View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7646_low_1 (Length: 1630)

Name: NF7646_low_1
Description: NF7646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7646_low_1
NF7646_low_1
[»] chr6 (43 HSPs)
chr6 (15-743)||(4326537-4327287)
chr6 (1298-1615)||(4326206-4326536)
chr6 (1552-1608)||(27094823-27094879)
chr6 (1493-1607)||(2251837-2251951)
chr6 (135-206)||(4330722-4330795)
chr6 (1540-1608)||(4661094-4661163)
chr6 (1493-1568)||(32141994-32142068)
chr6 (1053-1132)||(4328538-4328616)
chr6 (680-714)||(4330004-4330038)
chr6 (1543-1598)||(8374404-8374461)
chr6 (1563-1613)||(31802046-31802096)
chr6 (937-1116)||(4331835-4332014)
chr6 (1493-1608)||(7177293-7177407)
chr6 (1563-1608)||(13732810-13732855)
chr6 (1552-1608)||(4408356-4408412)
chr6 (1556-1608)||(9372221-9372273)
chr6 (1552-1608)||(9435624-9435680)
chr6 (1556-1608)||(19892296-19892348)
chr6 (1556-1608)||(31705897-31705949)
chr6 (1557-1608)||(7545327-7545378)
chr6 (1557-1608)||(7865376-7865427)
chr6 (1557-1608)||(15091446-15091497)
chr6 (1558-1609)||(30938385-30938436)
chr6 (1532-1605)||(3294765-3294839)
chr6 (1496-1591)||(5694929-5695022)
chr6 (1556-1606)||(8439675-8439725)
chr6 (1493-1605)||(22997337-22997448)
chr6 (1493-1605)||(23790953-23791064)
chr6 (1563-1608)||(607185-607230)
chr6 (1493-1561)||(3709905-3709971)
chr6 (1563-1608)||(3794200-3794245)
chr6 (1540-1608)||(6210052-6210121)
chr6 (1563-1608)||(7207842-7207887)
chr6 (1563-1608)||(9246409-9246454)
chr6 (1563-1608)||(10934597-10934642)
chr6 (1563-1608)||(17441866-17441911)
chr6 (1493-1611)||(18904259-18904377)
chr6 (1563-1608)||(19953855-19953900)
chr6 (1556-1609)||(20568305-20568358)
chr6 (1556-1613)||(23610339-23610396)
chr6 (1563-1604)||(28237279-28237320)
chr6 (1540-1608)||(30885573-30885642)
chr6 (1563-1608)||(33573815-33573860)
[»] chr7 (42 HSPs)
chr7 (1284-1414)||(22802504-22802636)
chr7 (1245-1414)||(22868969-22869141)
chr7 (1542-1608)||(15694548-15694614)
chr7 (1542-1608)||(15701528-15701594)
chr7 (1532-1608)||(3392465-3392542)
chr7 (1552-1609)||(40518905-40518962)
chr7 (1540-1608)||(47641043-47641112)
chr7 (1557-1608)||(27424837-27424888)
chr7 (1557-1608)||(37300120-37300171)
chr7 (1557-1608)||(38889514-38889565)
chr7 (1532-1605)||(9712193-9712267)
chr7 (1493-1598)||(28799978-28800083)
chr7 (1563-1608)||(3766809-3766854)
chr7 (1559-1608)||(10244912-10244961)
chr7 (1561-1606)||(18223742-18223787)
chr7 (1540-1608)||(25833553-25833622)
chr7 (1559-1608)||(47999778-47999827)
chr7 (1563-1611)||(5833034-5833082)
chr7 (1552-1608)||(12615749-12615805)
chr7 (1503-1589)||(18503448-18503533)
chr7 (1557-1608)||(2228973-2229024)
chr7 (1557-1608)||(9877288-9877339)
chr7 (1557-1608)||(15238887-15238938)
chr7 (1557-1608)||(19752989-19753040)
chr7 (1557-1608)||(21066884-21066935)
chr7 (1557-1608)||(23102579-23102630)
chr7 (1563-1610)||(26816685-26816732)
chr7 (1563-1606)||(42798343-42798386)
chr7 (1556-1606)||(24062031-24062081)
chr7 (1563-1605)||(48288428-48288470)
chr7 (1563-1608)||(2681094-2681139)
chr7 (1563-1608)||(12640616-12640661)
chr7 (1563-1608)||(15106718-15106763)
chr7 (1563-1608)||(29617403-29617448)
chr7 (1563-1604)||(29625923-29625964)
chr7 (1493-1604)||(30388465-30388575)
chr7 (1559-1608)||(32619348-32619397)
chr7 (1563-1608)||(35950126-35950171)
chr7 (1556-1605)||(41084040-41084089)
chr7 (1556-1605)||(42182218-42182267)
chr7 (1563-1608)||(42443687-42443732)
chr7 (1563-1608)||(44616600-44616645)
[»] chr8 (50 HSPs)
chr8 (1492-1608)||(39362263-39362379)
chr8 (1517-1604)||(22437771-22437858)
chr8 (1516-1606)||(34472297-34472388)
chr8 (1493-1604)||(41458297-41458406)
chr8 (1540-1608)||(16449123-16449192)
chr8 (1559-1608)||(42880946-42880995)
chr8 (1552-1608)||(7388453-7388509)
chr8 (1552-1604)||(8698596-8698648)
chr8 (1517-1605)||(22202714-22202802)
chr8 (1556-1608)||(33617970-33618022)
chr8 (1552-1608)||(38402249-38402305)
chr8 (1556-1608)||(43656034-43656086)
chr8 (1557-1608)||(8034433-8034484)
chr8 (1493-1605)||(10083164-10083274)
chr8 (1493-1609)||(13059135-13059250)
chr8 (1563-1608)||(37717361-37717406)
chr8 (1493-1604)||(38344051-38344161)
chr8 (1556-1608)||(12245-12297)
chr8 (1556-1608)||(8265266-8265318)
chr8 (1516-1608)||(32719587-32719679)
chr8 (1556-1608)||(36540285-36540337)
chr8 (1552-1603)||(197080-197131)
chr8 (1552-1603)||(311917-311968)
chr8 (1557-1608)||(23178912-23178963)
chr8 (1557-1608)||(24458315-24458366)
chr8 (1557-1608)||(26022245-26022296)
chr8 (1557-1608)||(35939485-35939536)
chr8 (1557-1608)||(38955215-38955266)
chr8 (1557-1608)||(41689880-41689931)
chr8 (1563-1605)||(13406601-13406643)
chr8 (1563-1605)||(31450984-31451026)
chr8 (1557-1607)||(43856403-43856453)
chr8 (1563-1608)||(94538-94583)
chr8 (1517-1609)||(481008-481101)
chr8 (1563-1608)||(1937308-1937353)
chr8 (1563-1604)||(8953896-8953937)
chr8 (1493-1608)||(10568083-10568197)
chr8 (1563-1608)||(10736901-10736946)
chr8 (1563-1608)||(11875884-11875929)
chr8 (1563-1608)||(11890891-11890936)
chr8 (1563-1608)||(17027907-17027952)
chr8 (1563-1608)||(17558343-17558388)
chr8 (1563-1608)||(17698520-17698565)
chr8 (1557-1606)||(23339917-23339966)
chr8 (1552-1605)||(24296884-24296937)
chr8 (1571-1608)||(26280819-26280856)
chr8 (1563-1608)||(29716858-29716903)
chr8 (1563-1608)||(30972844-30972889)
chr8 (1563-1608)||(34413060-34413105)
chr8 (1493-1608)||(34894367-34894481)
[»] chr2 (40 HSPs)
chr2 (1516-1606)||(2806481-2806571)
chr2 (1557-1609)||(43214353-43214405)
chr2 (1554-1608)||(5062295-5062349)
chr2 (1493-1605)||(29772236-29772347)
chr2 (1493-1538)||(32221036-32221081)
chr2 (1556-1605)||(40363091-40363140)
chr2 (1552-1608)||(24581480-24581536)
chr2 (1557-1608)||(33669734-33669785)
chr2 (1493-1601)||(15939294-15939401)
chr2 (1556-1609)||(23405193-23405246)
chr2 (1493-1603)||(23919436-23919544)
chr2 (1493-1608)||(33228891-33229005)
chr2 (1563-1608)||(39408717-39408762)
chr2 (1552-1604)||(15764932-15764984)
chr2 (1552-1608)||(35798042-35798098)
chr2 (1553-1609)||(41566759-41566815)
chr2 (1557-1608)||(3287077-3287128)
chr2 (1557-1608)||(8250322-8250373)
chr2 (1560-1603)||(32168931-32168974)
chr2 (1540-1598)||(36089128-36089187)
chr2 (1557-1608)||(38400308-38400359)
chr2 (1554-1608)||(16904771-16904825)
chr2 (1563-1605)||(32609214-32609256)
chr2 (1557-1607)||(34613978-34614028)
chr2 (1558-1608)||(43146350-43146400)
chr2 (1558-1608)||(44948594-44948644)
chr2 (1559-1608)||(1260183-1260232)
chr2 (1563-1608)||(3446728-3446773)
chr2 (1563-1608)||(4183174-4183219)
chr2 (1563-1608)||(7379627-7379672)
chr2 (1563-1608)||(18694783-18694828)
chr2 (1563-1608)||(19281606-19281651)
chr2 (1563-1608)||(19684071-19684116)
chr2 (1563-1608)||(22653671-22653716)
chr2 (1563-1608)||(25857322-25857367)
chr2 (1493-1608)||(28194630-28194744)
chr2 (1563-1608)||(30932473-30932518)
chr2 (1563-1608)||(33041890-33041935)
chr2 (1563-1608)||(33233249-33233294)
chr2 (1493-1608)||(40473508-40473622)
[»] chr4 (53 HSPs)
chr4 (1493-1608)||(40051620-40051734)
chr4 (1542-1603)||(35851707-35851768)
chr4 (1493-1608)||(3036013-3036127)
chr4 (1552-1608)||(31852629-31852685)
chr4 (1532-1604)||(56479222-56479294)
chr4 (1532-1591)||(46903346-46903405)
chr4 (1532-1605)||(13578460-13578534)
chr4 (1542-1604)||(39696343-39696405)
chr4 (1552-1606)||(40994119-40994173)
chr4 (1492-1607)||(42002305-42002418)
chr4 (1552-1609)||(4931887-4931944)
chr4 (1493-1608)||(10402439-10402553)
chr4 (1540-1608)||(48569179-48569248)
chr4 (1563-1608)||(52798276-52798321)
chr4 (1492-1606)||(624480-624593)
chr4 (1557-1609)||(33933760-33933812)
chr4 (1552-1604)||(37310029-37310081)
chr4 (1552-1608)||(37935859-37935915)
chr4 (1556-1608)||(39023173-39023225)
chr4 (1552-1608)||(45673650-45673706)
chr4 (1552-1608)||(52757294-52757350)
chr4 (1557-1608)||(5165855-5165906)
chr4 (1557-1608)||(8965092-8965143)
chr4 (1557-1608)||(24680107-24680158)
chr4 (1557-1608)||(49901480-49901531)
chr4 (1509-1568)||(54215800-54215859)
chr4 (1493-1605)||(3784913-3785022)
chr4 (1556-1606)||(18424917-18424967)
chr4 (1542-1608)||(26868347-26868413)
chr4 (1570-1608)||(37251111-37251149)
chr4 (1563-1613)||(42845015-42845065)
chr4 (1556-1606)||(43978008-43978058)
chr4 (1540-1608)||(3764011-3764080)
chr4 (1563-1608)||(3847679-3847724)
chr4 (1563-1608)||(6371112-6371157)
chr4 (1541-1605)||(8282343-8282408)
chr4 (1563-1608)||(9761113-9761158)
chr4 (1542-1606)||(11826454-11826519)
chr4 (1560-1609)||(13984660-13984709)
chr4 (1559-1608)||(15208520-15208569)
chr4 (1557-1606)||(22788695-22788744)
chr4 (1540-1608)||(25235800-25235869)
chr4 (1557-1610)||(26250643-26250696)
chr4 (1563-1608)||(26919495-26919540)
chr4 (1563-1608)||(43147411-43147456)
chr4 (1563-1608)||(43207667-43207712)
chr4 (1563-1608)||(43596893-43596938)
chr4 (1536-1608)||(44602483-44602556)
chr4 (1563-1608)||(45112138-45112183)
chr4 (1563-1608)||(46105533-46105578)
chr4 (1563-1608)||(46775057-46775102)
chr4 (1493-1607)||(51890796-51890908)
chr4 (1563-1608)||(55251378-55251423)
[»] chr3 (56 HSPs)
chr3 (1517-1607)||(52309090-52309181)
chr3 (1493-1608)||(34898725-34898839)
chr3 (1493-1608)||(48739702-48739816)
chr3 (1493-1610)||(25883946-25884063)
chr3 (1557-1608)||(53163592-53163643)
chr3 (1554-1608)||(39966092-39966146)
chr3 (1540-1608)||(19999865-19999934)
chr3 (1540-1608)||(22501934-22502003)
chr3 (1563-1608)||(52974080-52974125)
chr3 (1563-1603)||(552174-552214)
chr3 (1552-1608)||(3748618-3748674)
chr3 (1517-1612)||(19222566-19222662)
chr3 (1515-1602)||(29559652-29559740)
chr3 (1556-1608)||(34847541-34847593)
chr3 (1492-1606)||(47098732-47098845)
chr3 (1556-1608)||(52945893-52945945)
chr3 (1557-1608)||(1743818-1743869)
chr3 (1557-1604)||(17602697-17602744)
chr3 (1557-1608)||(17608340-17608391)
chr3 (1493-1609)||(24303387-24303501)
chr3 (1557-1608)||(28550340-28550391)
chr3 (1493-1609)||(46844930-46845044)
chr3 (1493-1609)||(48515344-48515458)
chr3 (1557-1608)||(53752721-53752772)
chr3 (1560-1606)||(12894554-12894600)
chr3 (1492-1608)||(32256511-32256626)
chr3 (1493-1609)||(34102062-34102180)
chr3 (1558-1608)||(53347312-53347362)
chr3 (1561-1611)||(53633636-53633686)
chr3 (1563-1608)||(882387-882432)
chr3 (1563-1608)||(2522924-2522969)
chr3 (1532-1609)||(4236975-4237052)
chr3 (1563-1608)||(7269953-7269998)
chr3 (1563-1608)||(7920318-7920363)
chr3 (1515-1603)||(7938274-7938363)
chr3 (1559-1608)||(11820002-11820051)
chr3 (1540-1608)||(13638248-13638317)
chr3 (1563-1608)||(19550504-19550549)
chr3 (1571-1608)||(21405161-21405198)
chr3 (1563-1608)||(22472341-22472386)
chr3 (1557-1606)||(29373470-29373519)
chr3 (1563-1608)||(31327528-31327573)
chr3 (1563-1608)||(31327745-31327790)
chr3 (1493-1608)||(34102569-34102683)
chr3 (1557-1610)||(36763425-36763478)
chr3 (1563-1608)||(37800638-37800683)
chr3 (1563-1608)||(40192154-40192199)
chr3 (1563-1608)||(40548301-40548346)
chr3 (1563-1608)||(40933858-40933903)
chr3 (1493-1608)||(41936365-41936479)
chr3 (1563-1608)||(44364019-44364064)
chr3 (1563-1608)||(44652009-44652054)
chr3 (1563-1608)||(45701342-45701387)
chr3 (1563-1608)||(50496841-50496886)
chr3 (1563-1608)||(52410268-52410313)
chr3 (1493-1608)||(53432695-53432809)
[»] chr5 (31 HSPs)
chr5 (1542-1608)||(5900290-5900356)
chr5 (1517-1609)||(3198324-3198417)
chr5 (1552-1605)||(10241726-10241779)
chr5 (1552-1604)||(2362971-2363023)
chr5 (1557-1608)||(12891555-12891606)
chr5 (1557-1608)||(26912831-26912882)
chr5 (1556-1605)||(546803-546852)
chr5 (1493-1608)||(8241048-8241162)
chr5 (1563-1608)||(40091475-40091520)
chr5 (1556-1608)||(33736034-33736086)
chr5 (1557-1608)||(17545193-17545244)
chr5 (1493-1606)||(41930105-41930217)
chr5 (1542-1608)||(1743125-1743191)
chr5 (1558-1604)||(6414070-6414116)
chr5 (1493-1605)||(11786018-11786129)
chr5 (1563-1613)||(16603391-16603441)
chr5 (1563-1608)||(4417712-4417757)
chr5 (1563-1608)||(6518803-6518848)
chr5 (1493-1608)||(9125661-9125773)
chr5 (1563-1608)||(9835031-9835076)
chr5 (1563-1608)||(11897246-11897291)
chr5 (1563-1608)||(12463754-12463799)
chr5 (1552-1613)||(19891442-19891503)
chr5 (1563-1608)||(21918050-21918095)
chr5 (1563-1608)||(21962132-21962177)
chr5 (1563-1608)||(27765255-27765300)
chr5 (1559-1608)||(31074150-31074199)
chr5 (1563-1608)||(32505686-32505731)
chr5 (1559-1608)||(39886235-39886284)
chr5 (1563-1608)||(41179830-41179875)
chr5 (1563-1608)||(42320315-42320360)
[»] chr1 (41 HSPs)
chr1 (1493-1608)||(48638530-48638644)
chr1 (1557-1608)||(42054331-42054382)
chr1 (1556-1606)||(4865842-4865892)
chr1 (1552-1606)||(15390220-15390274)
chr1 (1558-1604)||(47478870-47478916)
chr1 (1517-1613)||(1247248-1247345)
chr1 (1493-1608)||(21265654-21265768)
chr1 (1563-1608)||(26550492-26550537)
chr1 (1532-1608)||(42490405-42490482)
chr1 (1563-1608)||(44732631-44732676)
chr1 (1517-1609)||(47469053-47469146)
chr1 (1552-1608)||(3269617-3269673)
chr1 (1559-1603)||(3694938-3694982)
chr1 (1552-1608)||(7166243-7166299)
chr1 (1556-1608)||(8865852-8865904)
chr1 (1556-1608)||(35605643-35605695)
chr1 (1557-1608)||(22563384-22563435)
chr1 (1557-1608)||(33207203-33207254)
chr1 (1563-1605)||(8984532-8984574)
chr1 (1556-1606)||(9866204-9866254)
chr1 (1540-1605)||(11215002-11215068)
chr1 (1563-1608)||(1570219-1570264)
chr1 (1540-1608)||(2556554-2556623)
chr1 (1563-1608)||(4482625-4482670)
chr1 (1563-1608)||(6438091-6438136)
chr1 (1563-1608)||(6702574-6702619)
chr1 (1563-1608)||(10664821-10664866)
chr1 (1563-1608)||(15819628-15819673)
chr1 (1540-1608)||(18467201-18467270)
chr1 (1563-1608)||(25999848-25999893)
chr1 (1563-1608)||(26584773-26584818)
chr1 (1561-1610)||(30678832-30678881)
chr1 (1563-1608)||(32594249-32594294)
chr1 (1563-1608)||(33254726-33254771)
chr1 (1563-1608)||(33274898-33274943)
chr1 (1493-1604)||(37662515-37662625)
chr1 (1563-1608)||(40519571-40519616)
chr1 (1540-1608)||(45333715-45333783)
chr1 (1563-1608)||(46965738-46965783)
chr1 (1563-1608)||(50899537-50899582)
chr1 (1540-1608)||(51050188-51050257)
[»] scaffold0288 (1 HSPs)
scaffold0288 (1540-1607)||(21263-21331)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1555-1606)||(50020-50071)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1552-1603)||(65803-65854)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1540-1608)||(46524-46593)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1493-1608)||(10784-10898)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1563-1608)||(112106-112151)
[»] scaffold0690 (1 HSPs)
scaffold0690 (1563-1606)||(3666-3709)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1559-1605)||(6769-6815)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1563-1608)||(47-92)
[»] scaffold0608 (1 HSPs)
scaffold0608 (1563-1608)||(8964-9009)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1563-1608)||(4041-4086)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1563-1608)||(17618-17663)
[»] scaffold0063 (1 HSPs)
scaffold0063 (1557-1606)||(56323-56372)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1563-1604)||(37441-37482)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1563-1608)||(59781-59826)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1563-1608)||(266724-266769)


Alignment Details
Target: chr6 (Bit Score: 529; Significance: 0; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 15 - 743
Target Start/End: Complemental strand, 4327287 - 4326537
Alignment:
Q  15 ttcttgaaggatacttggttgactattatgttgttgnnnnnnngacaaatagttgactattatgttaagtgagcgtgatatatctcctgccatgaattta 114  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4327287 ttcttgaaggatacttggttgactattatgttgttgtttttttgacaaatagttgactattatgttaagtgagcgttatatatctcctgccatgaattta 4327188  T
Q  115 agaagnnnnnnnnnnntactaaacaaataactcagttataatatgagaaaaggggacatggacggtcatgtaaactacaactagttttacatt-atgttc 213  Q
    |||||           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| |    
T  4327187 agaagaagaaaaaaaatactaaacaaataactcagttataatatgagaaaaggggacatggacagtcatgtaaactacaactagttttatattgatgtcc 4327088  T
Q  214 aataagaatgaagaatttgatagttcnnnnnnngaatgaaaaccgatacaatatattttttagatgttaatcctccgatttcaagctcactatttgtggg 313  Q
    ||||||||||||||||||||||||||       |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  4327087 aataagaatgaagaatttgatagttcaaaaaaagaatgaaaacctttactatatattttttagatgttaatcctccgatttcaagctcactatttgtgg- 4326989  T
Q  314 aagatgtcgtatactttgaggctgccgtggcggtggtggaatgtgattgttagagaagagtttcaaatggagactaaatcgtgtccctcacatccgaaca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  4326988 aagatgtcgtatactttgaggctgccgtggcggtggtggaatgtgattgttagagaagagtttcaaatggagactaaatcatgtccctcacatccgaata 4326889  T
Q  414 tttgtctgaaactcttctctaccaaccacatttcaccaccatcttcgctccctccgattatgcctcgaacaaatccagttgaccgtcaccatcagcccta 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4326888 tttgtctgaaactcttctctaccaaccacatttcaccaccatcttcgctccctccgattatgcctcgaacaaatccagttgaccgtcaccatcagcccta 4326789  T
Q  514 agtttggaagaaatttata--------------------ttgacaaattaaactatccctatacaaaaatacattatgttctcgtgcacaatttataaaa 593  Q
    ||||||||| |||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4326788 agtttggaacaaatttatattcacacacttctctagaatttgacaaattaaactatccctatacaaaaatacattatgttctcgtgcacaatttataaaa 4326689  T
Q  594 gtgaagatgattcttatttggtgattgcctaagccctaaacga--tgtgtgtgtatatagaggagtggtattcgtatctcttgtatatttggatttggat 691  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||   ||||| ||||||    
T  4326688 gtgaagatgattcttatttggtgattgcctaagccctaaacgatgtgtgtgtgtatatagaggagtggtattcgtatctcttgtagtattggaattggat 4326589  T
Q  692 aacacttgttattagtttgttatatcataacttgtgacgcaagttttgcatg 743  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4326588 aacacttgttattagtttgttatatcataacttgtgacgcaagttttgcatg 4326537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1298 - 1615
Target Start/End: Complemental strand, 4326536 - 4326206
Alignment:
Q  1298 gtagattttattgctgatgttacttagttttaacatgctgtggagaaattatggacttgtgatgcttgggaataaattctcgtgcatagttg-------- 1389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  4326536 gtagattttattgctgatgttacttagttttaacatgctgtggagaaattatggacttgtgatgcttgggaataaattctcgtgcatagttgttgtgcat 4326437  T
Q  1390 -----atatgtttggctatgatggatatattctattctaaattatttcccgtctaataagactgcaatggatggtaaaattatccttcaaaagacttaac 1484  Q
         |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||| |||||||||    
T  4326436 agttgatatgtttggctatgatggatatattctattctaaattattttccgtctaataagaccgcaatgggtggtaaaattctccttcaagagacttaac 4326337  T
Q  1485 actcggattagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatccctt 1584  Q
    |||      ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4326336 actaatccgagtggctagagctcacacattttttaaatgttgaaaagtggggtggctggggttcgaacccaacccctacatatattatgcaatatccctt 4326237  T
Q  1585 ccaactgggttaagctcacggggacaacact 1615  Q
    |||||||||||||||||||||||||||||||    
T  4326236 ccaactgggttaagctcacggggacaacact 4326206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 27094823 - 27094879
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  27094823 cccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 27094879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1493 - 1607
Target Start/End: Complemental strand, 2251951 - 2251837
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||  |||||||||||||||| |||||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  2251951 tagtggccagagctcacacattttt-aaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatatagtatgcaatatccctaccaactg 2251853  T
Q  1592 ggttaagctcacgggg 1607  Q
     | |||||||||||||    
T  2251852 agctaagctcacgggg 2251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 4330795 - 4330722
Alignment:
Q  135 aaacaaataactcagttataatatgagaaaaggggacatggacggtcatgtaa--actacaactagttttacat 206  Q
    ||||||||| |||| ||||| |||||||||||||||||||||| |||| ||||  |||| ||||||||||||||    
T  4330795 aaacaaatagctcatttatagtatgagaaaaggggacatggaccgtcacgtaaacactataactagttttacat 4330722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 4661163 - 4661094
Alignment:
Q  1540 ctggggttc-aaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| ||||||  | ||||||||||||||    
T  4661163 ctggggttcgaaacccaacccctgcatataatatgcaatatccctaccaactaagctaagctcacgggga 4661094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1568
Target Start/End: Original strand, 32141994 - 32142068
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttc-aaacccaacccctacatata 1568  Q
    ||||||||||||||||||||  |||||||||| ||||| ||||||| ||||||||| || |||| ||||||||||||    
T  32141994 tagtggctggagctcacaca--ttttaaatgtggaaaagtggggtgtctggggttcgaaccccagcccctacatata 32142068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1053 - 1132
Target Start/End: Complemental strand, 4328616 - 4328538
Alignment:
Q  1053 atttagagcacacttaagactcccaaatgattaaactgcatacactaaagttagagatcaaacctctatgcttaaaagac 1132  Q
    ||||||| ||||||||| |||| ||| |||| ||| ||  |||||||||||||||||||||||||||||| |||| ||||    
T  4328616 atttagaacacacttaa-actctcaactgataaaattgtgtacactaaagttagagatcaaacctctatgtttaagagac 4328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 680 - 714
Target Start/End: Complemental strand, 4330038 - 4330004
Alignment:
Q  680 ttggatttggataacacttgttattagtttgttat 714  Q
    |||||||||||||||||||||||||||||||||||    
T  4330038 ttggatttggataacacttgttattagtttgttat 4330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1543 - 1598
Target Start/End: Complemental strand, 8374461 - 8374404
Alignment:
Q  1543 gggttcaaaccc--aacccctacatatattatgcaatatcccttccaactgggttaag 1598  Q
    ||||||||||||  |||||||||||||||||||||||||| || ||||||| ||||||    
T  8374461 gggttcaaaccctcaacccctacatatattatgcaatatctctaccaactgagttaag 8374404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1563 - 1613
Target Start/End: Complemental strand, 31802096 - 31802046
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    |||||| |||||||||||||| ||||||| |||||||||||||||| ||||    
T  31802096 catataatatgcaatatccctaccaactgagttaagctcacggggataaca 31802046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 937 - 1116
Target Start/End: Complemental strand, 4332014 - 4331835
Alignment:
Q  937 agtatcttatttccttgttgagtttgtagattactaagttatagtaagaaccaaactcaatattttgtgttttttaggtgcttttgcatgcaatcacaaa 1036  Q
    |||| ||| ||| ||| |||||||||||||||||||  | ||||| ||||||||||||||  || ||||||||    ||  |||||   ||| | || ||    
T  4332014 agtaccttgttttcttattgagtttgtagattactagatgatagtgagaaccaaactcaagtttatgtgtttta---gtatttttgtgcgcagttaccaa 4331918  T
Q  1037 aactaatctcattaca-atttagagcacacttaagactccc--aaatgattaaactgcatacactaaagttagagatcaaacc 1116  Q
     ||||||||||||||| |||||||||| ||||||||||| |  |||| || ||| ||  ||| ||||||||||||||||||||    
T  4331917 gactaatctcattacatatttagagcatacttaagactctctcaaataataaaattgattacgctaaagttagagatcaaacc 4331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 7177407 - 7177293
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||  | ||||| ||| || || ||||||| ||||||||| ||||| | ||||| ||||||  || |||||||||| |||||||    
T  7177407 tagtggctagagctcacac--tgtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatacaatatccctaccaactg 7177310  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  7177309 agctaagctcacgggga 7177293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 13732855 - 13732810
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  13732855 catataatatgcaatatccctaccaactgagttaagctcacgggga 13732810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 4408412 - 4408356
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  4408412 cccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 4408356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Original strand, 9372221 - 9372273
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9372221 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 9372273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 9435680 - 9435624
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9435680 cccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 9435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Original strand, 19892296 - 19892348
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||| |||||||||||||| |||||||   ||||||||||||||    
T  19892296 acccctacatataatatgcaatatccctaccaactgaactaagctcacgggga 19892348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 31705949 - 31705897
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||||| ||||||||||| | ||||||| | ||||||||||||||    
T  31705949 acccctacatatataatgcaatatccataccaactgagctaagctcacgggga 31705897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 7545378 - 7545327
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7545378 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 7545327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 7865376 - 7865427
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7865376 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 7865427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 15091497 - 15091446
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  15091497 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 15091446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1558 - 1609
Target Start/End: Complemental strand, 30938436 - 30938385
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||| ||||||||||||||| ||||| ||||||| |||||||||||| ||||    
T  30938436 ccctgcatatattatgcaatgtccctaccaactgagttaagctcacgtggac 30938385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1532 - 1605
Target Start/End: Complemental strand, 3294839 - 3294765
Alignment:
Q  1532 tggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||| | ||||||| |||||  |||||| |||||| |||||||||||||| ||||||| | |||||||||||    
T  3294839 tggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 3294765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1496 - 1591
Target Start/End: Complemental strand, 5695022 - 5694929
Alignment:
Q  1496 tggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaac-ccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||||||||||||||||   ||||| || || ||||||| | | ||||||||| || |||||| |||||| ||| |||||||||| |||||||    
T  5695022 tggctggagctcacacatttt---aatgtggagaagtggggtgtccgaggttcaaactcctacccctgcatataatatacaatatccctaccaactg 5694929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Complemental strand, 8439725 - 8439675
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||    
T  8439725 acccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 8439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Complemental strand, 22997448 - 22997337
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || | ||||| | ||||||| |||||  ||||||||||||| ||| |||||||||| |||||||    
T  22997448 tagtggctagagctcacacaattt--aattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctaccaactg 22997351  T
Q  1592 ggttaagctcacgg 1605  Q
     | |||||||||||    
T  22997350 agctaagctcacgg 22997337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Original strand, 23790953 - 23791064
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || | ||||| | ||||||| |||||  ||||||||||||| ||| |||||||||| |||||||    
T  23790953 tagtggctagagctcacacaattt--aattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctaccaactg 23791050  T
Q  1592 ggttaagctcacgg 1605  Q
     | |||||||||||    
T  23791051 agctaagctcacgg 23791064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 607230 - 607185
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  607230 catataatatgcaatatccctaccaactgagctaagctcacgggga 607185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1561
Target Start/End: Complemental strand, 3709971 - 3709905
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaacccct 1561  Q
    ||||||||||||||| ||||  |||||||||| || || ||||||| ||||||||| ||||| ||||||    
T  3709971 tagtggctggagctctcaca--ttttaaatgtggagaagtggggtgtctggggttcgaaccccacccct 3709905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 3794200 - 3794245
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  3794200 catataatatgcaatatccctaccaactgagctaagctcacgggga 3794245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 6210121 - 6210052
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | |||| |||||||||    
T  6210121 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagttcacgggga 6210052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 7207887 - 7207842
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7207887 catataatatgcaatatccctaccaactgagctaagctcacgggga 7207842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 9246409 - 9246454
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9246409 catataatatgcaatatccctaccaactgagctaagctcacgggga 9246454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 10934642 - 10934597
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  10934642 catataatatgcaatatccctaccaactgagctaagctcacgggga 10934597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 17441866 - 17441911
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17441866 catataatatgcaatatccctaccaactgagctaagctcacgggga 17441911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1611
Target Start/End: Complemental strand, 18904377 - 18904259
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttc-aaacccaacccctacatatattatgca-atatcccttccaact 1590  Q
    ||||||||||||||||||||  |||||||||| || || ||||||| | ||||||| || ||| |||||| ||||||  |||||  | ||||| ||||||    
T  18904377 tagtggctggagctcacaca--ttttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataaaatgcatttgtccctaccaact 18904280  T
Q  1591 gggttaagctcacggggacaa 1611  Q
    | |  ||||||||||||||||    
T  18904279 gagcaaagctcacggggacaa 18904259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 19953855 - 19953900
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19953855 catataatatgcaatatccctaccaactgagctaagctcacgggga 19953900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1556 - 1609
Target Start/End: Original strand, 20568305 - 20568358
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||| ||||||||||||||| ||| | ||||||| | |||||||||||||||    
T  20568305 acccctgcatatattatgcaatgtccttaccaactgagctaagctcacggggac 20568358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1556 - 1613
Target Start/End: Original strand, 23610339 - 23610396
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    |||||| |||| |||||||||| ||||| ||||||| | ||||||||||| |||||||    
T  23610339 acccctgcataaattatgcaatgtccctaccaactgagctaagctcacggagacaaca 23610396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1604
Target Start/End: Original strand, 28237279 - 28237320
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  28237279 catataatatgcaatatccctaccaactgagttaagctcacg 28237320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 30885573 - 30885642
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | |||||  ||||| |||||||||||||| ||||||| | ||||||||||||||    
T  30885573 ctggggttcgaaccccagcccctgtatataatatgcaatatccctaccaactgagctaagctcacgggga 30885642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 33573860 - 33573815
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  33573860 catataatatgcaatatccctaccaactgagctaagctcacgggga 33573815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 2e-28; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1284 - 1414
Target Start/End: Original strand, 22802504 - 22802636
Alignment:
Q  1284 ctgaagttcaaagtgtagattttattgctgatgtt--acttagttttaacatgctgtggagaaattatggacttgtgatgcttgggaataaattctcgtg 1381  Q
    |||||||||||||||||| || |||||||||||||  ||| | |||||||||||||  || ||||||||||||||||||||||||||||||| | |  ||    
T  22802504 ctgaagttcaaagtgtaggttctattgctgatgttgcactaaattttaacatgctggtgaaaaattatggacttgtgatgcttgggaataaaattttatg 22802603  T
Q  1382 catagttgatatgtttggctatgatggatatat 1414  Q
    ||||||||||| ||||| | |||||||||||||    
T  22802604 catagttgataagtttgaccatgatggatatat 22802636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1245 - 1414
Target Start/End: Original strand, 22868969 - 22869141
Alignment:
Q  1245 ctaacctcccttgggatcacaccagactaggctgc-tattctgaagttcaaagtgtagattttattgctgatgtt--acttagttttaacatgctgtgga 1341  Q
    |||| ||||||||| |||| ||||||| | ||||| | | | |||||||||||||||| ||||||| ||||||||  ||| | ||| |||||||||  ||    
T  22868969 ctaatctcccttggaatcaaaccagaccaagctgcctgtgccgaagttcaaagtgtaggttttatttctgatgttgcactaaatttgaacatgctggtga 22869068  T
Q  1342 gaaattatggacttgtgatgcttgggaataaattctcgtgcatagttgatatgtttggctatgatggatatat 1414  Q
     |||||||||||||||||||||||||||||||   |  ||||||||||||| ||||| | |||||||||||||    
T  22869069 aaaattatggacttgtgatgcttgggaataaaaatttatgcatagttgataagtttgaccatgatggatatat 22869141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1542 - 1608
Target Start/End: Complemental strand, 15694614 - 15694548
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||||| ||||| |||||| ||| |||||||||| |||||||  |||||||||||||||    
T  15694614 ggggttcaaacccagcccctgcatataatatacaatatccctaccaactgaattaagctcacgggga 15694548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1542 - 1608
Target Start/End: Complemental strand, 15701594 - 15701528
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||||| ||||| |||||| ||| |||||||||| |||||||  |||||||||||||||    
T  15701594 ggggttcaaacccagcccctgcatataatatacaatatccctaccaactgaattaagctcacgggga 15701528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1532 - 1608
Target Start/End: Complemental strand, 3392542 - 3392465
Alignment:
Q  1532 tggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||| ||||||||| |||||  ||||||||||||| |||||||||||| |  |||||| ||||||||||||||||    
T  3392542 tggggtgtctggggttcgaaccccgacccctacatataatatgcaatatccatatcaactgagttaagctcacgggga 3392465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1552 - 1609
Target Start/End: Original strand, 40518905 - 40518962
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||||||||||||||||||||| ||||| ||||||| | |||| ||||||||||    
T  40518905 cccaacccctacatatattatgcaatgtccctaccaactgagctaagttcacggggac 40518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 47641112 - 47641043
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | |||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  47641112 ctggggttcgaaccccagcccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 47641043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 27424888 - 27424837
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||||||||||| | ||||||||||||||    
T  27424888 cccctgcatataatatgcaatatcccttccaactgagctaagctcacgggga 27424837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 37300120 - 37300171
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  37300120 cccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 37300171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 38889514 - 38889565
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  38889514 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 38889565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1532 - 1605
Target Start/End: Original strand, 9712193 - 9712267
Alignment:
Q  1532 tggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||| | ||||||| |||||  |||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  9712193 tggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 9712267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1493 - 1598
Target Start/End: Original strand, 28799978 - 28800083
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaa-cccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||| ||||||||||||| ||||||||||| || || ||||||| | |||||||||| |||  ||||| |||| |||||||| | ||||| |||||||    
T  28799978 tagtggttggagctcacaca-tttttaaatgtagagaagtggggtgtcaggggttcaaacccctgcccctgcataaattatgcattgtccctaccaactg 28800076  T
Q  1592 ggttaag 1598  Q
     ||||||    
T  28800077 agttaag 28800083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 3766854 - 3766809
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  3766854 catataatatgcaatatccctaccaactgagttaagctcacgggga 3766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Original strand, 10244912 - 10244961
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  10244912 cctacatataatatgcaatatccctaccaactgagctaagctcacgggga 10244961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1561 - 1606
Target Start/End: Original strand, 18223742 - 18223787
Alignment:
Q  1561 tacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||    
T  18223742 tacatataatatgcaatatccctaccaactgagttaagctcacggg 18223787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 25833622 - 25833553
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  25833622 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 25833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 47999827 - 47999778
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  47999827 cctacatataatatgcaatatccctaccaactgagctaagctcacgggga 47999778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1563 - 1611
Target Start/End: Complemental strand, 5833082 - 5833034
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggggacaa 1611  Q
    ||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  5833082 catatattatgcattatccctaccaactgagctaagctcacggggacaa 5833034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 12615805 - 12615749
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| ||||||||||||||  |||||| |||||||||| |||||    
T  12615805 cccaacccctgcatataatatgcaatatccctatcaactgagttaagctcaagggga 12615749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1503 - 1589
Target Start/End: Original strand, 18503448 - 18503533
Alignment:
Q  1503 agctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaac 1589  Q
    ||||||||||||||  |||||| || || ||||||| ||||||||| |||| || ||||| |||||| ||||||||||| ||||||||    
T  18503448 agctcacacatttt--aaatgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaatatctcttccaac 18503533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 2229024 - 2228973
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  2229024 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 2228973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 9877288 - 9877339
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9877288 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 9877339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 15238938 - 15238887
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  15238938 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 15238887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 19752989 - 19753040
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19752989 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 19753040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 21066935 - 21066884
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| ||||||| | ||| ||||||||||    
T  21066935 cccctacatataatatgcaatatccctaccaactgagctaaactcacgggga 21066884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 23102579 - 23102630
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  23102579 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 23102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1563 - 1610
Target Start/End: Original strand, 26816685 - 26816732
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggggaca 1610  Q
    ||||||||||||| ||||||| ||||||| | ||||||||||||||||    
T  26816685 catatattatgcattatccctaccaactgagctaagctcacggggaca 26816732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1563 - 1606
Target Start/End: Original strand, 42798343 - 42798386
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||||||||||| | ||||||||||||||||||||    
T  42798343 catataatatgcaatatccctacaaactgggttaagctcacggg 42798386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Original strand, 24062031 - 24062081
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||||||||||| |||||||||||||| | ||||| | ||||||||||||    
T  24062031 acccctacatataatatgcaatatccctactaactgagctaagctcacggg 24062081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1605
Target Start/End: Original strand, 48288428 - 48288470
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  48288428 catataatatgcaatatccctaccaactgagttaagctcacgg 48288470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 2681139 - 2681094
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  2681139 catataatatgcaatatccctaccaactgagctaagctcacgggga 2681094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 12640616 - 12640661
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  12640616 catataatatgcaatatccctaccaactgagctaagctcacgggga 12640661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 15106718 - 15106763
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  15106718 catataatatgcaatatccctaccaactgagttaagctcaccggga 15106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 29617448 - 29617403
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  29617448 catataatatgcaatatccctaccaactgagctaagctcacgggga 29617403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1604
Target Start/End: Complemental strand, 29625964 - 29625923
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  29625964 catataatatgcaatatccctaccaactgagttaagctcacg 29625923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1604
Target Start/End: Original strand, 30388465 - 30388575
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||| ||| ||||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  30388465 tagtggctagagctcacacaattt--aattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 30388562  T
Q  1592 ggttaagctcacg 1604  Q
     | ||||||||||    
T  30388563 agctaagctcacg 30388575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 32619397 - 32619348
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||||||||| |  |||||| ||||||||||||||||    
T  32619397 cctacatataatatgcaatatccttaacaactgagttaagctcacgggga 32619348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 35950171 - 35950126
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  35950171 catataatatgcaatatccctaccaactgagctaagctcacgggga 35950126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1556 - 1605
Target Start/End: Complemental strand, 41084089 - 41084040
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||| |||||||||||||| ||||||| | |||||||||||    
T  41084089 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 41084040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1556 - 1605
Target Start/End: Original strand, 42182218 - 42182267
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||| ||||||||| |||| ||||||| |||||||||||||    
T  42182218 acccctgcatataatatgcaatacccctaccaactgagttaagctcacgg 42182267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 42443732 - 42443687
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  42443732 catataatatgcaatatccctaccaactgagctaagctcacgggga 42443687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 44616645 - 44616600
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  44616645 catataatatgcaatatccctaccaactgagctaagctcacgggga 44616600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 7e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1492 - 1608
Target Start/End: Complemental strand, 39362379 - 39362263
Alignment:
Q  1492 ttagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaac-ccaacccctacatatattatgcaatatcccttccaact 1590  Q
    ||||||||| || |||||||||||||||| ||| || || ||||||| ||||||||| ||| |||||| || |||||| |||||||||||||| ||||||    
T  39362379 ttagtggctagaactcacacattttttaa-tgtggagaagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccctaccaact 39362281  T
Q  1591 gggttaagctcacgggga 1608  Q
    | | ||||||||||||||    
T  39362280 gagctaagctcacgggga 39362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1517 - 1604
Target Start/End: Original strand, 22437771 - 22437858
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||||| || || || |||| ||||||||| ||| |||||||| |||| |||||||||||||||| ||||||| | ||||||||||    
T  22437771 ttaaatgtggagaactgaggtgtctggggttcgaactcaacccctgcataaattatgcaatatccctaccaactgagctaagctcacg 22437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1516 - 1606
Target Start/End: Complemental strand, 34472388 - 34472297
Alignment:
Q  1516 tttaaatgttgaaaattggggtggctggggttcaaaccc-aacccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||| ||| ||||| ||| ||| ||||||||| ||||| ||| ||| |||||| |||||||||||||| ||||||| ||||||||||||||    
T  34472388 tttaattgtggaaaagtggagtgtctggggttcgaaccccaactcctgcatataatatgcaatatccctaccaactgagttaagctcacggg 34472297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1493 - 1604
Target Start/End: Complemental strand, 41458406 - 41458297
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttc-aaacccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    ||||||||| |||||||||||||   |||||| || || ||| ||| | | ||||| ||||||| ||||| |||||| |||||||||||||| |||||||    
T  41458406 tagtggctgaagctcacacattt---aaatgtggagaagtggagtgtccgaggttcgaaacccagcccctgcatataatatgcaatatccctaccaactg 41458310  T
Q  1592 ggttaagctcacg 1604  Q
     ||||||||||||    
T  41458309 agttaagctcacg 41458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 16449192 - 16449123
Alignment:
Q  1540 ctggggttcaaaccc-aacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| ||||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  16449192 ctggggttcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 16449123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 42880995 - 42880946
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  42880995 cctacatataatatgcaatatccctaccaactgagttaagctcacgggga 42880946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 7388509 - 7388453
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| |||||||||||||| ||||||| |||||| |||||||||    
T  7388509 cccaacccctgcatataatatgcaatatccctaccaactgagttaagttcacgggga 7388453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1604
Target Start/End: Original strand, 8698596 - 8698648
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    ||||||||||||||||| |||||||||||||| ||||||| | ||||||||||    
T  8698596 cccaacccctacatataatatgcaatatccctaccaactgagctaagctcacg 8698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1517 - 1605
Target Start/End: Complemental strand, 22202802 - 22202714
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||||| ||||| |||||||  |||| || || |||||| ||| |||| |||||||||| ||||| ||||||| |||||||||||||    
T  22202802 ttaaatgtggaaaagtggggtgtttgggtttaaatcccaactcctgcataaattatgcaatgtccctaccaactgagttaagctcacgg 22202714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 33618022 - 33617970
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  33618022 acccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 33617970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 38402305 - 38402249
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| || ||| |||||||||||||| ||||||| ||||||||||||||||    
T  38402305 cccaacccctgcaaataatatgcaatatccctaccaactgagttaagctcacgggga 38402249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 43656086 - 43656034
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  43656086 acccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 43656034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 8034433 - 8034484
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  8034433 cccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 8034484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Complemental strand, 10083274 - 10083164
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| |||||||||||| |   |||| | || || ||||||| | ||||||| |||| | |||||| |||||| |||||||||||||| |||||||    
T  10083274 tagtggctagagctcacacatat---aaatatggagaagtggggtgtccggggttcgaacctcgacccctgcatataatatgcaatatccctaccaactg 10083178  T
Q  1592 ggttaagctcacgg 1605  Q
     |||||||||||||    
T  10083177 agttaagctcacgg 10083164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1493 - 1609
Target Start/End: Original strand, 13059135 - 13059250
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    ||||||||||||| ||||||||||  |||||| || || ||||||| | ||||||| |||||   ||||| |||| |||||||| | ||||| |||||||    
T  13059135 tagtggctggagcacacacatttt--aaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactg 13059232  T
Q  1592 ggttaagctcacggggac 1609  Q
     | |||||||||||||||    
T  13059233 agctaagctcacggggac 13059250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 37717406 - 37717361
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  37717406 catataatatgcaatatccctaccaactgagttaagctcacgggga 37717361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1604
Target Start/End: Complemental strand, 38344161 - 38344051
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaacc-cctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||| ||| ||||||||| ||||| | | ||| |||||| |||||||||||||| |||||||    
T  38344161 tagtggctagagctcacacaattt--aattgtggagaagtggagtgtctggggttcgaaccccagctcctgcatataatatgcaatatccctaccaactg 38344064  T
Q  1592 ggttaagctcacg 1604  Q
     ||||||||||||    
T  38344063 agttaagctcacg 38344051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Original strand, 12245 - 12297
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  12245 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 8265318 - 8265266
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  8265318 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 8265266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1516 - 1608
Target Start/End: Original strand, 32719587 - 32719679
Alignment:
Q  1516 tttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| ||| ||||| ||| ||| | ||| ||| ||||| | |||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  32719587 tttaattgtggaaaagtggagtgtccgggattcgaaccccaaccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 32719679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 36540337 - 36540285
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| ||||||  ||||||||||||| ||||||| ||||||||||||||||    
T  36540337 acccctgcatataaaatgcaatatccctaccaactgagttaagctcacgggga 36540285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1552 - 1603
Target Start/End: Original strand, 197080 - 197131
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||||||||||||  |||||||||||||| ||||||| | |||||||||    
T  197080 cccaacccctacatattatatgcaatatccctaccaactgagctaagctcac 197131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1552 - 1603
Target Start/End: Original strand, 311917 - 311968
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||||||||||||  |||||||||||||| ||||||| | |||||||||    
T  311917 cccaacccctacatattatatgcaatatccctaccaactgagctaagctcac 311968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 23178912 - 23178963
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  23178912 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 23178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 24458366 - 24458315
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| ||| |||||||||||||||||| | ||||||||||||||    
T  24458366 cccctgcatataatatacaatatcccttccaactgagctaagctcacgggga 24458315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 26022296 - 26022245
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  26022296 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 26022245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 35939536 - 35939485
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  35939536 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 35939485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 38955215 - 38955266
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  38955215 cccctgcatataatatgtaatatccctaccaactgagttaagctcacgggga 38955266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 41689931 - 41689880
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  41689931 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 41689880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1605
Target Start/End: Complemental strand, 13406643 - 13406601
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  13406643 catataatatgcaatatccctaccaactgagttaagctcacgg 13406601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1605
Target Start/End: Original strand, 31450984 - 31451026
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  31450984 catataatatgcaatatccctaccaactgagttaagctcacgg 31451026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1557 - 1607
Target Start/End: Original strand, 43856403 - 43856453
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggg 1607  Q
    ||||| ||||||  ||||||||||||| ||||||| |||||||||||||||    
T  43856403 cccctgcatataaaatgcaatatccctaccaactgagttaagctcacgggg 43856453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 94538 - 94583
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  94538 catataatatgcaatatccctaccaactgagctaagctcacgggga 94583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1517 - 1609
Target Start/End: Complemental strand, 481101 - 481008
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||| || || ||||||| | ||||||| |||| |  ||||| |||| |||||||||| ||||| ||||||| | |||||||||||||||    
T  481101 ttaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactgagctaagctcacggggac 481008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 1937353 - 1937308
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  1937353 catataatatgcaatatccctaccaactgagctaagctcacgggga 1937308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1604
Target Start/End: Original strand, 8953896 - 8953937
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  8953896 catataatatgcaatatccctaccaactgtgttaagctcacg 8953937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 10568197 - 10568083
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | |||||||||||||   ||||| ||| || |||||||||||||| |||||||    
T  10568197 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcaaaccccttcccctgcatttaatatgcaatatccctaccaactg 10568100  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||| ||||||||||    
T  10568099 agctaaactcacgggga 10568083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 10736901 - 10736946
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  10736901 catataatatgcaatatccctaccaactgagctaagctcacgggga 10736946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 11875929 - 11875884
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  11875929 catataatatgcaatatccctaccaactgagctaagctcacgggga 11875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 11890936 - 11890891
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  11890936 catataatatgcaatatccctaccaactgagctaagctcacgggga 11890891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 17027907 - 17027952
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17027907 catataatatgcaatatccctaccaactgagctaagctcacgggga 17027952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 17558343 - 17558388
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17558343 catataatatgcaatatccctaccaactgagctaagctcacgggga 17558388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 17698565 - 17698520
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17698565 catataatatgcaatatccctaccaactgagctaagctcacgggga 17698520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1606
Target Start/End: Original strand, 23339917 - 23339966
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||||||| ||| ||||||| || ||||||| ||||||||||||||    
T  23339917 cccctacatataatatacaatatctctaccaactgagttaagctcacggg 23339966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1552 - 1605
Target Start/End: Original strand, 24296884 - 24296937
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||||||| |||||| |||||||||||||| | ||||| | |||||||||||    
T  24296884 cccaacccctgcatataatatgcaatatccctactaactgagctaagctcacgg 24296937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1571 - 1608
Target Start/End: Original strand, 26280819 - 26280856
Alignment:
Q  1571 atgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  26280819 atgcaatatccctaccaactgagttaagctcacgggga 26280856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 29716903 - 29716858
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  29716903 catataatatgcaatatccctaccaactgagctaagctcacgggga 29716858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 30972844 - 30972889
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  30972844 catataatatgcaatatccctaccaactgagctaagctcacgggga 30972889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 34413105 - 34413060
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  34413105 catataatatgcaatatccctaccaactgagctaagctcacgggga 34413060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 34894481 - 34894367
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  34894481 tagtggctagagctcacacaattt--aactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 34894384  T
Q  1592 ggttaagctcacgggga 1608  Q
     | |||||| |||||||    
T  34894383 agctaagcttacgggga 34894367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 4e-17; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1516 - 1606
Target Start/End: Original strand, 2806481 - 2806571
Alignment:
Q  1516 tttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||| ||| |||||| |||||| ||||||||| ||||| ||||||||||||| ||| |||||||||| ||||||| | ||||||||||||    
T  2806481 tttaattgtggaaaatcggggtgtctggggttcgaacccgacccctacatataatatacaatatccctaccaactgagctaagctcacggg 2806571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1557 - 1609
Target Start/End: Complemental strand, 43214405 - 43214353
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  43214405 cccctacataaattatgcaatatccctaccaactgagttaagctcacggggac 43214353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1554 - 1608
Target Start/End: Complemental strand, 5062349 - 5062295
Alignment:
Q  1554 caacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||    
T  5062349 caacccctatatataatatgcaatatccctaccaactgagttaagctcacgggga 5062295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Original strand, 29772236 - 29772347
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| ||   || ||| || |||||| ||| ||||||||| ||||| | |||| ||||||| |||||||||||||| |||||||    
T  29772236 tagtggctagagctcacacaatta--aattgtggagaattggagtgtctggggttcgaaccccagccccgacatataatatgcaatatccctaccaactg 29772333  T
Q  1592 ggttaagctcacgg 1605  Q
     |||||||||||||    
T  29772334 tgttaagctcacgg 29772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1538
Target Start/End: Complemental strand, 32221081 - 32221036
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtg 1538  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||    
T  32221081 tagtggctggagctcacacattttttaaatgtggaaaagtggggtg 32221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1556 - 1605
Target Start/End: Original strand, 40363091 - 40363140
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  40363091 acccctacatataatatgcaatatccctaccaactgagttaagctcacgg 40363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 24581480 - 24581536
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| ||||||||||||||||||||| ||||||| |||||||| |||||||    
T  24581480 cccagcccctgcatatattatgcaatatccctgccaactgagttaagcttacgggga 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 33669785 - 33669734
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| | ||||| ||||||||||||||||    
T  33669785 cccctacatataatatgcaatatccctactaactgagttaagctcacgggga 33669734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1493 - 1601
Target Start/End: Complemental strand, 15939401 - 15939294
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccc-aacccctacatatattatgcaatatcccttccaactg 1591  Q
    ||||||||||||||||||||  |||||||||| || || |||||||   ||||||| ||||| |||| || ||||||||||||||| || || |||| ||    
T  15939401 tagtggctggagctcacaca--ttttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgtctctgccaattg 15939304  T
Q  1592 ggttaagctc 1601  Q
     |||||||||    
T  15939303 agttaagctc 15939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1556 - 1609
Target Start/End: Complemental strand, 23405246 - 23405193
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||| ||||||||||||||| ||||| ||||||| | |||||||||||||||    
T  23405246 acccctgcatatattatgcaatgtccctaccaactgagctaagctcacggggac 23405193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1603
Target Start/End: Original strand, 23919436 - 23919544
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||||||| ||||||| ||   |||||| || || ||||||| ||||| ||| |||||  |||||| ||||||||||||||| ||||| |||||||    
T  23919436 tagtggctggagttcacacaatt---aaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactg 23919532  T
Q  1592 ggttaagctcac 1603  Q
     | |||||||||    
T  23919533 agctaagctcac 23919544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 33228891 - 33229005
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  33228891 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 33228988  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  33228989 agctaagctcacgggga 33229005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 39408717 - 39408762
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  39408717 catataatatgcaatatccctaccaactgagttaagctcacgggga 39408762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1604
Target Start/End: Complemental strand, 15764984 - 15764932
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||||||| |||||| |||||||||||||| ||||||| | ||||||||||    
T  15764984 cccaacccctgcatataatatgcaatatccctaccaactgagctaagctcacg 15764932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 35798042 - 35798098
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| ||||||||||| ||  |||||| ||||||||||||||||    
T  35798042 cccaacccctgcatataatatgcaatatctctaacaactgagttaagctcacgggga 35798098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1553 - 1609
Target Start/End: Complemental strand, 41566815 - 41566759
Alignment:
Q  1553 ccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    ||||||||| |||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  41566815 ccaacccctgcatataatatgcaatattcctaccaactgagctaagctcacggggac 41566759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 3287077 - 3287128
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||||||||||| | ||||||||| ||||    
T  3287077 cccctgcatataatatgcaatatcccttccaactgagctaagctcacaggga 3287128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 8250322 - 8250373
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  8250322 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 8250373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1560 - 1603
Target Start/End: Complemental strand, 32168974 - 32168931
Alignment:
Q  1560 ctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||    
T  32168974 ctacatataatatgcaatatccctaccaactgagttaagctcac 32168931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1540 - 1598
Target Start/End: Original strand, 36089128 - 36089187
Alignment:
Q  1540 ctggggttcaaaccc-aacccctacatatattatgcaatatcccttccaactgggttaag 1598  Q
    ||||||||||||||| |||||||  ||||| |||||||||||||| ||||||| ||||||    
T  36089128 ctggggttcaaaccccaacccctgtatataatatgcaatatccctgccaactgagttaag 36089187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 38400359 - 38400308
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  38400359 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 38400308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1554 - 1608
Target Start/End: Complemental strand, 16904825 - 16904771
Alignment:
Q  1554 caacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||||||||||  |||||| ||  |||||| ||||||||||||||||    
T  16904825 caacccctacatatattatataatatcgctgtcaactgagttaagctcacgggga 16904771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1605
Target Start/End: Original strand, 32609214 - 32609256
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  32609214 catataatatgcaatatccctaccaactgagttaagctcacgg 32609256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1557 - 1607
Target Start/End: Complemental strand, 34614028 - 34613978
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggg 1607  Q
    ||||| |||||| |||||||||||||| ||||||| | |||||||||||||    
T  34614028 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggg 34613978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1558 - 1608
Target Start/End: Complemental strand, 43146400 - 43146350
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| |||| |||||||||||||||| ||||||| ||||| ||||||||||    
T  43146400 ccctgcataaattatgcaatatccctaccaactgagttaaactcacgggga 43146350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1558 - 1608
Target Start/End: Complemental strand, 44948644 - 44948594
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  44948644 ccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 44948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 1260232 - 1260183
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||  ||||||||||||| ||||||| | ||||||||||||||    
T  1260232 cctacatataacatgcaatatccctaccaactgagctaagctcacgggga 1260183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 3446773 - 3446728
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  3446773 catataatatgcaatatccctaccaactgagctaagctcacgggga 3446728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 4183219 - 4183174
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  4183219 catataatatgcaatatccctaccaactgagctaagctcacgggga 4183174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 7379627 - 7379672
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||| | ||||||| ||||||||||||||||    
T  7379627 catataatatgcaatatccttaccaactgagttaagctcacgggga 7379672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 18694828 - 18694783
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  18694828 catataatatgcaatatccctaccaactgagctaagctcacgggga 18694783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 19281651 - 19281606
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19281651 catataatatgcaatatccctaccaactgagctaagctcacgggga 19281606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 19684116 - 19684071
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19684116 catataatatgcaatatccctaccaactgagctaagctcacgggga 19684071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 22653671 - 22653716
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  22653671 catataatatgcaatatccctaccaactgagctaagctcacgggga 22653716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 25857322 - 25857367
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  25857322 catataatatgcaatatccctaccaactgagctaagctcacgggga 25857367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 28194744 - 28194630
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaac-ccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| ||| ||| ||||| |||||| ||||||||||||||  ||||||    
T  28194744 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaactccagcccctgcatataatatgcaatatccctagcaactg 28194647  T
Q  1592 ggttaagctcacgggga 1608  Q
     | |||||||| |||||    
T  28194646 agctaagctcatgggga 28194630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 30932473 - 30932518
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  30932473 catataatatgcaatatccctaccaactgaggtaagctcacgggga 30932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 33041890 - 33041935
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||| ||||||||||    
T  33041890 catataatatgcaatatccctaccaactgagttaaactcacgggga 33041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 33233249 - 33233294
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  33233249 catataatatgcaatatccctaccaactgagataagctcacgggga 33233294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 40473508 - 40473622
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | | ||||||||||| | ||||| ||||||  |||||||||  || |||||||    
T  40473508 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccgaggttcaaaccccagcccctgcatataacatgcaatatttctaccaactg 40473605  T
Q  1592 ggttaagctcacgggga 1608  Q
     ||||||||||||||||    
T  40473606 agttaagctcacgggga 40473622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-16; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 40051734 - 40051620
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| ||||||||| |||||  ||||||||||||| |||||||||||||| |||||||    
T  40051734 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtctggggttcgaacccctacccctacatataatatgcaatatccctaccaactg 40051637  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  40051636 agctaagctcacgggga 40051620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1542 - 1603
Target Start/End: Original strand, 35851707 - 35851768
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||| ||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  35851707 ggggttctaaccctacccctacatatattatgcaatgtccctaccaactgagttaagctcac 35851768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 3036013 - 3036127
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||| |  ||||| |||||| |||||||||||||| |||||||    
T  3036013 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaacctcggcccctgcatataatatgcaatatccctaccaactg 3036110  T
Q  1592 ggttaagctcacgggga 1608  Q
     ||||||||||||||||    
T  3036111 agttaagctcacgggga 3036127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 31852629 - 31852685
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||||||| ||||||||| |||| ||||||| | ||||||||||||||    
T  31852629 cccaacccctacatataatatgcaataaccctaccaactgagataagctcacgggga 31852685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1532 - 1604
Target Start/End: Original strand, 56479222 - 56479294
Alignment:
Q  1532 tggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    ||||||| | ||||||| ||||| |||||| |||||| |||||||||||||| ||||||| |||||| |||||    
T  56479222 tggggtgtccggggttcgaacccgacccctgcatataatatgcaatatccctaccaactgagttaagttcacg 56479294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1532 - 1591
Target Start/End: Complemental strand, 46903405 - 46903346
Alignment:
Q  1532 tggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    ||||||| | |||||||||||||||||||| |||||| |||||||||||| | |||||||    
T  46903405 tggggtgtccggggttcaaacccaacccctgcatataatatgcaatatccataccaactg 46903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1532 - 1605
Target Start/End: Original strand, 13578460 - 13578534
Alignment:
Q  1532 tggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||| | ||||||| |||||  |||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  13578460 tggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 13578534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1542 - 1604
Target Start/End: Original strand, 39696343 - 39696405
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    ||||||| ||||| || |||||||||| |||||||||||||| ||||||| | ||||||||||    
T  39696343 ggggttcgaacccgactcctacatataatatgcaatatccctaccaactgagctaagctcacg 39696405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1552 - 1606
Target Start/End: Original strand, 40994119 - 40994173
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||||||| |||||||||||||| ||||||| | ||||||||||||    
T  40994119 cccaactcctacatataatatgcaatatccctaccaactgagctaagctcacggg 40994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1492 - 1607
Target Start/End: Complemental strand, 42002418 - 42002305
Alignment:
Q  1492 ttagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaact 1590  Q
    ||||||||| ||||||||||| ||   |||||| || || ||||||| ||| |||||||||| |  |||||||||| |||||||||| ||||| ||||||    
T  42002418 ttagtggctagagctcacacaatt---aaatgtggagaagtggggtgtctgaggttcaaaccacggcccctacataaattatgcaatgtccctaccaact 42002322  T
Q  1591 gggttaagctcacgggg 1607  Q
      | |||||||||||||    
T  42002321 aagctaagctcacgggg 42002305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1552 - 1609
Target Start/End: Complemental strand, 4931944 - 4931887
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    ||||| |||||||||||||||||||| |||||  |||||| |||||| ||||||||||    
T  4931944 cccaaaccctacatatattatgcaatgtccctcgcaactgagttaagttcacggggac 4931887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 10402553 - 10402439
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaac-ccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || || |||| | ||||||| ||| || |||||| |||||| ||||||||||| || |||||||    
T  10402553 tagtggctagagctcacacaattt--aattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgcaatatctctaccaactg 10402456  T
Q  1592 ggttaagctcacgggga 1608  Q
     ||||||||||||||||    
T  10402455 agttaagctcacgggga 10402439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 48569179 - 48569248
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  48569179 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 48569248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 52798321 - 52798276
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  52798321 catataatatgcaatatccctaccaactgagttaagctcacgggga 52798276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1492 - 1606
Target Start/End: Complemental strand, 624593 - 624480
Alignment:
Q  1492 ttagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaact 1590  Q
    ||||||| | |||||||||||||||  |||||| || || ||||||| | ||||||| |||||   ||||| |||| |||||||||| ||| | ||||||    
T  624593 ttagtggttagagctcacacatttt--aaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaact 624496  T
Q  1591 gggttaagctcacggg 1606  Q
    | ||||||||||||||    
T  624495 gagttaagctcacggg 624480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1557 - 1609
Target Start/End: Original strand, 33933760 - 33933812
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    ||||| ||||||||||||||| ||||| ||||||| | |||||||||||||||    
T  33933760 cccctgcatatattatgcaatgtccctaccaactgagctaagctcacggggac 33933812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1604
Target Start/End: Complemental strand, 37310081 - 37310029
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    ||||||||||||||||| |||||||||||| | ||||||| ||||| ||||||    
T  37310081 cccaacccctacatataatatgcaatatccataccaactgagttaaactcacg 37310029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 37935915 - 37935859
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  37935915 cccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 37935859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 39023225 - 39023173
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  39023225 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 39023173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 45673706 - 45673650
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||| |||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  45673706 cccaatccctgcatataatatgcaatattcctaccaactgagttaagctcacgggga 45673650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 52757294 - 52757350
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| |||||||||| ||| ||||||| | ||||||||||||||    
T  52757294 cccaacccctgcatataatatgcaatattcctgccaactgagctaagctcacgggga 52757350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 5165906 - 5165855
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| ||||| |||||||| ||||||| ||||||||||||||||    
T  5165906 cccctgcatataatatgcgatatccctaccaactgagttaagctcacgggga 5165855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 8965143 - 8965092
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  8965143 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 8965092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 24680107 - 24680158
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  24680107 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 24680158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 49901531 - 49901480
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  49901531 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 49901480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1509 - 1568
Target Start/End: Complemental strand, 54215859 - 54215800
Alignment:
Q  1509 cacattttttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatata 1568  Q
    ||||| |||||||||| || || ||||||| ||||||||| ||||| |||||||||||||    
T  54215859 cacatattttaaatgtggagaagtggggtgtctggggttcgaaccccacccctacatata 54215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Complemental strand, 3785022 - 3784913
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgg 1592  Q
    |||||||||||||||||||||||   |||||| || || || ||||   ||||||| |||||   |||| |||| |||||||||||||||| |||| ||     
T  3785022 tagtggctggagctcacacattt---aaatgtggagaagtgtggtgttcggggttcgaaccctgaccctgcataaattatgcaatatccctaccaattga 3784926  T
Q  1593 gttaagctcacgg 1605  Q
    | |||||||||||    
T  3784925 gctaagctcacgg 3784913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Original strand, 18424917 - 18424967
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||| |||||||| |||||||||||||| ||||||| |||||| |||||||    
T  18424917 acccatacatataatatgcaatatccctaccaactgagttaagttcacggg 18424967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1542 - 1608
Target Start/End: Complemental strand, 26868413 - 26868347
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||| |||||  | ||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  26868413 ggggttcgaacccggctcctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 26868347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1570 - 1608
Target Start/End: Complemental strand, 37251149 - 37251111
Alignment:
Q  1570 tatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  37251149 tatgcaatatccctaccaactgagttaagctcacgggga 37251111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1613
Target Start/End: Complemental strand, 42845065 - 42845015
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    ||||||||||||| | ||| ||||||||| |||||||||||| ||||||||    
T  42845065 catatattatgcattgtcctttccaactgagttaagctcacgaggacaaca 42845015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Complemental strand, 43978058 - 43978008
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||    
T  43978058 acccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 43978008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 3764011 - 3764080
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||| ||||||||| ||||||| | ||||||||||||||    
T  3764011 ctggggttcgaaccccagcccctgcatataatatgtaatatccctaccaactgagctaagctcacgggga 3764080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 3847724 - 3847679
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  3847724 catataatatgcaatatccctaccaactgagctaagctcacgggga 3847679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 6371157 - 6371112
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  6371157 catataatatgcaatatccctaccaactgagctaagctcacgggga 6371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1541 - 1605
Target Start/End: Complemental strand, 8282408 - 8282343
Alignment:
Q  1541 tggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||||||||| |||||||| |||||| |||||||||||| |  ||| || |||||||||||||    
T  8282408 tggggttcaaacctcaacccctgcatataatatgcaatatccttatcaattgagttaagctcacgg 8282343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 9761158 - 9761113
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9761158 catataatatgcaatatccctaccaactgaggtaagctcacgggga 9761113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1542 - 1606
Target Start/End: Complemental strand, 11826519 - 11826454
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatccctt-ccaactgggttaagctcacggg 1606  Q
    ||||||| |||||||||||| |||||| ||| |||||||  || ||||||| ||||||||||||||    
T  11826519 ggggttcgaacccaacccctgcatataatatacaatatcttttaccaactgagttaagctcacggg 11826454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1560 - 1609
Target Start/End: Original strand, 13984660 - 13984709
Alignment:
Q  1560 ctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||||||||||| | | ||| ||||||| |||||||||||||||||    
T  13984660 ctacatatattatgcattgttcctaccaactgagttaagctcacggggac 13984709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 15208569 - 15208520
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||||||||||| || |||| ||||||||||||||||    
T  15208569 cctatatataatatgcaatatccctacccactgagttaagctcacgggga 15208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1606
Target Start/End: Original strand, 22788695 - 22788744
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||    
T  22788695 cccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 22788744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 25235800 - 25235869
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||  | ||||||||||||||    
T  25235800 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactaagctaagctcacgggga 25235869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1610
Target Start/End: Complemental strand, 26250696 - 26250643
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggggaca 1610  Q
    ||||| |||| |||||||||| ||||| ||||||| |||| |||||||||||||    
T  26250696 cccctgcataaattatgcaatgtccctaccaactgagttatgctcacggggaca 26250643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 26919495 - 26919540
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  26919495 catataatatgcaatatccctaccaactgagctaagctcacgggga 26919540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 43147411 - 43147456
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  43147411 catataatatgcaatatccctaccaactgagctaagctcacgggga 43147456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 43207712 - 43207667
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  43207712 catataatatgcaatatccctaccaactgagctaagctcacgggga 43207667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 43596938 - 43596893
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  43596938 catataatatgcaatatccctaccaactgagctaagctcacgggga 43596893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1536 - 1608
Target Start/End: Complemental strand, 44602556 - 44602483
Alignment:
Q  1536 gtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||| |||||   ||||| ||||||  ||||||||||||| ||||||| | ||||||||||||||    
T  44602556 gtggctggggttcgaaccccggcccctgcatataaaatgcaatatccctaccaactgagctaagctcacgggga 44602483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 45112138 - 45112183
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  45112138 catataatatgcaatatccctaccaactgaggtaagctcacgggga 45112183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 46105578 - 46105533
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  46105578 catataatatgcaatatccctaccaactgagctaagctcacgggga 46105533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 46775057 - 46775102
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  46775057 catataatatgcaatatccctaccaactgagctaagctcacgggga 46775102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1607
Target Start/End: Complemental strand, 51890908 - 51890796
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| ||   |||||| || || ||||||| | ||||||| |||||   ||||| |||| |||||||||| ||||| |||||||    
T  51890908 tagtggctagagctcacacaatt---aaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactg 51890812  T
Q  1592 ggttaagctcacgggg 1607  Q
     | |||||||||||||    
T  51890811 agctaagctcacgggg 51890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 55251378 - 55251423
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  55251378 catataatatgcaatatccctaccaactgagctaagctcacgggga 55251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000006; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1517 - 1607
Target Start/End: Original strand, 52309090 - 52309181
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgggg 1607  Q
    |||||||| || || ||||||| ||||||||| |||||  || ||| |||||| |||||||||||||| ||||||| |||||||||||||||    
T  52309090 ttaaatgtggagaagtggggtgtctggggttcgaaccccgactcctgcatatagtatgcaatatccctaccaactgagttaagctcacgggg 52309181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 34898725 - 34898839
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| ||||||||| |||| || ||||| |||||| |||||||||||||| |||||||    
T  34898725 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaatatccctaccaactg 34898822  T
Q  1592 ggttaagctcacgggga 1608  Q
       ||||||||||||||    
T  34898823 aactaagctcacgggga 34898839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 48739702 - 48739816
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| ||||||||| ||||| | ||||| ||||||  ||||||||||||| |||||||    
T  48739702 tagtggctagagctcacacagttt--aattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctaccaactg 48739799  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  48739800 agctaagctcacgggga 48739816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1493 - 1610
Target Start/End: Original strand, 25883946 - 25884063
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttc-aaacccaacccctacatatattatgca-atatcccttccaact 1590  Q
    ||||||||||||||||||||  |||||||||| || || ||||||| | ||||||| || ||| |||||| |||||||||||||  | ||||| ||||||    
T  25883946 tagtggctggagctcacaca--ttttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgcatttgtccctaccaact 25884043  T
Q  1591 gggttaagctcacggggaca 1610  Q
      | ||||||||||||||||    
T  25884044 aagctaagctcacggggaca 25884063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 53163643 - 53163592
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  53163643 cccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 53163592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1554 - 1608
Target Start/End: Original strand, 39966092 - 39966146
Alignment:
Q  1554 caacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  39966092 caacccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 39966146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 19999934 - 19999865
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19999934 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 19999865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 22501934 - 22502003
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  22501934 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 22502003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 52974080 - 52974125
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  52974080 catataatatgcaatatccctaccaactgagttaagctcacgggga 52974125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1563 - 1603
Target Start/End: Complemental strand, 552214 - 552174
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  552214 catatattatgcaatatccctaccaactgagttaagctcac 552174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 3748618 - 3748674
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||| ||| |||||||||| ||||||| | ||||||||||||||    
T  3748618 cccaacccctgcatataatatacaatatccctaccaactgagctaagctcacgggga 3748674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1517 - 1612
Target Start/End: Original strand, 19222566 - 19222662
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacggggacaac 1612  Q
    |||||||| || || ||||||| | ||||||| |||||   ||||| |||| |||||||||| ||||| ||||||| |||||||||||| |||||||    
T  19222566 ttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactgagttaagctcacgcggacaac 19222662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1515 - 1602
Target Start/End: Original strand, 29559652 - 29559740
Alignment:
Q  1515 ttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctca 1602  Q
    |||||||||| || || ||||||| | |  ||||||||||  ||| ||||||||| |||||||||||||| ||||||| ||||||||||    
T  29559652 ttttaaatgtggagaagtggggtgtccgaagttcaaaccccgacctctacatataatatgcaatatccctaccaactgagttaagctca 29559740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 34847593 - 34847541
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| |||||||  |||||||||||||||    
T  34847593 acccctgcatataatatgcaatatccctaccaactgaattaagctcacgggga 34847541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1492 - 1606
Target Start/End: Complemental strand, 47098845 - 47098732
Alignment:
Q  1492 ttagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaact 1590  Q
    ||||||||| ||||||||||| |||  || ||| || || ||| ||| ||||||||| |||||   ||||| |||||| |||||||||||||| ||||||    
T  47098845 ttagtggctagagctcacacaattt--aattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctaccaact 47098748  T
Q  1591 gggttaagctcacggg 1606  Q
    | | ||||||||||||    
T  47098747 gagctaagctcacggg 47098732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 52945945 - 52945893
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  52945945 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 52945893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 1743818 - 1743869
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||  ||||||||||||| |||| || ||||||||||||||||    
T  1743818 cccctacatataaaatgcaatatccctaccaattgagttaagctcacgggga 1743869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1604
Target Start/End: Original strand, 17602697 - 17602744
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||||    
T  17602697 cccctacatataatatgcaatatccctaccaactgagctaagctcacg 17602744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 17608340 - 17608391
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||  ||||||||||||||||    
T  17608340 cccctgcatataatatgcaatatccctaccaactaagttaagctcacgggga 17608391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1493 - 1609
Target Start/End: Complemental strand, 24303501 - 24303387
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| ||   |||||| || || ||||||| | ||||||| |||||   ||||| |||| |||||||||| ||||| |||||||    
T  24303501 tagtggctagagctcacacaatt---aaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactg 24303405  T
Q  1592 ggttaagctcacggggac 1609  Q
     | |||||||||||||||    
T  24303404 agctaagctcacggggac 24303387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 28550340 - 28550391
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  28550340 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 28550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1493 - 1609
Target Start/End: Original strand, 46844930 - 46845044
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaac-ccaacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||| ||||||||||||||||||   |||||| || || | ||||| | ||||||| ||| || |||||| |||| |||||||||| ||||| |||| ||    
T  46844930 tagtagctggagctcacacattt---aaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgcaatgtccctgccaattg 46845026  T
Q  1592 ggttaagctcacggggac 1609  Q
     | |||||||||||||||    
T  46845027 agctaagctcacggggac 46845044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1493 - 1609
Target Start/End: Original strand, 48515344 - 48515458
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||| ||||||||||   |||||| || || || |||| | ||||||| |||| | |||||| |||| |||||| ||||||||| |||||||    
T  48515344 tagtggctagagttcacacattt---aaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatggaatatccctaccaactg 48515440  T
Q  1592 ggttaagctcacggggac 1609  Q
     ||||||||||| |||||    
T  48515441 agttaagctcacagggac 48515458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 53752721 - 53752772
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| ||||| |||||||| ||||||| ||||||||||||||||    
T  53752721 cccctgcatataatatgccatatccctaccaactgagttaagctcacgggga 53752772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1560 - 1606
Target Start/End: Original strand, 12894554 - 12894600
Alignment:
Q  1560 ctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||||  ||||||||||||| ||||||| ||||||||||||||    
T  12894554 ctacatataaaatgcaatatccctaccaactgagttaagctcacggg 12894600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1492 - 1608
Target Start/End: Original strand, 32256511 - 32256626
Alignment:
Q  1492 ttagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaact 1590  Q
    ||||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| ||||||  ||||||||||||| ||||||    
T  32256511 ttagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataacatgcaatatccctaccaact 32256608  T
Q  1591 gggttaagctcacgggga 1608  Q
    | | ||||||||||||||    
T  32256609 gagctaagctcacgggga 32256626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1493 - 1609
Target Start/End: Complemental strand, 34102180 - 34102062
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttc-aaacccaacccctacatatattatgca-atatcccttccaact 1590  Q
    |||||| ||||||||||||||||||||||||| || || || |||| | ||||||| || |||| ||||| ||||||  |||||  | ||||| ||||||    
T  34102180 tagtggttggagctcacacattttttaaatgtggagaaatgaggtgtccggggttcgaaccccagcccctgcatataaaatgcatttgtccctaccaact 34102081  T
Q  1591 gggttaagctcacggggac 1609  Q
    | |  ||||||||||||||    
T  34102080 gagcaaagctcacggggac 34102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1558 - 1608
Target Start/End: Original strand, 53347312 - 53347362
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  53347312 ccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 53347362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1561 - 1611
Target Start/End: Original strand, 53633636 - 53633686
Alignment:
Q  1561 tacatatattatgcaatatcccttccaactgggttaagctcacggggacaa 1611  Q
    ||||||||||||||| ||||| | ||||||| |||||||||||| ||||||    
T  53633636 tacatatattatgcattatccttaccaactgagttaagctcacgaggacaa 53633686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 882432 - 882387
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  882432 catataatatgcaatatccctaccaactgagctaagctcacgggga 882387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 2522969 - 2522924
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  2522969 catataatatgcaatatccctaccaactgagctaagctcacgggga 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1532 - 1609
Target Start/End: Original strand, 4236975 - 4237052
Alignment:
Q  1532 tggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    ||||||| | ||||||| |||||  ||||| |||| |||||||||| ||||| |||||||   |||||||||||||||    
T  4236975 tggggtgtccggggttcgaaccccgcccctgcataaattatgcaatgtccctaccaactgaactaagctcacggggac 4237052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 7269998 - 7269953
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7269998 catataatatgcaatatccctaccaactgagctaagctcacgggga 7269953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 7920363 - 7920318
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7920363 catataatatgcaatatccctaccaactgagctaagctcacgggga 7920318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1515 - 1603
Target Start/End: Original strand, 7938274 - 7938363
Alignment:
Q  1515 ttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    |||||| ||| || || ||| ||| ||||||||| |||||  |||||||||||||  ||| ||||||||| ||||||| |||||||||||    
T  7938274 ttttaattgtggagaagtggagtgtctggggttcgaaccccgacccctacatataaaatgtaatatccctaccaactgagttaagctcac 7938363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Complemental strand, 11820051 - 11820002
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||  ||||||||||||| ||||||| | ||||||||||||||    
T  11820051 cctacatataacatgcaatatccctaccaactgagctaagctcacgggga 11820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 13638248 - 13638317
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | |||||||||||| |||| ||||||||| |||||||   ||||||||||||||    
T  13638248 ctggggttcgaaccccagcccctacatataatatgtaatatccctaccaactgaactaagctcacgggga 13638317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 19550549 - 19550504
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  19550549 catataatatgcaatatccctaccaactgagctaagctcacgggga 19550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1571 - 1608
Target Start/End: Complemental strand, 21405198 - 21405161
Alignment:
Q  1571 atgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  21405198 atgcaatatcccttccaactgaggtaagctcacgggga 21405161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 22472341 - 22472386
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| ||||||||||| || ||||||| ||||||||||||||||    
T  22472341 catataatatgcaatatctctaccaactgagttaagctcacgggga 22472386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1606
Target Start/End: Original strand, 29373470 - 29373519
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||| |||||| |||||||||||| | ||||||| ||||||||||||||    
T  29373470 cccctgcatataatatgcaatatccttaccaactgagttaagctcacggg 29373519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 31327528 - 31327573
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  31327528 catataatatgcaatatccctaccaactgagctaagctcacgggga 31327573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 31327745 - 31327790
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  31327745 catataatatgcaatatccctaccaactgagctaagctcacgggga 31327790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 34102569 - 34102683
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  34102569 tagtggctagagctcacacagttt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 34102666  T
Q  1592 ggttaagctcacgggga 1608  Q
       ||||||||||||||    
T  34102667 aactaagctcacgggga 34102683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1610
Target Start/End: Complemental strand, 36763478 - 36763425
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggggaca 1610  Q
    ||||| ||||||||||||||| ||||| ||||||| |  |||||||||||||||    
T  36763478 cccctgcatatattatgcaatgtccctaccaactgagccaagctcacggggaca 36763425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 37800638 - 37800683
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  37800638 catataatatgcaatatccctaccaactgagctaagctcacgggga 37800683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 40192199 - 40192154
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  40192199 catataatatgcaatatccctaccaactgagctaagctcacgggga 40192154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 40548346 - 40548301
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  40548346 catataatatgcaatatccctaccaactgagctaagctcacgggga 40548301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 40933858 - 40933903
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  40933858 catataatatgcaatatccctaccaactgagctaagctcacgggga 40933903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 41936365 - 41936479
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  41936365 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 41936462  T
Q  1592 ggttaagctcacgggga 1608  Q
     | |||||| |||||||    
T  41936463 agctaagcttacgggga 41936479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 44364064 - 44364019
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||| ||||||||||    
T  44364064 catataatatgcaatatccctaccaactgagttaaactcacgggga 44364019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 44652009 - 44652054
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  44652009 catataatatgcaatatccctaccaactgagctaagctcacgggga 44652054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 45701387 - 45701342
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  45701387 catataatatgcaatatccctaccaactgagctaagctcacgggga 45701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 50496841 - 50496886
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  50496841 catataatatgcaatatccctaccaactgagctaagctcacgggga 50496886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 52410268 - 52410313
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  52410268 catataatatgcaatatccctaccaactgagctaagctcacgggga 52410313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 53432695 - 53432809
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  53432695 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 53432792  T
Q  1592 ggttaagctcacgggga 1608  Q
     ||||| ||||| ||||    
T  53432793 agttaaactcacaggga 53432809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000003; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1542 - 1608
Target Start/End: Complemental strand, 5900356 - 5900290
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||| |||||  ||||| |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  5900356 ggggttcgaacccggcccctgcatataatatgcaatatccctaccaactgagttaagctcacgggga 5900290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1517 - 1609
Target Start/End: Complemental strand, 3198417 - 3198324
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||| || || | ||||| | ||||||| |||| |||||||| ||||||||||||||| ||||| ||||||| | |||||||||||||||    
T  3198417 ttaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagctcacggggac 3198324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1552 - 1605
Target Start/End: Complemental strand, 10241779 - 10241726
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  10241779 cccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 10241726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1552 - 1604
Target Start/End: Complemental strand, 2363023 - 2362971
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||||||| |||||| |||||||||||||| ||||||| ||||||||||||    
T  2363023 cccaacccctgcatataatatgcaatatccctaccaactgagttaagctcacg 2362971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 12891606 - 12891555
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  12891606 cccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 12891555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 26912882 - 26912831
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| |||| || ||||||||||||||||    
T  26912882 cccctacatataatatgcaatatccctaccaattgagttaagctcacgggga 26912831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1556 - 1605
Target Start/End: Complemental strand, 546852 - 546803
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||||    
T  546852 acccctgcatataatatgcaatatccctaccaactgagttaagctcacgg 546803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 8241162 - 8241048
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||| | |||||||||||||||  |||||| || || ||||||| | ||||||| |||||  |||| | |||||| |||||||||||||| |||||||    
T  8241162 tagtggttagagctcacacatttt--aaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatccctaccaactg 8241065  T
Q  1592 ggttaagctcacgggga 1608  Q
     | |||||||| |||||    
T  8241064 agctaagctcatgggga 8241048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 40091520 - 40091475
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  40091520 catataatatgcaatatccctaccaactgagttaagctcacgggga 40091475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Original strand, 33736034 - 33736086
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  33736034 acccctgcatataatatgcaatatccctaccaactgagttaagctcccgggga 33736086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Original strand, 17545193 - 17545244
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17545193 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 17545244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1493 - 1606
Target Start/End: Complemental strand, 41930217 - 41930105
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| ||||||||| ||||| | ||||| ||||||  |||||||||||||  ||||||    
T  41930217 tagtggctagagctcacacaattt--aattgtagagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctatcaactg 41930120  T
Q  1592 ggttaagctcacggg 1606  Q
     |||||| |||||||    
T  41930119 agttaagttcacggg 41930105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1542 - 1608
Target Start/End: Complemental strand, 1743191 - 1743125
Alignment:
Q  1542 ggggttcaaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||| |||||  | ||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  1743191 ggggttcgaacccggctcctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 1743125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1558 - 1604
Target Start/End: Complemental strand, 6414116 - 6414070
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||| |||||| |||||||||||||| ||||||| ||||||||||||    
T  6414116 ccctgcatataatatgcaatatccctaccaactgagttaagctcacg 6414070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1493 - 1605
Target Start/End: Original strand, 11786018 - 11786129
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||| |||  |||||||| |||| || ||||| ||||||  ||||||||||||| |||||||    
T  11786018 tagtggctagagctcacacaattt--aattgtggagaagtggagtgtgtggggttcgaacctcagcccctgcatataaaatgcaatatccctaccaactg 11786115  T
Q  1592 ggttaagctcacgg 1605  Q
     |||||||||||||    
T  11786116 agttaagctcacgg 11786129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1613
Target Start/End: Complemental strand, 16603441 - 16603391
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    |||||| |||||||||||||| ||||||| | |||||||||||||| ||||    
T  16603441 catataatatgcaatatccctaccaactgagctaagctcacggggataaca 16603391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 4417712 - 4417757
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  4417712 catataatatgcaatatccctaccaactgagctaagctcacgggga 4417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 6518803 - 6518848
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  6518803 catataatatgcaatatccctaccaactgagctaagctcacgggga 6518848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 9125773 - 9125661
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaacccctacatatattatgcaatatcccttccaactgg 1592  Q
    |||||||| |||||||||||| |   |||||| || || || |||| | ||||||| |||||   |||| |||||| ||||||||||| || |||||||     
T  9125773 tagtggctagagctcacacatat---aaatgtggagaagtgaggtgtccggggttcgaaccccggccctgcatataatatgcaatatcgctaccaactga 9125677  T
Q  1593 gttaagctcacgggga 1608  Q
    | ||||||||||||||    
T  9125676 gctaagctcacgggga 9125661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 9835076 - 9835031
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9835076 catataatatgcaatatccctaccaactgagctaagctcacgggga 9835031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 11897291 - 11897246
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  11897291 catataatatgcaatatccctaccaactgagctaagctcacgggga 11897246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 12463799 - 12463754
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  12463799 catataatatgcaatatccctaccaactgagctaagctcacgggga 12463754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1552 - 1613
Target Start/End: Original strand, 19891442 - 19891503
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    |||||||||| ||||||  ||||||||||| | ||||||| |||||||||||| ||| ||||    
T  19891442 cccaacccctgcatataaaatgcaatatccttaccaactgagttaagctcacgaggataaca 19891503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 21918095 - 21918050
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  21918095 catataatatgcaatatccctaccaactgagctaagctcacgggga 21918050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 21962132 - 21962177
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| | |||||||||||| ||||||| ||||||||||||||||    
T  21962132 catataatttgcaatatccctgccaactgagttaagctcacgggga 21962177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 27765300 - 27765255
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  27765300 catataatatgcaatatccctaccaactgagctaagctcacgggga 27765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Original strand, 31074150 - 31074199
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||||  ||| ||||||||| ||||||| ||||||||||||||||    
T  31074150 cctacatataaaatgtaatatccctaccaactgagttaagctcacgggga 31074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 32505731 - 32505686
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  32505731 catataatatgcaatatccctaccaactgagctaagctcacgggga 32505686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1559 - 1608
Target Start/End: Original strand, 39886235 - 39886284
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||| |||||||||||||| ||||||| | || |||||||||||    
T  39886235 cctacatataatatgcaatatccctaccaactgagctatgctcacgggga 39886284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 41179830 - 41179875
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  41179830 catataatatgcaatatccctaccaactgagctaagctcacgggga 41179875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 42320360 - 42320315
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  42320360 catataatatgcaatatccctaccaactgagctaagctcacgggga 42320315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.00000000001; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 48638644 - 48638530
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| ||||||||| ||||| | ||||| ||||||  ||||||||||||| |||||||    
T  48638644 tagtggctagagctcacacagttt--aattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctaccaactg 48638547  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  48638546 agctaagctcacgggga 48638530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 42054382 - 42054331
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  42054382 cccctacatataatatgcaatatccctaccaactgagctaagctcacgggga 42054331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Original strand, 4865842 - 4865892
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  4865842 acccctacatatattatgcaatgtccctaccaactgagttaagctaacggg 4865892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1552 - 1606
Target Start/End: Complemental strand, 15390274 - 15390220
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||||| ||| || |||||||||||||| ||||||| ||||||||||||||    
T  15390274 cccaacccctgcatctaatatgcaatatccctaccaactgagttaagctcacggg 15390220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1558 - 1604
Target Start/End: Original strand, 47478870 - 47478916
Alignment:
Q  1558 ccctacatatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  47478870 ccctacatataatatgcaatatccctaccaactgagttaagctcacg 47478916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1517 - 1613
Target Start/End: Complemental strand, 1247345 - 1247248
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacggggacaaca 1613  Q
    |||||||| || || || |||| ||||||||| |||| | |||||| |||| |||||||||||||| |  |||||| ||||||||||| |||||||||    
T  1247345 ttaaatgtggagaagtgaggtgtctggggttcgaacctcgacccctgcataaattatgcaatatccttatcaactgagttaagctcacagggacaaca 1247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Complemental strand, 21265768 - 21265654
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  21265768 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 21265671  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  21265670 agctaagctcacgggga 21265654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 26550537 - 26550492
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  26550537 catatagtatgcaatatccctaccaactgagttaagctcacgggga 26550492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1532 - 1608
Target Start/End: Original strand, 42490405 - 42490482
Alignment:
Q  1532 tggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||| | ||||||| |||||  |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  42490405 tggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 42490482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 44732676 - 44732631
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  44732676 catataatatgcaatatccctaccaactgagttaagctcacgggga 44732631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1517 - 1609
Target Start/End: Original strand, 47469053 - 47469146
Alignment:
Q  1517 ttaaatgttgaaaattggggtggctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacggggac 1609  Q
    |||||||| || || ||||||| | ||||||| |||| || ||||| |||| |||||||||| ||||| ||||||| | |||||||||||||||    
T  47469053 ttaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccctgccaactgagctaagctcacggggac 47469146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Complemental strand, 3269673 - 3269617
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  3269673 cccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 3269617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1559 - 1603
Target Start/End: Original strand, 3694938 - 3694982
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    |||||||||| |||||||||||||||||||||| | |||||||||    
T  3694938 cctacatataatatgcaatatcccttccaactgagctaagctcac 3694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1552 - 1608
Target Start/End: Original strand, 7166243 - 7166299
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||| ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  7166243 cccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 7166299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Complemental strand, 8865904 - 8865852
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  8865904 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 8865852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1556 - 1608
Target Start/End: Original strand, 35605643 - 35605695
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  35605643 acccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 35605695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 22563435 - 22563384
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  22563435 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 22563384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1557 - 1608
Target Start/End: Complemental strand, 33207254 - 33207203
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  33207254 cccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 33207203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1563 - 1605
Target Start/End: Original strand, 8984532 - 8984574
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||| |||||||||||||| ||||||| |||||||||||||    
T  8984532 catataatatgcaatatccctgccaactgagttaagctcacgg 8984574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1556 - 1606
Target Start/End: Original strand, 9866204 - 9866254
Alignment:
Q  1556 acccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||| |||||||||||||| ||||||| | ||||||||||||    
T  9866204 acccctgcatataatatgcaatatccctaccaactgagctaagctcacggg 9866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1540 - 1605
Target Start/End: Complemental strand, 11215068 - 11215002
Alignment:
Q  1540 ctggggttcaaacc-caacccctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    ||||||||| |||| || ||||| |||||| |||||||||||||| ||||||| | |||||||||||    
T  11215068 ctggggttcgaacctcagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgg 11215002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 1570219 - 1570264
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  1570219 catataatatgcaatatccctaccaactgagctaagctcacgggga 1570264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 2556623 - 2556554
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | |||||| |||||||    
T  2556623 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagcttacgggga 2556554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 4482625 - 4482670
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  4482625 catataatatgcaatatccctaccaactgagctaagctcacgggga 4482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 6438091 - 6438136
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  6438091 catataatatgcaatatccctaccaactgagctaagctcacgggga 6438136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 6702619 - 6702574
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  6702619 catataatatgcaatatccctaccaactgagctaagctcacgggga 6702574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 10664821 - 10664866
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  10664821 catataatatgcaatatccctaccaactgagctaagctcacgggga 10664866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 15819628 - 15819673
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  15819628 catataatatgcaatatccctaccaactgagctaagctcacgggga 15819673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 18467201 - 18467270
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | || |||||||||||    
T  18467201 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctatgctcacgggga 18467270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 25999893 - 25999848
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  25999893 catataatatgcaatatccctaccaactgagctaagctcacgggga 25999848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 26584773 - 26584818
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  26584773 catataatatgcaatatccctaccaactgagctaagctcacgggga 26584818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1561 - 1610
Target Start/End: Original strand, 30678832 - 30678881
Alignment:
Q  1561 tacatatattatgcaatatcccttccaactgggttaagctcacggggaca 1610  Q
    ||||||||||||||| | ||||| ||||||| |||||||||||| |||||    
T  30678832 tacatatattatgcattgtccctaccaactgagttaagctcacgaggaca 30678881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 32594294 - 32594249
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  32594294 catataatatgcaatatccctaccaactgagctaagctcacgggga 32594249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 33254771 - 33254726
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  33254771 catataatatgcaatatccctaccaactgagctaagctcacgggga 33254726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 33274943 - 33274898
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  33274943 catataatatgcaatatccctaccaactgagctaagctcacgggga 33274898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1493 - 1604
Target Start/End: Original strand, 37662515 - 37662625
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaaccca-acccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||| ||||||||||||| |||  || ||| || || ||||||| | |||||||  ||||  |||||| |||||| |||||||||||||| |||||||    
T  37662515 tagtggttggagctcacacaattt--aactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgcaatatccctaccaactg 37662612  T
Q  1592 ggttaagctcacg 1604  Q
     | ||||||||||    
T  37662613 agctaagctcacg 37662625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 40519571 - 40519616
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  40519571 catataatatgcaatatccctaccaactgagctaagctcacgggga 40519616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Original strand, 45333715 - 45333783
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| ||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  45333715 ctggggttcgaaccccagcccctgcatatat-atgcaatatccctgccaactgagctaagctcacgggga 45333783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 46965783 - 46965738
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  46965783 catataatatgcaatatccctaccaactgagctaagctcacgggga 46965738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 50899537 - 50899582
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  50899537 catataatatgcaatatccctaccaactgagctaagctcacgggga 50899582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 51050257 - 51050188
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| ||| |||||||||| ||||||| | ||||||||||||||    
T  51050257 ctggggttcgaaccccatcccctgcatataatatacaatatccctaccaactgagctaagctcacgggga 51050188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1540 - 1607
Target Start/End: Complemental strand, 21331 - 21263
Alignment:
Q  1540 ctggggttc-aaacccaacccctacatatattatgcaatatcccttccaactgggttaagctcacgggg 1607  Q
    ||||||||| ||||||||||||| |||||| |||||||||||||| ||||||  | |||||||||||||    
T  21331 ctggggttcgaaacccaacccctgcatataatatgcaatatccctaccaactaagctaagctcacgggg 21263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1555 - 1606
Target Start/End: Original strand, 50020 - 50071
Alignment:
Q  1555 aacccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||||||||||| ||||||||||||||  |||||| ||||||||||||||    
T  50020 aacccctacatataatatgcaatatccctatcaactgagttaagctcacggg 50071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1552 - 1603
Target Start/End: Original strand, 65803 - 65854
Alignment:
Q  1552 cccaacccctacatatattatgcaatatcccttccaactgggttaagctcac 1603  Q
    ||||||||||||||||| |||||||||||||| ||||||| | |||||||||    
T  65803 cccaacccctacatataatatgcaatatccctaccaactgagctaagctcac 65854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1540 - 1608
Target Start/End: Complemental strand, 46593 - 46524
Alignment:
Q  1540 ctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    ||||||||| ||||| | ||||| |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  46593 ctggggttcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagctcacgggga 46524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1493 - 1608
Target Start/End: Original strand, 10784 - 10898
Alignment:
Q  1493 tagtggctggagctcacacattttttaaatgttgaaaattggggtggctggggttcaaacccaa-cccctacatatattatgcaatatcccttccaactg 1591  Q
    |||||||| ||||||||||| |||  || ||| || || ||||||| | ||||||| |||||   ||||| |||||| |||||||||||||| |||||||    
T  10784 tagtggctagagctcacacaattt--aattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactg 10881  T
Q  1592 ggttaagctcacgggga 1608  Q
     | ||||||||||||||    
T  10882 agctaagctcacgggga 10898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 112151 - 112106
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||    
T  112151 catataatatgcaatatccctaccaactgagttaagctcacgggga 112106  T

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Target: scaffold0690 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1563 - 1606
Target Start/End: Complemental strand, 3709 - 3666
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||    
T  3709 catataatatgcaatatccctaccaactgagttaagctcacggg 3666  T

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Target: scaffold0330 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1559 - 1605
Target Start/End: Complemental strand, 6815 - 6769
Alignment:
Q  1559 cctacatatattatgcaatatcccttccaactgggttaagctcacgg 1605  Q
    |||||||||| |||||||||||||| ||||||| |||||| ||||||    
T  6815 cctacatataatatgcaatatccctaccaactgagttaagttcacgg 6769  T

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Target: scaffold0707 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 47 - 92
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  47 catataatatgcaatatccctaccaactgagctaagctcacgggga 92  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 9009 - 8964
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  9009 catataatatgcaatatccctaccaactgagctaagctcacgggga 8964  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 4041 - 4086
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  4041 catataatatgcaatatccctaccaactgagctaagctcacgggga 4086  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 17663 - 17618
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  17663 catataatatgcaatatccctaccaactgagctaagctcacgggga 17618  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1557 - 1606
Target Start/End: Complemental strand, 56372 - 56323
Alignment:
Q  1557 cccctacatatattatgcaatatcccttccaactgggttaagctcacggg 1606  Q
    ||||| |||||| |||||||||||||| |||| || ||||||||||||||    
T  56372 cccctgcatataatatgcaatatccctgccaattgagttaagctcacggg 56323  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1604
Target Start/End: Original strand, 37441 - 37482
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacg 1604  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  37441 catataatatgcaatatccctaccaactgagttaagctcacg 37482  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Complemental strand, 59826 - 59781
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  59826 catataatatgcaatatccctaccaactgagctaagctcacgggga 59781  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1563 - 1608
Target Start/End: Original strand, 266724 - 266769
Alignment:
Q  1563 catatattatgcaatatcccttccaactgggttaagctcacgggga 1608  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||    
T  266724 catataatatgcaatatccctaccaactgagctaagctcacgggga 266769  T

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