View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7647_high_1 (Length: 390)
Name: NF7647_high_1
Description: NF7647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7647_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 370
Target Start/End: Original strand, 40750177 - 40750546
Alignment:
| Q |
1 |
cagaaagcagctcaaataggttcaacaagaagcagtactaatccttccatttttagtggaagttttggtgtaatgagttcatcctctacacaaacaacga |
100 |
Q |
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| T |
40750177 |
cagaaagcagctcaaataggttcaacaagaagcagtactaatccttccatatttagtggaagttttggtgtaatgagttcatcctctacacaaacaacga |
40750276 |
T |
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| Q |
101 |
gtttaaacaaaaaccatgatgaggttaatatggtcattaatcagaaaatgaagcagcatgagaattttgatccaagtagtagtagaagtgcaactatggt |
200 |
Q |
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| T |
40750277 |
gtttaaacaaaaaccatgatgaggttaatatggtcattaatcagaaaatgaagcagcatgagaattttgatccaagtagtagtagaagtgcaactatggt |
40750376 |
T |
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| Q |
201 |
tggtaattctagtgggtttagagattttcttggagtgagtaaccatcaatttctacctcaagagcttgcaaagtttgcttccataaattcaccgatgatg |
300 |
Q |
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| T |
40750377 |
tggtaattctagtgggtttagagattttcttggagtgagtaaccatcaatttctacctcaagagcttgcaaagtttgcttccataaattcaacgatgatg |
40750476 |
T |
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| Q |
301 |
agtttaaatcaattcaatgctgggtgcatcaatgaaaattaattagtccttaattaagtgttgactataa |
370 |
Q |
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| T |
40750477 |
agtttaaatcaattcaatgctgggtgcatcaatgaaaattaattagtccttaattaagtgttgactataa |
40750546 |
T |
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