View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7645_low_1 (Length: 938)

Name: NF7645_low_1
Description: NF7645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7645_low_1
NF7645_low_1
[»] chr5 (72 HSPs)
chr5 (162-265)||(2873521-2873624)
chr5 (21-266)||(8637768-8638007)
chr5 (128-309)||(8678722-8678903)
chr5 (128-309)||(8645214-8645395)
chr5 (162-259)||(9004389-9004486)
chr5 (28-247)||(2844093-2844306)
chr5 (28-247)||(2855926-2856139)
chr5 (158-264)||(8547123-8547229)
chr5 (812-886)||(13210512-13210586)
chr5 (162-259)||(9073723-9073820)
chr5 (21-259)||(1599291-1599523)
chr5 (814-888)||(9066090-9066165)
chr5 (814-888)||(27309482-27309556)
chr5 (818-888)||(37106569-37106639)
chr5 (162-247)||(2904045-2904130)
chr5 (815-888)||(4621735-4621808)
chr5 (815-888)||(6245802-6245875)
chr5 (815-888)||(37274261-37274334)
chr5 (815-888)||(38768841-38768914)
chr5 (818-886)||(18979019-18979087)
chr5 (812-888)||(43548054-43548130)
chr5 (814-888)||(4155747-4155822)
chr5 (21-100)||(8529820-8529899)
chr5 (814-880)||(25085409-25085476)
chr5 (814-880)||(25143381-25143448)
chr5 (825-888)||(40739721-40739784)
chr5 (818-885)||(42436797-42436864)
chr5 (814-888)||(43293286-43293361)
chr5 (815-885)||(31499379-31499449)
chr5 (818-888)||(37341394-37341463)
chr5 (815-888)||(10665625-10665698)
chr5 (815-888)||(31485213-31485286)
chr5 (815-888)||(41881342-41881415)
chr5 (818-889)||(4155756-4155828)
chr5 (21-97)||(9073879-9073955)
chr5 (814-888)||(13145485-13145560)
chr5 (814-888)||(19034324-19034399)
chr5 (814-888)||(37866282-37866357)
chr5 (818-889)||(38760006-38760077)
chr5 (826-888)||(8233132-8233194)
chr5 (818-879)||(43293295-43293357)
chr5 (166-259)||(8536523-8536616)
chr5 (815-888)||(15272167-15272240)
chr5 (815-888)||(18522554-18522627)
chr5 (818-874)||(37866291-37866348)
chr5 (28-100)||(2873680-2873752)
chr5 (818-889)||(9066084-9066156)
chr5 (818-889)||(13145494-13145566)
chr5 (818-889)||(19034333-19034405)
chr5 (811-888)||(19351662-19351741)
chr5 (818-889)||(25085403-25085475)
chr5 (818-889)||(25143375-25143447)
chr5 (21-88)||(8536384-8536451)
chr5 (158-264)||(8529945-8530051)
chr5 (842-888)||(10552764-10552810)
chr5 (812-882)||(31484889-31484959)
chr5 (815-888)||(7339362-7339435)
chr5 (812-872)||(6245477-6245537)
chr5 (818-854)||(6245781-6245817)
chr5 (814-854)||(10665683-10665723)
chr5 (812-872)||(18864866-18864926)
chr5 (814-885)||(36294473-36294546)
chr5 (21-88)||(8645113-8645180)
chr5 (818-857)||(12188813-12188852)
chr5 (814-888)||(38759997-38760071)
chr5 (810-872)||(10665896-10665958)
chr5 (814-880)||(18978590-18978656)
chr5 (818-879)||(35318943-35319005)
chr5 (812-854)||(36294447-36294489)
chr5 (812-882)||(41881646-41881716)
chr5 (814-872)||(43548471-43548529)
chr5 (812-865)||(42437117-42437170)
[»] scaffold0627 (1 HSPs)
scaffold0627 (21-253)||(5498-5724)
[»] chr7 (58 HSPs)
chr7 (818-888)||(10594581-10594651)
chr7 (814-888)||(46924309-46924384)
chr7 (158-264)||(48360839-48360945)
chr7 (815-888)||(7883418-7883491)
chr7 (815-888)||(12429389-12429462)
chr7 (815-888)||(25226010-25226083)
chr7 (815-888)||(40862950-40863023)
chr7 (815-888)||(43776860-43776933)
chr7 (815-888)||(47010887-47010960)
chr7 (815-888)||(48613401-48613474)
chr7 (814-888)||(8215266-8215341)
chr7 (814-888)||(21278606-21278681)
chr7 (825-888)||(29042469-29042532)
chr7 (158-309)||(35780855-35781006)
chr7 (815-886)||(36688240-36688311)
chr7 (814-888)||(43246580-43246655)
chr7 (815-886)||(43501742-43501813)
chr7 (814-888)||(47065488-47065563)
chr7 (816-886)||(42435956-42436026)
chr7 (814-888)||(48873974-48874048)
chr7 (815-888)||(12846972-12847045)
chr7 (815-888)||(40305118-40305191)
chr7 (815-888)||(44709517-44709590)
chr7 (815-888)||(45869812-45869885)
chr7 (815-888)||(46102267-46102340)
chr7 (818-889)||(8215275-8215347)
chr7 (818-889)||(21278615-21278687)
chr7 (818-889)||(26015448-26015520)
chr7 (818-889)||(35924531-35924603)
chr7 (825-888)||(19474771-19474834)
chr7 (814-880)||(26015447-26015514)
chr7 (815-886)||(39597270-39597341)
chr7 (825-888)||(47540876-47540939)
chr7 (29-100)||(48360996-48361067)
chr7 (823-888)||(32541733-32541799)
chr7 (815-888)||(35924538-35924612)
chr7 (815-888)||(20493266-20493339)
chr7 (818-874)||(32541742-32541799)
chr7 (818-889)||(40995588-40995660)
chr7 (818-889)||(46924303-46924375)
chr7 (818-888)||(40995598-40995669)
chr7 (814-859)||(21874139-21874185)
chr7 (815-877)||(24981421-24981483)
chr7 (791-872)||(43776506-43776585)
chr7 (812-880)||(7883499-7883567)
chr7 (814-854)||(25225985-25226025)
chr7 (814-888)||(25877212-25877285)
chr7 (837-889)||(32661966-32662018)
chr7 (818-889)||(43246589-43246661)
chr7 (818-889)||(47065497-47065569)
chr7 (815-878)||(41469783-41469846)
chr7 (814-888)||(42095104-42095179)
chr7 (729-767)||(25066608-25066646)
chr7 (847-888)||(7900907-7900948)
chr7 (823-872)||(21202623-21202672)
chr7 (818-889)||(25877206-25877276)
chr7 (847-888)||(46321661-46321702)
chr7 (798-854)||(48613362-48613416)
[»] chr4 (69 HSPs)
chr4 (818-888)||(22847527-22847597)
chr4 (812-886)||(42131215-42131289)
chr4 (815-888)||(3027020-3027093)
chr4 (815-888)||(40430818-40430891)
chr4 (21-100)||(9443981-9444060)
chr4 (818-888)||(34159908-34159978)
chr4 (814-888)||(50469574-50469648)
chr4 (815-888)||(3025819-3025892)
chr4 (815-888)||(10480828-10480901)
chr4 (815-888)||(11691404-11691477)
chr4 (815-888)||(13961887-13961960)
chr4 (815-888)||(24035040-24035113)
chr4 (815-888)||(32933200-32933273)
chr4 (815-888)||(35339144-35339217)
chr4 (815-888)||(37829445-37829518)
chr4 (815-888)||(43621160-43621233)
chr4 (815-888)||(48990957-48991030)
chr4 (812-888)||(36852242-36852318)
chr4 (814-888)||(19873688-19873763)
chr4 (814-888)||(20434519-20434594)
chr4 (818-888)||(28406054-28406125)
chr4 (814-888)||(42349107-42349182)
chr4 (814-888)||(42723747-42723822)
chr4 (814-888)||(53874651-53874726)
chr4 (814-888)||(55183133-55183208)
chr4 (818-888)||(24897378-24897448)
chr4 (815-888)||(1523373-1523446)
chr4 (815-888)||(20292828-20292901)
chr4 (815-888)||(22301275-22301348)
chr4 (815-888)||(30215310-30215383)
chr4 (815-888)||(47429242-47429315)
chr4 (827-888)||(47466962-47467023)
chr4 (815-888)||(50561901-50561974)
chr4 (818-874)||(51323072-51323129)
chr4 (818-889)||(20434513-20434585)
chr4 (818-889)||(53874660-53874732)
chr4 (814-888)||(614280-614354)
chr4 (814-888)||(55220274-55220349)
chr4 (815-885)||(7318708-7318778)
chr4 (818-879)||(42349111-42349173)
chr4 (783-886)||(7794767-7794869)
chr4 (815-888)||(8713682-8713755)
chr4 (815-888)||(32135946-32136019)
chr4 (818-889)||(28406063-28406135)
chr4 (818-854)||(35339202-35339238)
chr4 (791-889)||(51323040-51323139)
chr4 (814-888)||(55215209-55215284)
chr4 (836-886)||(37682801-37682851)
chr4 (837-887)||(41201862-41201912)
chr4 (842-888)||(48348877-48348923)
chr4 (812-870)||(48348985-48349043)
chr4 (818-874)||(42723756-42723813)
chr4 (818-889)||(614274-614345)
chr4 (818-889)||(55183142-55183214)
chr4 (818-889)||(55220268-55220340)
chr4 (823-870)||(11691090-11691137)
chr4 (818-888)||(19873697-19873768)
chr4 (818-880)||(24897377-24897439)
chr4 (812-875)||(47467029-47467092)
chr4 (158-264)||(9444106-9444212)
chr4 (814-889)||(25858041-25858114)
chr4 (814-889)||(25858047-25858120)
chr4 (822-872)||(50601953-50602003)
chr4 (840-885)||(3020164-3020209)
chr4 (839-880)||(7818123-7818164)
chr4 (818-874)||(15659038-15659095)
chr4 (847-888)||(20738188-20738229)
chr4 (815-872)||(51322013-51322070)
chr4 (818-870)||(55215218-55215271)
[»] chr3 (52 HSPs)
chr3 (818-888)||(2612757-2612827)
chr3 (815-888)||(48585200-48585273)
chr3 (812-888)||(31608039-31608115)
chr3 (814-888)||(10840998-10841073)
chr3 (814-888)||(38871532-38871607)
chr3 (814-888)||(30419255-30419329)
chr3 (818-888)||(44353828-44353898)
chr3 (815-888)||(7680661-7680734)
chr3 (815-888)||(38144673-38144746)
chr3 (815-888)||(52813522-52813595)
chr3 (814-886)||(33392974-33393046)
chr3 (814-888)||(4044381-4044456)
chr3 (814-888)||(7149572-7149647)
chr3 (825-888)||(24200068-24200131)
chr3 (814-888)||(36430723-36430798)
chr3 (814-888)||(37971279-37971354)
chr3 (814-888)||(41070291-41070366)
chr3 (815-888)||(4515610-4515684)
chr3 (815-881)||(11124449-11124515)
chr3 (833-886)||(18168135-18168188)
chr3 (815-888)||(35155210-35155283)
chr3 (815-888)||(35233174-35233247)
chr3 (815-888)||(41589267-41589340)
chr3 (815-888)||(49779304-49779377)
chr3 (818-889)||(4044390-4044462)
chr3 (818-889)||(4515619-4515691)
chr3 (814-888)||(33712288-33712364)
chr3 (818-889)||(36430717-36430789)
chr3 (818-889)||(37971288-37971360)
chr3 (818-889)||(41070285-41070357)
chr3 (814-888)||(7153171-7153246)
chr3 (814-888)||(10999357-10999432)
chr3 (815-886)||(36840158-36840229)
chr3 (815-885)||(19942154-19942224)
chr3 (818-889)||(10841007-10841079)
chr3 (818-889)||(10999366-10999438)
chr3 (818-889)||(38871526-38871598)
chr3 (812-888)||(47097819-47097895)
chr3 (814-888)||(53974689-53974764)
chr3 (843-888)||(20656859-20656904)
chr3 (843-888)||(32236737-32236782)
chr3 (818-889)||(33712297-33712370)
chr3 (818-870)||(53974702-53974755)
chr3 (818-889)||(7149581-7149653)
chr3 (812-872)||(36232356-36232416)
chr3 (812-872)||(38144987-38145047)
chr3 (842-889)||(10999441-10999488)
chr3 (810-872)||(2613069-2613131)
chr3 (814-880)||(36840997-36841063)
chr3 (812-854)||(41589240-41589282)
chr3 (847-888)||(22781414-22781455)
chr3 (838-879)||(39626454-39626495)
[»] chr1 (65 HSPs)
chr1 (818-888)||(35274347-35274417)
chr1 (824-888)||(40499059-40499123)
chr1 (814-888)||(40400431-40400506)
chr1 (814-888)||(52044006-52044081)
chr1 (814-888)||(32086993-32087067)
chr1 (818-888)||(32117566-32117636)
chr1 (815-888)||(1441825-1441898)
chr1 (815-888)||(6016107-6016180)
chr1 (815-888)||(12602420-12602493)
chr1 (815-888)||(23443789-23443862)
chr1 (815-888)||(26308084-26308157)
chr1 (815-888)||(29921380-29921453)
chr1 (815-888)||(32561932-32562005)
chr1 (815-888)||(48933796-48933869)
chr1 (815-888)||(51001525-51001598)
chr1 (818-886)||(41713351-41713419)
chr1 (814-888)||(13234932-13235007)
chr1 (798-888)||(19247393-19247481)
chr1 (814-888)||(24317586-24317661)
chr1 (814-885)||(24663832-24663903)
chr1 (814-888)||(34270375-34270450)
chr1 (818-888)||(5673382-5673452)
chr1 (815-888)||(7009490-7009563)
chr1 (815-888)||(8113366-8113439)
chr1 (827-888)||(9640165-9640226)
chr1 (827-888)||(13073632-13073693)
chr1 (815-888)||(19513709-19513782)
chr1 (815-888)||(45941945-45942018)
chr1 (818-889)||(24317580-24317652)
chr1 (818-889)||(34270384-34270456)
chr1 (814-888)||(13236793-13236868)
chr1 (833-888)||(14289788-14289843)
chr1 (814-888)||(42948597-42948672)
chr1 (837-888)||(46291215-46291266)
chr1 (826-888)||(1702327-1702389)
chr1 (839-888)||(40536259-40536308)
chr1 (816-888)||(52025059-52025132)
chr1 (812-888)||(17702504-17702580)
chr1 (818-889)||(40400425-40400497)
chr1 (818-889)||(52044015-52044087)
chr1 (825-875)||(17474912-17474962)
chr1 (812-854)||(32561905-32561947)
chr1 (818-879)||(52025061-52025123)
chr1 (815-888)||(3486205-3486278)
chr1 (818-879)||(18909586-18909647)
chr1 (815-888)||(24527242-24527315)
chr1 (815-872)||(24664094-24664151)
chr1 (818-870)||(51676834-51676887)
chr1 (812-872)||(1441701-1441761)
chr1 (818-854)||(6016165-6016201)
chr1 (812-872)||(8113455-8113515)
chr1 (818-889)||(13234941-13235013)
chr1 (812-872)||(29921718-29921778)
chr1 (818-889)||(42948591-42948663)
chr1 (814-885)||(51676828-51676900)
chr1 (814-888)||(18909582-18909656)
chr1 (814-888)||(11172961-11173038)
chr1 (810-880)||(14290020-14290090)
chr1 (810-872)||(19247512-19247574)
chr1 (842-888)||(20581968-20582014)
chr1 (810-872)||(32117631-32117693)
chr1 (814-889)||(49823584-49823657)
chr1 (847-888)||(39568988-39569029)
chr1 (847-888)||(39982811-39982852)
chr1 (847-888)||(44722345-44722386)
[»] chr2 (34 HSPs)
chr2 (815-888)||(31640045-31640118)
chr2 (826-886)||(13479981-13480041)
chr2 (814-888)||(10554460-10554534)
chr2 (814-888)||(44799163-44799237)
chr2 (815-888)||(7722047-7722120)
chr2 (815-888)||(26171611-26171684)
chr2 (815-888)||(38628581-38628654)
chr2 (815-886)||(10522121-10522192)
chr2 (814-888)||(13195791-13195866)
chr2 (814-888)||(34202711-34202786)
chr2 (814-888)||(40811326-40811401)
chr2 (815-886)||(44456357-44456428)
chr2 (814-888)||(45443158-45443232)
chr2 (816-888)||(1520635-1520708)
chr2 (827-888)||(4072903-4072964)
chr2 (815-888)||(4331046-4331119)
chr2 (815-888)||(16313134-16313207)
chr2 (815-888)||(40658798-40658871)
chr2 (818-889)||(13195800-13195872)
chr2 (818-889)||(34202705-34202777)
chr2 (818-889)||(40811335-40811407)
chr2 (815-886)||(8034272-8034343)
chr2 (818-879)||(1520637-1520699)
chr2 (815-888)||(458043-458115)
chr2 (843-888)||(31569199-31569244)
chr2 (812-872)||(4073237-4073297)
chr2 (812-872)||(4331392-4331452)
chr2 (812-872)||(38628895-38628955)
chr2 (810-872)||(13480044-13480106)
chr2 (842-888)||(25852990-25853036)
chr2 (847-888)||(2390271-2390312)
chr2 (847-888)||(21658361-21658402)
chr2 (847-888)||(42343402-42343443)
chr2 (814-888)||(44143819-44143891)
[»] chr8 (56 HSPs)
chr8 (810-886)||(44953449-44953525)
chr8 (814-888)||(3032535-3032610)
chr8 (814-888)||(3136835-3136910)
chr8 (814-888)||(24822325-24822400)
chr8 (815-888)||(4006283-4006356)
chr8 (815-888)||(38234952-38235025)
chr8 (815-888)||(44026111-44026184)
chr8 (825-888)||(5347073-5347136)
chr8 (814-888)||(15840200-15840275)
chr8 (825-888)||(38459547-38459610)
chr8 (814-887)||(2827797-2827870)
chr8 (815-888)||(31793246-31793319)
chr8 (815-888)||(33771805-33771878)
chr8 (815-888)||(39713113-39713186)
chr8 (815-888)||(42687390-42687463)
chr8 (815-888)||(44696079-44696152)
chr8 (818-889)||(15840194-15840266)
chr8 (818-889)||(42512585-42512657)
chr8 (815-886)||(42512592-42512664)
chr8 (814-888)||(17602054-17602129)
chr8 (815-886)||(35329281-35329352)
chr8 (815-886)||(38168018-38168089)
chr8 (837-888)||(43576349-43576400)
chr8 (814-888)||(43663942-43664017)
chr8 (826-888)||(36057154-36057215)
chr8 (815-888)||(11266644-11266717)
chr8 (815-888)||(12722946-12723019)
chr8 (815-888)||(44704223-44704296)
chr8 (825-888)||(6107-6171)
chr8 (818-889)||(3032544-3032616)
chr8 (818-889)||(3136844-3136916)
chr8 (818-889)||(17602048-17602120)
chr8 (818-889)||(24822334-24822406)
chr8 (818-889)||(43663951-43664023)
chr8 (814-888)||(5599484-5599559)
chr8 (814-888)||(26290370-26290445)
chr8 (814-888)||(26303627-26303702)
chr8 (814-888)||(34564655-34564730)
chr8 (834-888)||(26992062-26992116)
chr8 (812-886)||(32910809-32910885)
chr8 (818-870)||(34564664-34564717)
chr8 (815-888)||(38946314-38946387)
chr8 (818-889)||(5599493-5599565)
chr8 (818-889)||(26290379-26290451)
chr8 (818-889)||(26303636-26303708)
chr8 (812-872)||(33771729-33771789)
chr8 (814-854)||(44696054-44696094)
chr8 (812-872)||(44704312-44704372)
chr8 (825-888)||(1848618-1848681)
chr8 (833-880)||(16635950-16635997)
chr8 (824-888)||(40184451-40184519)
chr8 (812-882)||(31793574-31793644)
chr8 (837-879)||(39365681-39365723)
chr8 (812-882)||(42687665-42687735)
chr8 (847-888)||(23356848-23356889)
chr8 (812-873)||(36057216-36057277)
[»] chr6 (27 HSPs)
chr6 (21-264)||(16717211-16717448)
chr6 (815-888)||(6926318-6926391)
chr6 (815-888)||(8525721-8525794)
chr6 (815-888)||(11368371-11368444)
chr6 (815-888)||(34085294-34085367)
chr6 (814-888)||(7141620-7141695)
chr6 (814-888)||(13889647-13889722)
chr6 (814-888)||(32173287-32173361)
chr6 (818-889)||(6625734-6625806)
chr6 (818-889)||(13889656-13889728)
chr6 (814-888)||(6167588-6167663)
chr6 (818-888)||(6625744-6625815)
chr6 (814-888)||(29121956-29122031)
chr6 (809-888)||(29622912-29622991)
chr6 (814-888)||(29630103-29630178)
chr6 (815-888)||(13444770-13444843)
chr6 (818-889)||(7141614-7141686)
chr6 (818-889)||(29121965-29122037)
chr6 (818-889)||(29630112-29630184)
chr6 (837-888)||(23350937-23350988)
chr6 (815-888)||(31090783-31090856)
chr6 (842-874)||(13444901-13444933)
chr6 (812-880)||(31090937-31091005)
chr6 (822-905)||(33659876-33659959)
chr6 (791-872)||(11368686-11368765)
chr6 (839-889)||(18894126-18894176)
chr6 (847-888)||(6675469-6675510)
[»] scaffold0003 (2 HSPs)
scaffold0003 (815-886)||(365395-365466)
scaffold0003 (812-854)||(365451-365493)
[»] scaffold0578 (1 HSPs)
scaffold0578 (815-888)||(9157-9230)
[»] scaffold0847 (1 HSPs)
scaffold0847 (837-888)||(1-52)
[»] scaffold0368 (2 HSPs)
scaffold0368 (814-888)||(14270-14345)
scaffold0368 (818-889)||(14264-14336)
[»] scaffold0007 (1 HSPs)
scaffold0007 (815-886)||(200351-200422)
[»] scaffold0438 (2 HSPs)
scaffold0438 (814-888)||(1707-1782)
scaffold0438 (818-889)||(1716-1788)
[»] scaffold0062 (2 HSPs)
scaffold0062 (814-888)||(40934-41009)
scaffold0062 (818-870)||(40947-41000)


Alignment Details
Target: chr5 (Bit Score: 64; Significance: 2e-27; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 162 - 265
Target Start/End: Complemental strand, 2873624 - 2873521
Alignment:
Q  162 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaattt 261  Q
    |||||||||||||||  |||||||||||||||||  |||||| || |||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |    
T  2873624 tgcaatttagcaaaatgtggttctgaaataagtgtattccaagttttgcacacacatctacacatgagaagagacttaatgggaagttgaagaagaatgt 2873525  T
Q  262 gggt 265  Q
    ||||    
T  2873524 gggt 2873521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 21 - 266
Target Start/End: Original strand, 8637768 - 8638007
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattattaaatt 120  Q
    |||||||||||||| |||||||| ||||||||  |||||||||||||| ||||| ||||||||||||| | ||||||||| || ||| ||  || |  |     
T  8637768 ataggcgcaagcttcacatgattgttgcttccaatctcaaacttttcatgatcacactcaagaaggtacatggttcttgacactagtctaccatcattt- 8637866  T
Q  121 ccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatct 220  Q
         | ||||||||||| || |    | | | | | ||| |||||||||||||||  |||||| ||||| | || ||||||| |  |||| |||||| |    
T  8637867 -----gtccgaatcatgagactaaggggcgctcgctcaaattgcaatttagcaaaatgtggttccgaaatcattgttttccaaatcttgcacacacattt 8637961  T
Q  221 acaaatgagaagagacttaatgggaagttgaagcagaatttgggtg 266  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  8637962 acaaatgagaagagacttaatggaaagttgaagcagaatttgggtg 8638007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 128 - 309
Target Start/End: Original strand, 8678722 - 8678903
Alignment:
Q  128 ccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatg 227  Q
    ||||||||||| ||||  ||||| | | | ||||| |||||||||||||  ||||||||||||||||| ||||||| |  |||| |||||| ||||||||    
T  8678722 ccgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaataagtgttttccaaatcttgcacacacatttacaaatg 8678821  T
Q  228 agaagagacttaatgggaagttgaagcagaatttgggtgatgagtggttcaggaagattatcaaaatatggataaagctcat 309  Q
    |||||||| ||||||||||| ||||||| ||| ||||  ||||   ||   |||||||||||||| || |||||||| ||||    
T  8678822 agaagagatttaatgggaagatgaagcaaaatgtgggcaatgatgtgtgatggaagattatcaaagtaaggataaagttcat 8678903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 128 - 309
Target Start/End: Original strand, 8645214 - 8645395
Alignment:
Q  128 ccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatg 227  Q
    ||||||||||| ||||  ||||| | | | ||||| |||||||||||||  ||||||||||||||||| ||||||| |  |||| ||||||  |||||||    
T  8645214 ccgaatcatgagacaaacttgtgatcgctcaaagttcaatttagcaaaatgtggttctgaaataagtgttttccaaatcttgcacacacattcacaaatg 8645313  T
Q  228 agaagagacttaatgggaagttgaagcagaatttgggtgatgagtggttcaggaagattatcaaaatatggataaagctcat 309  Q
    |||||||| ||||||||||| |||||||  || ||||  ||||   ||   |||||||||||||| || |||||||||||||    
T  8645314 agaagagatttaatgggaagatgaagcaacatgtgggcaatgatgtgtgatggaagattatcaaagtaaggataaagctcat 8645395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 9004389 - 9004486
Alignment:
Q  162 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 259  Q
    |||||||||||||||  ||||| |||||||| || ||||||| |  |||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  9004389 tgcaatttagcaaaatgtggttatgaaataattgttttccaaatcttgcacacacatctacaaataagaagagacttaatgggaagatgaagcagaat 9004486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 2844306 - 2844093
Alignment:
Q  28 caagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattat-taaattccgagg 126  Q
    ||||||| |||||||| ||||||||  |||||||||||||||  ||| ||||||||||||||||| ||||||| ||   | |||| | |||||| |||      
T  2844306 caagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacactcctatattgtctaaatttcga-- 2844209  T
Q  127 gccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaat 226  Q
         |||| ||||| |  | ||| | | | ||| |||||||||||||||  ||||||||| |||||||  |||||| || |||| ||||||||||| ||    
T  2844208 -----atcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaaattttgcacacacatctacatat 2844114  T
Q  227 gagaagagacttaatgggaag 247  Q
    |||||||||||||||||||||    
T  2844113 gagaagagacttaatgggaag 2844093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 28 - 247
Target Start/End: Complemental strand, 2856139 - 2855926
Alignment:
Q  28 caagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattat-taaattccgagg 126  Q
    ||||||| |||||||| ||||||||  |||||||||||||||  ||| ||||||||||||||||| ||||||| ||   | |||| | |||||| |||      
T  2856139 caagcttcacatgatttttgcttccaatctcaaacttttcagcttcacactcaagaaggtataggtttcttgacactcctatattgtctaaatttcga-- 2856042  T
Q  127 gccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaat 226  Q
         |||| ||||| |  | ||| | | | ||| |||||||||||||||  ||||||||| |||||||  |||||| || |||| ||||||||||| ||    
T  2856041 -----atcacgaaactaactggtgctcgctcaaattgcaatttagcaaaatgtggttctgatataagtgtattccaaattttgcacacacatctacatat 2855947  T
Q  227 gagaagagacttaatgggaag 247  Q
    |||||||||||||||||||||    
T  2855946 gagaagagacttaatgggaag 2855926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 8547229 - 8547123
Alignment:
Q  158 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 257  Q
    |||||||||||||||||||  | |||||||||||| || ||||||| |  |||| |||||| ||||||||||||||||||| ||| |||||| |||||||    
T  8547229 aaagtgcaatttagcaaaatgttgttctgaaataattgttttccaaatcttgcaaacacatttacaaatgagaagagacttgatgtgaagtttaagcaga 8547130  T
Q  258 atttggg 264  Q
    || ||||    
T  8547129 atgtggg 8547123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 812 - 886
Target Start/End: Complemental strand, 13210586 - 13210512
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13210586 tacatgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 13210512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 9073820 - 9073723
Alignment:
Q  162 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 259  Q
    |||||||||||||||  ||||||||||||||||  ||||||| || |||| |||||| ||||||||||||||| ||| | ||||||| ||||||||||    
T  9073820 tgcaatttagcaaaatgtggttctgaaataagtcttttccaaattttgcacacacatttacaaatgagaagaggcttgacgggaagtcgaagcagaat 9073723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 21 - 259
Target Start/End: Complemental strand, 1599523 - 1599291
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattattaaatt 120  Q
    |||||||||||||| ||| |||  ||||||||  |||||||||||||||| ||| ||||||||||||| | ||||||||||||  | | ||      | |    
T  1599523 ataggcgcaagcttcacacgatcgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacaaggttcttgatactcggtaat------agt 1599430  T
Q  121 ccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatct 220  Q
    |   || ||||||||||| || |  | ||| | | | ||||||| |||||||||||  || ||||||||| | || ||||||| || |||| ||| || |    
T  1599429 cattggtccgaatcatgagactaagtggtgatcgctcaaagtgcgatttagcaaaatgtgattctgaaatcaatgttttccaaattttgcacacagattt 1599330  T
Q  221 acaaatgagaagagacttaatgggaagttgaagcagaat 259  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  1599329 acaaatgagaagcgacttaataggaagttgaagcagaat 1599291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 9066090 - 9066165
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  9066090 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 9066165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 27309482 - 27309556
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  27309482 catgtaaaataagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 27309556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 37106569 - 37106639
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37106569 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37106639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 2904130 - 2904045
Alignment:
Q  162 tgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaag 247  Q
    ||||||||||| ||  | ||||||||||||||||  |||||| || |||| ||||||||||| |||||||||||||||||||||||    
T  2904130 tgcaatttagcgaatttaggttctgaaataagtgtattccaaattttgcacacacatctacatatgagaagagacttaatgggaag 2904045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 4621735 - 4621808
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4621735 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4621808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 6245802 - 6245875
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6245802 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6245875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 37274334 - 37274261
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37274334 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37274261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 38768841 - 38768914
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38768841 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38768914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 818 - 886
Target Start/End: Original strand, 18979019 - 18979087
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||| |||| |||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  18979019 taaactcagcttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 18979087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 812 - 888
Target Start/End: Complemental strand, 43548130 - 43548054
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||| | || |||| ||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43548130 tacatgtaaacttagattaagtaggtcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43548054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 4155822 - 4155747
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4155822 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4155747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 8529820 - 8529899
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 100  Q
    ||||| ||||||||||||||||| ||||||||  |||||||||| ||||| ||  ||||||||||||| |||||||||||    
T  8529820 ataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtacagggttcttga 8529899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 880
Target Start/End: Original strand, 25085409 - 25085476
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25085409 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaa 25085476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 880
Target Start/End: Original strand, 25143381 - 25143448
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25143381 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaa 25143448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 40739721 - 40739784
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40739721 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 818 - 885
Target Start/End: Complemental strand, 42436864 - 42436797
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    |||| ||| ||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  42436864 taaactcaatttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaa 42436797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 43293361 - 43293286
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  43293361 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 43293286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 815 - 885
Target Start/End: Original strand, 31499379 - 31499449
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||||||||    
T  31499379 atgtaaactaagttaaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaaattaa 31499449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 37341394 - 37341463
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  37341394 taaactcagtttaagtaggttatgtaaa-taagtttacatgaacctacttaaactgaatttaagttaacct 37341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 10665698 - 10665625
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  10665698 atgtaaactaagtttaagtagattatgtaaactatgtttacatgaacctacttaaactgaatttaagttaacct 10665625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 31485213 - 31485286
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31485213 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 41881415 - 41881342
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  41881415 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 41881342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 4155756 - 4155828
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4155756 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 4155828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 9073955 - 9073879
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttct 97  Q
    |||||| ||||||||||||| || ||||||||  |||||||||||||||| ||| ||||||||||||| | ||||||    
T  9073955 ataggctcaagcttgacatgtttgttgcttccaatctcaaacttttcaggttcacactcaagaaggtacatggttct 9073879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 13145560 - 13145485
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| ||||| |||||||    
T  13145560 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttaagttaacct 13145485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 19034399 - 19034324
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||| |||||||||||| |||||||    
T  19034399 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctactttaactgaatttaagttaacct 19034324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 37866282 - 37866357
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  37866282 catgaaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 37866357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 38760006 - 38760077
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| ||||||||||||||| |||||||||| || |||||||| ||| |||| || ||||||    
T  38760006 taaattcagtttaagtaggttatgtaaactgagtttacatgaacctacttaaattgagtttacatgaaccta 38760077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 826 - 888
Target Start/End: Original strand, 8233132 - 8233194
Alignment:
Q  826 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| ||| |||||||||||||||||||| | || |||||||||||||||||| |||||||    
T  8233132 gtttaagtagattatgtaaactaagtttacacgaacctacttaaactgaatttaagttaacct 8233194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 818 - 879
Target Start/End: Original strand, 43293295 - 43293357
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  43293295 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 43293357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 259
Target Start/End: Original strand, 8536523 - 8536616
Alignment:
Q  166 atttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcagaat 259  Q
    |||||||||||  || ||||||||| | || ||||||| || |||| ||| || ||||||||||||| |||||||  |||||||||||||||||    
T  8536523 atttagcaaaatgtgattctgaaatcaatgttttccaaattttgcacacagatttacaaatgagaagcgacttaaatggaagttgaagcagaat 8536616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 15272240 - 15272167
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||  ||| |||||||||||||||||||||| || ||||| |||||||||||| |||||||    
T  15272240 atgtaaactaagtttatgtagattatgtaaactaagtttacatgaacctacttgaactgaatttaagttaacct 15272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 18522554 - 18522627
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||| |||| |||||||||||| || |||||||||||||||||| |||||||    
T  18522554 atgtaaactaagtttaagtagattatctaaattaagtttacatgaacctacttaaactgaatttaagttaacct 18522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 818 - 874
Target Start/End: Complemental strand, 37866348 - 37866291
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 874  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  37866348 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactga 37866291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 2873752 - 2873680
Alignment:
Q  28 caagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 100  Q
    ||||||| |||||||| ||||||||  |||||||||||||||  ||  ||||||||||||||||| |||||||    
T  2873752 caagcttcacatgattgttgcttccaatctcaaacttttcagcttcgcactcaagaaggtataggtttcttga 2873680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 9066156 - 9066084
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  9066156 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 9066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 13145494 - 13145566
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13145494 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13145566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 19034333 - 19034405
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    ||||||||||| || |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  19034333 taaattcagttaaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 19034405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 811 - 888
Target Start/End: Complemental strand, 19351741 - 19351662
Alignment:
Q  811 atacatgtaaattcagtttaaataggttatgtaaactaagtttac--atgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||| | || |||||| ||| |||||||||||||||||||  |||||| |||||||| ||||||||| |||||||    
T  19351741 atacatgtatactcggtttaagtagattatgtaaactaagtttacatatgtacctacttaaattgaatttaagttaacct 19351662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 25085475 - 25085403
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  25085475 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 25085403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 25143447 - 25143375
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  25143447 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 25143375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 8536384 - 8536451
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggta 88  Q
    |||||| |||| || |||||||  ||||||||  |||||||||||| |||||||||||||||||||||    
T  8536384 ataggcacaagtttcacatgatcgttgcttccaatctcaaacttttgaggatcagactcaagaaggta 8536451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 8529945 - 8530051
Alignment:
Q  158 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 257  Q
    ||||||| ||||||||||   || ||||||||||| || |||||||  | |||| |||||| |||||||||||| ||||||||  |||||| |||| |||    
T  8529945 aaagtgcgatttagcaaattgtgattctgaaataattgttttccaaactttgcacacacatttacaaatgagaacagacttaaatggaagtcgaaggaga 8530044  T
Q  258 atttggg 264  Q
    || ||||    
T  8530045 atgtggg 8530051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 842 - 888
Target Start/End: Original strand, 10552764 - 10552810
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||    
T  10552764 taaactaagtttacatgaacctacttaaactgaatttaagttaacct 10552810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 812 - 882
Target Start/End: Original strand, 31484889 - 31484959
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 882  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||||    
T  31484889 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaaat 31484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 7339362 - 7339435
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || | |||||||||||||| | |||||||    
T  7339362 atgtaaactaagtttaagtaaattatgtaaactaagtttacatgaacctgcttaaactgaattttagttaacct 7339435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Original strand, 6245477 - 6245537
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  6245477 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 6245537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 854
Target Start/End: Original strand, 6245781 - 6245817
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||| ||||||||||||||||||||||||||||||||    
T  6245781 taaactcagtttaaataggttatgtaaactaagttta 6245817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 854
Target Start/End: Complemental strand, 10665723 - 10665683
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  10665723 catgtaaactcagtttaagtaggttatgtaaactaagttta 10665683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Original strand, 18864866 - 18864926
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  18864866 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 18864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 885
Target Start/End: Original strand, 36294473 - 36294546
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtac---gtacttaaactgaatttaaattaa 885  Q
    |||||||| | ||||||||||| |||||||||||||||||||||| ||    |||||||||||||||||| ||||    
T  36294473 catgtaaacttagtttaaatag-ttatgtaaactaagtttacatgaacctgctacttaaactgaatttaagttaa 36294546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 8645113 - 8645180
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggta 88  Q
    ||||| |||||||||||| || | ||||||||  | | |||||||||||||||| |||||||||||||    
T  8645113 ataggtgcaagcttgacacgactgttgcttccaatttgaaacttttcaggatcacactcaagaaggta 8645180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 818 - 857
Target Start/End: Original strand, 12188813 - 12188852
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacat 857  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  12188813 taaattcagtttatgtaggttatgtaaactaagtttacat 12188852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 38760071 - 38759997
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||| ||||| |||||| ||||||||| |||||||||  || |||||||||||||||||| |||||||    
T  38760071 catgtaaactcaatttaagtaggttcatgtaaactcagtttacata-acctacttaaactgaatttaagttaacct 38759997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 872
Target Start/End: Complemental strand, 10665958 - 10665896
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| | | ||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  10665958 tatacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 10665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 880
Target Start/End: Original strand, 18978590 - 18978656
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||| | ||||| | ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  18978590 catgtaaacttagtttcagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 18978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 818 - 879
Target Start/End: Original strand, 35318943 - 35319005
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||||||||||||| |||||| |||| || |||||||||||| || |||||||||||| ||||    
T  35318943 taaattcagtttaagtaggttcatgttaattaagtttacatgaacctacttaaactgagttta 35319005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 854
Target Start/End: Original strand, 36294447 - 36294489
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||    
T  36294447 tacatataaattcagtttaaataggtcatgtaaacttagttta 36294489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 882
Target Start/End: Complemental strand, 41881716 - 41881646
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 882  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| | |||||||    
T  41881716 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcagtttaaat 41881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 872
Target Start/End: Complemental strand, 43548529 - 43548471
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||| | ||||| | ||||| ||||||||||||||||  ||||||||||||||||    
T  43548529 catgtaaacttagtttcagtaggtcatgtaaactaagtttaagtgtacgtacttaaact 43548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 812 - 865
Target Start/End: Complemental strand, 42437170 - 42437117
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtac 865  Q
    |||||||||||| | ||||| ||||| ||||||||||||||||  |||||||||    
T  42437170 tacatgtaaatttattttaagtaggtcatgtaaactaagtttaagtgtacgtac 42437117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 21 - 253
Target Start/End: Original strand, 5498 - 5724
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattattaaatt 120  Q
    |||||| ||||||| |||||||| ||||||||  |||||||||||| ||||||  | ||||||||||||||||||||||| ||  || ||| | ||  ||    
T  5498 ataggctcaagcttcacatgattgttgcttccaatctcaaactttttaggatcgcattcaagaaggtatagggttcttgacactcgtctat-agtatctt 5596  T
Q  121 ccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatct 220  Q
         |  |||||||||| || | |  ||| | | | |||||| ||||||||||||  |||||||||||| | |||||||||| || |||| |||||| |    
T  5597 -----gttcgaatcatgagactaatcggtgatcgctcaaagtgtaatttagcaaaatgtggttctgaaatcattgctttccaaattttgcacacacattt 5691  T
Q  221 acaaatgagaagagacttaatgggaagttgaag 253  Q
    |||||||||||||||||| ||||||||||||||    
T  5692 acaaatgagaagagacttgatgggaagttgaag 5724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 1e-19; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 10594581 - 10594651
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10594581 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10594651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 46924309 - 46924384
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  46924309 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 46924384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 48360945 - 48360839
Alignment:
Q  158 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 257  Q
    ||||||| ||||||||||   || ||||||||| |||| ||||||| || |||| ||| || ||||||| |||||||||||||||||||||||||| |||    
T  48360945 aaagtgcgatttagcaaattgtgattctgaaatcagtgttttccaaattttgcacacagatttacaaataagaagagacttaatgggaagttgaaggaga 48360846  T
Q  258 atttggg 264  Q
    || ||||    
T  48360845 atgtggg 48360839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 7883491 - 7883418
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7883491 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7883418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 12429389 - 12429462
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12429389 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 12429462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 25226010 - 25226083
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||    
T  25226010 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacgtacttaaactgaatttaagttaacct 25226083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 40862950 - 40863023
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40862950 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40863023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 43776860 - 43776933
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43776860 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43776933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 47010887 - 47010960
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47010887 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47010960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 48613401 - 48613474
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48613401 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48613474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 8215341 - 8215266
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  8215341 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 8215266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 21278681 - 21278606
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  21278681 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 21278606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 29042469 - 29042532
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  29042469 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 29042532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 309
Target Start/End: Original strand, 35780855 - 35781006
Alignment:
Q  158 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 257  Q
    ||||||||||||||||||    ||||||||||| | || ||| ||  || |||| ||||||||||||||||||||||| || |||||||||||||||| |    
T  35780855 aaagtgcaatttagcaaattgcggttctgaaatcattgtttttcagattatgcacacacatctacaaatgagaagagattttatgggaagttgaagcaaa 35780954  T
Q  258 atttgggtgatgagtggttcaggaagattatcaaaatatggataaagctcat 309  Q
    || |||| | ||||  |    ||||||||||||||||| || ||||| ||||    
T  35780955 atgtgggcggtgaggtgggatggaagattatcaaaataagggtaaaggtcat 35781006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 36688311 - 36688240
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  36688311 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 36688240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 43246655 - 43246580
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43246655 catgtaaacttagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43246580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 43501813 - 43501742
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  43501813 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 43501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 47065563 - 47065488
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||| |||||||    
T  47065563 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttaagttaacct 47065488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 816 - 886
Target Start/End: Complemental strand, 42436026 - 42435956
Alignment:
Q  816 tgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  42436026 tgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 42435956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 48874048 - 48873974
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  48874048 catgtaaatcgagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 48873974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 12847045 - 12846972
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12847045 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 12846972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 40305191 - 40305118
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40305191 atgtaaactaagtttaagtagattatgtaaactgagtttacatgcacctacttaaactgaatttaagttaacct 40305118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 44709590 - 44709517
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  44709590 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctatttaaactgaatttaagttaacct 44709517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 45869885 - 45869812
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||| |||||||    
T  45869885 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacttacttaaactgaatttaagttaacct 45869812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 46102267 - 46102340
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||||||||| |||| || |||||||||||||||||| |||||||    
T  46102267 atgtaaactaagtttaagtagattatgtaaactaagttttcatgaacctacttaaactgaatttaagttaacct 46102340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 8215275 - 8215347
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  8215275 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 8215347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 21278615 - 21278687
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  21278615 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 21278687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 26015448 - 26015520
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  26015448 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 26015520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 35924603 - 35924531
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||| |||| || ||||||    
T  35924603 taaattcagtttaagtatgttcatgtaaactaagtttacatgtacctacttaaactgagtttacataaaccta 35924531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 19474771 - 19474834
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  19474771 agtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 19474834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 880
Target Start/End: Complemental strand, 26015514 - 26015447
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  26015514 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaa 26015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 39597341 - 39597270
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  39597341 atgtaaactaagttaaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 39597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 47540876 - 47540939
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| |||||||||||||||||||||| || ||||||||||| |||||| |||||||    
T  47540876 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgtatttaagttaacct 47540939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 48361067 - 48360996
Alignment:
Q  29 aagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 100  Q
    |||||| ||||| || ||||||||  |||||||||||||||||||| ||||||||||||| | |||||||||    
T  48361067 aagcttcacatggttgttgcttccaatctcaaacttttcaggatcacactcaagaaggtacatggttcttga 48360996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 823 - 888
Target Start/End: Complemental strand, 32541799 - 32541733
Alignment:
Q  823 tcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  32541799 tcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 32541733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 35924538 - 35924612
Alignment:
Q  815 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||||||||| |||||  ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  35924538 atgtaaactcagtttaagtaggtacatgtaaacttagtttacatgaacatacttaaactgaatttaagttaacct 35924612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 20493266 - 20493339
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||| ||||||||| || |||||||| ||||||||| |||||||    
T  20493266 atgtaaactaagtttaagtagattatgtaaactatgtttacatgaacctacttaaattgaatttaagttaacct 20493339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 818 - 874
Target Start/End: Original strand, 32541742 - 32541799
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 874  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||||||    
T  32541742 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactga 32541799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 40995660 - 40995588
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||||||||||| || || |||||||||||| |||| || ||||||    
T  40995660 taaattcagtttaagtaggttcatgtaaactaagtttacgtgaacctacttaaactgagtttagatgaaccta 40995588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 46924375 - 46924303
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  46924375 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 46924303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 40995598 - 40995669
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||| | ||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40995598 taaactcagtttaagtaggttcacgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 40995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 814 - 859
Target Start/End: Complemental strand, 21874185 - 21874139
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgt 859  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  21874185 catgtaaactcagtttaaataggttcatgtaaactaagtttacatgt 21874139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 815 - 877
Target Start/End: Original strand, 24981421 - 24981483
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatt 877  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||| |||||||    
T  24981421 atgtaaactaagtttaagtagcttatgtaaactaagtttacatgaacctacttaacctgaatt 24981483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 791 - 872
Target Start/End: Original strand, 43776506 - 43776585
Alignment:
Q  791 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| ||||||| |||  ||||  ||||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  43776506 ttcaaacttgttcaatgattctac--gtaatatcagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 43776585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 880
Target Start/End: Complemental strand, 7883567 - 7883499
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||||||| ||||||| ||||| ||||||||| ||||||  || || |||||||||| |||||||    
T  7883567 tacatgtaaatttagtttaagtaggtcatgtaaactgagtttaagtggacatacttaaactcaatttaa 7883499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 854
Target Start/End: Original strand, 25225985 - 25226025
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  25225985 catgtaaattgagtttaagtaggttatgtaaactaagttta 25226025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 25877212 - 25877285
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||  | |||||||||| || |||||||||||||||||| |||||||    
T  25877212 catgtaaactcagtttaagtaggttcatgtaa--ttagtttacatgaacctacttaaactgaatttaagttaacct 25877285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 837 - 889
Target Start/End: Original strand, 32661966 - 32662018
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  32661966 ttatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 32662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 43246589 - 43246661
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||| | |||| || ||||||    
T  43246589 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactaagtttacatgaaccta 43246661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 47065497 - 47065569
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  47065497 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 47065569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 878
Target Start/End: Complemental strand, 41469846 - 41469783
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaattt 878  Q
    ||||||| ||||||||  || ||| ||||||||||||||||||| || |||||||||| |||||    
T  41469846 atgtaaactcagtttatgtaagttttgtaaactaagtttacatgaacctacttaaacttaattt 41469783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 42095179 - 42095104
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||| ||||| |||| | ||||||||| | |||||||| || |||||||||||||||||| |||||||    
T  42095179 catgtaaactcaatttaagtaggctcatgtaaactcaatttacatgaacctacttaaactgaatttaagttaacct 42095104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 25066646 - 25066608
Alignment:
Q  729 gaatttttctagttacatcctatttaattctttttacac 767  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  25066646 gaatttttctagttacaccctatttaattcttgttacac 25066608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 7900907 - 7900948
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  7900907 taagtttacatgaacctacttaaactgaatttaagttaacct 7900948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 823 - 872
Target Start/End: Original strand, 21202623 - 21202672
Alignment:
Q  823 tcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    ||||||||| ||||||||||||||| ||||||  ||||| ||||||||||    
T  21202623 tcagtttaagtaggttatgtaaactgagtttaagtgtacatacttaaact 21202672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 25877276 - 25877206
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||  ||||||| || |||||||||||| |||| || ||||||    
T  25877276 taaattcagtttaagtaggttcatgtaaactaa--ttacatgaacctacttaaactgagtttacatgaaccta 25877206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 46321702 - 46321661
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  46321702 taagtttacatgaacctacttaaactgaatttaagttaacct 46321661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 798 - 854
Target Start/End: Original strand, 48613362 - 48613416
Alignment:
Q  798 ttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    ||||| |||||||||||  ||||  ||||||||| ||||||||||||||||||||||    
T  48613362 ttgttcaatgattatac--gtaatatcagtttaagtaggttatgtaaactaagttta 48613416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 1e-19; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 22847527 - 22847597
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  22847527 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 22847597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 812 - 886
Target Start/End: Complemental strand, 42131289 - 42131215
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||||| ||||||| |||||    
T  42131289 tacatgtaaactcagtttaagtaggttatgtaaactacgtttacatgtacctacttaaactaaatttaagttaac 42131215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 3027020 - 3027093
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3027020 atgtaaactaagtttaaatagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3027093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 40430818 - 40430891
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40430818 atgtaaactaagtttaaatagattatgtaaactaagtttacatgaacctacttaaactgaatttaatttaacct 40430891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 9443981 - 9444060
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttga 100  Q
    ||||| ||||||||||||||||| ||||||||  |||||||||| ||||| ||  |||||||||||||||||||||||||    
T  9443981 ataggtgcaagcttgacatgattgttgcttccaatctcaaacttatcaggctcgcactcaagaaggtatagggttcttga 9444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 34159908 - 34159978
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  34159908 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 34159978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 50469574 - 50469648
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||||||||||||||||||||||| || | |||||||||||||||| |||||||    
T  50469574 catgtaaactgagtttaagtaggttatgtaaactaagtttacatgaacttgcttaaactgaatttaagttaacct 50469648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 3025892 - 3025819
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3025892 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3025819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 10480901 - 10480828
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10480901 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10480828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 11691404 - 11691477
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  11691404 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 11691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 13961960 - 13961887
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  13961960 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 13961887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 24035040 - 24035113
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24035040 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24035113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 32933200 - 32933273
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32933200 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32933273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 35339217 - 35339144
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35339217 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35339144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 37829445 - 37829518
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  37829445 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 37829518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 43621233 - 43621160
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  43621233 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 43621160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 48990957 - 48991030
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48990957 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48991030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 812 - 888
Target Start/End: Original strand, 36852242 - 36852318
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||| | ||||||| ||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  36852242 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttacatgaacctacttaaactgaatttaagttaacct 36852318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 19873763 - 19873688
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||| |||||||    
T  19873763 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttaagttaacct 19873688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 20434519 - 20434594
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  20434519 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 20434594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 818 - 888
Target Start/End: Complemental strand, 28406125 - 28406054
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  28406125 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 28406054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 42349107 - 42349182
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  42349107 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 42349182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 42723822 - 42723747
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  42723822 catgttaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 42723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 53874726 - 53874651
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  53874726 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 53874651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 55183208 - 55183133
Alignment:
Q  814 catgtaaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||  || |||||||||||||||||| |||||||    
T  55183208 catgtaaactcagtttaagtaggttaatgtaaactaagtttacattaacctacttaaactgaatttaagttaacct 55183133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 24897378 - 24897448
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| || || |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24897378 taaactcagtttaagtaagtcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24897448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 1523373 - 1523446
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  1523373 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 1523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 20292901 - 20292828
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| |||  ||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  20292901 atgtaaactaagtttaagtagactatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 20292828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 22301348 - 22301275
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  22301348 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 22301275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 30215383 - 30215310
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  30215383 atgtaaactaagtttaagtagattatgtaaaccaagtttacatgaacttacttaaactgaatttaagttaacct 30215310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 47429315 - 47429242
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| | | |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47429315 atgtaaactaagtttaagttgattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47429242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 827 - 888
Target Start/End: Complemental strand, 47467023 - 47466962
Alignment:
Q  827 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  47467023 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 47466962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 50561901 - 50561974
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  50561901 atgtaaactaagtttaagtagattatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 50561974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 818 - 874
Target Start/End: Complemental strand, 51323129 - 51323072
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 874  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  51323129 taaattcagtttaagtaggttcatgtaaactaagtttacatgtacatacttaaactga 51323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 20434585 - 20434513
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  20434585 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 20434513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 53874660 - 53874732
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  53874660 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 53874732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 614280 - 614354
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  614280 catgtaaactcagtttaagtaggttcatgtaaacta-gtttacatgaacctacttaaactgaatttaagttaacct 614354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 55220274 - 55220349
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  55220274 catgtaaactcattttaagtaggttcatgtaaactcagtttacatgaacctacttaaactgaatttaagttaacct 55220349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 815 - 885
Target Start/End: Original strand, 7318708 - 7318778
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    ||||||||| ||||||| ||  |||| ||||||||||||||||| || |||||||||||||||||| ||||    
T  7318708 atgtaaattaagtttaagtatattatttaaactaagtttacatgaacctacttaaactgaatttaagttaa 7318778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 818 - 879
Target Start/End: Complemental strand, 42349173 - 42349111
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  42349173 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 42349111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 783 - 886
Target Start/End: Original strand, 7794767 - 7794869
Alignment:
Q  783 ttaacctcttcaaacttgtttaatgattatacatgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaa 881  Q
    ||||||||||||| |||||||||||||| |||  ||||  | | ||||| || ||  ||||||||| ||||||||||||| ||||||||||||||||||     
T  7794767 ttaacctcttcaaccttgtttaatgattctac--gtaatcttattttaagtatgtccatgtaaactcagtttacatgtacctacttaaactgaatttaag 7794864  T
Q  882 ttaac 886  Q
    |||||    
T  7794865 ttaac 7794869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 8713682 - 8713755
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||  || |||||||||||||||||| |||||||    
T  8713682 atgtaaactaagtttaagtaagttacgtaaactaagtttacataaacctacttaaactgaatttaagttaacct 8713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 32135946 - 32136019
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || ||||||||||| |||||| |||||||    
T  32135946 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgtatttaagttaacct 32136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 28406063 - 28406135
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  28406063 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttatatgaaccta 28406135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 854
Target Start/End: Complemental strand, 35339238 - 35339202
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||||||||||||||||||||||||||||||||    
T  35339238 taaattcagtttaaataggttatgtaaactaagttta 35339202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 791 - 889
Target Start/End: Original strand, 51323040 - 51323139
Alignment:
Q  791 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    ||||| |||||| ||||||||||  | |||  ||||||||| || ||  ||||||||| |||||||||| || |||||||||||||||||| ||||||||    
T  51323040 ttcaaccttgttcaatgattataagtataatatcagtttaagtatgtacatgtaaacttagtttacatgaacctacttaaactgaatttaagttaaccta 51323139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 55215284 - 55215209
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  55215284 catgttaactcaatttaagtaggttcatgtaaactcagtttacatgaacctacttaaactgaatttaagttaacct 55215209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 836 - 886
Target Start/End: Complemental strand, 37682851 - 37682801
Alignment:
Q  836 gttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  37682851 gttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 37682801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 837 - 887
Target Start/End: Complemental strand, 41201912 - 41201862
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacc 887  Q
    |||||||||||||||||||||| || |||||||||| ||||||| ||||||    
T  41201912 ttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacc 41201862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 842 - 888
Target Start/End: Complemental strand, 48348923 - 48348877
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||    
T  48348923 taaactaagtttacatgaacctacttaaactgaatttaagttaacct 48348877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 812 - 870
Target Start/End: Complemental strand, 48349043 - 48348985
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||| | ||||||| ||||||||||||||| |||||| |||||| ||||||||    
T  48349043 tacatgtaaacttagtttaagtaggttatgtaaactcagtttaaatgtacatacttaaa 48348985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 874
Target Start/End: Original strand, 42723756 - 42723813
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 874  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || ||||||||||||    
T  42723756 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactga 42723813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 614345 - 614274
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||| ||||||||| || |||||||||||| |||| || ||||||    
T  614345 taaattcagtttaagtaggttcatgtaaacta-gtttacatgaacctacttaaactgagtttacatgaaccta 614274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 55183142 - 55183214
Alignment:
Q  818 taaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| ||||||| |||||||| |||||||||  || |||||||||||| |||| || ||||||    
T  55183142 taaattcagtttaagtaggttaatgtaaacttagtttacattaacctacttaaactgagtttacatgaaccta 55183214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 55220340 - 55220268
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||| ||| |||| || ||||||    
T  55220340 taaattcagtttaagtaggttcatgtaaactgagtttacatgaacctacttaaaatgagtttacatgaaccta 55220268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 870
Target Start/End: Original strand, 11691090 - 11691137
Alignment:
Q  823 tcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaa 870  Q
    ||||||||| ||||| |||||||||||||||| |||||| ||||||||    
T  11691090 tcagtttaagtaggtcatgtaaactaagtttaaatgtacatacttaaa 11691137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 19873697 - 19873768
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || |||||    
T  19873697 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaacct 19873768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 818 - 880
Target Start/End: Complemental strand, 24897439 - 24897377
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||||    
T  24897439 taaattcagtttaagtaggttcatgtaaacttagtttacatg-acttacttaaactgagtttaa 24897377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 812 - 875
Target Start/End: Complemental strand, 47467092 - 47467029
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaa 875  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| |||||||||||||    
T  47467092 tacatgtaaacttagtttaagtaggtaatgtaaactgagtttaagtgtacatacttaaactgaa 47467029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 9444106 - 9444212
Alignment:
Q  158 aaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatctacaaatgagaagagacttaatgggaagttgaagcaga 257  Q
    ||||||||||||||||||   || ||||||||| | || |||||||  | |||| ||| || |||||||||||| ||||||||  |||||| |||| |||    
T  9444106 aaagtgcaatttagcaaattgtgattctgaaatcattgttttccaaactttgcacacagatttacaaatgagaacagacttaaatggaagtcgaaggaga 9444205  T
Q  258 atttggg 264  Q
    || ||||    
T  9444206 atgtggg 9444212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 889
Target Start/End: Complemental strand, 25858114 - 25858041
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||||||| |||||| |||||||   |||||||||| || |||||||||||| |||| || ||||||    
T  25858114 catgtaaattcagtttaagtaggttcatgtaaa---agtttacatgaacctacttaaactgagtttacatgaaccta 25858041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 889
Target Start/End: Original strand, 25858047 - 25858120
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||| ||||||||| |||||| |||||||||   |||||||| || ||||||||||||||||| || ||||||    
T  25858047 catgtaaactcagtttaagtaggttcatgtaaact---tttacatgaacctacttaaactgaatttacatgaaccta 25858120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 822 - 872
Target Start/End: Complemental strand, 50602003 - 50601953
Alignment:
Q  822 ttcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| ||||||||||||||| ||||||  ||||| ||||||||||    
T  50602003 ttcagtttaagtaggttatgtaaactgagtttaagtgtacatacttaaact 50601953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 840 - 885
Target Start/End: Original strand, 3020164 - 3020209
Alignment:
Q  840 tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    |||||| |||||||||||| || |||||||||||||||||| ||||    
T  3020164 tgtaaattaagtttacatgaacctacttaaactgaatttaagttaa 3020209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 839 - 880
Target Start/End: Original strand, 7818123 - 7818164
Alignment:
Q  839 atgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  7818123 atgtaaactcagtttacatatacctacttaaactgaatttaa 7818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 818 - 874
Target Start/End: Complemental strand, 15659095 - 15659038
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactga 874  Q
    ||||||||| |||| |||||| |||||||||||||||||| |||  ||||||||||||    
T  15659095 taaattcagattaagtaggttcatgtaaactaagtttacacgtagatacttaaactga 15659038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 20738188 - 20738229
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  20738188 taagtttacatgaacctacttaaactgaatttaagttaacct 20738229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 815 - 872
Target Start/End: Complemental strand, 51322070 - 51322013
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    ||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  51322070 atgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 51322013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 818 - 870
Target Start/End: Original strand, 55215218 - 55215271
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || ||||||||    
T  55215218 taaattcagtttaagtaggttcatgtaaactgagtttacatgaacctacttaaa 55215271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 1e-19; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 818 - 888
Target Start/End: Complemental strand, 2612827 - 2612757
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  2612827 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 2612757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 48585200 - 48585273
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  48585200 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacgtacttaaactgaatttaagttaacct 48585273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 812 - 888
Target Start/End: Original strand, 31608039 - 31608115
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||| | ||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  31608039 tacatgtaaacttagtttaagtgggttatgtaaactaagtttacatgtacctacctaaactgaatttaagttaacct 31608115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 10841073 - 10840998
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  10841073 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10840998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 38871532 - 38871607
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38871532 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 30419255 - 30419329
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  30419255 catgtaaatcgagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 30419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 818 - 888
Target Start/End: Complemental strand, 44353898 - 44353828
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  44353898 taaactcagtttaagtaggttatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 44353828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 7680734 - 7680661
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7680734 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7680661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 38144746 - 38144673
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38144746 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 52813522 - 52813595
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  52813522 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52813595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 814 - 886
Target Start/End: Original strand, 33392974 - 33393046
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||    
T  33392974 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 33393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 4044456 - 4044381
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4044456 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4044381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 7149647 - 7149572
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  7149647 catgtaaactcagtttaagtaggttcatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 7149572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 24200068 - 24200131
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24200068 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 36430723 - 36430798
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  36430723 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 36430798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 37971354 - 37971279
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  37971354 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 37971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 41070291 - 41070366
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  41070291 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 41070366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 4515684 - 4515610
Alignment:
Q  815 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  4515684 atgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 4515610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 815 - 881
Target Start/End: Original strand, 11124449 - 11124515
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaa 881  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11124449 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaaa 11124515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 833 - 886
Target Start/End: Complemental strand, 18168188 - 18168135
Alignment:
Q  833 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  18168188 taggttatataaactaagtttacatgtacctacttaaactgaatttaagttaac 18168135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 35155283 - 35155210
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| | |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35155283 atgtaaactaagtttaagtagataatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35155210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 35233247 - 35233174
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||| ||||||||| |||||||    
T  35233247 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaattgaatttaagttaacct 35233174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 41589267 - 41589340
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  41589267 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 41589340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 49779377 - 49779304
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  49779377 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctatttaaactgaatttaagttaacct 49779304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 4044390 - 4044462
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4044390 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 4044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 4515619 - 4515691
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  4515619 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacataaaccta 4515691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 33712364 - 33712288
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  33712364 catgtaaactcagtttaagtaggttcatgtaaacttaagtttacatgaacctacttaaactgaatttaagttaacct 33712288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 36430789 - 36430717
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  36430789 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 36430717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 37971288 - 37971360
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  37971288 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 37971360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 41070357 - 41070285
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  41070357 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 41070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 7153246 - 7153171
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| || ||| |||||||||||||||||||  || |||||||||||||||||| |||||||    
T  7153246 catgtaaactcagtttaagtaagtttatgtaaactaagtttacataaacttacttaaactgaatttaagttaacct 7153171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 10999432 - 10999357
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||| |||||| ||||||||| ||||||| || || |||||||||| ||||||| |||||||    
T  10999432 catgtaaattcagtttaagtaggttcatgtaaacttagtttacgtgaacctacttaaacttaatttaagttaacct 10999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 36840229 - 36840158
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  36840229 atgtaaactaagtttaagtaaattatgtaaactaagtttacatgaacatacttaaactgaatttaagttaac 36840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 815 - 885
Target Start/End: Original strand, 19942154 - 19942224
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||| ||||||||| ||||    
T  19942154 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaattgaatttaagttaa 19942224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 10841007 - 10841079
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  10841007 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 10841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 10999366 - 10999438
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||| ||||||| |||||| | |||||||||||||||||| || ||||||||||||||||| || ||||||    
T  10999366 taaattaagtttaagtaggttcacgtaaactaagtttacatgaacctacttaaactgaatttacatgaaccta 10999438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 38871598 - 38871526
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  38871598 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 38871526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 812 - 888
Target Start/End: Complemental strand, 47097895 - 47097819
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| |||| | ||||||| ||| | |||||||||||||||||||| || |||||||||||||||||  |||||||    
T  47097895 tacatataaacttagtttaagtagatcatgtaaactaagtttacatgaacctacttaaactgaatttatgttaacct 47097819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 53974689 - 53974764
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  53974689 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 53974764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 843 - 888
Target Start/End: Complemental strand, 20656904 - 20656859
Alignment:
Q  843 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  20656904 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 20656859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 843 - 888
Target Start/End: Original strand, 32236737 - 32236782
Alignment:
Q  843 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  32236737 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 32236782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 33712297 - 33712370
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| ||||||||||| || |||||||||||| |||| || ||||||    
T  33712297 taaattcagtttaagtaggttcatgtaaacttaagtttacatgaacctacttaaactgagtttacatgaaccta 33712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 870
Target Start/End: Complemental strand, 53974755 - 53974702
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  53974755 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 53974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 7149581 - 7149653
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| | |||||||| || |||||||||||| |||| || ||||||    
T  7149581 taaattcagtttaagtaggttcatgtaaacttaatttacatgaacctacttaaactgagtttacatgaaccta 7149653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 36232416 - 36232356
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  36232416 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 36232356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 38145047 - 38144987
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  38145047 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 38144987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 889
Target Start/End: Original strand, 10999441 - 10999488
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    ||||||||||||||||| || ||||||||||||||||| || ||||||    
T  10999441 taaactaagtttacatgaacctacttaaactgaatttacatgaaccta 10999488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 872
Target Start/End: Complemental strand, 2613131 - 2613069
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| | | ||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  2613131 tatacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 2613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 880
Target Start/End: Complemental strand, 36841063 - 36840997
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||| | ||||| ||||||| ||||||||| ||||||  ||||| |||||||||||| |||||    
T  36841063 catgtaaacttagtttcaataggtcatgtaaactgagtttaagtgtacatacttaaactgagtttaa 36840997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 854
Target Start/End: Original strand, 41589240 - 41589282
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||||| | ||||||| ||||||||||||||||||||||    
T  41589240 tacatgtaaacttagtttaagtaggttatgtaaactaagttta 41589282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 22781455 - 22781414
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  22781455 taagtttacatgaacctacttaaactgaatttaagttaacct 22781414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 838 - 879
Target Start/End: Original strand, 39626454 - 39626495
Alignment:
Q  838 tatgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    ||||||||||||||||||||| || |||||||||||| ||||    
T  39626454 tatgtaaactaagtttacatgaacctacttaaactgagttta 39626495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 35274347 - 35274417
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  35274347 taaactcagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 35274417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 824 - 888
Target Start/End: Original strand, 40499059 - 40499123
Alignment:
Q  824 cagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40499059 cagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40499123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 40400431 - 40400506
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40400431 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40400506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 52044081 - 52044006
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  52044081 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52044006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 32086993 - 32087067
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  32086993 catgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 32087067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 818 - 888
Target Start/End: Complemental strand, 32117636 - 32117566
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32117636 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32117566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 1441825 - 1441898
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| |||||| ||||||||||||||||||| || |||||||||||||||||| |||||||    
T  1441825 atgtaaactaagtttaagtaggttgtgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 1441898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 6016180 - 6016107
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6016180 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6016107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 12602420 - 12602493
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  12602420 atgtaaattaagtttaagtaaattatgtaaactaagtttacatgaacttacttaaactgaatttaagttaacct 12602493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 23443862 - 23443789
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  23443862 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 23443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 26308084 - 26308157
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  26308084 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 26308157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 29921453 - 29921380
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  29921453 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 29921380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 32561932 - 32562005
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  32561932 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 32562005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 48933796 - 48933869
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  48933796 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 48933869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 51001598 - 51001525
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  51001598 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 51001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 818 - 886
Target Start/End: Original strand, 41713351 - 41713419
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||| ||||||||| |||||||||||||||||||||| ||| || |||||||||||||||||| |||||    
T  41713351 taaactcagtttaagtaggttatgtaaactaagtttaaatgaacctacttaaactgaatttaagttaac 41713419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 13235007 - 13234932
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  13235007 catgtaaactcagtttaagtaggttcatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 13234932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 798 - 888
Target Start/End: Complemental strand, 19247481 - 19247393
Alignment:
Q  798 ttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| |||||||||||  ||||  ||||||||| ||||| ||||||||| ||||||  ||||| ||||||||||||||||||||||||||    
T  19247481 ttgttcaatgattatac--gtaatatcagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaactgaatttaaattaacct 19247393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 24317586 - 24317661
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  24317586 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 24317661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 885
Target Start/End: Complemental strand, 24663903 - 24663832
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    |||||||| |||||||||||| |||||||||||||| |||||||| || || ||||||||||||||| ||||    
T  24663903 catgtaaactcagtttaaataagttatgtaaactaaatttacatgaacctatttaaactgaatttaagttaa 24663832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 34270450 - 34270375
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34270450 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34270375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 5673382 - 5673452
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  5673382 taaactcagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 5673452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 7009490 - 7009563
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  7009490 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7009563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 8113439 - 8113366
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  8113439 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaaccaacttaaactgaatttaagttaacct 8113366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 827 - 888
Target Start/End: Complemental strand, 9640226 - 9640165
Alignment:
Q  827 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  9640226 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 9640165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 827 - 888
Target Start/End: Original strand, 13073632 - 13073693
Alignment:
Q  827 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  13073632 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 13073693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 19513782 - 19513709
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  19513782 atgtaaactaagtttaagtagattatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 19513709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 45941945 - 45942018
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||| |||||||||| |||||||    
T  45941945 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaatctgaatttaagttaacct 45942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 24317652 - 24317580
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  24317652 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 24317580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 34270384 - 34270456
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  34270384 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 34270456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 13236868 - 13236793
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| || ||| |||||||||||||||||||  || |||||||||||||||||| |||||||    
T  13236868 catgtaaactcagtttaagtaagtttatgtaaactaagtttacataaacttacttaaactgaatttaagttaacct 13236793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 833 - 888
Target Start/End: Complemental strand, 14289843 - 14289788
Alignment:
Q  833 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  14289843 taggttatgtaaactaagtttacatgaaccaacttaaactgaatttaagttaacct 14289788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 42948597 - 42948672
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  42948597 catgtaaacttagtttaagtaggtttatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 42948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 837 - 888
Target Start/End: Complemental strand, 46291266 - 46291215
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  46291266 ttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 46291215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 826 - 888
Target Start/End: Original strand, 1702327 - 1702389
Alignment:
Q  826 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| ||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||    
T  1702327 gtttaagtagattatgtaaactatgtttacatgaacctacttaaactgaatttaagttaacct 1702389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 839 - 888
Target Start/End: Complemental strand, 40536308 - 40536259
Alignment:
Q  839 atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  40536308 atgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40536259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 816 - 888
Target Start/End: Original strand, 52025059 - 52025132
Alignment:
Q  816 tgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||| ||||| |||||||    
T  52025059 tgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttaatttaacct 52025132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 812 - 888
Target Start/End: Original strand, 17702504 - 17702580
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  |||||  ||||||||||||||||| |||||||    
T  17702504 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacacacttaaactgaatttaagttaacct 17702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 40400497 - 40400425
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  40400497 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 40400425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 52044015 - 52044087
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  52044015 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 52044087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 825 - 875
Target Start/End: Original strand, 17474912 - 17474962
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaa 875  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||    
T  17474912 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaa 17474962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 812 - 854
Target Start/End: Original strand, 32561905 - 32561947
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||||| ||||||||| ||||||||||||||||||||||    
T  32561905 tacatgtaaactcagtttaagtaggttatgtaaactaagttta 32561947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 818 - 879
Target Start/End: Complemental strand, 52025123 - 52025061
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||| ||||    
T  52025123 taaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagttta 52025061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 3486205 - 3486278
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||| ||||||||| |||| ||| || |||||||||||||||||| |||||||    
T  3486205 atgtaaactaagtttaagtagattacgtaaactaaatttagatgaacctacttaaactgaatttaagttaacct 3486278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 879
Target Start/End: Complemental strand, 18909647 - 18909586
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||| ||||||||| ||||||||||||||| |||||||||| || |||||||| ||| ||||    
T  18909647 taaactcagtttaagtaggttatgtaaacttagtttacatgaacctacttaaaatgagttta 18909586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 24527315 - 24527242
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | || |||| || |||| |||||||||||||||||| || |||||||||| ||||||| |||||||    
T  24527315 atgtaaactaagattaagtaagttacgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 24527242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 872
Target Start/End: Complemental strand, 24664151 - 24664094
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    ||||||||| ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  24664151 atgtaaatttagtttaaataggtcatgtaaacttagtttaagtgtacatacttaaact 24664094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 870
Target Start/End: Original strand, 51676834 - 51676887
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  51676834 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 51676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Original strand, 1441701 - 1441761
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  1441701 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 1441761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 854
Target Start/End: Complemental strand, 6016201 - 6016165
Alignment:
Q  818 taaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||| ||||||||||||||||||||||||||||||||    
T  6016201 taaactcagtttaaataggttatgtaaactaagttta 6016165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 8113515 - 8113455
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  8113515 tacatgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 8113455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 13234941 - 13235013
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| | |||||||| || |||||||||||| |||| || ||||||    
T  13234941 taaattcagtttaagtaggttcatgtaaacttaatttacatgaacctacttaaactgagtttacatgaaccta 13235013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 29921778 - 29921718
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  29921778 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 29921718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 42948663 - 42948591
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||  || |||||||||| | |||| || ||||||    
T  42948663 taaattcagtttaagtaggttcatgtaaactaagtttacataaacctacttaaactaagtttacatgaaccta 42948591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 885
Target Start/End: Complemental strand, 51676900 - 51676828
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaa 885  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| ||||    
T  51676900 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaa 51676828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 18909582 - 18909656
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||| ||||| |||||| |||||||||||||||||||  || |||||||||||| ||||| |||||||    
T  18909582 catgtaaactcattttaagtaggttcatgtaaactaagtttacat-aacctacttaaactgagtttaagttaacct 18909656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 11173038 - 11172961
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaact--aagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||| ||||| |||||| |||||||||  ||||||||||| || |||||||| ||||||||| |||||||    
T  11173038 catgtaaactcaatttaagtaggttcatgtaaacttaaagtttacatgaacctacttaaattgaatttaagttaacct 11172961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 880
Target Start/End: Complemental strand, 14290090 - 14290020
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||| ||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  14290090 tatatatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 14290020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 872
Target Start/End: Complemental strand, 19247574 - 19247512
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| | ||||| |||| || ||||||||||||||||  ||||| ||||||||||    
T  19247574 tatacatgtaaacttagtttcaataagtcatgtaaactaagtttaagtgtacatacttaaact 19247512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 842 - 888
Target Start/End: Complemental strand, 20582014 - 20581968
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| |||||||||| || |||||||||||||||||| |||||||    
T  20582014 taaactgagtttacatgaacatacttaaactgaatttaagttaacct 20581968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 872
Target Start/End: Complemental strand, 32117693 - 32117631
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| ||||||||||    
T  32117693 tatacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaact 32117631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 814 - 889
Target Start/End: Original strand, 49823584 - 49823657
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||| ||||||||| |||||| |||||||||   |||||||| || ||||||||||||||||| || ||||||    
T  49823584 catgtaaactcagtttaagtaggttcatgtaaact---tttacatgaacctacttaaactgaatttacatgaaccta 49823657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 39569029 - 39568988
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  39569029 taagtttacatgaacctacttaaactgaatttaagttaacct 39568988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 39982811 - 39982852
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  39982811 taagtttacatgaacctacttaaactgaatttaagttaacct 39982852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 44722345 - 44722386
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  44722345 taagtttacatgaacctacttaaactgaatttaagttaacct 44722386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 31640118 - 31640045
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| |||||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31640118 atgtaaacttagtttaagtaggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31640045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 826 - 886
Target Start/End: Complemental strand, 13480041 - 13479981
Alignment:
Q  826 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13480041 gtttaaataggttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 13479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 10554534 - 10554460
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  10554534 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 10554460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 44799163 - 44799237
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  44799163 catgtaaactaagtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 44799237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 7722120 - 7722047
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  7722120 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 7722047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 26171611 - 26171684
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  26171611 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 26171684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 38628654 - 38628581
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38628654 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38628581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 815 - 886
Target Start/End: Original strand, 10522121 - 10522192
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  10522121 atgtaaactaagtttaactagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 10522192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 13195866 - 13195791
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  13195866 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 13195791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 34202711 - 34202786
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34202711 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34202786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 40811401 - 40811326
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40811401 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 40811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 44456428 - 44456357
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  44456428 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 44456357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 45443232 - 45443158
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| ||||||| ||||||| |||||||||| || |||||||||||||||||| |||||||    
T  45443232 catgtaaactaagtttaagtaggttacgtaaactgagtttacatgaacctacttaaactgaatttaagttaacct 45443158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 816 - 888
Target Start/End: Original strand, 1520635 - 1520708
Alignment:
Q  816 tgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  1520635 tgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacttacttaaactgaatttaagttaacct 1520708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 827 - 888
Target Start/End: Complemental strand, 4072964 - 4072903
Alignment:
Q  827 tttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4072964 tttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4072903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 4331119 - 4331046
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||||    
T  4331119 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacttagttaaactgaatttaagttaacct 4331046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 16313207 - 16313134
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||  |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  16313207 atgtaaactaagtttaagtatattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 16313134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 40658871 - 40658798
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  40658871 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 40658798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 13195800 - 13195872
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13195800 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13195872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 34202777 - 34202705
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  34202777 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 34202705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 40811335 - 40811407
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  40811335 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 40811407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 8034343 - 8034272
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||||| |||||| |||||    
T  8034343 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgtatttaatttaac 8034272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 818 - 879
Target Start/End: Complemental strand, 1520699 - 1520637
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||||||||||||| || ||| |||||||||||||||||||| || |||||||||||| ||||    
T  1520699 taaattcagtttaagtaagttcatgtaaactaagtttacatgaacctacttaaactgagttta 1520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 458115 - 458043
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||| | ||| || |||||||||||||||||| |||||||    
T  458115 atgtaaactaagtttaagtagattatgtaaactaagtt-atatgaacatacttaaactgaatttaagttaacct 458043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 843 - 888
Target Start/End: Complemental strand, 31569244 - 31569199
Alignment:
Q  843 aaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||| || |||||||||||||||||| |||||||    
T  31569244 aaactaagtttacatgaacctacttaaactgaatttaagttaacct 31569199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 4073297 - 4073237
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | | ||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  4073297 tacatgtaaacttattttaagtaggttatgtaaactaagtttaagtgtacatacttaaact 4073237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 4331452 - 4331392
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  4331452 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 4331392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 38628955 - 38628895
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  38628955 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 38628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 810 - 872
Target Start/End: Complemental strand, 13480106 - 13480044
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| ||||||||||    
T  13480106 tatacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaact 13480044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 842 - 888
Target Start/End: Complemental strand, 25853036 - 25852990
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| |||||||||| || |||||||||||||||||| |||||||    
T  25853036 taaactgagtttacatgaacctacttaaactgaatttaagttaacct 25852990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 2390312 - 2390271
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  2390312 taagtttacatgaacctacttaaactgaatttaagttaacct 2390271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 21658361 - 21658402
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  21658361 taagtttacatgaacctacttaaactgaatttaagttaacct 21658402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Original strand, 42343402 - 42343443
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  42343402 taagtttacatgaacctacttaaactgaatttaagttaacct 42343443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 44143819 - 44143891
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||||||||| |||||| |||||||   |||||||||| || |||||||||||||||||| |||||||    
T  44143819 catgttaactcagtttaagtaggttcatgtaaa---agtttacatgaacctacttaaactgaatttaagttaacct 44143891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 810 - 886
Target Start/End: Original strand, 44953449 - 44953525
Alignment:
Q  810 tatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    |||| ||||||| ||| |||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  44953449 tatagatgtaaactcaatttaaatatgttatgtaaacaaagtttacatgtacctacttaaactgaatttaagttaac 44953525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 3032610 - 3032535
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3032610 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 3136910 - 3136835
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3136910 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 3136835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 24822400 - 24822325
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||||||||||||||||||| || |||||||||||||||||| |||||||    
T  24822400 catgtaaactcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 24822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 4006283 - 4006356
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  4006283 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 4006356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 38234952 - 38235025
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38234952 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38235025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 44026111 - 44026184
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  44026111 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 44026184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 825 - 888
Target Start/End: Complemental strand, 5347136 - 5347073
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||||||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  5347136 agtttaagtaggttacgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 5347073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 15840200 - 15840275
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  15840200 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 15840275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 825 - 888
Target Start/End: Complemental strand, 38459610 - 38459547
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  38459610 agtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 38459547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 814 - 887
Target Start/End: Complemental strand, 2827870 - 2827797
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacc 887  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||| || | |||||||| ||||||| ||||||    
T  2827870 catgtaaactcagtttaagtaggttatgaaaactaagtttacatgaacctgcttaaacttaatttaagttaacc 2827797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 31793319 - 31793246
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | |||| || ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  31793319 atgtaaactaagttgaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 31793246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 33771805 - 33771878
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  33771805 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactaaatttaagttaacct 33771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 39713113 - 39713186
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| || |||| |||||||||||||||||| || |||||||||||||||||| |||||||    
T  39713113 atgtaaactaagtttaagtaagttacgtaaactaagtttacatgaacatacttaaactgaatttaagttaacct 39713186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 42687463 - 42687390
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||| |||||||| |||||||    
T  42687463 atgtaaagtaagtttaagtagattatgtaaactaagtttacatgaacttacttaaacagaatttaagttaacct 42687390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 44696079 - 44696152
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | |||||||||||||||||||||| ||||||||||| || | |||||| ||||||||| |||||||    
T  44696079 atgtaaactaagtttaaataggttatgtaaacgaagtttacatgaacctgcttaaattgaatttaagttaacct 44696152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 15840266 - 15840194
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  15840266 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 15840194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 42512657 - 42512585
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  42512657 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacataaaccta 42512585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 815 - 886
Target Start/End: Original strand, 42512592 - 42512664
Alignment:
Q  815 atgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||    
T  42512592 atgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaac 42512664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 17602054 - 17602129
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||| |||| |||||||||| || |||||||||||||||||| |||||||    
T  17602054 catgtaaactcagtttaagtaggttcatgttaacttagtttacatgaacctacttaaactgaatttaagttaacct 17602129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 35329352 - 35329281
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||||| ||||||| ||| |||| ||||||||||| ||||| || |||||||||||||||||| |||||    
T  35329352 atgtaaattgagtttaagtagattatctaaactaagttcacatgaacctacttaaactgaatttaagttaac 35329281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 38168089 - 38168018
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || || ||||||||||||||| |||||    
T  38168089 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacatatttaaactgaatttaagttaac 38168018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 837 - 888
Target Start/End: Complemental strand, 43576400 - 43576349
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  43576400 ttatgtaaactaagtttacatctacttacttaaactgaatttaagttaacct 43576349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 43664017 - 43663942
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  43664017 catgtaaactgagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 43663942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 826 - 888
Target Start/End: Complemental strand, 36057215 - 36057154
Alignment:
Q  826 gtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||| ||||||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  36057215 gtttaagtaggttatgtaaa-taagtttacatgaacctacttaaactgaatttaagttaacct 36057154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 11266644 - 11266717
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||  || || ||||||||||||||| |||||||    
T  11266644 atgtaaactaagtttaagtagattatgtaaactaagtttacataaacctaattaaactgaatttaagttaacct 11266717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 12722946 - 12723019
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || ||||||||  |||||||| |||||||    
T  12722946 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaatagaatttaagttaacct 12723019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 44704296 - 44704223
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||||| ||||| || || |||||||||||||||||| |||||||    
T  44704296 atgtaaactaagtttaagtagattatgtaaactaaatttacctgaacctacttaaactgaatttaagttaacct 44704223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 825 - 888
Target Start/End: Original strand, 6107 - 6171
Alignment:
Q  825 agtttaaataggttatgtaaact-aagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||||| |||||||    
T  6107 agtttaagtagattatgtaaacttaagtttacatgaacctacttaaactgaatttaagttaacct 6171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 3032544 - 3032616
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  3032544 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 3032616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 3136844 - 3136916
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  3136844 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 3136916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 17602120 - 17602048
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||| ||||| || |||||||||||| |||| || ||||||    
T  17602120 taaattcagtttaagtaggttcatgtaaactaagttaacatgaacctacttaaactgagtttacatgaaccta 17602048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 24822334 - 24822406
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||| |||||||||| || |||||||||||| |||| || ||||||    
T  24822334 taaattcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgagtttacatgaaccta 24822406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 43663951 - 43664023
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||| | |||| || ||||||    
T  43663951 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactcagtttacatgaaccta 43664023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 5599559 - 5599484
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||| | || |||||||||||| ||||| |||||||    
T  5599559 catgtaaactcagtttaagtaggttcatgtaaacttagtttacacgaacctacttaaactgagtttaagttaacct 5599484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 26290445 - 26290370
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  26290445 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 26290370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 26303702 - 26303627
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  26303702 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 26303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 34564730 - 34564655
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  34564730 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 34564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 834 - 888
Target Start/End: Complemental strand, 26992116 - 26992062
Alignment:
Q  834 aggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||||||||||||||||||| | || ||||||||||||||| || |||||||    
T  26992116 aggttatgtaaactaagtttacacgaacctacttaaactgaattgaagttaacct 26992062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 812 - 886
Target Start/End: Original strand, 32910809 - 32910885
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtac--gtacttaaactgaatttaaattaac 886  Q
    ||||| |||| | ||||||| ||||||||||||| ||||||||| |||||   |||||||||||||||||| |||||    
T  32910809 tacatataaactaagtttaagtaggttatgtaaattaagtttacttgtacctatacttaaactgaatttaagttaac 32910885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 870
Target Start/End: Original strand, 34564664 - 34564717
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  34564664 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 34564717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 38946314 - 38946387
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||||||| ||| |||| || |||||||||| ||||||| |||||||    
T  38946314 atgtaaacttagtttaagtagattatgtaaactaatttttcatgaacctacttaaacttaatttaagttaacct 38946387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 5599493 - 5599565
Alignment:
Q  818 taaattcagtttaaataggtta-tgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||| ||||||||| ||||||  ||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  5599493 taaactcagtttaagtaggttcgtgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 5599565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 26290379 - 26290451
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  26290379 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 26290451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 26303636 - 26303708
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  26303636 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 26303708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Original strand, 33771729 - 33771789
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||||||||| ||||||||| ||||||  ||||| ||||||||||    
T  33771729 tacatgtaaacttagtttaaataggtcatgtaaactgagtttaagtgtacatacttaaact 33771789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 814 - 854
Target Start/End: Original strand, 44696054 - 44696094
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  44696054 catgtaaactcagtttaagtaggttatgtaaactaagttta 44696094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 872
Target Start/End: Complemental strand, 44704372 - 44704312
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    |||||||||| | ||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  44704372 tacatgtaaacttagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 44704312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 825 - 888
Target Start/End: Complemental strand, 1848681 - 1848618
Alignment:
Q  825 agtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||||||| ||||||| ||  ||  ||||||||||||||||| |||||||    
T  1848681 agtttaaacaggttatgtaaaccaagtttatataaaccaacttaaactgaatttaagttaacct 1848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 833 - 880
Target Start/End: Original strand, 16635950 - 16635997
Alignment:
Q  833 taggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    ||||||||||||| |||| ||||| |||| ||||||||||||||||||    
T  16635950 taggttatgtaaattaagattacaagtacctacttaaactgaatttaa 16635997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 824 - 888
Target Start/End: Original strand, 40184451 - 40184519
Alignment:
Q  824 cagtttaaataggttatgtaaac----taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||||||    || ||||||||| || ||||||| |||||||||| |||||||    
T  40184451 cagtttaaataggttatgtaaactaggtaggtttacatgaacctacttaatctgaatttaagttaacct 40184519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 882
Target Start/End: Complemental strand, 31793644 - 31793574
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 882  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| ||| |||||    
T  31793644 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatctaaat 31793574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 879
Target Start/End: Complemental strand, 39365723 - 39365681
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaattta 879  Q
    |||||||||||||||||||||| || |||||||||||| ||||    
T  39365723 ttatgtaaactaagtttacatgaacctacttaaactgagttta 39365681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 882
Target Start/End: Complemental strand, 42687735 - 42687665
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaat 882  Q
    |||||||||| | | ||||| ||||| |||||||||||||||| |||||  |||||||||| | |||||||    
T  42687735 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaaatgtatatacttaaactcagtttaaat 42687665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 23356889 - 23356848
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  23356889 taagtttacatgaacctacttaaactgaatttaagttaacct 23356848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 812 - 873
Target Start/End: Complemental strand, 36057277 - 36057216
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactg 873  Q
    |||||||||| | ||||||| ||||| ||||||||| ||||||  ||||| |||||||||||    
T  36057277 tacatgtaaacttagtttaagtaggtcatgtaaactgagtttaagtgtacatacttaaactg 36057216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 6e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 21 - 264
Target Start/End: Original strand, 16717211 - 16717448
Alignment:
Q  21 ataggcgcaagcttgacatgattattgcttcccgtctcaaacttttcaggatcagactcaagaaggtatagggttcttgatacaagtttattattaaatt 120  Q
    |||||| |||| || |||||||| ||||||||  ||||||||||||| |||||  |||| |||||||| ||||||||||| ||  |||||| | ||  ||    
T  16717211 ataggctcaagattcacatgattgttgcttccaatctcaaacttttctggatcgcactctagaaggtagagggttcttgacactcgtttat-agtatctt 16717309  T
Q  121 ccgagggccgaatcatgaaacaagtttgtgtttgttgaaagtgcaatttagcaaaacttggttctgaaataagtgctttccaatttgtgcagacacatct 220  Q
         |  |||||||||| || | || ||| ||| | |||||| ||||||||||||   | ||||||||| | |  ||||||| || |||| |||||| |    
T  16717310 -----gttcgaatcatgagactaattggtgattgctcaaagtgtaatttagcaaaatgcgattctgaaatcattcttttccaaattttgcacacacattt 16717404  T
Q  221 acaaatgagaagagacttaatgggaagttgaagcagaatttggg 264  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||    
T  16717405 acaaatgagaagagacttgatgggaagttgaagcaaaatgtggg 16717448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 6926318 - 6926391
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  6926318 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 6926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 8525721 - 8525794
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  8525721 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 8525794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 11368444 - 11368371
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  11368444 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 11368371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 34085367 - 34085294
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  34085367 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 34085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 7141620 - 7141695
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  7141620 catgtaaactcagtttaactaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 7141695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 13889722 - 13889647
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  13889722 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 13889647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 32173361 - 32173287
Alignment:
Q  814 catgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| || ||||||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  32173361 catgtaaactaagtttaagtatgttatgtaaactaagtttacatgaacctacttaaacttaatttaagttaacct 32173287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 6625806 - 6625734
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  6625806 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttatatgaaccta 6625734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 13889656 - 13889728
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  13889656 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 13889728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 6167663 - 6167588
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| |||| ||||||||||||||| || |||||||||| ||||||| |||||||    
T  6167663 catgtaaactcagtttaagtaggttcatgttaactaagtttacatgaacctacttaaactaaatttaagttaacct 6167588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 818 - 888
Target Start/End: Original strand, 6625744 - 6625815
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||| ||||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  6625744 taaactcagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 6625815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 29122031 - 29121956
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||| | |||||||||| || |||||||||||||||||| |||||||    
T  29122031 catgtaaactcagtttaagtaggttcatgtaaatttagtttacatgaacctacttaaactgaatttaagttaacct 29121956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 809 - 888
Target Start/End: Complemental strand, 29622991 - 29622912
Alignment:
Q  809 ttatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| ||||||| | ||||||| ||  |||||||||||||||||| ||| || |||||||||||||||||| |||||||    
T  29622991 ttatatatgtaaactaagtttaagtatattatgtaaactaagtttatatgaacctacttaaactgaatttaagttaacct 29622912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 29630178 - 29630103
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| ||||||||| |||||| ||||||||| |||||||||| |  |||||||||||||||||| |||||||    
T  29630178 catgtaaactcagtttaagtaggttcatgtaaacttagtttacatgaatctacttaaactgaatttaagttaacct 29630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 13444843 - 13444770
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| |||| ||||||||||||||||| |  |||||||||||||||||| |||||||    
T  13444843 atgtaaactaagtttaagtagattatttaaactaagtttacatgaatctacttaaactgaatttaatttaacct 13444770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 7141686 - 7141614
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || || ||||||||| |||| || ||||||    
T  7141686 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctagttaaactgagtttacatgaaccta 7141614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 29121965 - 29122037
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||||| |||||||| || |||||||||||| |||| || ||||||    
T  29121965 taaattcagtttaagtaggttcatgtaaactaaatttacatgaacctacttaaactgagtttacatgaaccta 29122037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 29630112 - 29630184
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| ||| || |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  29630112 taaattcagtttaagtagattcatgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 29630184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 837 - 888
Target Start/End: Original strand, 23350937 - 23350988
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||||  || |||||||||||||||||| |||||||    
T  23350937 ttatgtaaactaagtttacatcaacctacttaaactgaatttaagttaacct 23350988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 888
Target Start/End: Complemental strand, 31090856 - 31090783
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||| |||| || |||||||| || |||||||||||||||||| |||||||    
T  31090856 atgtaaactaagtttaagtagattatgcaaacaaaatttacatgaacctacttaaactgaatttaagttaacct 31090783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 842 - 874
Target Start/End: Original strand, 13444901 - 13444933
Alignment:
Q  842 taaactaagtttacatgtacgtacttaaactga 874  Q
    |||||||||||||||||||||||||||||||||    
T  13444901 taaactaagtttacatgtacgtacttaaactga 13444933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 812 - 880
Target Start/End: Complemental strand, 31091005 - 31090937
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaa 880  Q
    |||||||||| | | ||||| ||||| ||||||||||||||||  ||||| |||||||||| |||||||    
T  31091005 tacatgtaaacttattttaagtaggtcatgtaaactaagtttaagtgtacatacttaaactcaatttaa 31090937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 905
Target Start/End: Complemental strand, 33659959 - 33659876
Alignment:
Q  822 ttcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacctataaatgtttacttaaa 905  Q
    |||||||||| ||| | || |||||| |||||| |  |||||||||||||||||||||| |||| ||  ||||| |||||||||    
T  33659959 ttcagtttaagtagatcatataaactgagtttaaacatacgtacttaaactgaatttaagttaatctcaaaatgattacttaaa 33659876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 791 - 872
Target Start/End: Complemental strand, 11368765 - 11368686
Alignment:
Q  791 ttcaaacttgtttaatgattatacatgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaact 872  Q
    ||||| |||||| ||||||| |||  ||||  ||||||||| ||||| ||||||||||||||||  ||||| ||||||||||    
T  11368765 ttcaaccttgttcaatgattctac--gtaatatcagtttaagtaggtcatgtaaactaagtttaagtgtacatacttaaact 11368686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 839 - 889
Target Start/End: Complemental strand, 18894176 - 18894126
Alignment:
Q  839 atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||||||||| || |||||||||||| |||| || ||||||    
T  18894176 atgtaaactaagtttacatgaacctacttaaactgagtttacatgaaccta 18894126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 847 - 888
Target Start/End: Complemental strand, 6675510 - 6675469
Alignment:
Q  847 taagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  6675510 taagtttacatgaacatacttaaactgaatttaagttaacct 6675469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 815 - 886
Target Start/End: Complemental strand, 365466 - 365395
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | ||||||| ||| |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  365466 atgtaaactaagtttaagtagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 365395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 854
Target Start/End: Complemental strand, 365493 - 365451
Alignment:
Q  812 tacatgtaaattcagtttaaataggttatgtaaactaagttta 854  Q
    |||||||||| | ||||||| ||||||||||||||||||||||    
T  365493 tacatgtaaacttagtttaagtaggttatgtaaactaagttta 365451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 815 - 888
Target Start/End: Original strand, 9157 - 9230
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||||| | ||||||| ||| ||||||||| |||||||||||| || |||||||||||||||||| |||||||    
T  9157 atgtaaactaagtttaagtagattatgtaaattaagtttacatgaacctacttaaactgaatttaagttaacct 9230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 837 - 888
Target Start/End: Original strand, 1 - 52
Alignment:
Q  837 ttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  1 ttatgtaaactaagtttacatgaacctacttaaactgaatttaagttaacct 52  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 14270 - 14345
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| | ||||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  14270 catgtaaacttagtttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 818 - 889
Target Start/End: Complemental strand, 14336 - 14264
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| |||||||||||||||||||| || |||||||||| | |||| || ||||||    
T  14336 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaactaagtttacatgaaccta 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 815 - 886
Target Start/End: Original strand, 200351 - 200422
Alignment:
Q  815 atgtaaattcagtttaaataggttatgtaaactaagtttacatgtacgtacttaaactgaatttaaattaac 886  Q
    ||||||| | |||||||  || |||||||||||||||||||||| || |||||||||||||||||| |||||    
T  200351 atgtaaactaagtttaagcagattatgtaaactaagtttacatgaacctacttaaactgaatttaagttaac 200422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Complemental strand, 1782 - 1707
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    |||||||| || |||||| |||||| ||| ||||| |||||||||| || |||||||||||||||||| |||||||    
T  1782 catgtaaactcggtttaagtaggttcatgcaaacttagtttacatgaacctacttaaactgaatttaagttaacct 1707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 818 - 889
Target Start/End: Original strand, 1716 - 1788
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaaccta 889  Q
    |||||||||||||| |||||| ||||||||||||||| |||| || ||||||||| || |||| || ||||||    
T  1716 taaattcagtttaagtaggttcatgtaaactaagtttgcatgaacctacttaaaccgagtttacatgaaccta 1788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 814 - 888
Target Start/End: Original strand, 40934 - 41009
Alignment:
Q  814 catgtaaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaactgaatttaaattaacct 888  Q
    ||||| || ||| ||||| |||||| ||||||||| |||||||||| || |||||||||||||||||| |||||||    
T  40934 catgttaactcaatttaagtaggttcatgtaaacttagtttacatgaacctacttaaactgaatttaagttaacct 41009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 870
Target Start/End: Complemental strand, 41000 - 40947
Alignment:
Q  818 taaattcagtttaaataggtt-atgtaaactaagtttacatgtacgtacttaaa 870  Q
    |||||||||||||| |||||| |||||||||||||||||||| || ||||||||    
T  41000 taaattcagtttaagtaggttcatgtaaactaagtttacatgaacctacttaaa 40947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University