View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7645_low_20 (Length: 247)
Name: NF7645_low_20
Description: NF7645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7645_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 16639702 - 16639930
Alignment:
| Q |
1 |
aaaaagagttgaaataatccatcaatatcaagggaatattctatattatttaacctagctacaccaaccacaaccacattttatacattgtataagtact |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
16639702 |
aaaaagagttgaaataatccatcaatatcaagggaatattctatattatttaacctagctacaccaaccacaaccacattttgtacattgtataagtact |
16639801 |
T |
|
| Q |
101 |
tgtaattgatgggtcgttctttgaaaatcagcaataacccttctccttctaaagctaaagaaaggaacaagacaacaacagaagtgaaatcgaagaagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
16639802 |
tgtaattgatgggtcgttctttgaaaatcagcaataacccttctccttctaaagctaaagaaaggaacaagacaacaacagaagtgaaatcaaagaagaa |
16639901 |
T |
|
| Q |
201 |
atctagcaggagaaaaatgtggtttgtgt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
16639902 |
atctagcaggagaaaaatgtggtttgtgt |
16639930 |
T |
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