View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7645_low_19 (Length: 248)
Name: NF7645_low_19
Description: NF7645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7645_low_19 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 36942980 - 36942746
Alignment:
| Q |
14 |
atcacaaacaatctcacagatttcacatctcatttcacatttacaatagattcacagaatagacaaatgtatggagatgggattgcattcttcctagccc |
113 |
Q |
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| T |
36942980 |
atcacaaacaatctcacagatttcacatctcatttcacatttacaatagattcacagaatagacaaatgtatggagatgggattgcattcttcctagccc |
36942881 |
T |
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| Q |
114 |
cttatggttcaaaaaagcctaatgcaacaaaaggtggttctatgggtctaacacttgataaccaaaggttgaactcaactgataatccatttgttgctgt |
213 |
Q |
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| T |
36942880 |
cttatggttcaaaaaagcctaatgcaacaaaaggtggttctatgggtctaacacttgataatcaaaggttgaactcaactgataatccatttgttgctgt |
36942781 |
T |
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| Q |
214 |
ggagtttgatatctatcggaatcattgggatccac |
248 |
Q |
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| T |
36942780 |
ggagtttgatatctatcggaatcattgggatccac |
36942746 |
T |
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