3079740)
chr8 (116-173)||(5813650-5813707)
chr8 (128-177)||(8343037-8343086)
chr8 (278-379)||(9904939-9905040)
chr8 (124-173)||(12559044-12559093)
chr8 (116-177)||(22652045-22652106)
chr8 (116-177)||(29510233-29510294)
chr8 (300-389)||(30198313-30198402)
chr8 (116-177)||(34450961-34451022)
chr8 (312-365)||(39760505-39760558)
chr8 (23-60)||(39953588-39953625)
chr8 (33-85)||(2518690-2518742)
chr8 (271-327)||(5127379-5127435)
chr8 (289-393)||(7531687-7531791)
chr8 (42-90)||(11129873-11129921)
chr8 (300-356)||(16971834-16971890)
chr8 (287-347)||(17491743-17491803)
chr8 (289-349)||(18737225-18737284)
chr8 (289-349)||(18742110-18742169)
chr8 (289-349)||(18747074-18747133)
chr8 (117-165)||(22943301-22943349)
chr8 (25-89)||(28300407-28300471)
chr8 (254-326)||(29700376-29700448)
chr8 (247-347)||(35914690-35914790)
chr8 (32-92)||(36069573-36069633)
chr8 (116-176)||(43737752-43737812)
[»] chr7 (62 HSPs)
chr7 (270-357)||(24549767-24549854)
chr7 (278-380)||(45601600-45601702)
chr7 (116-177)||(9778563-9778624)
chr7 (255-348)||(28628021-28628114)
chr7 (283-363)||(29653619-29653699)
chr7 (24-92)||(40008709-40008777)
chr7 (287-377)||(12966149-12966239)
chr7 (23-92)||(33072875-33072944)
chr7 (23-92)||(37617865-37617934)
chr7 (256-336)||(30814771-30814851)
chr7 (21-92)||(34869339-34869410)
chr7 (307-393)||(19262501-19262587)
chr7 (116-177)||(5409771-5409832)
chr7 (23-92)||(14593682-14593751)
chr7 (288-357)||(30144909-30144978)
chr7 (23-92)||(30200251-30200320)
chr7 (23-92)||(35906493-35906562)
chr7 (23-92)||(36651915-36651984)
chr7 (254-347)||(38135302-38135395)
chr7 (27-92)||(39811882-39811947)
chr7 (300-348)||(1569162-1569210)
chr7 (23-103)||(24549968-24550048)
chr7 (289-380)||(9797762-9797853)
chr7 (33-92)||(27021998-27022057)
chr7 (301-348)||(30664715-30664762)
chr7 (302-365)||(32368408-32368471)
chr7 (270-389)||(40830318-40830436)
chr7 (287-377)||(21517439-21517529)
chr7 (290-348)||(41461235-41461293)
chr7 (306-364)||(41483639-41483697)
chr7 (311-365)||(41578194-41578248)
chr7 (23-92)||(5335843-5335912)
chr7 (23-92)||(13859300-13859369)
chr7 (23-92)||(16013205-16013274)
chr7 (116-177)||(21864866-21864927)
chr7 (116-177)||(25822724-25822785)
chr7 (300-365)||(28858191-28858256)
chr7 (23-92)||(31005144-31005213)
chr7 (23-92)||(36514497-36514566)
chr7 (306-378)||(30914560-30914632)
chr7 (24-92)||(39906662-39906730)
chr7 (305-365)||(40139019-40139079)
chr7 (305-373)||(43281982-43282050)
chr7 (118-177)||(598268-598327)
chr7 (271-378)||(22174117-22174224)
chr7 (118-177)||(43027404-43027463)
chr7 (23-89)||(11593881-11593947)
chr7 (116-178)||(24339711-24339773)
chr7 (119-177)||(29763129-29763187)
chr7 (24-90)||(38606927-38606993)
chr7 (27-89)||(43282330-43282392)
chr7 (270-323)||(14593876-14593929)
chr7 (120-177)||(24105740-24105797)
chr7 (307-363)||(9191928-9191984)
chr7 (116-172)||(13770754-13770810)
chr7 (287-323)||(16013416-16013452)
chr7 (116-176)||(20549849-20549909)
chr7 (122-178)||(21568560-21568616)
chr7 (311-351)||(28542029-28542069)
chr7 (31-99)||(45841265-45841333)
chr7 (24-92)||(47848596-47848664)
chr7 (254-318)||(47848774-47848838)
[»] chr2 (70 HSPs)
chr2 (247-379)||(26784397-26784529)
chr2 (289-389)||(8197588-8197689)
chr2 (289-389)||(8202348-8202449)
chr2 (287-389)||(37470180-37470282)
chr2 (254-378)||(33504323-33504448)
chr2 (254-395)||(37481658-37481799)
chr2 (33-93)||(23714549-23714609)
chr2 (33-93)||(24102221-24102281)
chr2 (287-377)||(33287554-33287644)
chr2 (287-377)||(43832231-43832321)
chr2 (270-374)||(19235046-19235150)
chr2 (256-348)||(38435054-38435146)
chr2 (292-363)||(1626333-1626404)
chr2 (311-378)||(31254445-31254512)
chr2 (303-378)||(42149718-42149793)
chr2 (254-380)||(9556425-9556551)
chr2 (303-365)||(41779181-41779243)
chr2 (23-92)||(4807513-4807582)
chr2 (295-348)||(11006848-11006901)
chr2 (271-360)||(12026081-12026170)
chr2 (24-92)||(19337140-19337209)
chr2 (278-347)||(26670892-26670961)
chr2 (116-177)||(30717459-30717520)
chr2 (116-177)||(38117099-38117160)
chr2 (32-92)||(9556660-9556720)
chr2 (304-348)||(19024328-19024372)
chr2 (24-92)||(38429806-38429874)
chr2 (23-89)||(3865993-3866059)
chr2 (116-178)||(26769580-26769642)
chr2 (264-346)||(45640615-45640697)
chr2 (24-85)||(9579000-9579061)
chr2 (303-360)||(18188901-18188958)
chr2 (23-92)||(36039144-36039213)
chr2 (23-84)||(36183372-36183433)
chr2 (27-92)||(38452981-38453046)
chr2 (116-177)||(42511322-42511383)
chr2 (24-81)||(45077670-45077727)
chr2 (24-92)||(23997539-23997607)
chr2 (289-365)||(42092652-42092728)
chr2 (302-389)||(2906040-2906127)
chr2 (23-62)||(9647927-9647966)
chr2 (300-347)||(23915782-23915829)
chr2 (116-178)||(11223792-11223853)
chr2 (116-178)||(24009353-24009415)
chr2 (287-337)||(29548736-29548786)
chr2 (127-177)||(37419823-37419873)
chr2 (289-347)||(42543370-42543428)
chr2 (306-360)||(44415782-44415836)
chr2 (289-347)||(44437810-44437868)
chr2 (23-92)||(2610449-2610518)
chr2 (23-92)||(3243943-3244012)
chr2 (27-92)||(4598856-4598921)
chr2 (23-84)||(7825279-7825340)
chr2 (24-89)||(21834475-21834540)
chr2 (148-177)||(30394526-30394555)
chr2 (116-177)||(35056937-35056998)
chr2 (300-349)||(37282237-37282286)
chr2 (304-345)||(38860328-38860369)
chr2 (254-327)||(43752056-43752129)
chr2 (256-380)||(6219069-6219191)
chr2 (181-225)||(7615288-7615332)
chr2 (303-363)||(8491268-8491328)
chr2 (302-378)||(9496014-9496090)
chr2 (278-378)||(12141668-12141768)
chr2 (116-172)||(12224281-12224337)
chr2 (25-69)||(14255500-14255544)
chr2 (278-378)||(19855586-19855686)
chr2 (116-176)||(27286222-27286282)
chr2 (119-175)||(36756275-36756331)
chr2 (24-92)||(38434873-38434941)
[»] chr6 (42 HSPs)
chr6 (271-378)||(34563-34670)
chr6 (254-378)||(8364656-8364780)
chr6 (32-92)||(9568590-9568650)
chr6 (270-347)||(10617323-10617400)
chr6 (23-92)||(33998296-33998365)
chr6 (24-92)||(35043733-35043801)
chr6 (278-365)||(1747712-1747799)
chr6 (287-360)||(1681597-1681670)
chr6 (23-92)||(28085297-28085366)
chr6 (24-92)||(10100149-10100217)
chr6 (300-348)||(31831947-31831995)
chr6 (254-341)||(579518-579605)
chr6 (33-84)||(5258450-5258501)
chr6 (116-177)||(7977770-7977831)
chr6 (116-177)||(16766766-16766827)
chr6 (24-92)||(9594004-9594072)
chr6 (21-85)||(10617525-10617588)
chr6 (254-378)||(33997602-33997726)
chr6 (116-175)||(12696387-12696446)
chr6 (303-378)||(35199681-35199755)
chr6 (287-348)||(43140-43202)
chr6 (291-337)||(7080477-7080523)
chr6 (24-62)||(7513305-7513343)
chr6 (127-177)||(9027236-9027286)
chr6 (278-348)||(9593796-9593866)
chr6 (116-154)||(10827507-10827545)
chr6 (286-348)||(31818663-31818725)
chr6 (116-178)||(34595192-34595254)
chr6 (254-335)||(4948405-4948486)
chr6 (254-335)||(4955376-4955457)
chr6 (23-92)||(5129129-5129198)
chr6 (116-177)||(8365448-8365509)
chr6 (116-177)||(10339054-10339115)
chr6 (116-177)||(17327590-17327651)
chr6 (116-177)||(28152156-28152217)
chr6 (116-177)||(33001229-33001290)
chr6 (291-347)||(38900-38956)
chr6 (119-179)||(3209460-3209520)
chr6 (24-92)||(5080777-5080845)
chr6 (23-63)||(6293690-6293730)
chr6 (117-177)||(7248428-7248488)
chr6 (287-327)||(9568825-9568865)
[»] chr1 (77 HSPs)
chr1 (254-389)||(38868982-38869117)
chr1 (283-380)||(40416500-40416597)
chr1 (270-378)||(853843-853951)
chr1 (283-378)||(8203192-8203287)
chr1 (255-378)||(8796310-8796433)
chr1 (271-389)||(15577535-15577653)
chr1 (254-375)||(42501208-42501329)
chr1 (297-389)||(30396776-30396868)
chr1 (276-347)||(19969301-19969372)
chr1 (278-348)||(30834065-30834135)
chr1 (27-92)||(40920829-40920894)
chr1 (24-92)||(4379927-4379995)
chr1 (270-378)||(6025721-6025829)
chr1 (311-375)||(10584958-10585022)
chr1 (300-360)||(12231511-12231571)
chr1 (287-347)||(28528488-28528548)
chr1 (116-175)||(1486646-1486705)
chr1 (115-178)||(5944351-5944414)
chr1 (253-344)||(32404618-32404709)
chr1 (270-357)||(43423835-43423922)
chr1 (270-348)||(8342969-8343047)
chr1 (255-377)||(33560917-33561039)
chr1 (23-92)||(1210666-1210735)
chr1 (116-177)||(6427533-6427594)
chr1 (300-389)||(7124287-7124376)
chr1 (23-92)||(9592655-9592724)
chr1 (23-92)||(30202422-30202491)
chr1 (116-177)||(37598889-37598950)
chr1 (23-92)||(43240673-43240742)
chr1 (24-92)||(8391694-8391762)
chr1 (116-176)||(21032275-21032335)
chr1 (25-92)||(4001747-4001814)
chr1 (295-378)||(16822078-16822161)
chr1 (21-92)||(32231246-32231317)
chr1 (287-362)||(46388509-46388584)
chr1 (287-362)||(46394953-46395028)
chr1 (287-345)||(3818947-3819005)
chr1 (287-389)||(17815612-17815714)
chr1 (254-348)||(29577230-29577324)
chr1 (278-336)||(48431506-48431564)
chr1 (27-89)||(52442799-52442861)
chr1 (23-92)||(8671841-8671910)
chr1 (116-177)||(25934685-25934746)
chr1 (23-64)||(26016358-26016399)
chr1 (116-177)||(41597410-41597471)
chr1 (32-92)||(4590816-4590876)
chr1 (117-177)||(40917819-40917879)
chr1 (25-89)||(49347688-49347752)
chr1 (118-177)||(9828115-9828174)
chr1 (118-177)||(17408762-17408821)
chr1 (118-177)||(18190048-18190107)
chr1 (308-387)||(43934379-43934458)
chr1 (303-365)||(6299464-6299526)
chr1 (278-348)||(41560353-41560423)
chr1 (270-348)||(44008695-44008773)
chr1 (278-348)||(52442616-52442686)
chr1 (311-380)||(4590588-4590657)
chr1 (302-347)||(8676954-8676999)
chr1 (27-84)||(16822319-16822376)
chr1 (116-177)||(18337387-18337448)
chr1 (116-177)||(31015095-31015156)
chr1 (116-177)||(31694639-31694700)
chr1 (116-177)||(32461393-32461454)
chr1 (254-327)||(36339912-36339985)
chr1 (116-177)||(47989566-47989627)
chr1 (300-348)||(990546-990594)
chr1 (126-178)||(1704934-1704986)
chr1 (287-347)||(7083023-7083083)
chr1 (304-376)||(10569131-10569203)
chr1 (308-348)||(12135861-12135901)
chr1 (33-89)||(16273115-16273171)
chr1 (128-184)||(17831455-17831511)
chr1 (133-177)||(30359440-30359484)
chr1 (116-172)||(40181929-40181984)
chr1 (181-225)||(43423710-43423754)
chr1 (287-347)||(50771645-50771705)
chr1 (270-322)||(51584860-51584912)
[»] chr5 (63 HSPs)
chr5 (254-380)||(12576916-12577042)
chr5 (254-339)||(6859481-6859566)
chr5 (254-326)||(15489602-15489674)
chr5 (270-365)||(18698910-18699005)
chr5 (287-365)||(27998574-27998652)
chr5 (23-92)||(2075766-2075835)
chr5 (23-92)||(9234990-9235059)
chr5 (23-92)||(10639218-10639287)
chr5 (32-92)||(5305546-5305606)
chr5 (23-70)||(27998344-27998391)
chr5 (305-360)||(28186851-28186906)
chr5 (254-348)||(7678578-7678672)
chr5 (254-360)||(9917526-9917632)
chr5 (23-92)||(1287881-1287950)
chr5 (254-347)||(2713044-2713137)
chr5 (23-92)||(28186960-28187029)
chr5 (254-346)||(6889093-6889185)
chr5 (24-92)||(7678402-7678470)
chr5 (271-378)||(9235166-9235271)
chr5 (24-92)||(16347670-16347738)
chr5 (24-92)||(32516480-32516548)
chr5 (270-357)||(14749423-14749510)
chr5 (116-175)||(21190998-21191057)
chr5 (287-378)||(38684613-38684704)
chr5 (305-364)||(43475390-43475449)
chr5 (270-324)||(3775179-3775233)
chr5 (27-89)||(6368220-6368282)
chr5 (287-357)||(30588580-30588650)
chr5 (124-178)||(32766871-32766925)
chr5 (23-92)||(1275186-1275255)
chr5 (116-177)||(14873580-14873641)
chr5 (25-90)||(21952274-21952339)
chr5 (23-92)||(24178431-24178500)
chr5 (116-176)||(6401567-6401627)
chr5 (300-348)||(14667917-14667965)
chr5 (287-347)||(33667568-33667628)
chr5 (118-178)||(42893420-42893480)
chr5 (254-357)||(7359339-7359442)
chr5 (288-347)||(10082834-10082893)
chr5 (311-362)||(28005692-28005743)
chr5 (118-177)||(39205945-39206004)
chr5 (270-357)||(42199509-42199596)
chr5 (287-349)||(11675662-11675724)
chr5 (289-347)||(15369886-15369944)
chr5 (287-337)||(29922417-29922467)
chr5 (305-375)||(37918183-37918253)
chr5 (287-348)||(28015-28076)
chr5 (23-92)||(11002713-11002782)
chr5 (129-178)||(19820327-19820376)
chr5 (116-177)||(21522819-21522880)
chr5 (116-177)||(21533385-21533446)
chr5 (116-177)||(21576685-21576746)
chr5 (270-335)||(24391089-24391154)
chr5 (145-178)||(36838618-36838651)
chr5 (311-348)||(39322154-39322191)
chr5 (270-347)||(42199402-42199479)
chr5 (26-63)||(43558135-43558172)
chr5 (285-325)||(3775276-3775316)
chr5 (116-176)||(21542099-21542159)
chr5 (278-326)||(28676719-28676767)
chr5 (32-92)||(34194788-34194848)
chr5 (125-177)||(35017110-35017162)
chr5 (129-177)||(38464313-38464361)
[»] chr3 (73 HSPs)
chr3 (288-365)||(43308696-43308773)
chr3 (300-365)||(46431750-46431815)
chr3 (258-356)||(29475792-29475888)
chr3 (264-378)||(37598228-37598341)
chr3 (304-378)||(49841766-49841840)
chr3 (254-378)||(23534628-23534752)
chr3 (305-389)||(55244429-55244513)
chr3 (286-345)||(11581576-11581635)
chr3 (291-346)||(36820067-36820122)
chr3 (300-378)||(2340775-2340853)
chr3 (34-92)||(36820251-36820309)
chr3 (278-348)||(39600769-39600839)
chr3 (118-179)||(11252036-11252097)
chr3 (287-360)||(40982029-40982102)
chr3 (23-92)||(51448001-51448070)
chr3 (23-92)||(52138721-52138790)
chr3 (24-92)||(2341006-2341074)
chr3 (287-391)||(34719125-34719229)
chr3 (127-178)||(11610578-11610629)
chr3 (270-357)||(21200664-21200751)
chr3 (25-92)||(37227853-37227920)
chr3 (287-362)||(44443278-44443353)
chr3 (287-377)||(46367446-46367537)
chr3 (110-176)||(15999951-16000017)
chr3 (23-89)||(45728067-45728133)
chr3 (22-88)||(47788815-47788881)
chr3 (116-177)||(7171559-7171620)
chr3 (116-177)||(14209182-14209243)
chr3 (270-327)||(31261051-31261108)
chr3 (256-389)||(37228184-37228317)
chr3 (23-92)||(46568037-46568106)
chr3 (23-92)||(54278941-54279010)
chr3 (116-177)||(55401133-55401194)
chr3 (287-347)||(40116557-40116617)
chr3 (300-348)||(41452828-41452876)
chr3 (271-342)||(44133938-44134007)
chr3 (32-92)||(45236786-45236846)
chr3 (300-348)||(45289179-45289227)
chr3 (303-389)||(21427631-21427715)
chr3 (118-177)||(27505311-27505370)
chr3 (272-347)||(27893207-27893282)
chr3 (25-92)||(47233888-47233955)
chr3 (127-177)||(2408590-2408640)
chr3 (117-175)||(4987222-4987280)
chr3 (287-365)||(8476083-8476161)
chr3 (302-348)||(19162675-19162721)
chr3 (117-175)||(28918062-28918120)
chr3 (308-378)||(47804721-47804791)
chr3 (25-91)||(49841534-49841600)
chr3 (278-348)||(50960725-50960795)
chr3 (116-177)||(15796223-15796284)
chr3 (256-357)||(20262410-20262511)
chr3 (117-178)||(20503524-20503585)
chr3 (270-347)||(26990329-26990406)
chr3 (24-81)||(29919226-29919283)
chr3 (24-81)||(29928585-29928642)
chr3 (24-81)||(29968379-29968436)
chr3 (24-81)||(29977739-29977796)
chr3 (300-345)||(33307260-33307305)
chr3 (254-347)||(33755431-33755524)
chr3 (128-177)||(34185052-34185101)
chr3 (311-348)||(36304123-36304160)
chr3 (288-389)||(37228062-37228163)
chr3 (270-347)||(37351523-37351600)
chr3 (116-177)||(41961579-41961640)
chr3 (32-93)||(46431962-46432023)
chr3 (23-64)||(47542032-47542073)
chr3 (27-92)||(53519511-53519576)
chr3 (23-92)||(54128299-54128368)
chr3 (302-378)||(42026594-42026670)
chr3 (293-345)||(48657419-48657471)
chr3 (300-348)||(49042082-49042130)
chr3 (278-326)||(54365085-54365133)
[»] scaffold0325 (1 HSPs)
scaffold0325 (257-360)||(11900-12002)
[»] scaffold0018 (2 HSPs)
scaffold0018 (288-347)||(178509-178568)
scaffold0018 (23-92)||(31389-31458)
[»] scaffold0380 (1 HSPs)
scaffold0380 (119-177)||(8662-8720)
[»] scaffold0373 (1 HSPs)
scaffold0373 (301-378)||(2359-2436)
[»] scaffold0036 (1 HSPs)
scaffold0036 (27-92)||(4564-4629)
[»] scaffold0019 (1 HSPs)
scaffold0019 (116-177)||(71794-71855)
[»] scaffold0361 (1 HSPs)
scaffold0361 (116-178)||(14585-14647)
[»] scaffold0053 (1 HSPs)
scaffold0053 (116-178)||(8856-8918)
[»] scaffold0003 (3 HSPs)
scaffold0003 (116-178)||(241663-241725)
scaffold0003 (127-177)||(236914-236964)
scaffold0003 (36-92)||(347252-347308)
[»] scaffold0512 (1 HSPs)
scaffold0512 (116-177)||(4976-5037)
[»] scaffold0123 (1 HSPs)
scaffold0123 (117-178)||(44453-44514)
[»] scaffold0652 (1 HSPs)
scaffold0652 (116-176)||(403-463)
[»] scaffold0491 (1 HSPs)
scaffold0491 (289-349)||(3915-3974)


Alignment Details
Target: chr4 (Bit Score: 330; Significance: 0; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 20 - 393
Target Start/End: Original strand, 18966471 - 18966844
Alignment:
Q  20 ggtagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagattgagagctataaagcacggatacgga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  18966471 ggtagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaaatggagagctataaagcaaggatacgga 18966570  T
Q  120 cacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatagacggagagacttgggttaacacctatcgtataaaagatggtg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  18966571 cacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatagacggagagacttgaggtaacacctatcgtataaaagatggtg 18966670  T
Q  220 gaaactcggattagaagacttattaatgtaggtaagatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactatta 319  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  18966671 gaaactcggattagaagacttattaatttaggtaagatggaggatagttcaatcactagaggtagaagaagacctaaaacaactataagagaaactatta 18966770  T
Q  320 agaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgattcat 393  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18966771 agaaagatctacagattagtgagctggattgagatatgatatatgacaaaacattatggcgccgtttgattcat 18966844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 278 - 378
Target Start/End: Complemental strand, 38903875 - 38903776
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| ||||||||| || ||||||||||||||||||||||||||| ||| |||||| |||||| ||| |||||||||||||||||| |||||||||    
T  38903875 gaggcagatgaagacctagaa-aactataagagaaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatgacataacattatg 38903777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 47147490 - 47147595
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaa 370  Q
    |||||| |||| ||| ||||||||| || |||||||  |||||||||||||||||||||| |||||| ||||||||||  ||||||||||||||| | ||    
T  47147490 atcactagaggcagaggaagacctagaaaaactatagaagaaactattaagaaagatctagagattaatgagttggat--agatatgatatatgatagaa 47147587  T
Q  371 cattatgg 378  Q
    ||||||||    
T  47147588 cattatgg 47147595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 37042798 - 37042711
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| || ||| | ||| ||| | |||||||||||| ||||||||    
T  37042798 ctataagagaaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgat 37042711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 43070125 - 43070056
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||  |||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  43070125 agagatgatcatgttgggttggatgtgtggtaagattagacaggataggattagaaatgacaacattaga 43070056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 380
Target Start/End: Complemental strand, 26024986 - 26024906
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||||| |||| ||| | ||||| | ||||||||||||    
T  26024986 aactatatgagaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtg 26024906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 300 - 379
Target Start/End: Complemental strand, 934567 - 934488
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggt 379  Q
    |||||| ||||||||||||||||||| |||| |||||| |||||||||| | | |||||||||||| | |||||||||||    
T  934567 aactattagagaaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaacattatggt 934488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 21879290 - 21879224
Alignment:
Q  300 aactataagagaaactatt-aagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||||||||||||| |||||||||||| |||| | |||||||||| ||||||||||||||||    
T  21879290 aactataagagaaactattcaagaaagatctagagatgaatgagttggatagagatatgatatatga 21879224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 45569175 - 45569085
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    ||||||| |||| ||| ||||||||| ||  | |||||||||||||||||||||| ||||| |||| | |||||||||| |||||||||||    
T  45569175 aatcactagaggcagaggaagacctagaaacattataagagaaactattaagaaaaatctagagatcaatgagttggatagagatatgata 45569085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 40018325 - 40018236
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||||||| ||||| |||||||||||||| |||| | |||||||||| | |||||||||||||| | ||||||| || | ||||||||    
T  40018325 aactataagaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaacattacggcgtcgtttgat 40018236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 20105831 - 20105763
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||| |||||||||||||||| ||||| | ||| ||||| ||||||||||||||||    
T  20105831 gagatgatgatgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacattaga 20105763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 42293408 - 42293336
Alignment:
Q  293 ctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||| ||||||||||||||||||||||||||||||| | |||| |||||| ||| || ||||| |||||||    
T  42293408 ctaaaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatagacatatggtatatga 42293336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 7682092 - 7681981
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||| ||||   |||||| |||| ||| ||||||||  || |||||||||||||||||| |||||| ||||| |||||| |||||| ||| || |    
T  7682092 agatggagggtagtcacatcactagaggcagaggaagacctggaaaaactataagagaaactatcaagaaaaatctatagattaatgagttagatagaaa 7681993  T
Q  354 tatgatatatga 365  Q
    |||| |||||||    
T  7681992 tatggtatatga 7681981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 8599091 - 8598984
Alignment:
Q  286 agaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtt 385  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |  ||| |||||| ||  || ||| | ||| ||| | |||||||||| | ||||    
T  8599091 agaagacctagaaaaactataagagaaactattaagaaagatctaaatgttaatgagttagaaagaaataaggtatttgatagaacattatggcgtcgtt 8598992  T
Q  386 tgattcat 393  Q
    ||||||||    
T  8598991 tgattcat 8598984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 365
Target Start/End: Original strand, 20047579 - 20047646
Alignment:
Q  298 acaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||||||||||||||||  |||||||| |||||| |||||||||| ||||||| | ||||||    
T  20047579 acaactataagagaaactattaaagaagatctagagattaatgagttggatagagatatcaaatatga 20047646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 48033185 - 48033260
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatct 329  Q
    |||| |||||||||| ||||||| |||| ||| |||||| ||| | ||||||||||||||||||||||||| ||||    
T  48033185 agattgaggatagttaaatcactagaggcagaggaagacttaagaaaactataagagaaactattaagaaatatct 48033260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 10209171 - 10209229
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || |||||||||||||||||||||||| |||||| |||||| |||||||||    
T  10209171 agacctagaaaaactataagagaaactattaagaaggatctagagattaatgagttgga 10209229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 386
Target Start/End: Complemental strand, 44686742 - 44686621
Alignment:
Q  264 tagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    ||||| ||||||| |||| ||||||||||||  || |||||||  ||||||||| |||||| ||||| ||||||  |||||||  | | |||||||||||    
T  44686742 tagttaaatcactagaggcagaagaagacctcgaaaaactatattagaaactatcaagaaaaatctagagattaacgagttgg-gtaaaatatgatatat 44686644  T
Q  364 gacaaaacattatggtgccgttt 386  Q
    || | |||||||||||| |||||    
T  44686643 gatagaacattatggtgtcgttt 44686621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 378
Target Start/End: Complemental strand, 49738698 - 49738608
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||| || |||||||| | ||||||||||||| |||||| | |||| |||||||||| | | || ||||||||||| ||||||||||    
T  49738698 aagacctagaaaaactataataaaaactattaagaaggatctagaaattaatgagttggatagggttaggatatatgacagaacattatgg 49738608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 2588905 - 2588970
Alignment:
Q  26 gatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattag 91  Q
    ||||| |||||||||||||||||||||||||| ||||    ||||||||| |||||||||||||||    
T  2588905 gatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacattag 2588970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Original strand, 6843762 - 6843839
Alignment:
Q  301 actataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| ||| || ||||| ||||| | | ||||||||||    
T  6843762 actataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatgg 6843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 12494671 - 12494740
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  12494671 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 12494740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 23292987 - 23292926
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| ||||| ||||||||||  ||||||||| |||||||||||    
T  23292987 cggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 23906662 - 23906593
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| |||| |||| ||||||| |||||||||  ||||||| |||||||    
T  23906662 agagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattaga 23906593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 31403381 - 31403312
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||| |||| ||||||||| |||||||||   ||||||||| ||||||||||||||||    
T  31403381 agagatgatgatgttgagttgaatgtgtggtgagattagacgggataggattagaaatgacaacattaga 31403312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 31960175 - 31960106
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  31960175 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 31960106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 43433839 - 43433908
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| |||| |||| ||||||| |||||||||  ||||||| |||||||    
T  43433839 agagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgacaccattaga 43433908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 47372797 - 47372886
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    ||||||||||||||||| ||| ||||||| | |||||| |||||||||| || ||||| ||||| | | |||||||||| | ||||||||    
T  47372797 aactataagagaaactactaataaagatccagagattaatgagttggatagaaatatggtatattatagaacattatggagtcgtttgat 47372886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 366
Target Start/End: Original strand, 54470338 - 54470419
Alignment:
Q  285 aagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgac 366  Q
    ||||||||| | || ||||||||||||| ||||||| |||| |||| |||||| |||||||||| || ||||| ||||||||    
T  54470338 aagaagaccaagaaaaactataagagaatctattaataaagttctagagattaatgagttggatagaaatatggtatatgac 54470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 56375211 - 56375280
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||| |||||  ||||||| |||||||    
T  56375211 agagatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattaga 56375280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 365
Target Start/End: Complemental strand, 25967443 - 25967334
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||| ||||||||| ||||||| |||  ||| |||||| |  || ||||||||||||||||||||| ||||||||| ||||||  || ||||||  |||    
T  25967443 agatgaaggatagttaaatcactagagacagaggaagactttgaataactataagagaaactattaaaaaagatctagagattaacgaattggat--aga 25967346  T
Q  354 tatgatatatga 365  Q
    ||| ||||||||    
T  25967345 tattatatatga 25967334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 28351693 - 28351753
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||| || |||||||||||||||||||| ||||||| || |||||| ||||||||||    
T  28351693 aagacctagaaaaactataagagaaactattacgaaagatttagagattattgagttggat 28351753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 42639150 - 42639078
Alignment:
Q  306 aagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||||||||||||||||  ||||| |||||||||| || ||||| ||| ||| | ||||||||||    
T  42639150 aagagaaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatgg 42639078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 49987349 - 49987425
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagattgagag 99  Q
    |||||||| ||||||| |||| |||| | |||||| ||||||  ||||||||| ||||||||||||||||| |||||    
T  49987349 agagatgaggatgttgtgttgaatgtttagtaagactagacatgataggattagaaatgacaacattagatagagag 49987425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 50680846 - 50680934
Alignment:
Q  260 aggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||  ||||||  ||| ||| | ||||||| || |||||||||||||| |||| ||||||||||| |||||| ||||||||||    
T  50680846 aggatagttagatcactataggcagaggtagacctagaaaaactataagagaaattatttagaaagatctagagattaatgagttggat 50680934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 1777374 - 1777307
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  1777374 agatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 1777307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 7544654 - 7544599
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||||||||||||||||||||||| |||||| |||||| ||| || ||||||||    
T  7544654 taagagaaactattaagaaagatctagagattaatgagtttgatcgaaatatgata 7544599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 371
Target Start/End: Complemental strand, 26025047 - 26024984
Alignment:
Q  308 gagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaac 371  Q
    ||||||||||||||||||||||| |||||| |||||||||| |||| ||| | ||||| |||||    
T  26025047 gagaaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgataaaac 26024984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 30982866 - 30982808
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||| |||||||||||||| ||||| |||||||||| || ||||||| ||||||||||    
T  30982866 gacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 31961413 - 31961355
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || |||||||||||||||||||| |||||||||| |||| | |||||||||    
T  31961413 agacctagaaaaactataagagaaactattaggaaagatctagagataaatgagttgga 31961355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 32339716 - 32339794
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||||||||||| | ||| ||||||  ||||||||| |||||||||||||||| | || ||||||| | ||||||||    
T  32339716 aaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaaaattatggcgtcgtttgat 32339794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 33709840 - 33709890
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggat 73  Q
    |||||||| |||||||||||||||||||||||||| ||||||  |||||||    
T  33709840 agagatgatgatgttgcgttggatgtgtggtaagactagacatgataggat 33709890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 326
Target Start/End: Original strand, 49987526 - 49987580
Alignment:
Q  272 tcactggagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    ||||| |||| ||| ||||||||| || |||||||||||||||||||||||||||    
T  49987526 tcactagaggcagaggaagacctagaaaaactataagagaaactattaagaaaga 49987580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 436150 - 436219
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| || |||||| ||||||  |||||||||  ||||||| |||||||    
T  436150 agagatgaggatgttgcgttggatgagtcgtaagactagacatgataggattaagaatgacaccattaga 436219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 21214722 - 21214657
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||||||||||||||||||| |||| ||| || |||||||||  || ||||||| |||||    
T  21214722 aactataagagaaactattaagaaaggtctatagagtaatgagttggagagaaatatgatgtatga 21214657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30853489 - 30853578
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||| || ||| ||||| ||| ||   ||||||||| || ||||||||    
T  30853489 aactataagagaaactattatgaaaaatctaaagattaatgagttgcatagaggtatgaaatacgattgaacattatgatgtcgtttgat 30853578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 33191209 - 33191140
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||||| |||||| |||||||||||||| |  |||||||||  ||||||| |||||||    
T  33191209 agagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccattaga 33191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 37488226 - 37488267
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatcta 330  Q
    ||||||| || |||||||||||||||||||||||||||||||    
T  37488226 agacctagaaaaactataagagaaactattaagaaagatcta 37488267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 43069976 - 43069895
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgat 359  Q
    |||| |||||||||| || || |||||| | |||||||||| ||||||||||| || ||| | |||||||| ||||||||||    
T  43069976 gaggcagaagaagacttacaaaaactatgaaagaaactattgagaaagatctagagtttaataagttggatagagatatgat 43069895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 50286892 - 50286961
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| || ||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  50286892 agagatgaggaagttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 50286961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  129 tgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||| ||||| ||||||||||| ||||||||| |||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 17668462 - 17668406
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    ||||||||||||||||||||||| | ||||  | ||| |||||||||||||||||||    
T  17668462 atgttgcgttggatgtgtggtaaaactagatgagataagattataaatgacaacatt 17668406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 380
Target Start/End: Original strand, 25574982 - 25575050
Alignment:
Q  312 aactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||| | ||||| | |||||| |||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtg 25575050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 25967619 - 25967559
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||| |||||||||||||||| ||||||   |||||||| ||||||| ||||||||    
T  25967619 gatgttgcgatggatgtgtggtaagactagacatggtaggattagaaatgactacattaga 25967559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 346
Target Start/End: Original strand, 26356735 - 26356811
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    ||||||| |||| ||  ||||||||| || |||||||||||||||| ||| ||| |||||| |||||| ||||||||    
T  26356735 aatcactagaggtaggggaagacctagaaaaactataagagaaactgttatgaaggatctagagattaatgagttgg 26356811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 41192764 - 41192816
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    ||||||||||||||||||||||| |||||||||  |||  |||||||||||||    
T  41192764 gatgttgcgttggatgtgtggtatgattagacaggatacaattataaatgaca 41192816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 386
Target Start/End: Complemental strand, 44667411 - 44667296
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaa 369  Q
    ||||||| |||| ||||||||||||  || |||||||  ||||||||| |||||| ||||| ||||||  |||||||  | | ||||||||||||| | |    
T  44667411 aatcactagaggcagaagaagacctcgaaaaactatattagaaactatcaagaaaaatctagagattaacgagttgg-gtaaaatatgatatatgataga 44667313  T
Q  370 acattatggtgccgttt 386  Q
    ||||| ||||| |||||    
T  44667312 acattttggtgtcgttt 44667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 51841332 - 51841256
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||||||||||||| ||| || | |||   ||||||||| | |||||||||||||| | ||||||||||    
T  51841332 ctataagagaaactattaagaaggatttagaaattcaagagttggatagggatatgatatatgatacaacattatgg 51841256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 8459201 - 8459134
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagatta 337  Q
    |||||||  ||| ||| |||||||||||| ||||| |||| |||||||||||||| ||||| ||||||    
T  8459201 aatcactaaaggcagaggaagacctaaaaaaactaaaagataaactattaagaaaaatctagagatta 8459134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 24343582 - 24343633
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||||||| ||||| ||||||| ||| ||||||||| ||||||||||||    
T  24343582 cgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcataga 24343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 62
Target Start/End: Complemental strand, 27991772 - 27991737
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattaga 62  Q
    |||||||||||| |||||||||||||||||||||||    
T  27991772 atgaagatgttgtgttggatgtgtggtaagattaga 27991737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 34306805 - 34306742
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatagac 179  Q
    ||||||| |||||||||||||| || || ||||||||||| |||| |||  |||||||||||||    
T  34306805 cggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatagac 34306742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 48174452 - 48174385
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| |||||||||||||||| ||||||||| ||||||  ||| |||||  ||||||| |||||||    
T  48174452 agatgaggatgttgcgttggatgagtggtaagactagacatgatatgattaggaatgacaccattaga 48174385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 55809148 - 55809069
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    |||| ||| ||||||||| || |||||||||||||||| ||| ||||||| || || ||| ||||||||||  |||||||    
T  55809148 gaggtagaggaagacctagaaaaactataagagaaactgttaggaaagatttagaggttaatgagttggatccagatatg 55809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 376
Target Start/End: Complemental strand, 2557830 - 2557732
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattat 376  Q
    |||| ||| ||||| ||| || |||| ||||||||||||||||||| |||||  ||||||  ||||||||| || ||||| | ||||| | ||||||||    
T  2557830 gaggtagaggaagatctagaaaaactgtaagagaaactattaagaaggatctgaagattaacgagttggatcgaaatatggtttatgatagaacattat 2557732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 378
Target Start/End: Complemental strand, 20105654 - 20105576
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||| |||||| | ||||||||||||| |||||  ||||||||| ||| ||||| ||||||| |  |||||||||    
T  20105654 aactataaaagaaacgactaagaaagatctagagattgatgagttggactgaaatatggtatatgataggacattatgg 20105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 20999133 - 20999191
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    ||||||||| || |||||||| | |||||||||||||||||||| || ||| |||||||    
T  20999133 gaagacctagaaaaactataatataaactattaagaaagatctagagtttaatgagttg 20999191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 25257929 - 25257871
Alignment:
Q  34 tgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||| ||||||||||| |||||| ||||||  |||| |||| ||||||||||||||||    
T  25257929 tgttgtgttggatgtgtagtaagactagacatgatagaattagaaatgacaacattaga 25257871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 27338732 - 27338686
Alignment:
Q  46 tgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| ||||| || |||||||| ||||||||||||||||||||||    
T  27338732 tgtgtgataagactaaacaaaatatgattataaatgacaacattaga 27338686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 30853338 - 30853384
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaatag 70  Q
    ||||||||||||||| ||||||||| |||||||| ||||||| ||||    
T  30853338 gagatgaagatgttgtgttggatgtatggtaagactagacaagatag 30853384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 31897575 - 31897517
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || |||||||||||||||||||| ||| |||||| |||| | |||||||||    
T  31897575 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 31897517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 40933033 - 40932971
Alignment:
Q  327 tctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||| |||||| |||||||||| | |||||||||||||| | |||||||||| | ||||||||    
T  40933033 tctagagattaatgagttggatagggatatgatatatgatagaacattatggcggcgtttgat 40932971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 46372159 - 46372217
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || |||||||||||||||||||| ||| |||||| |||| | |||||||||    
T  46372159 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 46372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 4137057 - 4137004
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataa 78  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||||| ||| ||||    
T  4137057 agatgaggattttgtgttggatgtgtggtaagactagacaaaatatgatcataa 4137004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 18513224 - 18513175
Alignment:
Q  128 gtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||| | ||| ||||||||||| ||||||||| |||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 378
Target Start/End: Complemental strand, 22420843 - 22420775
Alignment:
Q  309 agaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||| |||||||||||| |||||| |||||||||| |||||||| || |||| | | ||||||||    
T  22420843 agaaactat-aagaaagatctagagattaatgagttggatagagatatggtaaatgatagagcattatgg 22420775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 29801525 - 29801590
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||||||  ||||||| || ||||| | |||| |||| |||||||| |||||||||||||    
T  29801525 aactataagagaatttattaaggaaaatctataaattaatgagctggattgaaatatgatatatga 29801590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Original strand, 42566376 - 42566413
Alignment:
Q  291 acctaaaacaactataagagaaactattaagaaagatc 328  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  42566376 acctaaaaaaactacaagagaaactattaagaaagatc 42566413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 45204988 - 45204927
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||| || |||||||||||||||||||| ||||||| || || ||| | ||||||||    
T  45204988 gaagacctagaaaaactataagagaaactattaggaaagatttagagtttaataagttggat 45204927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 45423542 - 45423607
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    |||||| ||||||| ||||| |||||||||||| |||||   |||| |||| ||||||||||||||    
T  45423542 agatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaacatta 45423607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 45569353 - 45569316
Alignment:
Q  43 ggatgtgtggtaagattagacaaaataggattataaat 80  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  45569353 ggatgtgtggtaagactagacaaaatagtattataaat 45569316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 51841550 - 51841505
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaatag 70  Q
    |||| ||||||||| |||||||||||||||||| ||||||| ||||    
T  51841550 agataaagatgttgtgttggatgtgtggtaagactagacaagatag 51841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 53707715 - 53707784
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| || |||||| ||||||  |||||| ||  ||||||| |||||||    
T  53707715 agagatgaggatgttgcgttggatgagtagtaagactagacatgataggactaggaatgacaccattaga 53707784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 3947762 - 3947702
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| |||||||||||||| | ||| || |||||||  ||||||||| ||||||||||    
T  3947762 cggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 13805430 - 13805374
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    |||||| |||| ||| ||| ||||| || |||||||||||||||||| |||||||||    
T  13805430 atcactagaggcagaggaaaacctagaaaaactataagagaaactatgaagaaagat 13805374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  129 tgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||| | ||| || ||||||| ||||||||||||||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 21106908 - 21106972
Alignment:
Q  26 gatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    ||||| ||||||| ||| |||||||||||||| |||||   |||| |||| ||||||||||||||    
T  21106908 gatgaggatgttgggttcgatgtgtggtaagactagacgtgatagaattagaaatgacaacatta 21106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 21107091 - 21107163
Alignment:
Q  253 aagatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaag 325  Q
    |||||||||| ||||   ||||||||| | ||  ||||||||| || |||||||||||||||||||| |||||    
T  21107091 aagatggagggtagtcagatcactggatgcagcggaagacctagaaaaactataagagaaactattaggaaag 21107163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 31043218 - 31043266
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||| |||||||||||||| ||||||| || |||||| ||||||||||    
T  31043218 aactaaaagagaaactattaggaaagatttagagattaatgagttggat 31043266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 33709915 - 33709959
Alignment:
Q  181 gagagacttgggttaacacctatcgtataaaagatggtggaaact 225  Q
    |||||| ||||| |||||||||| ||| |||||||||||||||||    
T  33709915 gagagagttggggtaacacctatagtagaaaagatggtggaaact 33709959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 34233393 - 34233325
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||| |||||||||||| ||||| ||||    ||||||||| ||| ||||||||||||    
T  34233393 gagatgatgatgttgtgttggatgtgtgataagactagatgtgataggattagaaacgacaacattaga 34233325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 35690226 - 35690286
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    ||||||| |||||||||||||||| || |||||| ||||| | |||||||||  |||||||    
T  35690226 gagatgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgaca 35690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 41192221 - 41192285
Alignment:
Q  314 ctattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||| |||||||||||| |||||| |||||||||| || ||||| ||||||  | ||||||||||    
T  41192221 ctataaagaaagatctagagattaatgagttggatagaaatatggtatatggtagaacattatgg 41192285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 48154957 - 48154905
Alignment:
Q  326 atctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||| |||||| |||||||||| || | ||||||||||||| ||||||||||    
T  48154957 atctagagattaatgagttggatagaaacatgatatatgacagaacattatgg 48154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 51421666 - 51421722
Alignment:
Q  36 ttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||| || |||||| ||||| | |||||||||| ||||||| |||||||    
T  51421666 ttgcgttggatgagtagtaagactagacgagataggattatgaatgacaccattaga 51421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 54470127 - 54470167
Alignment:
Q  22 tagagatgaagatgttgcgttggatgtgtggtaagattaga 62  Q
    ||||||||| |||||||| ||||||||||||||||| ||||    
T  54470127 tagagatgaggatgttgcattggatgtgtggtaagactaga 54470167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 371
Target Start/End: Complemental strand, 38178442 - 38178325
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||  |||| || |||| ||| ||||||||| || ||||||||||||||||||||| ||||| ||| | |||| |||||||||| ||||    
T  38178442 agatggaggatagtcaaatcgctagaggtagaggaagacctagaaaaactataagagaaactattaacaaagacctagacattaatgagttggatagaga 38178343  T
Q  354 tatgatatatgacaaaac 371  Q
    ||||||||||||||||||    
T  38178342 tatgatatatgacaaaac 38178325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 16994610 - 16994521
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgat 359  Q
    |||||||||||| ||| ||||||||| || ||||||| |||||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  16994610 aatcactggaggaagaggaagacctagaaaaactatatgagaaactattaagaatgatttagagattattgagttggattgagatatgat 16994521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 4011183 - 4011277
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||| || ||||| |||| || |||  ||| ||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4011183 agatggtgggtagttaaatcgctagagacagaggaagacctagaaaaactataagagaaactattaagaaagatctaaagattaatgagttggat 4011277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 23023358 - 23023436
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||| |  | |||||||||||    
T  23023358 gaagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttggataggaacatgatatatga 23023436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 380
Target Start/End: Original strand, 28169516 - 28169618
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| |||||||||||| |||||||||||||||||||| ||||||| |  |||||| ||||||||||| | ||||| | ||||| |||| ||||||    
T  28169516 gaggtagaggaagacctaaaaaaactataagagaaactattaggaaagattttgagattaatgagttggattcaaatatggtttatgataaaatattatg 28169615  T
Q  378 gtg 380  Q
    |||    
T  28169616 gtg 28169618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 380
Target Start/End: Original strand, 10108947 - 10109039
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    |||||||| || ||| ||||||||||||| ||||||||||||| ||||||  ||||| ||| |||||||| ||||||| | ||||||||||||    
T  10108947 aagacctagaaaaaccataagagaaactaataagaaagatctagagattaacgagtttgatagagatatgttatatgatagaacattatggtg 10109039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 357
Target Start/End: Complemental strand, 35643785 - 35643685
Alignment:
Q  257 tggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatat 356  Q
    |||||||||||   || ||| |||| ||| ||||||||| || |||||||||||||| |||||||||||||||| |||||| |||||||||| || ||||    
T  35643785 tggaggatagtcagattactagaggcagaggaagacctagaaaaactataagagaaattattaagaaagatctagagattaatgagttggatcgaaatat 35643686  T
Q  357 g 357  Q
    |    
T  35643685 g 35643685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 39967635 - 39967579
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatat 356  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  39967635 aactataagagaaactattaagaaagatctagcgattaatgagttggattgagatat 39967579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 361
Target Start/End: Complemental strand, 10080073 - 10079982
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatat 361  Q
    ||||||| |||| ||| ||||||||| |  |||||||||| ||||| |||||||||||||| |||||| |||||||||| || |||||||||    
T  10080073 aatcactagaggtagaggaagacctagagaaactataagaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatat 10079982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 38392042 - 38391951
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||| || ||||||| ||||||| |||||||||||||||||||||| ||||| |||| || ||||| ||||||| | || |||||||    
T  38392042 gaagacctagaaaaactatatgagaaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatgg 38391951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 39760785 - 39760716
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||| ||||||||||||||| |||||||||| |||||| || |||||| |||||||||    
T  39760785 agagatgaggatgttgtgttggatgtgtggtaggattagacaagataggagtagaaatgataacattaga 39760716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 380
Target Start/End: Original strand, 3645232 - 3645312
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    |||||||||||||||| |||||||||| ||| |||||| ||||| |||| |||||||||||| ||| | || |||||||||    
T  3645232 aactataagagaaactgttaagaaagacctagagattaatgagtaggatggagatatgatatgtgatagaatattatggtg 3645312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 16351312 - 16351380
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||||||||||||| |||||||||| |||||  |||||  ||| ||||||||||||||||    
T  16351312 gagatgaagatgttgcgttggatatgtggtaagactagacggaatagagttagaaatgacaacattaga 16351380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 42493663 - 42493599
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||| ||||||||||||||    
T  42493663 agatgaggatgttgcgttggttgtgtggtaagattagtcaagattggattgtaaatgacaacatt 42493599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 377
Target Start/End: Original strand, 30559793 - 30559916
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||   |||||| |||  ||| |||||| ||||| |||||||||||||||||| | ||||||| || |||||| ||||||||||  | |    
T  30559793 agatggaggatagtcggatcactagagatagatgaagacttaaaaaaactataagagaaactatcaggaaagatttagagattaatgagttggatccata 30559892  T
Q  354 tatgatatatgacaaaacattatg 377  Q
    |||| | ||||| | |||||||||    
T  30559893 tatggtttatgatagaacattatg 30559916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 30748384 - 30748447
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    |||| |||||| ||||||||||||||| ||||||||||  ||||||||| ||||||||||||||    
T  30748384 atgaggatgtttcgttggatgtgtggttagattagacatgataggattagaaatgacaacatta 30748447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 377
Target Start/End: Complemental strand, 30783224 - 30783101
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||   |||||| |||| ||| ||||| |||  | ||| ||||||||||||||| ||||||||||| |||||| |||||||||| || |    
T  30783224 agatggaggatagtcagatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggatcgaaa 30783125  T
Q  354 tatgatatatgacaaaacattatg 377  Q
    || | | ||| | |||||||||||    
T  30783124 tacggtttataataaaacattatg 30783101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 39946778 - 39946845
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||| ||||||| |||||    
T  39946778 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccatta 39946845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 12492199 - 12492134
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||||||||||||||| ||||||||| ||||||  |||||||||| ||||||| |||||||    
T  12492199 atgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacaccattaga 12492134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 32931061 - 32931134
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    ||||||||||||||   |||||| |||| ||| |||||||||||| |||||| ||||||||||||| |||||||    
T  32931061 agatggaggatagtcatatcactagaggcagaggaagacctaaaaaaactatcagagaaactattaggaaagat 32931134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 36395311 - 36395242
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  36395311 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 36395242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 44175262 - 44175331
Alignment:
Q  305 taagagaaactatt-aagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacat 373  Q
    |||||||||||||| |||||||||||| |||||  |||||||| | |||||||||||||||| |||||||    
T  44175262 taagagaaactatttaagaaagatctagagattgatgagttgggtagagatatgatatatgataaaacat 44175331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 79174 - 79230
Alignment:
Q  301 actataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||||| || |||||    
T  79174 actataagagaaactattaagaaagatctagagattaatgagctggatagaaatatg 79230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 16917283 - 16917403
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    |||| |||||||||  |||||||  ||| ||||||||||||| || | ||||| | |||||||| ||| ||||| || |||||| |||||||||| || |    
T  16917283 agattgaggatagtcaaatcactacaggtagaagaagacctagaaaagctataggtgaaactatcaaggaagatttagagattaatgagttggatagaaa 16917382  T
Q  354 tatgatatatgacaaaacatt 374  Q
    |||| ||||||| | ||||||    
T  16917383 tatggtatatgatagaacatt 16917403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 8343387 - 8343446
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| ||||| ||||||||||  | |||||||||||||||||||    
T  8343387 gacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 10080264 - 10080197
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| ||||||||||||| ||| |||||||| ||||| | ||| ||||| ||||||||||||||||    
T  10080264 agatgatgatgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattaga 10080197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 11130291 - 11130244
Alignment:
Q  44 gatgtgtggtaagattagacaaaataggattataaatgacaacattag 91  Q
    ||||||||||||||||||||| |||| ||||| |||||||||||||||    
T  11130291 gatgtgtggtaagattagacagaataagattagaaatgacaacattag 11130244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 16351510 - 16351569
Alignment:
Q  286 agaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    |||||||||| || |||||| ||||||||||||||||| |||||| |||||| |||||||    
T  16351510 agaagacctagaaaaactattagagaaactattaagaaggatctagagattaatgagttg 16351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 5908779 - 5908857
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||| || ||||||||||||||||||||| ||||||| |  ||||| ||||||||||  | ||||||| |||||    
T  5908779 gaagacctagaaaaactataagagaaactattaaaaaagatccaaggattaatgagttggatcaaaatatgatttatga 5908857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 24399922 - 24399868
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||||||||||||||||| |||||  |||||| ||||||||||||| |||||    
T  24399922 tataagagaaactattaagaaggatctcgagattaatgagttggattgaaatatg 24399868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 360
Target Start/End: Complemental strand, 24739994 - 24739924
Alignment:
Q  290 gacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||| || || |||||||||||||||| |||||||| || |||||| | |||||||| |||||||||||    
T  24739994 gacctagaaaaattataagagaaactattgagaaagatgtagagattaatcagttggatagagatatgata 24739924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 32043522 - 32043580
Alignment:
Q  34 tgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||||||||| |||||   |||| |||| ||||||||||||||||    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattaga 32043580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 13436954 - 13436909
Alignment:
Q  133 cgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcataga 13436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 16252860 - 16252925
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| ||||||| |||||||||||||||||||||||  | |||  |||| ||||||||||||||||    
T  16252860 atgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacattaga 16252925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 16705880 - 16705957
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatg 364  Q
    ||||||||||||  | | |||||||||||||||||||| | ||| |||||| |||||||||| || ||||| ||||||    
T  16705880 gaagacctaaaaatattgtaagagaaactattaagaaaaagctagagattaatgagttggatcgaaatatggtatatg 16705957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 21465481 - 21465542
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||| |||  |||||||||||||| | ||||||||| |||||||||||    
T  21465481 cggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 380
Target Start/End: Original strand, 23492168 - 23492260
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||||| || |||||| |||||||||| | |||||||| ||  ||||| |||||||||| || ||||||||||||| | |||| |||||||    
T  23492168 gaagacctagaa-aactattagagaaactactcagaaagatgtagcgattaatgagttggatagaaatatgatatatgatagaacactatggtg 23492260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 32043706 - 32043783
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| |||| ||  |||||||||||| |||||| ||||||||||| ||||| |||||| |||| | |||||||||    
T  32043706 aatcactagaggtaggggaagacctaaaaaaactattagagaaactatcaagaaggatctaaagatcaatgagttgga 32043783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 36450755 - 36450694
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| || ||||||||||| | ||| ||||||||||  |||||||||||||||||||||    
T  36450755 cggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 36565602 - 36565533
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  36565602 agagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 36565533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 16035874 - 16035806
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||||||  ||||||||||||||| |||||||| ||||| |||||| | |||||||| || |||||    
T  16035874 agacctaaaaagactataagagaaactgttaagaaatatctagagattacttagttggatcgaaatatg 16035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 29520750 - 29520873
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||  ||||||  |||| ||| |||| |||| || |||||||||||||||| ||| ||| ||| || |||||| ||||||||||  | |    
T  29520750 agatggaggatagtcaaatcacaagaggtagaggaag-cctagaaaaactataagagaaactgttaggaacgatttagagattaatgagttggatccaaa 29520848  T
Q  354 tatgatatatgacaaaacattatgg 378  Q
    |||| | ||||| | ||||||||||    
T  29520849 tatggtttatgatagaacattatgg 29520873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 30783400 - 30783332
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||| ||||||||||| ||||| |||| |||| |  ||||||||| ||||||||||||||||    
T  30783400 gagatgaggatcttgcgttggatctgtggcaagactagataggataggattagaaatgacaacattaga 30783332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 44681387 - 44681331
Alignment:
Q  36 ttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| ||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||    
T  44681387 ttgcattggatgtgtggtaagactagacgagataagattagaaatgacaacattaga 44681331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 326
Target Start/End: Complemental strand, 45512661 - 45512605
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    ||||||| |||| ||| ||||||||| || |||||||||||||||||||| ||||||    
T  45512661 aatcactagaggcagaggaagacctagaaaaactataagagaaactattaggaaaga 45512605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 7103185 - 7103252
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||  ||||||||||  |||| | ||||  | ||||||||||||||||||||||||||    
T  7103185 agatgaagatgttttgttggatgtgctgtaaaactagatgagataggattataaatgacaacattaga 7103252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 29520583 - 29520650
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| |||||||||||||||||||||||||| ||||    ||||||||| |||||| | |||||||    
T  29520583 agatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccattaga 29520650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 39388918 - 39388977
Alignment:
Q  290 gacctaaaacaactataa-gagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||| || |||||||| |||||||||||| |||||||||| |||||| ||||||||||    
T  39388918 gacctagaaaaactataaagagaaactattaggaaagatctagagattaatgagttggat 39388977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 2216388 - 2216481
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||||   |||||| |||| ||| ||||||||| || ||  |||||||||||||||||| ||||| || |||| | ||||||||||    
T  2216388 agatggaggatagtcagatcactagaggtagaggaagacctagaaaaaacataagagaaactattaag-aagatttagagatcaatgagttggat 2216481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 4673400 - 4673354
Alignment:
Q  131 tccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||| | |||||||||| ||||||||||||||||||||||    
T  4673400 tccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 30456572 - 30456538
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaaga 57  Q
    |||||||| ||||||||||||||||||||||||||    
T  30456572 agagatgaggatgttgcgttggatgtgtggtaaga 30456538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 378
Target Start/End: Complemental strand, 35362830 - 35362708
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagata 355  Q
    ||||||||||||  |||| ||  ||| ||| ||||||||| || ||||||  |||||||||||| ||||||| |  | |||| ||||||||| ||| |||    
T  35362830 atggaggatagtcaaatccctataggcagaggaagacctagaaaaactatcggagaaactattaggaaagatttggaaattaatgagttggactgaaata 35362731  T
Q  356 tgatatatgacaaaacattatgg 378  Q
    || | ||||| | ||||||||||    
T  35362730 tggtgtatgatagaacattatgg 35362708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 37826407 - 37826498
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||| |||| ||| | ||||||| |  |||||||||||||||||||    |||||||| ||||||| ||||||||| || ||||| |||||||    
T  37826407 aatcactagaggcagagggagacctagataaactataagagaaactatt----aagatctagagattagcgagttggatagaaatatggtatatga 37826498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 43733331 - 43733401
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| ||| ||||||||| || ||||| ||||||||||||  |||| |||||| |||||| ||||||||||    
T  43733331 gaggtagaggaagacctagaaaaactacaagagaaactatcgagaaggatctagagattaatgagttggat 43733401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 2776398 - 2776337
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatat 361  Q
    |||||||||| |||| |||||||| |||||| | |||| ||| |||||| ||||||||||||    
T  2776398 aactataagaaaaacgattaagaacgatctagatattaatgatttggatagagatatgatat 2776337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 329
Target Start/End: Complemental strand, 3079740 - 3079711
Alignment:
Q  300 aactataagagaaactattaagaaagatct 329  Q
    ||||||||||||||||||||||||||||||    
T  3079740 aactataagagaaactattaagaaagatct 3079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 173
Target Start/End: Original strand, 5813650 - 5813707
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttc 173  Q
    ||||||| |||||||||||||| ||||| |||||||||   ||||||||| |||||||    
T  5813650 cggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 8343037 - 8343086
Alignment:
Q  128 gtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||| ||||| ||||||||||  | |||||||||||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 379
Target Start/End: Complemental strand, 9905040 - 9904939
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| ||||||||| || ||||| ||||||||||||||| |||||| || | |||| ||| ||||||  | ||| | | ||||| |||||||||||    
T  9905040 gaggtagatgaagacctagaaaaactacaagagaaactattaataaagatttagaaattaatgatttggatcaaaataaggtttatgataaaacattatg 9904941  T
Q  378 gt 379  Q
    ||    
T  9904940 gt 9904939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 12559093 - 12559044
Alignment:
Q  124 acacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttc 173  Q
    |||||||||||||||||||| ||  ||||||  |||||||||||||||||    
T  12559093 acacgtgtccgacaacgggacacatctaatcccaggagtgtctgtgcttc 12559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 22652045 - 22652106
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||  ||||||||| |||||||||||    
T  22652045 cggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 29510294 - 29510233
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| || ||||||||||| ||||| || |||||||  ||||||||| |||||||||||    
T  29510294 cggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 30198402 - 30198313
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||||||||||| ||||||||||||| |  |||||| |||||||||| |  ||||| | ||||| | || |||||||||  |||||||    
T  30198402 aactataagagaaattattaagaaagatattgagattaatgagttggatcggaatatggtttatgatagaatattatggtgtagtttgat 30198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 34451022 - 34450961
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| |||||||||| |||||||||||    
T  34451022 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Complemental strand, 39760558 - 39760505
Alignment:
Q  312 aactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||||||  |||| |||||| | |||||||| ||||||||||||||||    
T  39760558 aactattaagaaaactctagagattaataagttggatagagatatgatatatga 39760505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 39953625 - 39953588
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagatta 60  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  39953625 agagatgagaatgttgcgttggatgtgtggtaagatta 39953588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 2518742 - 2518690
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaa 85  Q
    ||||||| ||||||||||||||||| ||||  | ||||||||| |||||||||    
T  2518742 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 2518690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 5127435 - 5127379
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    |||||| |||| ||| | || |||| || ||||||||||||||||||||||||||||    
T  5127435 atcactagaggcagaggtaggcctagaaaaactataagagaaactattaagaaagat 5127379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 7531791 - 7531687
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttga 388  Q
    ||||||| || ||||||| |||||||||||| ||| |||||| |||| | |||||||||   ||| ||| | | ||| | |||| ||||||| |||||||    
T  7531791 agacctagaaaaactatacgagaaactattaggaaggatctagagataaatgagttggagaaagacatggtttttgatagaacactatggtgtcgtttga 7531692  T
Q  389 ttcat 393  Q
    |||||    
T  7531691 ttcat 7531687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 11129921 - 11129873
Alignment:
Q  42 tggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    ||||||||||||||||||||||| |||| ||||| ||| || |||||||    
T  11129921 tggatgtgtggtaagattagacataataagattagaaacgataacatta 11129873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 16971890 - 16971834
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatat 356  Q
    ||||||||||||||| |||||||| ||| || |||||| ||||||||| ||| ||||    
T  16971890 aactataagagaaacgattaagaaggatataaagattaatgagttggactgaaatat 16971834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 17491803 - 17491743
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||| || |||| ||||||||||||||||||||||  |  |||||| |||||||||    
T  17491803 gaagacctagaaaaactgtaagagaaactattaagaaagacttggagattaatgagttgga 17491743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 18737284 - 18737225
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    |||||||||| ||||||||||||||||||| ||||| |||   |||||| |||||||||||    
T  18737284 agacctaaaa-aactataagagaaactatttagaaaaatcattagattaatgagttggatt 18737225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 18742169 - 18742110
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    |||||||||| ||||||||||||||||||| ||||| |||   |||||| |||||||||||    
T  18742169 agacctaaaa-aactataagagaaactatttagaaaaatcattagattaatgagttggatt 18742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 18747133 - 18747074
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    |||||||||| ||||||||||||||||||| ||||| |||   |||||| |||||||||||    
T  18747133 agacctaaaa-aactataagagaaactatttagaaaaatcattagattaatgagttggatt 18747074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtc 165  Q
    |||||| |||||||||||||| ||||| ||||||||||  |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 28300471 - 28300407
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||| ||||||| ||||||||||| |||||| ||||  | ||| ||||| |||||||||||||    
T  28300471 agatgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaatgacaacatt 28300407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 29700376 - 29700448
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    ||||||||||||||   |||||| |||| ||| ||||||||| || ||||| ||||||||||| || ||||||    
T  29700376 agatggaggatagtcatatcactagaggtagaggaagacctagaaaaactaaaagagaaactaataggaaaga 29700448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 347
Target Start/End: Complemental strand, 35914790 - 35914690
Alignment:
Q  247 gtaggtaagatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    |||||| ||||||||||||||   ||| || |||  ||| |||||| || || |||||||||||||||||||| ||||||  |  |||||| ||||||||    
T  35914790 gtaggtcagatggaggatagtcagatccctagagacagaggaagacatagaaaaactataagagaaactattaggaaagacttgaagattaatgagttgg 35914691  T
Q  347 a 347  Q
    |    
T  35914690 a 35914690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 36069573 - 36069633
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||||||||||||| |||||   ||| ||||| ||| ||||||||||||    
T  36069573 gatgttgtgttggatgtgtggtaagactagacgggataagattagaaacgacaacattaga 36069633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 43737812 - 43737752
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| ||| ||||| ||||  ||||||||||| ||| |||||||||| ||||||||||    
T  43737812 cggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 357
Target Start/End: Complemental strand, 24549854 - 24549767
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||| |||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  24549854 aatcactagaggtagaagaagacctgaaagaactataagagaaactattaagaaagatctagagattaatgagttggattgaaatatg 24549767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 380
Target Start/End: Original strand, 45601600 - 45601702
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| ||||||||| || ||||||||||||||| ||||||||||||||| |||||| ||||||||||  | ||||||| ||||| | |||| ||||    
T  45601600 gaggtagaggaagacctagaaaaactataagagaaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaacactatg 45601699  T
Q  378 gtg 380  Q
    |||    
T  45601700 gtg 45601702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 9778563 - 9778624
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||    
T  9778563 cggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 348
Target Start/End: Complemental strand, 28628114 - 28628021
Alignment:
Q  255 gatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||  ||||||  |||| ||| ||||||||| || |||||||||||||||||||| ||||||| || |||||| ||||||||||    
T  28628114 gatggaggatagtcaaatcacaagaggtagaggaagacctagaaaaactataagagaaactattaggaaagatttagagattaatgagttggat 28628021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 29653699 - 29653619
Alignment:
Q  283 agaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    ||||||||||| | || |||| |||||||||||||||||||||||||| |||||| |||||| ||| || |||||||||||    
T  29653699 agaagaagaccaagaaaaactgtaagagaaactattaagaaagatctagagattaatgagttagatagaaatatgatatat 29653619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 40008777 - 40008709
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||| ||||||||||||| | ||||||||| || |||| ||||||||||||||||    
T  40008777 gagatgaagatgttgcgtaggatgtgtggtaaaactagacaaaaaagaattagaaatgacaacattaga 40008709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 12966149 - 12966239
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    ||||||||| || ||||||||||||||||||||||||| || || |||||| ||| |||||| || ||||| ||||||| ||| |||||||    
T  12966149 gaagacctagaaaaactataagagaaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattatg 12966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 33072875 - 33072944
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| |||||||||  ||||||| |||||||    
T  33072875 agagatgatgatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattaga 33072944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 37617865 - 37617934
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| |||||||||  ||||||| |||||||    
T  37617865 agagatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattaga 37617934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 30814851 - 30814771
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagatt 336  Q
    ||||||||||||   |||||| |||| ||| ||||||||| ||  |||||||||||||||||||||||||||||| |||||    
T  30814851 atggaggatagtcagatcactagaggcagaggaagacctagaaacactataagagaaactattaagaaagatctagagatt 30814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 34869339 - 34869410
Alignment:
Q  21 gtagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  34869339 gtagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 34869410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 393
Target Start/End: Complemental strand, 19262587 - 19262501
Alignment:
Q  307 agagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgattcat 393  Q
    |||||||||||| ||||  ||||| |||||| |||||||||| | |||||||||||||| | |||||||||| |  |||||||||||    
T  19262587 agagaaactatttagaagcatctagagattaatgagttggatagggatatgatatatgatagaacattatggcggtgtttgattcat 19262501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 5409832 - 5409771
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| ||||| ||||||||||  ||||||||| |||||||||||    
T  5409832 cggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 14593682 - 14593751
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||||||||||||| |||||  ||  | |||| ||||||||||||||||    
T  14593682 agagatgaggatgttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattaga 14593751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 30144909 - 30144978
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    |||||||| || ||||||  ||||||||||||||||||||||| |||||| |||||||||| | ||||||    
T  30144909 aagacctataaaaactattcgagaaactattaagaaagatctagagattaatgagttggatagggatatg 30144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 30200320 - 30200251
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||| |||||||||||||||||||||||    ||| ||||| ||||||||||||||||    
T  30200320 agagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacattaga 30200251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 35906562 - 35906493
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  35906562 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 35906493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 36651915 - 36651984
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  36651915 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 36651984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 38135395 - 38135302
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||||||||   |||| | |||| ||| ||||||||| || || |||||||||||||||||| |||||| || |||||| |||||||||    
T  38135395 agatggaggatagtcagatcattagaggcagatgaagacctagaaaaagtataagagaaactattaaaaaagatttagagattaatgagttgga 38135302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 39811882 - 39811947
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||||||| ||||||||||||||||| |||||   ||||||||| ||||||||||||||||    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattaga 39811947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 1569162 - 1569210
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  1569162 aactataagagtaactattaagaaagatctagagattaatgagttggat 1569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 24550048 - 24549968
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagattgagagctat 103  Q
    |||||||| ||||||| ||||||||||| |||||| |||| | |||| ||||| |||||| ||||||||| ||||| ||||    
T  24550048 agagatgaggatgttgtgttggatgtgttgtaagactagatagaatatgattagaaatgataacattagagtgagatctat 24549968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 380
Target Start/End: Complemental strand, 9797853 - 9797762
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||| ||||||||||| |||| |||||||||||    || |||||| |||||||||| |||||||||| ||||| | |||||| |||||    
T  9797853 agacctagaacaactataaaagaagctattaagaaaaccatagagattaatgagttggatagagatatgatgtatgatataacattgtggtg 9797762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 27022057 - 27021998
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||||| ||||| ||||||  ||||||||| ||||||||||||||||    
T  27022057 atgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacattaga 27021998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 348
Target Start/End: Original strand, 30664715 - 30664762
Alignment:
Q  301 actataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  30664715 actataaaagaaactattaagaaagatctagagattaatgagttggat 30664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 365
Target Start/End: Complemental strand, 32368471 - 32368408
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||||| |||||||| ||||| || ||||||||||||||||| || ||||| |||||||    
T  32368471 ctataagagaagctattaaggaagatttagagattagtgagttggatcgaaatatggtatatga 32368408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 40830318 - 40830436
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaa 369  Q
    ||||||| |||  ||| ||||||||| || | |||||||||||||||||||||| |||||| | |||| ||||||| | |  |||||||||||||| | |    
T  40830318 aatcactagagacagaggaagacctagaaaatctataagagaaactattaagaaggatctagaaattaatgagttgta-tatgatatgatatatgataga 40830416  T
Q  370 acattatggtgccgtttgat 389  Q
    |||||| || | ||||||||    
T  40830417 acattacggaggcgtttgat 40830436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 377
Target Start/End: Complemental strand, 21517529 - 21517439
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    ||||||||| || ||||||||||||||||||||| ||| || || |||||| | ||||||||  | ||||||| ||||| | |||||||||    
T  21517529 gaagacctagaaaaactataagagaaactattaaaaaatatttagagattaataagttggatccaaatatgatttatgatataacattatg 21517439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 41461235 - 41461293
Alignment:
Q  290 gacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| |||| ||||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  41461235 gacccaaaaaaactataagagaaactattaataaagatctagtgattaatgagttggat 41461293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 41483639 - 41483697
Alignment:
Q  306 aagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatg 364  Q
    ||||||||||||||||||||||||| | ||||  |||||||||  ||||||||||||||    
T  41483639 aagagaaactattaagaaagatctagaaattaacgagttggatatagatatgatatatg 41483697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 41578248 - 41578194
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||| |||||||| || || ||||||||||||||||| ||||||||||||||||    
T  41578248 aaactgttaagaaacatatagagattagtgagttggatagagatatgatatatga 41578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 5335843 - 5335912
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||| ||||||||||||| |||||| |||   |||| |||||| |||||||||    
T  5335843 agagatgaggatgttgcgttgaatgtgtggtaagactagacagaatgcaattagaaatgataacattaga 5335912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 13859369 - 13859300
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||| | ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  13859369 agagatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccattaga 13859300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 16013205 - 16013274
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||||||||||||| |||||  ||    |||| ||||||||||||||||    
T  16013205 agagatgaggatgttgcgttggatgtgtggtaagactagacggaaccaaattagaaatgacaacattaga 16013274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 21864866 - 21864927
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| ||||| ||| |||||   |||||||||||||||||||||    
T  21864866 cggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 25822724 - 25822785
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| |||| ||||| | ||||||||||||||||||| ||| |||||||    
T  25822724 cggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatag 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 28858191 - 28858256
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||| |||||||||||||||||||| |||||| | |||||||| || ||||  |||||||    
T  28858191 aactataagacaaactattaagaaagatctagagattaataagttggatagaaatattttatatga 28858256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 31005144 - 31005213
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||| ||| |||||||    
T  31005144 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccattaga 31005213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 36514566 - 36514497
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||||||||||||| || ||   |||| |||| ||| ||||||||||||    
T  36514566 agagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacattaga 36514497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 30914632 - 30914560
Alignment:
Q  306 aagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||| | ||| |||||| |||||| |||||||||| | |||||||||||||| | ||| ||||||    
T  30914632 aagagaaactatcatgaaggatctagagattaatgagttggatagggatatgatatatgatagaactttatgg 30914560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 39906730 - 39906662
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||| ||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  39906730 gagatgaggatgctgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 39906662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 40139079 - 40139019
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||||||||||||||||||||| |||||| || ||| ||| || |||||| ||||||    
T  40139079 taagagaaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatga 40139019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 43281982 - 43282050
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacat 373  Q
    |||||||||| |||||| |||||||| |||||| ||||||||||  | ||||| | |||||||||||||    
T  43281982 taagagaaacaattaagtaagatctagagattaatgagttggatcaaaatatggtttatgacaaaacat 43282050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 598268 - 598327
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| ||||| ||||||||||  || |||||| |||||||||||    
T  598268 gacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 22174117 - 22174224
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaa 370  Q
    |||||| |||| ||| ||| || || || |||||||||||||||||| || ||||||||| |||||| ||| || ||| || ||||| ||| ||| | ||    
T  22174117 atcactagaggcagaggaaaacgtagaaaaactataagagaaactataaacaaagatctagagattaatgaattagatagaaatatggtatgtgatagaa 22174216  T
Q  371 cattatgg 378  Q
    ||||||||    
T  22174217 cattatgg 22174224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 43027463 - 43027404
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| ||||| ||||||||||  | ||||||| |||||||||||    
T  43027463 gacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 11593881 - 11593947
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  ||| |||||  ||||||| ||||    
T  11593881 agagatgaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccatt 11593947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 24339711 - 24339773
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| |||||| ||||||| ||||| ||||||||||  ||||||| | ||||||||||||    
T  24339711 cggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcataga 24339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  119 acacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||| |||||||||||||| | ||| ||||||||||  ||||||||| |||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 38606927 - 38606993
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    |||||||  |||||||| |||||| ||||||||| ||||||  |||||||||  |||||||||||||    
T  38606927 gagatgataatgttgcgctggatgagtggtaagactagacatgataggattaggaatgacaacatta 38606993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 43282330 - 43282392
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||| ||||||||||| |||||||||||||  ||||||  ||| ||||| |||||||||||||    
T  43282330 atgaggatgttgcgttagatgtgtggtaagtctagacatgatatgattagaaatgacaacatt 43282392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 14593876 - 14593929
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaa 323  Q
    ||||||| |||| ||  ||||||||| || ||||||||||||||||||||||||    
T  14593876 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 14593929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 24105740 - 24105797
Alignment:
Q  120 cacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||| ||||| |||||||| |  |||||||| ||||||||||||    
T  24105740 cacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 9191928 - 9191984
Alignment:
Q  307 agagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    |||||||||||||||||||||||| |||||| | | || ||| || |||||||||||    
T  9191928 agagaaactattaagaaagatctagagattaataaatttgatagaaatatgatatat 9191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 13770754 - 13770810
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgctt 172  Q
    |||||||||||||||||||||| ||| | ||||||||||  | ||||||| ||||||    
T  13770754 cggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 16013416 - 16013452
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaa 323  Q
    ||||||||| || ||||||||||||||||||||||||    
T  16013416 gaagacctagaaaaactataagagaaactattaagaa 16013452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 20549849 - 20549909
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    |||||||||||| |||||||||| | || ||||||||||  ||||||| | ||||||||||    
T  20549849 cggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 21568616 - 21568560
Alignment:
Q  122 caacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||| |||||| |||| ||||| | || |||||| ||||||||||||||||||||||    
T  21568616 caacgcgtgtcggacaccgggacatgcttaatctgaggagtgtctgtgcttcataga 21568560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 28542069 - 28542029
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattga 351  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  28542069 aaactattaagaaagatttagagattaatgagttggattga 28542029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 45841333 - 45841265
Alignment:
Q  31 agatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagattgagag 99  Q
    |||||||| |||| |||||||||||| |||||  | ||| | ||| ||||||||||||||||| |||||    
T  45841333 agatgttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagag 45841265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 47848596 - 47848664
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||| |||||||||||||||||| |||||   ||||||| | || ||| |||||||||    
T  47848596 gagatgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattaga 47848664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 254 - 318
Target Start/End: Original strand, 47848774 - 47848838
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactatt 318  Q
    ||||||||||||||   |||||| |||| ||| ||||| ||| || |||||||||||||||||||    
T  47848774 agatggaggatagtctgatcactagaggcagaggaagaactagaaaaactataagagaaactatt 47848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 379
Target Start/End: Complemental strand, 26784529 - 26784397
Alignment:
Q  247 gtaggtaagatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    |||| ||||||||||| ||||  ||||||| |||| |||  |||||||| || |||||||||||||||||||||||||||| || |||||| |||||||     
T  26784529 gtagataagatggagggtagtcaaatcactagaggcagagaaagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttga 26784430  T
Q  347 attgagatatgatatatgacaaaacattatggt 379  Q
    || || ||||| ||||||| |||||||| ||||    
T  26784429 atagaaatatggtatatgataaaacattttggt 26784397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 8197689 - 8197588
Alignment:
Q  289 agacctaaaacaactat-aagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttg 387  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| || ||||||||||||| | || ||||||| | ||||||    
T  8197689 agacctaaaaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttg 8197590  T
Q  388 at 389  Q
    ||    
T  8197589 at 8197588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 8202449 - 8202348
Alignment:
Q  289 agacctaaaacaactat-aagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttg 387  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||| |||||||||| || ||||||||||||| | || ||||||| | ||||||    
T  8202449 agacctaaaaaaactatgaagagaaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttg 8202350  T
Q  388 at 389  Q
    ||    
T  8202349 at 8202348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 37470282 - 37470180
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgttt 386  Q
    |||||||| ||| |||||||||||||||||||| || ||||||| |||||| |||||||||| || |||||  |||||| | ||||||||||||  ||||    
T  37470282 gaagacctgaaaaaactataagagaaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattatggtgtagttt 37470183  T
Q  387 gat 389  Q
    |||    
T  37470182 gat 37470180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 33504323 - 33504448
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacaga-ttagtgagttggattgag 352  Q
    ||||||||| ||||   |||||| |||| |||  || ||||| || ||||||||||||||||||||||||||||||| ||| ||| | |||||||||||     
T  33504323 agatggagggtagtcagatcactagaggcagagaaaaacctagaaaaactataagagaaactattaagaaagatctagagatttaataagttggattgaa 33504422  T
Q  353 atatgatatatgacaaaacattatgg 378  Q
    ||||| ||||||| | ||||||||||    
T  33504423 atatggtatatgatagaacattatgg 33504448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 395
Target Start/End: Complemental strand, 37481799 - 37481658
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    |||||||||  ||||  ||||||||||| ||| ||||||| | || |||||| ||||||||||||||||||||||||  ||| | ||||||||||  | |    
T  37481799 agatggaggggagttagatcactggaggtagatgaagaccaagaaaaactattagagaaactattaagaaagatctagcgataaatgagttggataaaaa 37481700  T
Q  354 tatgatatatgacaaaacattatggtgccgtttgattcatct 395  Q
    |||| ||| ||| | || ||||||||| | ||||||||||||    
T  37481699 tatggtatttgatagaaaattatggtgtcttttgattcatct 37481658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 23714609 - 23714549
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagat 93  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  23714609 atgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagat 23714549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 24102281 - 24102221
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagat 93  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  24102281 atgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagat 24102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 33287554 - 33287644
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    ||||||||| || ||||||||||||||||||||||||||||||| | |||| |||||| ||| || ||||| | ||||| | |||||||||    
T  33287554 gaagacctagaaaaactataagagaaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattatg 33287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 377
Target Start/End: Original strand, 43832231 - 43832321
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||||||||||  |||||||||||||||||||||||| |||||| |||||| ||||||||||   |||||||| ||| | | |||||||||    
T  43832231 gaagacctaaacaaactataagagaaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaacattatg 43832321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 374
Target Start/End: Complemental strand, 19235150 - 19235046
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaa 369  Q
    ||||||| |||  ||| ||||||||| || ||||||||||||||||||| ||||||||||| |||||| ||| |||||| || ||||| ||| ||| | |    
T  19235150 aatcactagagatagaggaagacctagaaaaactataagagaaactattgagaaagatctagagattaatgatttggatagaaatatggtatttgataga 19235051  T
Q  370 acatt 374  Q
    |||||    
T  19235050 acatt 19235046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 38435054 - 38435146
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||   |||||| |||| ||| | ||||||| || ||||| ||||||||||||||||||||||||| |||||| || |||||||    
T  38435054 atggaggatagtcagatcactagaggcagaggtagacctagaaaaactacaagagaaactattaagaaagatctagagattaatgtgttggat 38435146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 1626333 - 1626404
Alignment:
Q  292 cctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    |||||||  |||||||||||||||||||||||||||||| |||||| ||||||| ||  | |||||||||||    
T  1626333 cctaaaattactataagagaaactattaagaaagatctagagattaatgagttgtataaaaatatgatatat 1626404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 31254445 - 31254512
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||||||||||| |||||| ||||||| || || ||||||| ||||||| ||||||||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgatttatgacagaacattatgg 31254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 378
Target Start/End: Complemental strand, 42149793 - 42149718
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||| | ||||| | ||||||||||    
T  42149793 tataagagaaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatgg 42149718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 380
Target Start/End: Complemental strand, 9556551 - 9556425
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||  ||  ||| |||| | | ||||||||  || |||||||||| ||||||||||||||||||||  ||||| ||||||||||  |||    
T  9556551 agatggaggatagtcaaactactagaggcaaaggaagaccttgaaaaactataagataaactattaagaaagatctagtgattaatgagttggatcaaga 9556452  T
Q  354 tatgatatatgacaaaacattatggtg 380  Q
    |||| | ||||| | ||||||| ||||    
T  9556451 tatggtttatgatagaacattagggtg 9556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 41779243 - 41779181
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||||| |||||| ||||||||| |||||| ||||||| || ||||||||||||||||    
T  41779243 tataagagaaattattaaaaaagatctagagattaatgagttgaatagagatatgatatatga 41779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 4807513 - 4807582
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||||||||||||  |||||||| ||||||  |||||||||| ||||||| |||||||    
T  4807513 agagatgaggatgttgcgttggatgaatggtaagaatagacatgataggattatgaatgacatcattaga 4807582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 11006848 - 11006901
Alignment:
Q  295 aaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||||||||||||||||| ||| |||||| || |||||||    
T  11006848 aaaacaactataagagaaactattaagaaagacctagagattaatgggttggat 11006901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 12026170 - 12026081
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||||||||  ||  |||||||| |  ||||||| ||||||||||||||||||||||| |||||| |||||| ||| || ||||||||    
T  12026170 atcactggaggcggattaagacctagagaaactataggagaaactattaagaaagatctagagattaatgagtttgatagaaatatgata 12026081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 19337209 - 19337140
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaaga-ttagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||| ||||||||||||||||||| |||| ||  |||||||||||||||| |||||||||    
T  19337209 gagatgaggatgttacgttggatgtgtggtaagacttaggcaggataggattataaatgagaacattaga 19337140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 347
Target Start/End: Original strand, 26670892 - 26670961
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||| ||| ||||||||| || |||||||| ||||||||||||||||||| || |||||| |||||||||    
T  26670892 gaggtagaggaagacctacaaaaactataaaagaaactattaagaaagatttagagattaatgagttgga 26670961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 30717520 - 30717459
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||| |||||  ||||||||||||||| |||||||||| |||||||||||    
T  30717520 cggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 38117160 - 38117099
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||| ||||| |||||||||||    
T  38117160 cggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 9556720 - 9556660
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||||||||||||||||||   ||| ||||| ||||||||||||||||    
T  9556720 gatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattaga 9556660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 348
Target Start/End: Original strand, 19024328 - 19024372
Alignment:
Q  304 ataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  19024328 ataagagaaactattaagaaagatctaaagattaatgagttggat 19024372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38429806 - 38429874
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  38429806 gagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 38429874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 3865993 - 3866059
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| ||||    
T  3865993 agagatgatgatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccatt 3866059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 26769580 - 26769642
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| ||||||||||||||  |||| ||||||||||  ||||||||| ||||||||||||    
T  26769580 cggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcataga 26769642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 346
Target Start/End: Complemental strand, 45640697 - 45640615
Alignment:
Q  264 tagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    |||| |||||||| |||| |||  |||||| |||| | || |||||||||||||||||||||||||| |||||| | ||||||    
T  45640697 tagtccaatcactagaggcagataaagacccaaaaaagctttaagagaaactattaagaaagatctagagattaataagttgg 45640615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 9579061 - 9579000
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaa 85  Q
    ||||| |||||||||||||||||||||||||||| |||| |  |||| |||| |||||||||    
T  9579061 gagataaagatgttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaa 9579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 18188901 - 18188958
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||||||||||||| ||||||||||| |||||| |||| ||||| || ||||||||    
T  18188901 tataagagaaactattcagaaagatctagagattaatgagctggatagaaatatgata 18188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 36039144 - 36039213
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||| ||||||||||||| ||| |||||  |  ||  |||||||||||||||||||||    
T  36039144 agagatgaagatgttgtgttggatgtgtggcaagtttagatgagttaaaattataaatgacaacattaga 36039213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 36183372 - 36183433
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  |||||||    
T  36183372 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 36183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 38453046 - 38452981
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  38453046 atgaggatgttgcgttggatgagtggtaagactagacatcataggattaggaatgacaccattaga 38452981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 42511383 - 42511322
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||||||||||||||  |||| ||| ||||||  ||||||||| |||||||||||    
T  42511383 cggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 45077670 - 45077727
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatg 81  Q
    ||||||| |||||||||||||||||||||||||| ||||| | |||| |||| |||||    
T  45077670 gagatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 23997539 - 23997607
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||||||| |||||| ||||||||| ||||||  || ||||||  ||||||| |||||||    
T  23997539 gagatgaagatgttgcgctggatgagtggtaagactagacatgatcggattaggaatgacaccattaga 23997607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 365
Target Start/End: Original strand, 42092652 - 42092728
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||| || ||||||| ||||||||||||| |||||| || |||||| | |||||||| | |||| |||||||||    
T  42092652 agacctagaaaaactataggagaaactattaaaaaagatgtagagattaattagttggatagtgatacgatatatga 42092728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 2906127 - 2906040
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||| |||||||||||||||| || || |||| | ||||||||||  ||| ||| ||||||| | || ||||||||| ||||||||    
T  2906127 ctataaaagaaactattaagaaaaatgtagagatcaatgagttggataaagaaatgttatatgatagaatattatggtgtcgtttgat 2906040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 9647966 - 9647927
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattaga 62  Q
    |||||||| |||||||||||||||||||||||||| ||||    
T  9647966 agagatgaggatgttgcgttggatgtgtggtaagactaga 9647927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 300 - 347
Target Start/End: Complemental strand, 23915829 - 23915782
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||||||||||||||||||| ||||| |||||| |||| ||||    
T  23915829 aactataagagaaactattaagaaaaatctagagattaatgaggtgga 23915782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 11223853 - 11223792
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| |||| |||| |||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  11223853 cggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 24009353 - 24009415
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| |||||||||| ||||||||||||    
T  24009353 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 29548786 - 29548736
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagatta 337  Q
    |||||||| ||| |||||||||||||| ||||||||||||| || ||||||    
T  29548786 gaagacctgaaaaaactataagagaaattattaagaaagatttagagatta 29548736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 37419823 - 37419873
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||| ||||| ||||||||||  ||||||||| |||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Original strand, 42543370 - 42543428
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || |||||||||||||||||||| ||| |||||| |||| | |||||||||    
T  42543370 agacctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 42543428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 44415782 - 44415836
Alignment:
Q  306 aagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    ||||||||||||||||||||||||| |||||   |||||| ||||||||| ||||    
T  44415782 aagagaaactattaagaaagatctagagattgaggagttgaattgagatacgata 44415836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 44437868 - 44437810
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || ||||||| |||||||||||||||| |||||| |||| | |||||||||    
T  44437868 agacctagaaaaactatatgagaaactattaagaaggatctagagataaatgagttgga 44437810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 2610449 - 2610518
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||| ||||||||||| ||||||||| ||||||  | |||||||  ||||||| |||||||    
T  2610449 agagatgaggatgctgcgttggatgagtggtaagactagacaggacaggattaggaatgacaccattaga 2610518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 3244012 - 3243943
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| | |||||||||||||||| || |||||| || |||  |||||||||| ||||||| |||||||    
T  3244012 agagataaggatgttgcgttggatgagtagtaagactacacatgataggattatgaatgacaccattaga 3243943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 4598921 - 4598856
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||||||||||||||||||||||||| |||||   |||| |||  ||||||| ||||||||    
T  4598921 atgatgatgttgcgttggatgtgtggtaagactagacgggatagaattcaaaatgacgacattaga 4598856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 7825279 - 7825340
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    |||||| | |||||||||||||||||||||||||| |||||   ||| ||||| ||||||||    
T  7825279 agagattaggatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgaca 7825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 21834475 - 21834540
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    ||||| ||||||||| |||||||||||||||||| ||||  | ||| ||||| |||| ||||||||    
T  21834475 gagataaagatgttgagttggatgtgtggtaagactagatgagataagattagaaattacaacatt 21834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 177
Target Start/End: Original strand, 30394526 - 30394555
Alignment:
Q  148 cctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||||||||||||||||||||||    
T  30394526 cctaatctaaggagtgtctgtgcttcatag 30394555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 35056937 - 35056998
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||||||  |  | ||||||||||| ||||||||| |||||||||||    
T  35056937 cggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 349
Target Start/End: Original strand, 37282237 - 37282286
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    |||||||||||||||||||| ||||||| ||   ||||||||||||||||    
T  37282237 aactataagagaaactattacgaaagatttagctattagtgagttggatt 37282286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 38860328 - 38860369
Alignment:
Q  304 ataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    ||||||||||||||||||||||||||| |||||  |||||||    
T  38860328 ataagagaaactattaagaaagatctagagattcatgagttg 38860369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 43752129 - 43752056
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    |||||||||||| |   ||||||||||| | | ||||||||| || |||||| ||||||||||||| |||||||    
T  43752129 agatggaggatactcagatcactggaggcataggaagacctagaaaaactatcagagaaactattaggaaagat 43752056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 380
Target Start/End: Original strand, 6219069 - 6219191
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagata 355  Q
    ||||||||||||   ||||||||||| |||  ||||||| | | |||||||| | |||| |||| ||||||| || ||||||||||||||||  || |||    
T  6219069 atggaggatagtgggatcactggaggcagagaaagaccttaga-aactataatataaac-attaggaaagatttagagattagtgagttggaccgaaata 6219166  T
Q  356 tgatatatgacaaaacattatggtg 380  Q
    || | ||||| | ||||||||||||    
T  6219167 tggtttatgatagaacattatggtg 6219191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 7615288 - 7615332
Alignment:
Q  181 gagagacttgggttaacacctatcgtataaaagatggtggaaact 225  Q
    |||||||||||| |||||||||| ||| ||||||||||| |||||    
T  7615288 gagagacttggggtaacacctatagtagaaaagatggtgcaaact 7615332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 8491268 - 8491328
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    ||||||||||||||||||||||||| || || |||   | ||||||||| |||||||||||    
T  8491268 tataagagaaactattaagaaagatttagaggttaacaatttggattgaaatatgatatat 8491328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 9496014 - 9496090
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||||||||| |||||||| || || ||| ||||||||||  | ||||| | ||||| | ||||||||||    
T  9496014 ctataagagaaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatgg 9496090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 12141668 - 12141768
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| ||||||||| || | ||||| |||||||||||| ||||||  || |||||| ||| ||||||  | ||||| ||||||| | |||||||||    
T  12141668 gaggtagaggaagacctagaaaagctataggagaaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattatg 12141767  T
Q  378 g 378  Q
    |    
T  12141768 g 12141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 12224281 - 12224337
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgctt 172  Q
    ||||||| | ||||||||||||  |||| |||||||||| ||||||||| |||||||    
T  12224281 cggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 14255500 - 14255544
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaata 69  Q
    |||||| |||||||| || |||||||||||||| |||||||||||    
T  14255500 agatgaggatgttgctttcgatgtgtggtaagactagacaaaata 14255544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 378
Target Start/End: Original strand, 19855586 - 19855686
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||| ||| ||||||||| |  |||||||| |||||||||||||||||||| | || ||| |||| ||||| || | ||| ||||||| | | |||||||    
T  19855586 gaggcagaggaagacctagataaactataaaagaaactattaagaaagatccagaggttaatgagctggatagaaacatggtatatgatagagcattatg 19855685  T
Q  378 g 378  Q
    |    
T  19855686 g 19855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 27286282 - 27286222
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| |||| ||||||||| ||||| |   ||||||||| ||||||||||||||||||    
T  27286282 cggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgcttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 36756331 - 36756275
Alignment:
Q  119 acacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    ||||||||| ||||||||| ||  | ||||||||||  |||||||||||||||||||    
T  36756331 acacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 38434873 - 38434941
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||| ||||||| ||||||| | ||||| | | | ||||| ||||||||||||||||    
T  38434873 gagatgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattaga 38434941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 4e-23; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 271 - 378
Target Start/End: Complemental strand, 34670 - 34563
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaa 370  Q
    |||||| |||| ||| ||||||||| || ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||| | ||||| | ||    
T  34670 atcactagaggcagaggaagacctagaaaaactataagagaaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaa 34571  T
Q  371 cattatgg 378  Q
    ||||||||    
T  34570 cattatgg 34563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 378
Target Start/End: Original strand, 8364656 - 8364780
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||| ||   |||||| |||| ||| |||||||||||| |||||||||||||||||||||||||||| || | |||| | ||||||| ||| |    
T  8364656 agatggaggattgtcagatcactagaggaagatgaagacctaaaaaaactataagagaaactattaagaaagatttagaaattaataagttggactgaaa 8364755  T
Q  354 tatgatatatgacaaaacattatgg 378  Q
     ||| | ||||| | ||||||||||    
T  8364756 catggtttatgatagaacattatgg 8364780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 9568590 - 9568650
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||    
T  9568590 gatgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaacattaga 9568650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 10617400 - 10617323
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| |||| ||||||| ||||| || ||||||||||||||| |||||||| |||||| |||||| |||||||||    
T  10617400 aatcactagaggtagaagaaaacctagaaaaactataagagaaaccattaagaaggatctagagattaatgagttgga 10617323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 33998365 - 33998296
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||||||||||||||||||||||||| ||||    ||||||||| ||||||| ||||||||    
T  33998365 agagatgaagatgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattaga 33998296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 35043801 - 35043733
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||||||| ||||||  |||||||||||||||  |||||||||| ||||||| |||||||    
T  35043801 gagatgaagatgttgcgctggatgattggtaagattagacatgataggattatgaatgacaccattaga 35043733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 1747799 - 1747712
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||| ||| ||||||||| || ||| ||||||||||||  |||||| |||||| |||||| ||||||||||  |||||||||||||||    
T  1747799 gaggcagaggaagacctagaaaaaccataagagaaactggtaagaaggatctagagattaatgagttggataaagatatgatatatga 1747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 1681670 - 1681597
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||||||||| |  ||||||||||||||||||||| |||||| |||||| |||||||| | | |||||||||    
T  1681670 gaagacctaaaaaagttataagagaaactattaagaaggatctagagattaatgagttgggtagggatatgata 1681597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 28085297 - 28085366
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  28085297 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccattaga 28085366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 10100217 - 10100149
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||||| |||| ||||||||| ||||||| ||| ||||| |||||||| |||||||    
T  10100217 gagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaatgacaccattaga 10100149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 31831995 - 31831947
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  31831995 aactatcagagaaactattaagaaagatctagagattactgagttggat 31831947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 341
Target Start/End: Original strand, 579518 - 579605
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtga 341  Q
    ||||||||||||||   |||||| |||| |||  ||||||| ||| |||| ||||||||||||||||||||||| || | ||||||||    
T  579518 agatggaggatagtctgatcactagaggcagagaaagacctcaaaaaactgtaagagaaactattaagaaagatatagaaattagtga 579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 5258501 - 5258450
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||| |||||||    
T  5258501 atgttgcgttggatgagtggtaagactagacaagataggattatgaatgaca 5258450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 7977831 - 7977770
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||  ||||||||||||  | ||||||||||||||||||||  |||||||||||    
T  7977831 cggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 16766766 - 16766827
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||||||| ||||| ||||||||||  | || |||| |||||||||||    
T  16766766 cggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 9594072 - 9594004
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||||||||||| ||||||||| |||||   |||||||||  ||||||| |||||||    
T  9594072 gagatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgacaccattaga 9594004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 10617588 - 10617525
Alignment:
Q  21 gtagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaa 85  Q
    |||||||||| ||| |||||||||||||||| ||||| ||||| |||||| |||| |||||||||    
T  10617588 gtagagatgaggat-ttgcgttggatgtgtgttaagactagacgaaatagaattagaaatgacaa 10617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 378
Target Start/End: Complemental strand, 33997726 - 33997602
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||| ||||  || |||| |||| ||| ||||||||   | |||||||||||||||||||||||||   ||| |||||| |||||||||| || |    
T  33997726 agatggagggtagtcaaaacactagaggcagaggaagaccttggaaaactataagagaaactattaagaaaagcctagagattaatgagttggatagaaa 33997627  T
Q  354 tatgatatatgacaaaacattatgg 378  Q
    |||| || ||||   ||||||||||    
T  33997626 tatggtacatgattgaacattatgg 33997602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 12696387 - 12696446
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    ||||||| ||||||||| |||| ||||| || ||| ||| ||||||||||||||||||||    
T  12696387 cggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 378
Target Start/End: Complemental strand, 35199755 - 35199681
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||| ||||||||||| |||||||||| |||||| |||||| ||| || ||||| ||||||| | ||||||||||    
T  35199755 tataaaagaaactattaggaaagatctagagattaatgagttagatagaaatatg-tatatgatagaacattatgg 35199681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 348
Target Start/End: Complemental strand, 43202 - 43140
Alignment:
Q  287 gaagacctaaaacaactat-aagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||| ||||||| | ||||||||||||||| ||||||||| ||| || ||||||||||    
T  43202 gaagacctagaacaacttttaagagaaactattaataaagatctagagagtaatgagttggat 43140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 7080477 - 7080523
Alignment:
Q  291 acctaaaacaactataagagaaactattaagaaagatctacagatta 337  Q
    ||||| || |||||||||||||||||| |||||||||||| ||||||    
T  7080477 acctataaaaactataagagaaactatcaagaaagatctaaagatta 7080523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 7513343 - 7513305
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattaga 62  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  7513343 gagacgaagatgttgcgttggatgtgtggtaagactaga 7513305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 9027236 - 9027286
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||| ||||| ||| |||||| ||||||||| ||||||||||||    
T  9027236 cgtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 9593866 - 9593796
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| ||| ||||||||| || || ||||||||||||||||| ||||||  || |||||| ||||||||||    
T  9593866 gaggtagaggaagacctagaaaaattataagagaaactattaggaaagacttagagattaatgagttggat 9593796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 10827545 - 10827507
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatc 154  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  10827545 cggacacaacacgtgtccgacatcggaatacgcctaatc 10827507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 31818663 - 31818725
Alignment:
Q  286 agaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||| || |||||||||||||||||||| ||||| | |  |||||| ||||||||||    
T  31818663 agaagacctagaaaaactataagagaaactattaggaaaggtttggagattaatgagttggat 31818725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 34595192 - 34595254
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| ||||||||| |||| ||||| || |||||||  ||||||||| ||||||||||||    
T  34595192 cggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcataga 34595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 4948486 - 4948405
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagat 335  Q
    ||||||| ||||||  || |||| |||| ||| ||||||||| || ||||| |||| |||||||| ||||||||||| ||||    
T  4948486 agatggaagatagtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactattgagaaagatctagagat 4948405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 4955457 - 4955376
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagat 335  Q
    ||||||| ||||||  || |||| |||| ||| ||||||||| || ||||| |||| |||||||| ||||||||||| ||||    
T  4955457 agatggaagatagtcaaaccactagaggtagaggaagacctacaaaaactaaaagaaaaactattgagaaagatctagagat 4955376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 5129198 - 5129129
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||| ||||||||||||||| ||    || |||||| ||||||||| ||||||    
T  5129198 agagatgaggatgttgcgttgaatgtgtggtaagattcgatgtgatcggattagaaatgacaatattaga 5129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 8365509 - 8365448
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||||||  |||| ||||||||||  |||||| || |||||||||||    
T  8365509 cggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 10339115 - 10339054
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||| |||||||||  |||| ||||||||||  ||||||||| |||||||||||    
T  10339115 cggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 17327651 - 17327590
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  |||| ||||||||||  ||||||||| |||||||||||    
T  17327651 cggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 28152156 - 28152217
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| ||||| | ||||||||  ||||||||  |||||||||||    
T  28152156 cggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 33001290 - 33001229
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| |||| ||  |||||||||||| || |||||| ||||||||||||    
T  33001290 cggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatag 33001229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 38900 - 38956
Alignment:
Q  291 acctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||| || |||||||||||||||||||| ||| |||||| |||| | |||||||||    
T  38900 acctagaaaaactataagagaaactattaggaaggatctagagataaatgagttgga 38956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 3209460 - 3209520
Alignment:
Q  119 acacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatagac 179  Q
    |||| ||||| |||||||| | ||| ||||||||||  |||||||| ||||||||||||||    
T  3209460 acacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatagac 3209520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 5080777 - 5080845
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||| |||||   ||||||||||||||| |||| |||||  ||||||| |||||||    
T  5080777 gagatgaggatgttgcgctggataactggtaagattagacataataagattaggaatgacaccattaga 5080845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 6293730 - 6293690
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagac 63  Q
    |||||||| ||||||| |||||||||||||||| |||||||    
T  6293730 agagatgaggatgttgtgttggatgtgtggtaaaattagac 6293690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 7248428 - 7248488
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||| |||||||||| ||||| ||| | ||||  ||||||||| |||||||||||    
T  7248428 ggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 9568825 - 9568865
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    ||||| ||| ||||||||||||||||||||||| |||||||    
T  9568825 gaagatctagaacaactataagagaaactattaggaaagat 9568865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 38868982 - 38869117
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||| ||||  ||||| | |||| ||||||||||||| || |||||||||||||| ||||||||||||||||  ||||| || ||||||| || |    
T  38868982 agatggagggtagtcaaatcattagaggcagaagaagacctagaaaaactataagagaaattattaagaaagatctagcgattaatgggttggatagata 38869081  T
Q  354 tatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||| ||||||| | |||||||||| | ||||||||    
T  38869082 tatggtatatgatagaacattatggcgtcgtttgat 38869117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 40416500 - 40416597
Alignment:
Q  283 agaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||| |||||| |||||||||| || ||||| | ||||| | ||||||||||||    
T  40416500 agaagaagacctagaaaaactataagacaaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattatggtg 40416597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 378
Target Start/End: Complemental strand, 853951 - 853843
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaa 369  Q
    ||||||| |||| ||| |||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||||||||| | || ||||||||||| | |    
T  853951 aatcactagaggcagaggaagacctaaaaaatctatacgagaaactattaagaaggatctagagattagtgagttggatagggacatgatatatgataga 853852  T
Q  370 acattatgg 378  Q
    || ||||||    
T  853851 acgttatgg 853843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 378
Target Start/End: Complemental strand, 8203287 - 8203192
Alignment:
Q  283 agaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||| |||||| |||||||||  ||| ||||||| | || | ||||||||||    
T  8203287 agaagaagacctagaaaaactataagagaaactattaaaaaagatctagagattaatgagttggacggaggtatgatagaagatagaacattatgg 8203192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 378
Target Start/End: Original strand, 8796310 - 8796433
Alignment:
Q  255 gatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagat 354  Q
    |||||||||||||   |||||| |||| ||| ||||||| | || |||| |||||||||||||||||||||||||| | |||| ||| ||||||||| ||    
T  8796310 gatggaggatagtcagatcactagaggcagaggaagaccaataaaaactttaagagaaactattaagaaagatctagatattaatgacttggattgaaat 8796409  T
Q  355 atgatatatgacaaaacattatgg 378  Q
    ||| | ||||| | ||||||||||    
T  8796410 atggtttatgatagaacattatgg 8796433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 389
Target Start/End: Original strand, 15577535 - 15577653
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaa 370  Q
    |||||| |||| ||| ||||| |||||| ||  |||||||||||||||||||| ||| || |||||| |||||||||| |||||||||||| ||| | ||    
T  15577535 atcactagaggtagaggaagatctaaaaaaataataagagaaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaa 15577634  T
Q  371 cattatggtgccgtttgat 389  Q
    |||||| |||  |||||||    
T  15577635 cattattgtgttgtttgat 15577653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 375
Target Start/End: Original strand, 42501208 - 42501329
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||| ||||  ||||| | |||| ||| ||| ||||| || |||||||||||||| |||||||||||||||| |||||| |||||||||| || |    
T  42501208 agatggagggtagtcaaatcattagaggtagaggaaaacctagaaaaactataagagaaattattaagaaagatctatagattaatgagttggatagaaa 42501307  T
Q  354 tatgatatatgacaaaacatta 375  Q
    ||||  |||||| | |||||||    
T  42501308 tatggaatatgatagaacatta 42501329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 30396868 - 30396776
Alignment:
Q  297 aacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||| |||||||||||| ||||||| |||| | |||||| |||||||||| | |||| ||||||||| | |||||||||||| ||||||||    
T  30396868 aacaaccataagagaaactgttaagaaggatccagagattaatgagttggatagggatacgatatatgatagaacattatggtggcgtttgat 30396776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 19969372 - 19969301
Alignment:
Q  276 tggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||||| || |||||||||| || ||||||||||||||||||||| ||||||||| |||||| |||||||||    
T  19969372 tggaggtaggagaagacctagaaaaactataagagaaactattaacaaagatctagagattaatgagttgga 19969301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 30834135 - 30834065
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||| ||||||||| || | |||||||||||||||||| |||||||||| |||||| ||||||||||    
T  30834135 gagggagaggaagacctagaaaagctataagagaaactattacgaaagatctagagattaatgagttggat 30834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 40920894 - 40920829
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| |||| ||||||    
T  40920894 atgaagatgttgcattggatgtgtggtaagattagacgagataggattagaaattacaatattaga 40920829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 4379927 - 4379995
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||| |||||||||||||||||| |||| || ||| ||||| ||||||||||||||||    
T  4379927 gagatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacattaga 4379995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 378
Target Start/End: Original strand, 6025721 - 6025829
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaa 369  Q
    ||||||| |||| ||| ||||||||| || |||||||||||| |||| ||| ||||||||| |||||| |||||||||| || ||||| ||| ||| | |    
T  6025721 aatcactagaggcagaggaagacctagaaaaactataagagatactagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgataga 6025820  T
Q  370 acattatgg 378  Q
    |||| ||||    
T  6025821 acatgatgg 6025829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 10585022 - 10584958
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacatta 375  Q
    |||||||||||||||||| | |||||| |||||||||  ||||||||||||||||| ||||||||    
T  10585022 aaactattaagaaagatccagagattaatgagttggacagagatatgatatatgaccaaacatta 10584958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 300 - 360
Target Start/End: Original strand, 12231511 - 12231571
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    |||||||||||| |||||||||||||||||  |||||| |||||||||| |||||||||||    
T  12231511 aactataagagagactattaagaaagatctcgagattaatgagttggatagagatatgata 12231571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 28528488 - 28528548
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||||||||||| |||||||| ||||||||||||||| |||||| |||||| |||||||||    
T  28528488 gaagacctaaaaaaactataacagaaactattaagaaggatctagagattaatgagttgga 28528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 1486705 - 1486646
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    ||||||| |||||||||||||| ||||| ||||||||||  |||||||||||||||||||    
T  1486705 cggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 5944351 - 5944414
Alignment:
Q  115 acggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||||||||| ||||||||| ||||||||||||||||  ||||||||  ||||||||||||    
T  5944351 acggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcataga 5944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 32404709 - 32404618
Alignment:
Q  253 aagatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagtt 344  Q
    |||||||||||||||   |||||  |||| ||| ||||||||| || |||||||||||||||||||| ||||||| || |||||| ||||||    
T  32404709 aagatggaggatagtcatatcacaagaggtagaggaagacctacaaaaactataagagaaactattaggaaagatttagagattaatgagtt 32404618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 43423835 - 43423922
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||| |||| ||| ||||||||| || || || |||||| || ||||||||||||||| ||||||||||||||||| || |||||    
T  43423835 aatcactagaggtagaggaagacctagaaaaattacaagagagaccattaagaaagatctagagattagtgagttggatagaaatatg 43423922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 8343047 - 8342969
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||| |||  ||| ||||||||| || ||||||||||||||| ||||| ||||||||| |||||| ||||||||||    
T  8343047 aatcactagagatagaggaagacctagaaaaactataagagaaacaattaataaagatctagagattaatgagttggat 8342969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 377
Target Start/End: Complemental strand, 33561039 - 33560917
Alignment:
Q  255 gatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagat 354  Q
    |||||||| ||||  ||||||| |||| ||| |||| |||| || |||| |||| |||||||||||| |||||||| ||||||| |||||||||  | ||    
T  33561039 gatggagggtagtcaaatcactagaggcagaggaagtcctagaaaaactgtaagggaaactattaagtaagatctagagattagcgagttggatataaat 33560940  T
Q  355 atgatatatgacaaaacattatg 377  Q
    ||| ||||| | | |||||||||    
T  33560939 atggtatatcagagaacattatg 33560917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 1210666 - 1210735
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  1210666 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 1210735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 6427533 - 6427594
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| ||||| ||||||||||| | ||||||| |||||||||||    
T  6427533 cggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 7124287 - 7124376
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    ||||||||||||||||||| |||||||||||  ||||| ||| |||||| || ||||| |||| || | | |||||||||| ||||||||    
T  7124287 aactataagagaaactattgagaaagatctattgattaatgaattggatagaaatatggtataggatagagcattatggtgtcgtttgat 7124376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 9592655 - 9592724
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  9592655 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 9592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 30202491 - 30202422
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  30202491 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 30202422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 37598889 - 37598950
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||||||| |||| ||||||||||  ||||||||| |||||||||||    
T  37598889 cggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 43240742 - 43240673
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||| ||||||  |||||||    
T  43240742 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattatgaatgacgccattaga 43240673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 8391694 - 8391762
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||||||||| |||||||| ||||||||| || |||| |||||||||  ||||||| |||||||    
T  8391694 gagatgaagatgttgtgttggatgagtggtaagactacacaagataggattaggaatgacaccattaga 8391762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 21032275 - 21032335
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| ||| |||||||||| || || |||||||||| |||||||||||||||||||||    
T  21032275 cggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 4001814 - 4001747
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| ||||||||| | |||| ||||||||| |||||||||||||||||  ||||||| |||||||    
T  4001814 agatgaggatgttgcgctagatgagtggtaagactagacaaaataggattaggaatgacaccattaga 4001747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 16822161 - 16822078
Alignment:
Q  295 aaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||| ||||| ||||||||||| |||||||||| || |||||| |||| ||||| | ||||||||||||||   ||||||||||    
T  16822161 aaaaaaactacaagagaaactagtaagaaagatgtagagattaatgagctggatagcgatatgatatatgattgaacattatgg 16822078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 32231317 - 32231246
Alignment:
Q  21 gtagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||| ||||||||| | |||| ||||||||||||||||  |||||||||  ||||||| |||||||    
T  32231317 gtagagatgaggatgttgcgctagatgagtggtaagattagacatgataggattaggaatgacaccattaga 32231246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 46388509 - 46388584
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatata 362  Q
    |||| |||| || |||||||||||||||| ||||||| |||||| |||||  |||||||||| | |||||||||||    
T  46388509 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatata 46388584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 46394953 - 46395028
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatata 362  Q
    |||| |||| || |||||||||||||||| ||||||| |||||| |||||  |||||||||| | |||||||||||    
T  46394953 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatata 46395028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 3819005 - 3818947
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    ||||||||  || |||||||||||||||||||||||||||| || |||||| |||||||    
T  3819005 gaagaccttgaaaaactataagagaaactattaagaaagatttagagattaatgagttg 3818947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 17815612 - 17815714
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgttt 386  Q
    ||||||||| || || |||||||||||||||| |||||||||||  ||||  |||||| ||| || ||||| ||||||| | | |||| ||||| |||||    
T  17815612 gaagacctagaaaaattataagagaaactatttagaaagatctagtgattgatgagttagatagaaatatggtatatgatagagcattttggtgtcgttt 17815711  T
Q  387 gat 389  Q
    |||    
T  17815712 gat 17815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 348
Target Start/End: Complemental strand, 29577324 - 29577230
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||| ||||||   |||||| |||| ||| ||||||||| || ||||| || | |||||||||||||||||||| |||||| |||| |||||    
T  29577324 agatggaagatagtaagatcactagaggtagaggaagacctagaaaaactacaacataaactattaagaaagatctagagattaatgagctggat 29577230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 48431564 - 48431506
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagatt 336  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||||||||| || |||||    
T  48431564 gaggtagaggaagacccaaaaaaactataagagaaactattaagaaagatttagagatt 48431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 52442861 - 52442799
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||| ||||||| |||||||||||||||||| ||||||| ||| ||||| |||||| ||||||    
T  52442861 atgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacatt 52442799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 8671841 - 8671910
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| | |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  8671841 agagataaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 8671910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 25934685 - 25934746
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  ||||||||||| ||| |||||||||| |||||||||||    
T  25934685 cggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 26016358 - 26016399
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagaca 64  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  26016358 agagatgaggatgttgcgttggatgtgtggtaagactagaca 26016399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 41597471 - 41597410
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  ||||||||| | ||| ||||||||||||||||||||||    
T  41597471 cggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 4590876 - 4590816
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||| ||||| ||| ||| ||||||| ||||||||| ||||||||| ||||||    
T  4590876 gatgttgcgttgaatgtgcggtgagactagacaagataggattagaaatgacaatattaga 4590816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Original strand, 40917819 - 40917879
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||| |||||||||||||| ||||| ||||||||||  |||| |||| |||||||||||    
T  40917819 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 49347752 - 49347688
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| ||||    
T  49347752 agatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccatt 49347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 9828115 - 9828174
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| ||||| ||| ||||||  ||||||||| |||||||||||    
T  9828115 gacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 17408762 - 17408821
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| |  ||||| |||||||| | |||||||||||||||||||    
T  17408762 gacacgacacgtgtccgacaccaagatacacctaatctgaagagtgtctgtgcttcatag 17408821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 18190107 - 18190048
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||||| ||||| || |||||||  |||||||| || |||||||||    
T  18190107 gacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 387
Target Start/End: Complemental strand, 43934458 - 43934379
Alignment:
Q  308 gagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttg 387  Q
    |||||||||||||||| |||||||| |||| | |||||||  | ||||||||| |||| | |||||||||| | ||||||    
T  43934458 gagaaactattaagaaggatctacaaattaattagttggaaagggatatgatagatgatagaacattatggcggcgtttg 43934379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 365
Target Start/End: Complemental strand, 6299526 - 6299464
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||||| | |||||||||||||| |||||| |||||| ||| ||  ||||||||||||    
T  6299526 tataagagaaattgttaagaaagatctagagattaatgagtttgatagacgtatgatatatga 6299464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Original strand, 41560353 - 41560423
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| ||||||||||||| || | |||||||||||||||||| || | || || |||||| ||||||||||    
T  41560353 gaggtagaagaagacctagaaaagctataagagaaactattaggatacatttagagattaatgagttggat 41560423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 44008695 - 44008773
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||| |||| ||| ||||||||| || || | |||||||||||||  ||||||||||| |||| | ||||||||||    
T  44008695 aatcactagaggcagaggaagacctagaaaaaatctaagagaaactatcgagaaagatctagagatcaatgagttggat 44008773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 52442686 - 52442616
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| ||| ||||||||| ||||| ||||||||||||||| ||||| |||||| |  ||| ||||||||||    
T  52442686 gaggtagaggaagacctagaacaaatataagagaaactatcaagaaggatctagatgttaatgagttggat 52442616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 4590657 - 4590588
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtg 380  Q
    ||||||||||||||||| || |||||  |||||||||| || ||||||||| ||| | |||| |||||||    
T  4590657 aaactattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaacaatatggtg 4590588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 347
Target Start/End: Complemental strand, 8676999 - 8676954
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||||||||||||| |||||| || |||||| |||||||||    
T  8676999 ctataagagaaactattaaaaaagatttagagattaatgagttgga 8676954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 16822376 - 16822319
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgaca 84  Q
    |||| ||||||| |||||||||||||||| | |||| || ||||||||| ||||||||    
T  16822376 atgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaatgaca 16822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 18337387 - 18337448
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||||||||||||||  |||| | |||| |||  ||||||||| |||||||||||    
T  18337387 cggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 31015095 - 31015156
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| |||| ||||| |||||||||| ||||||  || |||||||||||    
T  31015095 cggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcatag 31015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 31694700 - 31694639
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||| | | ||||| ||| | ||||||||||| ||||||||| |||||||||||    
T  31694700 cggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 32461454 - 32461393
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  |||| |||||||||| ||| |||||| |||||||||||    
T  32461454 cggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 36339985 - 36339912
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    ||||||||||||  |  |||||| |||| ||| ||||||||| || |||||| ||||||||||||| |||||||    
T  36339985 agatggaggatacctagatcactagaggtagaggaagacctagaaaaactatcagagaaactattaggaaagat 36339912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 47989566 - 47989627
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||| |||| |||| ||||| ||||||||||  ||||||||| |||||||||||    
T  47989566 cggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 990594 - 990546
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||| |||||||||||| ||| ||||||| |||||| ||||||||||    
T  990594 aactattagagaaactattgagatagatctagagattaatgagttggat 990546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 1704986 - 1704934
Alignment:
Q  126 acgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||||||||| || || |||||||||| ||||||||||  |||||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcataga 1704934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 7083023 - 7083083
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||| || | |||||||||||||||||||||  || ||| |||||| |||||||||    
T  7083023 gaagacctagaaaagctataagagaaactattaagatggaactagagattaatgagttgga 7083083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 10569203 - 10569131
Alignment:
Q  304 ataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattat 376  Q
    |||| |||||||||||||||||||||| |||||| | || ||||| || ||||  ||||||| | ||||||||    
T  10569203 ataaaagaaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattat 10569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 12135861 - 12135901
Alignment:
Q  308 gagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||||||| ||||| |||||| ||||||||||    
T  12135861 gagaaactattaagaaaaatctagagattaatgagttggat 12135901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 16273171 - 16273115
Alignment:
Q  33 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    ||||||||||||||||||||||||| ||||  | ||  ||||| |||||||||||||    
T  16273171 atgttgcgttggatgtgtggtaagactagatgagatgagattagaaatgacaacatt 16273115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 17831511 - 17831455
Alignment:
Q  128 gtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatagacggaga 184  Q
    |||||||||| ||||| ||||||||||| |||||||||  || |||||||| |||||    
T  17831511 gtgtccgacaccgggacacgcctaatcttaggagtgtccatgtttcatagatggaga 17831455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 30359440 - 30359484
Alignment:
Q  133 cgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  30359440 cgacaacgggacacgccaaatctgaggagtgtccgtgcttcatag 30359484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 40181929 - 40181984
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgctt 172  Q
    |||||||||||||||||| ||| ||||| ||||||||||  ||||||| ||||||||    
T  40181929 cggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg-ctgtgctt 40181984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 43423710 - 43423754
Alignment:
Q  181 gagagacttgggttaacacctatcgtataaaagatggtggaaact 225  Q
    |||||| ||||| |||||||||| ||| |||||||||||||||||    
T  43423710 gagagagttggggtaacacctatagtagaaaagatggtggaaact 43423754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 50771705 - 50771645
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||| || ||||||||| |||||||||||||| || ||| |||||| | |||||||    
T  50771705 gaagacctagaaaaactataagcgaaactattaagaaggacctagagattaataagttgga 50771645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 51584860 - 51584912
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaaga 322  Q
    ||||||| |||| ||  ||||||||| || |||||||||||||||||||||||    
T  51584860 aatcactagaggtaggggaagacctagaaaaactataagagaaactattaaga 51584912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 380
Target Start/End: Complemental strand, 12577042 - 12576916
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||| |||| | |||||| |||| ||| ||||||||| || ||||| |||| |||||||||||||||||||| |||||| ||||||| || || |    
T  12577042 agatggagggtagtcctatcactagaggcagaggaagacctagaaaaactacaagataaactattaagaaagatctagagattaatgagttgaatagaaa 12576943  T
Q  354 tatgatatatgacaaaacattatggtg 380  Q
    |||| ||||||| | | ||||||||||    
T  12576942 tatggtatatgatagaccattatggtg 12576916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 339
Target Start/End: Original strand, 6859481 - 6859566
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagt 339  Q
    ||||||||||||||  || |||| |||| ||| ||||||||| || |||||||||||||||||||| ||||||| |||||||||||    
T  6859481 agatggaggatagtcaaaccactagaggaagaggaagacctagaaaaactataagagaaactattaggaaagatttacagattagt 6859566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 15489674 - 15489602
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||| || ||| |||||||||||||||||||||||    
T  15489674 agatggaggatagttgaatcactagaggcagaggaagacctagaaaaacaataagagaaactattaagaaaga 15489602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 365
Target Start/End: Original strand, 18698910 - 18699005
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||| |||| ||| ||| ||||| || |||||||||||||  ||| |||||||||||| ||||||||||||||||| || ||||| |||||||    
T  18698910 aatcactagaggcagaggaatacctagaaaaactataagagaatgtatcaagaaagatctagagattagtgagttggatagaaatatgttatatga 18699005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 365
Target Start/End: Original strand, 27998574 - 27998652
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||| ||| |  | |||||||||||    
T  27998574 gaagacctagaaaaactataagagaaactactaagaaagatctacagattaatgagttagataggaacatgatatatga 27998652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 2075835 - 2075766
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| || |||||| ||||||| |||||||||  |||||||||||||||    
T  2075835 agagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattaga 2075766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 9234990 - 9235059
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| | ||||||| ||||||||||||||||| |||||   ||||||||||||||||||||||||||    
T  9234990 agagatggaaatgttgcattggatgtgtggtaagactagacgggataggattataaatgacaacattaga 9235059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 10639218 - 10639287
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| |||||| ||||||||||  ||||||| |||||||    
T  10639218 agagatgaggatgttgcgttggatgagtggtaagactagacagaataggattaggaatgacaccattaga 10639287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 5305546 - 5305606
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||||||||||| ||||||| |||| |||| |||| |||||||||||    
T  5305546 gatgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattaga 5305606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 27998344 - 27998391
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaatag 70  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  27998344 agagatgaggatgttgcgttggatgtgtggtaagactagacaaaatag 27998391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 28186906 - 28186851
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    ||||||||||||||||||||||| || |||||| |||||||||| |||||||||||    
T  28186906 taagagaaactattaagaaagatttagagattaatgagttggatagagatatgata 28186851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 7678578 - 7678672
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||||   |||||| |||| ||| ||||| |||  | ||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  7678578 agatggaggatagtcagatcactagaggcagaggaagatctagtaaaaccataagagaaactatttagaaagatctagagattaatgagttggat 7678672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 9917632 - 9917526
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||  ||||||  |||  ||| || |||||| || |||||| |||||||||||| |||||||| || |||| | |||||||||| ||||    
T  9917632 agatggaggatagtcaaatcacaagagacagaggatgacctagaaaaactattagagaaactatttagaaagatatagagatcaatgagttggatagaga 9917533  T
Q  354 tatgata 360  Q
    |||||||    
T  9917532 tatgata 9917526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 1287950 - 1287881
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  1287950 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacatcattaga 1287881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 2713044 - 2713137
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||||||||| |||  ||||||| |||  ||  ||||||||| || |||||||||||||||||||||||| |||||| |||| | |||||||||    
T  2713044 agatggaggagagtcaaatcactagagtcaggggaagacctagaaaaactataagagaaactattaagaaggatctagagatgaatgagttgga 2713137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 28187029 - 28186960
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||||  ||||||| ||||||||||||||||| ||||||   |||||||| ||||||||||||||||    
T  28187029 agagatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacattaga 28186960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 6889093 - 6889185
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    ||||||||||||||  || |||| |||| ||| |||| |||| || |||||||||||||||||||| ||||||| || |||||| | ||||||    
T  6889093 agatggaggatagtcaaaccacttgaggaagaggaaggcctagaaaaactataagagaaactattaggaaagatttagagattaattagttgg 6889185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 7678402 - 7678470
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||||||||||| ||||| |||| |||| |  ||||||||| ||||||||||||||||    
T  7678402 gagatgaggatgttgcgttggatctgtggcaagactagataggataggattagaaatgacaacattaga 7678470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 9235166 - 9235271
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaa 370  Q
    |||||| |||| ||| ||||||||| || |||||  ||||||||||||||||||||| || |||||| |||| ||||| || ||||| | ||||| | ||    
T  9235166 atcactagaggcagaggaagacctagaaaaacta--agagaaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaa 9235263  T
Q  371 cattatgg 378  Q
    ||||||||    
T  9235264 cattatgg 9235271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 16347738 - 16347670
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||||||||||| ||||||||| ||||||| ||| ||||| |||||| | |||||||    
T  16347738 gagatgaggatgttgcgttggatgagtggtaagactagacaatatatgattaaaaatgaaaccattaga 16347670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 32516480 - 32516548
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| ||||||| |||||||||||||||||| ||||||  ||||  ||| ||||||||||||||||    
T  32516480 gagatgatgatgttgtgttggatgtgtggtaagactagacaggatagacttagaaatgacaacattaga 32516548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 14749423 - 14749510
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    |||||||  ||| ||| ||||||||| || |||||||||||||||||| ||||| |||||| ||||||  ||||||||| || |||||    
T  14749423 aatcactaaaggcagaggaagacctagaaaaactataagagaaactatcaagaaggatctagagattaacgagttggatagaaatatg 14749510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 21191057 - 21190998
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    |||||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||    
T  21191057 cggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 378
Target Start/End: Original strand, 38684613 - 38684704
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||| || ||||| |||||||||| |||||||||||||| |||||| | |||||||| || ||||| ||  ||| | ||||||||||    
T  38684613 gaagacctagaaaaactacaagagaaacttttaagaaagatctagagattaattagttggatagaaatatggtacttgatagaacattatgg 38684704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 43475390 - 43475449
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatg 364  Q
    |||||||||||||||||||||||| | |||||| |||||||||| || ||||||| ||||    
T  43475390 taagagaaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatg 43475449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 3775233 - 3775179
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaa 324  Q
    ||||||| |||| ||||||||||||| || |||||||||| ||||||||||||||    
T  3775233 aatcactagaggcagaagaagacctagaaaaactataagataaactattaagaaa 3775179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 6368282 - 6368220
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||| ||||||||||| |||||||||||||| ||||| | |||| |||| |||||||||||||    
T  6368282 atgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaacatt 6368220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 357
Target Start/End: Original strand, 30588580 - 30588650
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||||| || |||||||||||||| | |||||||||||||| |||| | |||||||||| || |||||    
T  30588580 gaagacctagaaaaactataagagaaattgttaagaaagatctagagatgaatgagttggatcgaaatatg 30588650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 32766925 - 32766871
Alignment:
Q  124 acacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||||||||||| | ||||||| ||||||| ||||||||| ||||||||||||    
T  32766925 acacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcataga 32766871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 1275186 - 1275255
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||   ||||||||  ||||||| |||||||    
T  1275186 agagatgaggatgttgcgttggatgagtggtaagactagacatggtaggattaggaatgacaccattaga 1275255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 14873580 - 14873641
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||| ||| ||||| ||||||||||  ||||||||| |||||||||||    
T  14873580 cggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 21952274 - 21952339
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatta 90  Q
    |||||| |||||||||||| ||||||||||||| ||||| | ||| ||||| |||||||| |||||    
T  21952274 agatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaatgacagcatta 21952339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 24178431 - 24178500
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| || |||  |||||||||  ||||||| |||||||    
T  24178431 agagatgaggatgttgcgttggatgagtggtaagactatacatgataggattaagaatgacaccattaga 24178500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 6401567 - 6401627
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| ||||||||| ||||  ||||||||||| ||| |||||||||| ||||||||||    
T  6401567 cggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 14667917 - 14667965
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||||||||    
T  14667917 aactataagagaagctactaagaaagatctagagattaatgagttggat 14667965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 33667568 - 33667628
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||| || |||||||||||||  ||||||||| |||||| |||||| |||||||||    
T  33667568 gaagacctagaaaaactataagagaagttattaagaaggatctagagattaatgagttgga 33667628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 42893420 - 42893480
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||||||||||||||||| | ||| ||||||||| | |||||||||  |||||||||||    
T  42893420 gacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcataga 42893480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 7359442 - 7359339
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||||||||||   |||||| |||| ||| |||  |||| || ||| ||||||||||||||| ||||| ||||| |||||| | |||||||| || |    
T  7359442 agatggaggatagtcatatcactagaggcagaggaaagcctagaaaaaccataagagaaactatttagaaaaatctagagattaataagttggatcgaaa 7359343  T
Q  354 tatg 357  Q
    ||||    
T  7359342 tatg 7359339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 10082893 - 10082834
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||||||| || ||||||||||||||||| ||| || |||||| |||||| |||||||||    
T  10082893 aagacctagaaaaactataagagaaactagtaacaaggatctagagattaatgagttgga 10082834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 28005692 - 28005743
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggattgagatatgatata 362  Q
    |||||||||||||||||||| |||||| |||||| ||| | |||||||||||    
T  28005692 aaactattaagaaagatctagagattaatgagtttgatagggatatgatata 28005743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 39205945 - 39206004
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| ||||||| |||||| |||||||||  ||||| ||||||||||| ||||||||||    
T  39205945 gacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtctatgcttcatag 39206004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 42199509 - 42199596
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||| | ||||||  |||||||| || |||||| ||| |||||||| ||||||||||| | |||| |||||||||| || |||||    
T  42199509 aatcactagggggagagaaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggatagaaatatg 42199596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 11675662 - 11675724
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    ||||||||  || |||||||||||||||||||| || |||| || |||||| |||||||||||    
T  11675662 gaagacctgtaaaaactataagagaaactattaggacagatttagagattaatgagttggatt 11675724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 347
Target Start/End: Complemental strand, 15369944 - 15369886
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| || || |||||||||||||||||||||| ||||| |||| | |||||||||    
T  15369944 agacctagaaaaagtataagagaaactattaagaaaaatctaaagataaatgagttgga 15369886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 29922417 - 29922467
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagatta 337  Q
    ||||| ||| || |||||||||||||||||||||||||||| || ||||||    
T  29922417 gaagatctagaaaaactataagagaaactattaagaaagatttagagatta 29922467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 37918183 - 37918253
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacatta 375  Q
    ||||||||||| || |||||||| || |||||| ||||||||||||| ||||  ||| ||| |||||||||    
T  37918183 taagagaaactgtttagaaagatatagagattaatgagttggattgaaatattgtatttgataaaacatta 37918253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 348
Target Start/End: Original strand, 28015 - 28076
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    ||||||||| || |||||||||||||||||||| ||||||| || || ||| | ||||||||    
T  28015 gaagacctagaaaaactataagagaaactattaggaaagatttagaggttaataagttggat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 11002782 - 11002713
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||||| ||||||||||||||||  |||    |||| |||| ||||||||||||||||    
T  11002782 agagatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacattaga 11002713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 19820376 - 19820327
Alignment:
Q  129 tgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||||| ||||| ||||||||||  ||||||||| ||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcataga 19820327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 21522819 - 21522880
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||| || ||||| |||||||||| || ||||||| |||| ||||||    
T  21522819 cggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 21533385 - 21533446
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||| || ||||| |||||||||| || ||||||| |||| ||||||    
T  21533385 cggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 21576746 - 21576685
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||| ||||  |||| ||||||||||  ||||||||| |||||||||||    
T  21576746 cggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 335
Target Start/End: Complemental strand, 24391154 - 24391089
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagat 335  Q
    ||||||| || | ||| ||||| ||| ||| ||||| |||||||||||||||||||||||| ||||    
T  24391154 aatcactagaagcagatgaagaactagaaccactatgagagaaactattaagaaagatctagagat 24391089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 36838618 - 36838651
Alignment:
Q  145 acgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||||||| |||||||||||||||||||||||    
T  36838618 acgcctaatccaaggagtgtctgtgcttcataga 36838651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 39322191 - 39322154
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  39322191 aaactattaagaaagatctaaagattaatgagttggat 39322154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 42199402 - 42199479
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| | ||||||  |||||||| || |||||| ||| |||||||| ||||||||||| | |||| |||||||||    
T  42199402 aatcactagggggagagaaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttgga 42199479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 43558172 - 43558135
Alignment:
Q  26 gatgaagatgttgcgttggatgtgtggtaagattagac 63  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  43558172 gatgaggatgttgcgttggatgtgtggtaagactagac 43558135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 325
Target Start/End: Complemental strand, 3775316 - 3775276
Alignment:
Q  285 aagaagacctaaaacaactataagagaaactattaagaaag 325  Q
    ||||||||||| || ||||||||||||||||| ||||||||    
T  3775316 aagaagacctagaaaaactataagagaaactactaagaaag 3775276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 21542099 - 21542159
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| |||||||||||||| ||||| ||||| |||| ||||| |||| |||| |||||    
T  21542099 cggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 28676719 - 28676767
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    |||| ||||||||||||| || ||||||||||||||| |||| ||||||    
T  28676719 gaggtagaagaagacctataaaaactataagagaaacaattatgaaaga 28676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 34194848 - 34194788
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||||||||||| | ||||||  ||||||||| |||||  |||||||||    
T  34194848 gatgttgtgttggatgtgtggtaaaactagacaggataggattagaaatgtaaacattaga 34194788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  125 cacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||| ||| ||||| ||||||||||  ||||||||| |||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 38464361 - 38464313
Alignment:
Q  129 tgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||||| ||||| || |||||||  |||||||||||||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 365
Target Start/End: Original strand, 43308696 - 43308773
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    |||||||| || ||||| ||||||||||||||||||| ||||| |||||| | |||||||| ||||||||||||||||    
T  43308696 aagacctagaaaaactacaagagaaactattaagaaaaatctagagattaatcagttggatagagatatgatatatga 43308773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 300 - 365
Target Start/End: Complemental strand, 46431815 - 46431750
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||| ||||||||    
T  46431815 aactataagagaaactattaaaaaagatctagagattaatgagttggatagagatattatatatga 46431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 29475792 - 29475888
Alignment:
Q  258 ggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatat 356  Q
    |||||||||||  |||||| |||| ||| ||||||||| || | ||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||||    
T  29475792 ggaggatagttggatcactagaggcagaggaagacctagaaaagctataaga--aactattaagaaagatctagagattaatgagttggattgaaatat 29475888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 378
Target Start/End: Complemental strand, 37598341 - 37598228
Alignment:
Q  264 tagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatat 363  Q
    ||||| ||||||  |||| |||||| |||||| || |||| |||||||||||||||||| | ||||| |||||| |||||||||| | | ||||||||||    
T  37598341 tagttaaatcaccagaggcagaagatgacctagaaaaact-taagagaaactattaagatatatctagagattaatgagttggataggggtatgatatat 37598243  T
Q  364 gacaaaacattatgg 378  Q
    || | ||||||||||    
T  37598242 gatagaacattatgg 37598228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 304 - 378
Target Start/End: Original strand, 49841766 - 49841840
Alignment:
Q  304 ataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| || ||||| ||||||| | ||||||||||    
T  49841766 ataagagaaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattatgg 49841840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 378
Target Start/End: Complemental strand, 23534752 - 23534628
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgaga 353  Q
    ||||||| |||||||  |||||| |||| ||| ||||||| |||| || ||||| ||||||||||| ||||||  || |||||| ||||||||| ||  |    
T  23534752 agatggatgatagttagatcactagaggtagaggaagacccaaaaaaattataacagaaactattaggaaagacttagagattaatgagttggactgtaa 23534653  T
Q  354 tatgatatatgacaaaacattatgg 378  Q
    |||||| ||||| | ||||||||||    
T  23534652 tatgatttatgatagaacattatgg 23534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 55244429 - 55244513
Alignment:
Q  305 taagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    ||||||||| | |||||||| ||||| |||||| |||||||||| || ||||| ||||||| | |||||||||||| ||||||||    
T  55244429 taagagaaattcttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaacattatggtgtcgtttgat 55244513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 11581576 - 11581635
Alignment:
Q  286 agaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    |||||||||| || ||||||||||||||||||||||||||||||| |||| | |||||||    
T  11581576 agaagacctagaaaaactataagagaaactattaagaaagatctatagataaatgagttg 11581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 36820122 - 36820067
Alignment:
Q  291 acctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgg 346  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  36820122 acctagaaaaactataagagaaactattaagaaagatctagagattaatgagttgg 36820067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 378
Target Start/End: Complemental strand, 2340853 - 2340775
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||||||||||||||||||||||| |||||| ||||| |||  | |  ||||||||||| | ||||||||||    
T  2340853 aactataagagaaactattaagaaagatctagagattaatgagtcggagagggtaatgatatatgatagaacattatgg 2340775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 36820309 - 36820251
Alignment:
Q  34 tgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||||||||| ||||| | ||||||||| ||||||| ||||||||    
T  36820309 tgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattaga 36820251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 39600839 - 39600769
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||| ||| ||||||||| || |||||||||||||||||||||||||||| || || ||| ||||||||||    
T  39600839 gaggtagaggaagacctagaaaaactataagagaaactattaagaaagatttagaggttaatgagttggat 39600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 11252036 - 11252097
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatagac 179  Q
    ||||||||||||||||| || ||| | ||||||||||  |||||||||||||||||||||||    
T  11252036 gacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatagac 11252097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 40982029 - 40982102
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgata 360  Q
    ||||||||| || ||||||||||| ||||||||||||||||||| | |||| || ||||||| || ||||||||    
T  40982029 gaagacctagaaaaactataagagtaactattaagaaagatctagatattaatgtgttggatagatatatgata 40982102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 51448070 - 51448001
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  51448070 agagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattaga 51448001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 52138721 - 52138790
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||| ||||||||| ||||||  |||||||||  ||||||| |||||||    
T  52138721 agagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattaga 52138790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 2341074 - 2341006
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    ||||||| |||||||| ||||||||||||||||| ||||||  |||| |||| |||||| |||||||||    
T  2341074 gagatgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattaga 2341006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 391
Target Start/End: Complemental strand, 34719229 - 34719125
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgttt 386  Q
    ||||||||| || |||||||| ||||||||||| || | ||||| | |||| ||| ||||||||||||| ||||||||| | | ||||||||   |||||    
T  34719229 gaagacctagaaaaactataaaagaaactattaggacaaatctagaaattaatgatttggattgagatacgatatatgatagagcattatggcttcgttt 34719130  T
Q  387 gattc 391  Q
    |||||    
T  34719129 gattc 34719125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 11610578 - 11610629
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcataga 11610629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 21200664 - 21200751
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatg 357  Q
    ||||||| | |||||| ||||||||| || |||||| ||| |||||||| ||||||||||| | |||| |||||||||| || |||||    
T  21200664 aatcactagggggagaggaagacctagaaaaactattagacaaactatttagaaagatctagatattaatgagttggatagaaatatg 21200751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 37227853 - 37227920
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||| |||| ||||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||    
T  37227853 agataaagacgttgtgttggttgtgtggtaagactagacaatataggattagaaatgaccacattaga 37227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 362
Target Start/End: Complemental strand, 44443353 - 44443278
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatata 362  Q
    |||| |||| || |||||||||||||||| ||||||| |||||| |||||  |||||||||| | |||||||||||    
T  44443353 gaaggcctagaaaaactataagagaaacttttaagaatgatctagagattgatgagttggatagggatatgatata 44443278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 377
Target Start/End: Complemental strand, 46367537 - 46367446
Alignment:
Q  287 gaagacctaaaacaactataagagaaactatt-aagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatg 377  Q
    |||||||||||| || |||||||||||||||| || ||| ||||| |||| | ||||||||||   |||||||||||||| | |||||||||    
T  46367537 gaagacctaaaaaaattataagagaaactattaaaaaaaaatctagagatgaatgagttggataaggatatgatatatgatagaacattatg 46367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 16000017 - 15999951
Alignment:
Q  110 cggatacggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    |||| ||| |||| |||||||||||||| ||||| |||||||||| |||||||||| |||| |||||    
T  16000017 cggacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 45728067 - 45728133
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacatt 89  Q
    |||||||| ||||||||| |||||| |||||||||  |||| ||||||||||| |||||||| ||||    
T  45728067 agagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaatgacatcatt 45728133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 47788815 - 47788881
Alignment:
Q  22 tagagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacat 88  Q
    ||||||||| ||||||||||| |||||| ||||| | |||||| |||| || |||||||||||||||    
T  47788815 tagagatgaggatgttgcgttagatgtgcggtaaaactagacataatatgaatataaatgacaacat 47788881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 7171559 - 7171620
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| || || |||||||||| ||||||||| | ||||||||||    
T  7171559 cggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatag 7171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 14209182 - 14209243
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||| ||||| |||||||| ||||||| ||| |||||| |||||||||||    
T  14209182 cggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 31261108 - 31261051
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagat 327  Q
    ||||||| |||| ||| ||||||||| || |||||||||||||||||| |||||||||    
T  31261108 aatcactagaggcagaggaagacctagaaaaactataagagaaactatcaagaaagat 31261051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 389
Target Start/End: Original strand, 37228184 - 37228317
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagata 355  Q
    ||||||| ||||  ||||||| |||| |||  |||||||| || ||| ||||| |||||||||||||||||  || | ||||  |||||||||  |||||    
T  37228184 atggagggtagtcaaatcactagaggcagagaaagacctataaaaacgataagggaaactattaagaaagacttagaaattaacgagttggataaagata 37228283  T
Q  356 tgatatatgacaaaacattatggtgccgtttgat 389  Q
    ||||| |||  | |||||||||| | ||||||||    
T  37228284 tgataaatggtagaacattatggcgtcgtttgat 37228317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 46568037 - 46568106
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||| |||||||||||| ||||| ||||| | || | |||| ||||||||||||||||    
T  46568037 agagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattagaaatgacaacattaga 46568106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 54278941 - 54279010
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| |||||||||||||||  ||||||||| ||||||| |||| ||||  ||||||| |||||||    
T  54278941 agagatgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccattaga 54279010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 55401133 - 55401194
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| |||||||||||||| || || ||||||||||  ||||||||| |||||||||||    
T  55401133 cggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 347
Target Start/End: Complemental strand, 40116617 - 40116557
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||| || |||||||||||||||||||| || |||| || |||||| |||||||||    
T  40116617 gaagacctagaaaaactataagagaaactattaggatagatttagagattaatgagttgga 40116557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 41452876 - 41452828
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||  |||||||||||||||||||| |||||| ||||||||||    
T  41452876 aactataagttaaactattaagaaagatctagagattaatgagttggat 41452828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 44134007 - 44133938
Alignment:
Q  271 atcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgag 342  Q
    ||||||||||| ||| ||| ||||||||  | |||||||||||||||||||| ||||||| |||||| ||||    
T  44134007 atcactggaggcagatgaaaacctaaaa--attataagagaaactattaagatagatctaaagattaatgag 44133938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 45236786 - 45236846
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||||||||||| |||||   ||| ||||| |||||||| |||||||    
T  45236786 gatgttgcgttggatgtgtggtaagactagactggatatgattagaaatgacaccattaga 45236846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 45289227 - 45289179
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||||| ||||||| || |||||| ||||||||||    
T  45289227 aactataagagaaactattaggaaagatttagagattaatgagttggat 45289179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 389
Target Start/End: Complemental strand, 21427715 - 21427631
Alignment:
Q  303 tataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttgat 389  Q
    |||||||||||||||||||||||| ||| ||||   |||||||||| ||||| |||| ||||||||  |||| ||| | ||||||||    
T  21427715 tataagagaaactattaagaaagacctagagat--atgagttggatagagatttgatttatgacaaggcattgtggcgtcgtttgat 21427631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 27505311 - 27505370
Alignment:
Q  118 gacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| |||||||||||||| ||||| | ||||||||  ||||||||| |||||||||||    
T  27505311 gacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 347
Target Start/End: Original strand, 27893207 - 27893282
Alignment:
Q  272 tcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||| |||| ||| ||||||||| ||  |||||||||||||||||||| || || ||| |||||| |||||||||    
T  27893207 tcacttgaggtagaggaagacctagaaagactataagagaaactattaaaaaggacctagagattaatgagttgga 27893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 47233955 - 47233888
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| ||| |||||||||||| ||||||||| ||||||  ||| ||||| |||||||| |||||||    
T  47233955 agatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattaga 47233888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 2408640 - 2408590
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||| ||||| ||||| |||||||||||||||||| || |||||||||||    
T  2408640 cgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 4987280 - 4987222
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    |||||| |||||||||||||| ||||| ||||||||||  ||||||||| || ||||||    
T  4987280 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 365
Target Start/End: Complemental strand, 8476161 - 8476083
Alignment:
Q  287 gaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatga 365  Q
    ||||| |||||| ||||| ||  |||||| |||||||||||||| |||||| | | |||||| |||||||| |||||||    
T  8476161 gaagatctaaaaaaactagaaaggaaacttttaagaaagatctaaagattaataatttggatagagatatggtatatga 8476083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 348
Target Start/End: Complemental strand, 19162721 - 19162675
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||| ||||||| || |||||| ||||||||||    
T  19162721 ctataagagaaactattaggaaagatttagagattaatgagttggat 19162675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 28918062 - 28918120
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcat 175  Q
    |||||| ||||||||||||||  |||| |||||||||| ||||||||||  ||||||||    
T  28918062 ggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 378
Target Start/End: Complemental strand, 47804791 - 47804721
Alignment:
Q  308 gagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||| |||||||||||| || |||||| ||||||| || |||| ||| ||||||| | ||||||||||    
T  47804791 gagaaacgattaagaaagatttagagattaatgagttgaatagagacatgctatatgatagaacattatgg 47804721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 49841534 - 49841600
Alignment:
Q  25 agatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattag 91  Q
    |||||| ||||||| ||||||||||| |||||| ||||| |  || ||||| |||||||||||||||    
T  49841534 agatgaggatgttgtgttggatgtgtagtaagactagacgaggtaagattagaaatgacaacattag 49841600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 348
Target Start/End: Complemental strand, 50960795 - 50960725
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||| ||||||||| || || | ||||||||||||||| ||||| | || |||||| ||||||||||    
T  50960795 gagggagaggaagacctagaaaaaatttaagagaaactattaggaaaggtttagagattaatgagttggat 50960725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 15796284 - 15796223
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||| ||| ||| | |||||||||| || ||||||  |||||||||||    
T  15796284 cggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 357
Target Start/End: Complemental strand, 20262511 - 20262410
Alignment:
Q  256 atggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagata 355  Q
    ||||| ||||||  || |||| |||| ||| ||||||| | || |||||||||| || |||| |||||||||||| |||| | |||||||| | ||||||    
T  20262511 atggatgatagtcaaagcactagaggcagaggaagaccaataaaaactataagataatctatcaagaaagatctagagatcaatgagttgggtagagata 20262412  T
Q  356 tg 357  Q
    ||    
T  20262411 tg 20262410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 20503524 - 20503585
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||| |||| |||| |||| ||||| ||||||||||  ||||||||| ||||||||||||    
T  20503524 ggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcataga 20503585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 26990329 - 26990406
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| |||| ||  ||||||||| || |||||| ||||||||||| ||||| |||||| |||| | |||||||||    
T  26990329 aatcactcgaggtaggggaagacctagaaaaactattagagaaactatcaagaaggatctagagatcaatgagttgga 26990406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 29919226 - 29919283
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatg 81  Q
    ||||||| ||||||| ||||||||||||||| |||||||| | ||| ||||| |||||    
T  29919226 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaatg 29919283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 29928642 - 29928585
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatg 81  Q
    ||||||| ||||||| ||||||||||||||| |||||||| | ||| ||||| |||||    
T  29928642 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaatg 29928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 29968379 - 29968436
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatg 81  Q
    ||||||| ||||||| ||||||||||||||| |||||||| | ||| ||||| |||||    
T  29968379 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaatg 29968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 29977796 - 29977739
Alignment:
Q  24 gagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatg 81  Q
    ||||||| ||||||| ||||||||||||||| |||||||| | ||| ||||| |||||    
T  29977796 gagatgacgatgttgtgttggatgtgtggtacgattagacgagatatgattagaaatg 29977739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 345
Target Start/End: Original strand, 33307260 - 33307305
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    ||||||||| ||||| ||||||||||||||| |||||| |||||||    
T  33307260 aactataagggaaaccattaagaaagatctagagattaatgagttg 33307305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 347
Target Start/End: Complemental strand, 33755524 - 33755431
Alignment:
Q  254 agatggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||||||| ||   |||||| |||| ||| ||| ||||| || |||||||||||||||||||| |||| |  || |||||| |||||||||    
T  33755524 agatggaggatggtcggatcactagaggcagaggaaaacctagaaaaactataagagaaactattaggaaaaacttagagattaatgagttgga 33755431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 34185101 - 34185052
Alignment:
Q  128 gtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||| ||||| ||||||||||  ||||||||| |||||||||||    
T  34185101 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 36304123 - 36304160
Alignment:
Q  311 aaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  36304123 aaactattaagaaagatctagagattaatgagttggat 36304160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 37228062 - 37228163
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatggtgccgtttg 387  Q
    |||||||| || ||| ||||| |||||||||||||||||  || | |||| |||||| |||  |||||||||| |||  | |||||||||| | ||||||    
T  37228062 aagacctataaaaacgataagggaaactattaagaaagacttagaaattaatgagttagataaagatatgataaatggtagaacattatggcgtcgtttg 37228161  T
Q  388 at 389  Q
    ||    
T  37228162 at 37228163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 37351523 - 37351600
Alignment:
Q  270 aatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    ||||||| |||| ||  ||||||||| || |||||| |||||||| || |||||||||||| |||||| |||| ||||    
T  37351523 aatcactagaggtaggggaagacctagaaaaactattagagaaacaatcaagaaagatctagagattaatgagatgga 37351600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 41961640 - 41961579
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||||||  |||| ||||||||||  || |||||| |||||||||||    
T  41961640 cggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 46432023 - 46431962
Alignment:
Q  32 gatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattagat 93  Q
    |||||||| ||||||||||||||||| ||||||  ||||| ||| ||||||| |||| ||||    
T  46432023 gatgttgcattggatgtgtggtaagactagacaggatagggttagaaatgactacatcagat 46431962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 47542073 - 47542032
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagaca 64  Q
    |||||||| |||||||||||||||| ||||||||| ||||||    
T  47542073 agagatgaggatgttgcgttggatgagtggtaagactagaca 47542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 53519511 - 53519576
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| |||||||||||||||| ||||||| | ||||||  |||||||||  ||||||| |||||||    
T  53519511 atgaggatgttgcgttggatgagtggtaatactagacaggataggattaagaatgacaccattaga 53519576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 54128299 - 54128368
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||| ||||||||||| |||| ||||||| | |||||   |||||||||| ||||||| |||||||    
T  54128299 agagatgaggatgttgcgtttgatgagtggtaaaactagacgcgataggattatgaatgacaccattaga 54128368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 42026670 - 42026594
Alignment:
Q  302 ctataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    |||||||||||||||||||||  ||| ||  ||||| |||||| ||| || ||||| ||||||| | ||||||||||    
T  42026670 ctataagagaaactattaagattgatatagggattaatgagttagatagaaatatggtatatgatagaacattatgg 42026594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 48657471 - 48657419
Alignment:
Q  293 ctaaaacaactataagagaaactattaagaaagatctacagattagtgagttg 345  Q
    |||||| || ||||||| |||||||||||||| ||||| |||||| |||||||    
T  48657471 ctaaaaaaattataagaaaaactattaagaaaaatctatagattaatgagttg 48657419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 300 - 348
Target Start/End: Original strand, 49042082 - 49042130
Alignment:
Q  300 aactataagagaaactattaagaaagatctacagattagtgagttggat 348  Q
    |||||||||||||||||||| ||||||| || || ||| ||||||||||    
T  49042082 aactataagagaaactattaggaaagatttagaggttaatgagttggat 49042130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 54365133 - 54365085
Alignment:
Q  278 gagggagaagaagacctaaaacaactataagagaaactattaagaaaga 326  Q
    |||| ||| ||||||||| || |||||||||||||||||||| ||||||    
T  54365133 gaggcagaggaagacctagaaaaactataagagaaactattaggaaaga 54365085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 257 - 360
Target Start/End: Original strand, 11900 - 12002
Alignment:
Q  257 tggaggatagttcaatcactggagggagaagaagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggattgagatat 356  Q
    |||||| ||||  ||||||| |||| | ||||||| ||| || |||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||     
T  11900 tggagggtagtgaaatcactagaggcaaaagaagaactagaaaaactataagagaaactattaagaaggatctagagattaatgag-tggattgagatac 11998  T
Q  357 gata 360  Q
    ||||    
T  11999 gata 12002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 347
Target Start/End: Complemental strand, 178568 - 178509
Alignment:
Q  288 aagacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttgga 347  Q
    |||||||| || |||||||||||||||||||||||||||| || |||||| |||||||||    
T  178568 aagacctagaaaaactataagagaaactattaagaaagatatagagattaatgagttgga 178509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 31389 - 31458
Alignment:
Q  23 agagatgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||| | |||||||||||||||| ||||||||| ||||||  ||| |||||  ||||||| |||||||    
T  31389 agagattaggatgttgcgttggatgagtggtaagactagacaggataagattaggaatgacaccattaga 31458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  119 acacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||| ||||||||||||||  ||||||||||||||| |||||||||| |||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 378
Target Start/End: Complemental strand, 2436 - 2359
Alignment:
Q  301 actataagagaaactattaagaaagatctacagattagtgagttggattgagatatgatatatgacaaaacattatgg 378  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| ||| || ||||| ||||| | | ||||||||||    
T  2436 actataagagagactattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaacattatgg 2359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 4629 - 4564
Alignment:
Q  27 atgaagatgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||| ||||||||||||||||  |||||||| ||||||  |||||||||||||||||| |||||||    
T  4629 atgaggatgttgcgttggatgaatggtaagactagacatgataggattataaatgacaccattaga 4564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 71794 - 71855
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||||||||||||||||||| ||||| ||| ||||||  ||||||||| |||||||||||    
T  71794 cggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 14585 - 14647
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| |||||||||||||| || || |||||||||| |||||||||  ||||||||||||    
T  14585 cggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcataga 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 8856 - 8918
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| |||||||||||||| || || ||||||||||| |||||| || ||||||||||||    
T  8856 cggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcataga 8918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 241663 - 241725
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    ||||||| |||||||||||||| ||||| ||||||||||  || |||||| ||||||||||||    
T  241663 cggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcataga 241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 236964 - 236914
Alignment:
Q  127 cgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    |||||| |||| ||||| || |||||||| |||||||||||||||||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 347308 - 347252
Alignment:
Q  36 ttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaacattaga 92  Q
    |||||||||||||||||| ||| ||||    ||||||| ||||||||||||||||||    
T  347308 ttgcgttggatgtgtggtgagagtagatgggataggataataaatgacaacattaga 347252  T

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Target: scaffold0512 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 5037 - 4976
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcatag 177  Q
    ||||||| ||||||||||||||  | || | ||||||||  |||||||||||||||||||||    
T  5037 cggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 44514 - 44453
Alignment:
Q  117 ggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcataga 178  Q
    |||||||||||||||||||||  |||| | |  |||||| || |||||||||||||||||||    
T  44514 ggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgcttcataga 44453  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 463 - 403
Alignment:
Q  116 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtctgtgcttcata 176  Q
    ||||||| || ||||||||||| ||||| || |||||||  ||||||||| ||||||||||    
T  463 cggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 3974 - 3915
Alignment:
Q  289 agacctaaaacaactataagagaaactattaagaaagatctacagattagtgagttggatt 349  Q
    |||||||||| ||||||||||||||||||| ||||| |||   |||||| |||||||||||    
T  3974 agacctaaaa-aactataagagaaactatttagaaaaatcattagattaatgagttggatt 3915  T

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