View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7647_high_2 (Length: 229)
Name: NF7647_high_2
Description: NF7647
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7647_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 5 - 229
Target Start/End: Original strand, 40749846 - 40750070
Alignment:
| Q |
5 |
cagagctttctgcgacgcattagccgtagaaagtgcaagacactcatctcctacaactctaaatttccagaatgaagagtccaatatgatgaacacacaa |
104 |
Q |
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| T |
40749846 |
cagagctttctgcgacgcattagccgtagaaagtgcaagacactcatctcctacaactctaaatttccagaatgaagagtccaatatgatgaacacacaa |
40749945 |
T |
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| Q |
105 |
actagtttggcccatggattgatatcatctcaaggacttcaaaatcttcaacagtttagtccacatgcaggatttcatcatgagcaaagaccaaacttgt |
204 |
Q |
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| T |
40749946 |
actagtttggcccatggattgatatcatctcaaggacttcaaaatattcaacaatttagtccacatgcaggatttcatcatgagcaaagaccaaatttgt |
40750045 |
T |
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| Q |
205 |
cactgtggttgaaccaagaaaatca |
229 |
Q |
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| T |
40750046 |
cactgtggttgaaccaagaaaatca |
40750070 |
T |
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