View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7649_low_2 (Length: 282)

Name: NF7649_low_2
Description: NF7649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7649_low_2
NF7649_low_2
[»] chr3 (22 HSPs)
chr3 (10-275)||(14865711-14865976)
chr3 (8-275)||(17131595-17131862)
chr3 (8-270)||(12033375-12033636)
chr3 (22-269)||(19235002-19235245)
chr3 (145-270)||(23370435-23370560)
chr3 (128-275)||(51301572-51301720)
chr3 (68-257)||(13302185-13302372)
chr3 (68-257)||(13312841-13313028)
chr3 (68-257)||(13323732-13323920)
chr3 (141-214)||(10389429-10389502)
chr3 (141-214)||(10414518-10414591)
chr3 (141-214)||(10421188-10421261)
chr3 (148-241)||(24933787-24933880)
chr3 (61-199)||(17240513-17240652)
chr3 (145-199)||(9534328-9534382)
chr3 (145-199)||(18929246-18929300)
chr3 (187-275)||(10555353-10555439)
chr3 (145-197)||(20247791-20247843)
chr3 (145-197)||(24192957-24193009)
chr3 (148-200)||(41455097-41455149)
chr3 (145-200)||(16801467-16801521)
chr3 (145-199)||(14762758-14762812)
[»] scaffold0053 (1 HSPs)
scaffold0053 (10-275)||(79414-79680)
[»] chr1 (10 HSPs)
chr1 (9-275)||(20851057-20851323)
chr1 (9-275)||(20857684-20857950)
chr1 (9-275)||(21706140-21706406)
chr1 (8-275)||(21710682-21710948)
chr1 (147-241)||(20044910-20045004)
chr1 (126-199)||(18712780-18712854)
chr1 (145-199)||(20437024-20437078)
chr1 (145-199)||(32651573-32651627)
chr1 (148-200)||(41112038-41112090)
chr1 (145-199)||(19663517-19663571)
[»] chr8 (8 HSPs)
chr8 (9-275)||(24320595-24320861)
chr8 (22-199)||(29643386-29643564)
chr8 (145-275)||(44477623-44477754)
chr8 (145-275)||(44492781-44492912)
chr8 (114-199)||(18614240-18614327)
chr8 (61-199)||(23482053-23482192)
chr8 (145-197)||(8727735-8727787)
chr8 (148-200)||(23866618-23866670)
[»] chr7 (26 HSPs)
chr7 (10-275)||(16090940-16091206)
chr7 (8-275)||(20906386-20906652)
chr7 (10-275)||(29181033-29181299)
chr7 (100-275)||(2971209-2971384)
chr7 (141-275)||(14319554-14319688)
chr7 (8-106)||(2966828-2966926)
chr7 (28-260)||(2465246-2465474)
chr7 (141-275)||(14230777-14230911)
chr7 (28-260)||(3857308-3857536)
chr7 (145-270)||(14567204-14567329)
chr7 (147-214)||(31155396-31155463)
chr7 (145-199)||(11382871-11382925)
chr7 (145-199)||(11389348-11389402)
chr7 (145-207)||(21230952-21231014)
chr7 (145-200)||(14422985-14423040)
chr7 (145-199)||(16009577-16009631)
chr7 (148-200)||(12590643-12590695)
chr7 (148-200)||(13007435-13007487)
chr7 (145-201)||(20311050-20311106)
chr7 (145-199)||(13679494-13679548)
chr7 (145-199)||(15168176-15168230)
chr7 (148-200)||(12709843-12709895)
chr7 (148-200)||(13122914-13122966)
chr7 (148-200)||(13743712-13743764)
chr7 (145-197)||(16677296-16677348)
chr7 (145-197)||(17651532-17651584)
[»] chr5 (21 HSPs)
chr5 (9-275)||(19236765-19237030)
chr5 (9-275)||(22461020-22461286)
chr5 (9-275)||(22467644-22467910)
chr5 (28-269)||(20772854-20773090)
chr5 (28-269)||(20781629-20781865)
chr5 (22-269)||(24929862-24930105)
chr5 (22-275)||(28909215-28909466)
chr5 (22-275)||(28945610-28945861)
chr5 (22-275)||(28895967-28896218)
chr5 (22-275)||(28924793-28925044)
chr5 (22-275)||(28889263-28889514)
chr5 (31-208)||(20820105-20820279)
chr5 (31-208)||(20827205-20827379)
chr5 (22-207)||(34829962-34830146)
chr5 (145-265)||(38144472-38144591)
chr5 (61-199)||(18407944-18408083)
chr5 (61-199)||(23111200-23111339)
chr5 (145-201)||(22438746-22438802)
chr5 (145-199)||(19512387-19512441)
chr5 (145-199)||(28370055-28370109)
chr5 (148-200)||(23528634-23528686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (10-275)||(49894-50161)
[»] chr6 (26 HSPs)
chr6 (9-275)||(20007872-20008138)
chr6 (22-269)||(9099005-9099248)
chr6 (28-260)||(21364423-21364650)
chr6 (28-260)||(23968405-23968632)
chr6 (22-270)||(31252300-31252549)
chr6 (147-275)||(11288596-11288721)
chr6 (147-214)||(15458492-15458559)
chr6 (147-214)||(15465087-15465154)
chr6 (145-275)||(34639910-34640041)
chr6 (145-275)||(34646584-34646715)
chr6 (172-275)||(28288437-28288537)
chr6 (145-207)||(10986173-10986235)
chr6 (182-275)||(24563475-24563569)
chr6 (145-200)||(29614146-29614201)
chr6 (145-199)||(4477858-4477912)
chr6 (145-199)||(23839199-23839253)
chr6 (145-207)||(24512836-24512898)
chr6 (238-275)||(24641607-24641644)
chr6 (148-200)||(12168366-12168418)
chr6 (148-200)||(19287275-19287327)
chr6 (148-200)||(19785869-19785921)
chr6 (148-200)||(19878459-19878511)
chr6 (145-200)||(930095-930150)
chr6 (145-200)||(18800438-18800493)
chr6 (147-199)||(9187498-9187550)
chr6 (148-200)||(19884235-19884287)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-275)||(135304-135568)
[»] chr2 (14 HSPs)
chr2 (8-249)||(25180880-25181121)
chr2 (9-247)||(10441-10679)
chr2 (141-275)||(27207644-27207778)
chr2 (141-275)||(26885179-26885312)
chr2 (22-275)||(23168224-23168480)
chr2 (22-275)||(23579481-23579737)
chr2 (61-199)||(23265058-23265197)
chr2 (61-199)||(23280126-23280265)
chr2 (182-275)||(27366472-27366566)
chr2 (148-275)||(5705947-5706075)
chr2 (145-199)||(6483718-6483772)
chr2 (145-199)||(6487185-6487239)
chr2 (145-199)||(21908360-21908414)
chr2 (148-200)||(26583830-26583882)
[»] chr4 (7 HSPs)
chr4 (10-238)||(16146791-16147020)
chr4 (22-207)||(27906142-27906328)
chr4 (86-197)||(14486601-14486713)
chr4 (148-275)||(53483708-53483836)
chr4 (145-201)||(15408140-15408196)
chr4 (145-200)||(11848114-11848169)
chr4 (148-200)||(8045832-8045884)
[»] scaffold1318 (1 HSPs)
scaffold1318 (61-275)||(1837-2051)
[»] scaffold0348 (1 HSPs)
scaffold0348 (10-205)||(9201-9396)
[»] scaffold0131 (1 HSPs)
scaffold0131 (35-275)||(889-1126)
[»] scaffold0127 (1 HSPs)
scaffold0127 (61-270)||(10156-10364)
[»] scaffold0001 (1 HSPs)
scaffold0001 (66-275)||(492953-493162)
[»] scaffold1469 (1 HSPs)
scaffold1469 (22-214)||(1234-1424)
[»] scaffold0384 (1 HSPs)
scaffold0384 (29-241)||(16023-16233)
[»] scaffold0553 (2 HSPs)
scaffold0553 (145-270)||(10125-10250)
scaffold0553 (172-241)||(11042-11111)
[»] scaffold0544 (1 HSPs)
scaffold0544 (145-270)||(1455-1580)
[»] scaffold0029 (3 HSPs)
scaffold0029 (28-260)||(91144-91374)
scaffold0029 (28-260)||(96870-97100)
scaffold0029 (147-200)||(111885-111938)
[»] scaffold0609 (1 HSPs)
scaffold0609 (22-275)||(5781-6035)
[»] scaffold0720 (1 HSPs)
scaffold0720 (141-275)||(3327-3461)
[»] scaffold0183 (1 HSPs)
scaffold0183 (147-269)||(6-125)
[»] scaffold0261 (1 HSPs)
scaffold0261 (22-207)||(23562-23748)
[»] scaffold0249 (1 HSPs)
scaffold0249 (147-214)||(13880-13947)
[»] scaffold0026 (2 HSPs)
scaffold0026 (145-275)||(111686-111817)
scaffold0026 (145-200)||(11850-11905)
[»] scaffold0034 (1 HSPs)
scaffold0034 (22-207)||(73161-73347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (22-207)||(40524-40711)
[»] scaffold0453 (1 HSPs)
scaffold0453 (141-204)||(10546-10609)
[»] scaffold0222 (1 HSPs)
scaffold0222 (61-199)||(16736-16875)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-201)||(135349-135530)
[»] scaffold2054 (1 HSPs)
scaffold2054 (147-200)||(717-770)
[»] scaffold0099 (1 HSPs)
scaffold0099 (22-198)||(12833-13019)
[»] scaffold0146 (1 HSPs)
scaffold0146 (61-199)||(13548-13687)
[»] scaffold0129 (1 HSPs)
scaffold0129 (148-275)||(45198-45326)
[»] scaffold0004 (1 HSPs)
scaffold0004 (126-199)||(116877-116951)
[»] scaffold0235 (1 HSPs)
scaffold0235 (146-257)||(22536-22646)
[»] scaffold0924 (1 HSPs)
scaffold0924 (145-200)||(750-805)
[»] scaffold0461 (1 HSPs)
scaffold0461 (61-199)||(8-147)
[»] scaffold0247 (1 HSPs)
scaffold0247 (145-200)||(11342-11397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (145-200)||(30858-30913)
[»] scaffold0020 (1 HSPs)
scaffold0020 (126-199)||(101928-102002)
[»] scaffold0796 (2 HSPs)
scaffold0796 (148-241)||(1691-1784)
scaffold0796 (148-241)||(5714-5807)
[»] scaffold0310 (1 HSPs)
scaffold0310 (145-201)||(17644-17700)
[»] scaffold0025 (1 HSPs)
scaffold0025 (145-197)||(14398-14450)
[»] scaffold0456 (2 HSPs)
scaffold0456 (145-200)||(932-987)
scaffold0456 (145-200)||(8077-8132)
[»] scaffold0090 (1 HSPs)
scaffold0090 (145-200)||(18170-18225)
[»] scaffold1461 (1 HSPs)
scaffold1461 (141-199)||(1485-1543)
[»] scaffold0317 (1 HSPs)
scaffold0317 (145-199)||(1387-1441)
[»] scaffold0124 (1 HSPs)
scaffold0124 (145-199)||(34276-34330)
[»] scaffold1773 (1 HSPs)
scaffold1773 (148-209)||(1181-1242)
[»] scaffold0117 (2 HSPs)
scaffold0117 (147-200)||(1897-1950)
scaffold0117 (147-200)||(8574-8627)
[»] scaffold0058 (1 HSPs)
scaffold0058 (148-200)||(294-346)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-200)||(50182-50234)


Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 14865711 - 14865976
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  14865711 atcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaatcatcattaaccattatt 14865810  T
Q  110 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14865811 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 14865910  T
Q  210 gacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14865911 gacaaatagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 14865976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 17131595 - 17131862
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 107  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |    
T  17131595 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaa 17131694  T
Q  108 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17131695 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 17131794  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17131795 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 17131862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 8 - 270
Target Start/End: Complemental strand, 12033636 - 12033375
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 107  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12033636 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaaccctta 12033537  T
Q  108 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12033536 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 12033437  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 270  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12033436 aagacaa-aagcacatcaaatcagttcctaagttcttctctcttggtcttctctccttacctt 12033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 19235245 - 19235002
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||||    
T  19235245 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaatttta 19235148  T
Q  122 ccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||      
T  19235147 ccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtg 19235050  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 269  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  19235049 cagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 19235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 23370560 - 23370435
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  23370560 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 23370461  T
Q  245 ctctcttggtcttctctccttgcctt 270  Q
    ||||||||||||||||||||||||||    
T  23370460 ctctcttggtcttctctccttgcctt 23370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 275
Target Start/End: Original strand, 51301572 - 51301720
Alignment:
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagca 225  Q
    ||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||| |||||||    | ||||||     
T  51301572 gaacaattcaattgattaattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgcgaagacaaagaaaacacagc- 51301670  T
Q  226 aatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||  |||   ||||||||||||||||||||||||||||||||| ||||    
T  51301671 aatcgattctctagttcttctctcttggtcttctctccttgccttagctt 51301720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 257
Target Start/End: Complemental strand, 13302372 - 13302185
Alignment:
Q  68 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 166  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||| ||||| ||| ||||||| | || ||||||||||||||||||||| ||||||    
T  13302372 attcttacaccattcctttcgaagtcatcatcaaccctaaattcccca-ttttatcttcaagaacaatgcatttgattaattttcagaaattacatatta 13302274  T
Q  167 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 257  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13302273 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13302185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 257
Target Start/End: Complemental strand, 13313028 - 13312841
Alignment:
Q  68 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatatta 166  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || ||| |||||| ||| ||||||| | || |||||||||||||| |||||| ||||||    
T  13313028 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-ccctattttatcttcaagaacaatccatttgattaattttcaaaaattacatatta 13312930  T
Q  167 tgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 257  Q
    ||| ||||||||||||||| |||||||||||||||||||   ||| ||  | ||||||||||||||||||| |||| |||| |||| ||||    
T  13312929 tgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaacacagcaaatcagttcctaggttcatctcccttgttctt 13312841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 257
Target Start/End: Complemental strand, 13323920 - 13323732
Alignment:
Q  68 attcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatatt 165  Q
    ||||||| ||| || ||||| || ||||||| |||||| | || |||||||||| ||| ||||||| |  |||| ||||||||||||||||||| |||||    
T  13323920 attcttacaccattcctttcgaagtcatcatcaaccctaaatt-cccaattttatcttcaagaacaatctaatttgattaattttcagaaattacatatt 13323822  T
Q  166 atgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtctt 257  Q
    |||| ||||||||||||||| |||||||||||||||||||   ||| ||  |   ||||||||||||||||| ||||||||| |||| ||||    
T  13323821 atgattattgaaagataatctcacccttaccttagaattg--tagaaaaaaaaatcagcaaatcagttcctaggttcttctcccttgttctt 13323732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 10389502 - 10389429
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10389502 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 10414591 - 10414518
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10414591 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10414518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 10421261 - 10421188
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  10421261 gattacttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 10421188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 24933880 - 24933787
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 241  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||||| |   | ||||| ||| ||||||||| |||||||||    
T  24933880 tttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtt 24933787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 17240652 - 17240513
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  17240652 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 17240555  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  17240554 tatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 9534328 - 9534382
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  9534328 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 18929246 - 18929300
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18929246 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 10555353 - 10555439
Alignment:
Q  187 cacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||||||||||| ||| ||||  || ||  ||||||| | |||||| |||||||||||||||||||| ||||||||| ||||    
T  10555353 cacccttaccttagaattgtaaacacaaa-agtacgacaaatcaatccctaagctcttctctcttggtcttctc-ccttgccttagctt 10555439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 20247843 - 20247791
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  20247843 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 24192957 - 24193009
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  24192957 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 41455149 - 41455097
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41455149 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41455097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 16801521 - 16801467
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||||||||| |||| |||||| ||||| || ||||||||||||||    
T  16801521 aattttcagaaattatatat-atgattattgagagatagtctcacccttaccttag 16801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 14762812 - 14762758
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  14762812 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 275
Target Start/End: Complemental strand, 79680 - 79414
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  79680 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 79581  T
Q  110 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  79580 ttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 79481  T
Q  210 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  79480 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 79414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 20851323 - 20851057
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20851323 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20851224  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20851223 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20851124  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20851123 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 20851057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 20857950 - 20857684
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20857950 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20857851  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20857850 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 20857751  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20857750 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 20857684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 21706140 - 21706406
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  21706140 catcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 21706239  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21706240 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 21706339  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21706340 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 21706406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 275
Target Start/End: Original strand, 21710682 - 21710948
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 107  Q
    |||||| |||||| ||||||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||||| |    
T  21710682 acatcaacaacatagattaaggaatcatactaaacatcaa-gtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaa 21710780  T
Q  108 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21710781 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 21710880  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21710881 aagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 21710948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 241
Target Start/End: Complemental strand, 20045004 - 20044910
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 241  Q
    ||||||||| |||||||||| ||  |||||| ||||||||||||||||||||||||||| |   | ||||| ||||||||||||| |||||||||    
T  20045004 ttttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaagtt 20044910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 18712780 - 18712854
Alignment:
Q  126 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||    
T  18712780 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 20437078 - 20437024
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  20437078 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 32651573 - 32651627
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  32651573 aattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 41112038 - 41112090
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  41112038 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 41112090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 19663571 - 19663517
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  19663571 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 24320861 - 24320595
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||||||||| |||||||| |     
T  24320861 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacctgatccctataccttttctttcaaaatcatccttaaccctaaa 24320762  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24320761 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 24320662  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24320661 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 24320595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 29643564 - 29643386
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    ||||||||||||||||| | || |||| |||||||  |  ||||  ||||||| |||  | ||| | |||||||||| |||||||| || | ||||||||    
T  29643564 gattaagaaatcatactgaacaccaaattacaacacaattaacccaattcttacaccaatccttcctaaatcatcatcaacccttaatt-ctcaatttta 29643466  T
Q  122 ccttaa-gaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
     ||| | ||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  29643465 tcttcatgaacaattcaatttgattaattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 44477623 - 44477754
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 242  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44477623 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44477721  T
Q  243 ttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||| ||||    
T  44477722 ttctctcttggtcttctctccttgccttagctt 44477754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 44492781 - 44492912
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 242  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||  |||||||    | |||||| ||||  |||   |||||    
T  44492781 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgtgaagacaaagaaaacacagc-aatcgattctctagttc 44492879  T
Q  243 ttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||| ||||    
T  44492880 ttctctcttggtcttctctccttgccttagctt 44492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 18614240 - 18614327
Alignment:
Q  114 caattttacctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||| ||| ||||||| |||||||| || |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  18614240 caattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 23482192 - 23482053
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23482192 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23482095  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23482094 tatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 8727787 - 8727735
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    ||||||||||||||||| ||||||| ||||||  ||||||| |||||||||||    
T  8727787 aattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 23866618 - 23866670
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23866618 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 23866670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 16090940 - 16091206
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16090940 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16091039  T
Q  110 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    ||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16091040 ttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16091139  T
Q  210 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16091140 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 16091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 20906652 - 20906386
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 107  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20906652 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaaccctta 20906553  T
Q  108 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20906552 att-cccaattttaccttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 20906454  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    | ||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||    
T  20906453 aggacaaatagctcagcaaatccgttcctaagttcttctctcttggtcttctccccttgccttagctt 20906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 275
Target Start/End: Complemental strand, 29181299 - 29181033
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| ||||||||||||||||||||||||||||||  || |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29181299 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaatcatcattaacccttatt 29181200  T
Q  110 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29181199 ttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 29181100  T
Q  210 gacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29181099 gacaaatagcacagcaaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 29181033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 2971209 - 2971384
Alignment:
Q  100 aacccttattttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  200 gaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2971309 gaattgcaaagacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 2971384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 14319688 - 14319554
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 240  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  14319688 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 14319589  T
Q  241 tcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||| |||||||||||||||||| ||||    
T  14319588 tcttctctcttagtcttctctccttgccttagctt 14319554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 2966828 - 2966926
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctt 106  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2966828 acatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcattaaccctt 2966926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 28 - 260
Target Start/End: Original strand, 2465246 - 2465474
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 127  Q
    ||||||||| ||||||||||| || ||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| || | ||||||| |||    
T  2465246 gaaatcatattaatcatcaaa-tataacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaatttcccaatttttaccataa 2465343  T
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||||||| ||  ||  |||||||    
T  2465344 aaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccacccttaccttagaattgcaaagataa--agtgcagcaaa 2465441  T
Q  228 tcagttcctaagttcttctctcttggtcttctc 260  Q
     || || ||||| ||||||||||||||||||||    
T  2465442 ccaatttctaagctcttctctcttggtcttctc 2465474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 141 - 275
Target Start/End: Original strand, 14230777 - 14230911
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 240  Q
    ||||||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||  |||||  |||||| ||||||||||    
T  14230777 gattaattttcagaaattatacattaaattcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacgacaaatccgttcctaagt 14230876  T
Q  241 tcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||| |||||||||||||||||||||||||| ||||    
T  14230877 tctcctctcttggtcttctctccttgccttagctt 14230911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 3857536 - 3857308
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 124  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  3857536 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 3857440  T
Q  125 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 224  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||| |||| ||  ||  ||||    
T  3857439 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc-aagataa--agtgcagc 3857344  T
Q  225 aaatcagttcctaagttcttctctcttggtcttctc 260  Q
    ||| || || ||||| ||||||||||||||||||||    
T  3857343 aaaccaatttctaagctcttctctcttggtcttctc 3857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 14567204 - 14567329
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 244  Q
    ||||||||||||  ||||||||| |  |||||| | ||  | ||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  14567204 aattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttctt 14567303  T
Q  245 ctctcttggtcttctctccttgcctt 270  Q
    ||||||||||||| ||||||||||||    
T  14567304 ctctcttggtcttttctccttgcctt 14567329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 31155396 - 31155463
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 31155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 11382925 - 11382871
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11382925 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 11389402 - 11389348
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||||||||| |||||| ||||| || |||||||||||||    
T  11389402 aattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 21231014 - 21230952
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    ||||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  21231014 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 21230952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 14422985 - 14423040
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  14422985 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 14423040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 16009577 - 16009631
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  16009577 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 12590695 - 12590643
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12590695 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12590643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 13007435 - 13007487
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13007435 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 13007487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 20311106 - 20311050
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 201  Q
    |||||||||||||||||  |||||| |||||| ||||| || |||||||||||||||    
T  20311106 aattttcagaaattatacgttatgattattgagagatagtctcacccttaccttaga 20311050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 13679494 - 13679548
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  13679494 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 15168176 - 15168230
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  15168176 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 12709895 - 12709843
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12709895 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 12709843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 13122966 - 13122914
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13122966 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13122914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 13743712 - 13743764
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  13743712 tttcaggaattataaattatgattattgagagatagtctcacccttaccttag 13743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 16677296 - 16677348
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  16677296 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17651532 - 17651584
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    |||||| |||||||||| ||||||| |||||| ||||| || |||||||||||    
T  17651532 aatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 19236765 - 19237030
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| |||||||||  |||||||| | ||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  19236765 catcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 19236863  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19236864 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 19236963  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19236964 agacaaaaagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttagctt 19237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 22461020 - 22461286
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22461020 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22461118  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22461119 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22461218  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22461219 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgccttagctt 22461286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 275
Target Start/End: Original strand, 22467644 - 22467910
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| || ||||||| |||||||| ||||||||||| ||| || ||||||||| |||||||||||||||||||| ||||| |||||||| |     
T  22467644 catcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacctgatccttataccttttctttcaaa-tcatccttaaccctaaa 22467742  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22467743 tttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 22467842  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22467843 aagacaaaaggcacagcaaatcagttcttaagttcttctctcttggtcttctctccttgccttagctt 22467910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 28 - 269
Target Start/End: Original strand, 20772854 - 20773090
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 127  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  20772854 gaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaa 20772951  T
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
    |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||    
T  20772952 gaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaa 20773049  T
Q  228 tcagttcctaagttcttctctcttggtcttctctccttgcct 269  Q
    ||| |||||||| |||||||||||||||||||| ||||||||    
T  20773050 tcaattcctaagctcttctctcttggtcttctc-ccttgcct 20773090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 28 - 269
Target Start/End: Original strand, 20781629 - 20781865
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 127  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  20781629 gaaatcataataatcatcaaa-tacaacattataaacctgattcttacacattttctt-caaaatcatcattaaccctaaatttcccaattttaccttaa 20781726  T
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
    |||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||    
T  20781727 gaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgcaaagataa--agtacagcaaa 20781824  T
Q  228 tcagttcctaagttcttctctcttggtcttctctccttgcct 269  Q
    ||| |||||||| |||||||||||||||||||| ||||||||    
T  20781825 tcaattcctaagctcttctctcttggtcttctc-ccttgcct 20781865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 24930105 - 24929862
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||| ||| || |||||||||||||||| | |||||||||||||    
T  24930105 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacatttcctt-cagaatcatcattaaccctaaatttcccaatttta 24930008  T
Q  122 ccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||  ||      
T  24930007 ccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgtaaagataa--agtg 24929910  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 269  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||||    
T  24929909 cagcaagtcaattcctaagctcttctctcttggtcttctc-ccttgcct 24929862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 28909466 - 28909215
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 120  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28909466 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28909369  T
Q  121 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28909368 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28909270  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  28909269 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgccttagctt 28909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 28945861 - 28945610
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 120  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28945861 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28945764  T
Q  121 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||||    
T  28945763 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacgacaa-aagca 28945665  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  28945664 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgccttagctt 28945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 28896218 - 28895967
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 120  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28896218 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28896121  T
Q  121 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28896120 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28896022  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  28896021 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgccttagctt 28895967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 28925044 - 28924793
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 120  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28925044 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28924947  T
Q  121 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28924946 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28924848  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  28924847 cagcaaatcaattcctaggttcttctctcttggtcttctctccttgccttagctt 28924793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 28889514 - 28889263
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt- 120  Q
    ||||| ||||||||||||||||| ||| |||||| | | |||||||| | |||  | ||||||| |||||||||||| || ||| ||||||||||||||     
T  28889514 gattaggaaatcatactaatcattaaa-tacaacgtcataaacctgaattttacgcattttctt-caaaatcatcatcaaacctaattttcccaattttt 28889417  T
Q  121 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||| || ||| | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| | |||  ||||    
T  28889416 accttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccacccttaccttagaattgcaacggcaa-aagca 28889318  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
      |||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  28889317 atgcaaatcaattcctaggttcttctctcttggtcttctctccttgccttagctt 28889263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 20820105 - 20820279
Alignment:
Q  31 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 130  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20820105 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20820201  T
Q  131 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20820202 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 20827205 - 20827379
Alignment:
Q  31 atcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaa 130  Q
    |||||||| ||||||||| |||||||||| |||||||| |||||| | || |||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  20827205 atcatactcatcatcaaa-tacaacattataaacctgaatcttatgcattctctt-caaaatcatcattaaccctaattttcc-aattttaccttaagaa 20827301  T
Q  131 cagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    | ||| ||||  |||||  |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  20827302 cggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccacccttaccttagaattgcaa 20827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 34829962 - 34830146
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||| ||||||||| |||||||    |||| ||||||||| | |||| |||||||||||| ||| | ||||| ||| ||  ||||||    
T  34829962 gattaagaaatcatactgatcatcaaattacaacacattaaacatgattcttacatcttt-ctttcaaaatcagcatcataccctaattctc--aatttt 34830058  T
Q  121 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    | ||| ||||||  ||| ||| |||| |||||||||||||||| ||||  | |||||||||||||||||||||||||||||||||||||    
T  34830059 atcttcaagaactattctattagattgattttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgca 34830146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 265
Target Start/End: Complemental strand, 38144591 - 38144472
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagca-aatcagttcctaagttct 243  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||  ||||| | |  |||| ||||||| |||| |||||||||||||    
T  38144591 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga-atgatta-cacagcacaatcggttcctaagttct 38144494  T
Q  244 tctctcttggtcttctctcctt 265  Q
    ||||||||||||||||||||||    
T  38144493 tctctcttggtcttctctcctt 38144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 18408083 - 18407944
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  18408083 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 18407986  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||||||| |||||| ||||| || |||||||||||||    
T  18407985 tatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 23111339 - 23111200
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| |  |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  23111339 aaacatgattcttacaccatccctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 23111242  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  23111241 tatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 22438802 - 22438746
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 201  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||    
T  22438802 aattttcagaaattatacattatgattattgagagatagtctcacccttaccttaga 22438746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 19512387 - 19512441
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  19512387 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 28370109 - 28370055
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  28370109 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 23528634 - 23528686
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  23528634 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 23528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 275
Target Start/End: Complemental strand, 50161 - 49894
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| |||||||||||||||||||||||||||| |  || || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50161 atcaacaacatggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 50062  T
Q  110 ttcccaatttt-accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50061 ttcccaatttttaccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaa 49962  T
Q  209 agacaattagcacagc-aaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||| ||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  49961 agacaaatagcacaacaaaatcagttcctaagttcttctctcttggttttctctctttgccttagctt 49894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 275
Target Start/End: Complemental strand, 20008138 - 20007872
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| ||| || |||||||||| |||||||| ||||||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||| |     
T  20008138 catcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacctgatccttataccttttctttcaaaatcatccttaaccctaaa 20008039  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaa-ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  20008038 tttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatattatgactattgaaagatgatcccacccttaccttagaattgca 20007939  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20007938 aagacaa-aagcacagcaaatgagttcctaagttcttctctcttggtcttctctccttgccttagctt 20007872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 9099248 - 9099005
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||| || |||||||||||||||| | |||||||||||||    
T  9099248 gattaggaaatcatactaatcatcaaa-tacaacattataaacctgattcttacacattttctt-cagaatcatcattaaccctaaatttcccaatttta 9099151  T
Q  122 ccttaagaacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagca 220  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||      
T  9099150 ccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgcaaagataa--agtg 9099053  T
Q  221 cagcaaatcagttcctaagttcttctctcttggtcttctctccttgcct 269  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  9099052 cagcaaatcaattcctaagctcttctctcttggtcttctc-ccttgcct 9099005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 21364650 - 21364423
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 127  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  21364650 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 21364554  T
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  21364553 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 21364456  T
Q  228 tcagttcctaagttcttctctcttggtcttctc 260  Q
     || |||||| ||||||||||||||||||||||    
T  21364455 acaattcctaggttcttctctcttggtcttctc 21364423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 23968632 - 23968405
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaa 127  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| |  |||||||  |||||   |||||||||| |||| |||||||||||| |||    
T  23968632 gaaatcatattaatcatcaaa-tacaacattataaacctaagtcttacatattttcttcaaaaatgc-cattaaccctaattt-cccaattttaccataa 23968536  T
Q  128 gaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
     ||||||| ||||| ||||||||||||||| ||||||||| | || |||| |||||||||||||||||||| |||||||||||||||  |||||||||||    
T  23968535 -aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgcaaagacaa-aagcacagcaaa 23968438  T
Q  228 tcagttcctaagttcttctctcttggtcttctc 260  Q
     || |||||| ||||||||||||||||||||||    
T  23968437 acaattcctaggttcttctctcttggtcttctc 23968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 270
Target Start/End: Original strand, 31252300 - 31252549
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||  | ||||||| |||||||    |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  31252300 gattaagaaatcatacatagcatcaaattacaacacgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 31252396  T
Q  121 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 216  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||        
T  31252397 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgcaaagacaaagaa 31252496  T
Q  217 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctt 270  Q
    | |||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  31252497 aacacagc-aatcggttcctaagttcttctctcttggtcttctctccttgcctt 31252549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 11288721 - 11288596
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 246  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||  | |||||| |||||||||||||| ||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgccaagacaa-aaacacagc-aatcagttcctaagctcttct 11288624  T
Q  247 ctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||| ||||||||| ||||    
T  11288623 ctcttggtcttctc-ccttgccttagctt 11288596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 15458492 - 15458559
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15458559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 15465087 - 15465154
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 15465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 275
Target Start/End: Complemental strand, 34640041 - 34639910
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 242  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34640041 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34639943  T
Q  243 ttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||| ||||    
T  34639942 ttctctcttggtcttctctccttgccttagctt 34639910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 275
Target Start/End: Complemental strand, 34646715 - 34646584
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 242  Q
    ||||||||||||||||| |||| || |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  34646715 aattttcagaaattatagattaagattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 34646617  T
Q  243 ttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||| ||||    
T  34646616 ttctctcttggtcttctctccttgccttagctt 34646584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 275
Target Start/End: Complemental strand, 28288537 - 28288437
Alignment:
Q  172 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgccttt 271  Q
    ||||| ||||| || ||||||||||||||||||||||||||||  | |||||| |||||||||||||| | |||||||||||||||||| |||||||||     
T  28288537 attgagagatagtctcacccttaccttagaattgcaaagacaa-aaacacagc-aatcagttcctaagcttttctctcttggtcttctc-ccttgcctta 28288441  T
Q  272 gctt 275  Q
    ||||    
T  28288440 gctt 28288437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 10986235 - 10986173
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    |||||| |||||||||| ||||||| |||||||||||| || |||||||||||||||||||||    
T  10986235 aatttttagaaattatagattatgattattgaaagatagtctcacccttaccttagaattgca 10986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 275
Target Start/End: Original strand, 24563475 - 24563569
Alignment:
Q  182 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  ||||||||||||||||||||||||||||||||| ||||    
T  24563475 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgccttagctt 24563569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 29614201 - 29614146
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  29614201 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 29614146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 4477858 - 4477912
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  4477858 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 23839199 - 23839253
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  23839199 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 24512898 - 24512836
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||| |||||||| |||||    
T  24512898 aattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgca 24512836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 24641644 - 24641607
Alignment:
Q  238 agttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  24641644 agttcttctctcttggtcttctctccttgccttagctt 24641607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 12168366 - 12168418
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12168366 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 12168418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19287275 - 19287327
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19287275 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19287327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 19785921 - 19785869
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19785921 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19785869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19878459 - 19878511
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19878459 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 19878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 930150 - 930095
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  930150 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 930095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 18800438 - 18800493
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||| ||||    
T  18800438 aattttcagaaattatagattatgattattgagagatagtctcacccttacattag 18800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||||||||| ||||| || |||||| ||||| || |||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 19884235 - 19884287
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || |||||| |||||||    
T  19884235 tttcagaaattatagattatgattattgagagatagtctcaccctaaccttag 19884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 275
Target Start/End: Original strand, 135304 - 135568
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| |||||| ||||||||||||||||||| ||||||| |||||||  | |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  135304 atcaacaacatagattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaacccttaat 135402  T
Q  110 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  135403 t-ctcaattttacctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgcaa 135501  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  135502 agacaaatagcacagcaaatcagttcctaagctcttctctcttggtcttctctccttgccttagctt 135568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 249
Target Start/End: Complemental strand, 25181121 - 25180880
Alignment:
Q  8 acatcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaaccctta 107  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||| | || |||||||||   |||||||||||||||||||||||| |||||||| |    
T  25181121 acatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacctgatcaatataccttttctttcaaaatcatccttaaccctaa 25181022  T
Q  108 ttttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25181021 atttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 25180922  T
Q  208 aagacaattagcacagcaaatcagttcctaagttcttctctc 249  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  25180921 aagacaaaaagcacagcaaatcagttcctaagttcttctctc 25180880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 9 - 247
Target Start/End: Original strand, 10441 - 10679
Alignment:
Q  9 catcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttat 108  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||||||||||||||||||| |||||||| |     
T  10441 catcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaaccttatccctataccttttctttcaaaatcatccttaaccctaaa 10540  T
Q  109 tttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaa 208  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10541 tttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatttcaa 10640  T
Q  209 agacaattagcacagcaaatcagttcctaagttcttctc 247  Q
    ||||||  |||||||||||||||||||||||| ||||||    
T  10641 agacaaaaagcacagcaaatcagttcctaagtccttctc 10679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 27207778 - 27207644
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 240  Q
    ||||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  27207778 gattaattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgcaaagacaaaaagcacagcaaatccgttcctaagt 27207679  T
Q  241 tcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||||| ||||    
T  27207678 tcttctctcttggtcttctctccttgccttagctt 27207644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 141 - 275
Target Start/End: Original strand, 26885179 - 26885312
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 240  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||||    
T  26885179 gattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcagagacaaaaagcacatcaaatccgttcctaagt 26885277  T
Q  241 tcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||| ||||||||||||||| ||||    
T  26885278 tcttctctcttggttttctctccttgccttagctt 26885312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 23168480 - 23168224
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23168480 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23168383  T
Q  121 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 215  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23168382 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23168284  T
Q  216 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
     ||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||||    
T  23168283 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgccttagctt 23168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 23579737 - 23579481
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||| ||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23579737 gattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctc--aatttt 23579640  T
Q  121 ---accttaagaacagttcaatt-gattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaat 215  Q
       | ||| | |||  ||| ||| |||||||||| ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| | ||||     
T  23579639 tttatcttcaaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaacaa- 23579541  T
Q  216 tagcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
     ||||||||||| | || ||||||||||||||||||||||||||||||||||||| ||||    
T  23579540 aagcacagcaaaaccgtccctaagttcttctctcttggtcttctctccttgccttagctt 23579481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 23265058 - 23265197
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 158  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23265058 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23265156  T
Q  159 atatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23265157 atatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 23280126 - 23280265
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaatt 158  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| ||| ||  | |||||  || ||||||| ||||||| ||| ||||||||||||||    
T  23280126 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaattctca-atttttattttcaagaacaattcaattagatcaattttcagaaatt 23280224  T
Q  159 atatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||| ||||| |||||| ||||| || |||||||||||||    
T  23280225 atatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 27366566 - 27366472
Alignment:
Q  182 aatcccacccttaccttagaattgcaaagacaattag--cacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    |||| ||||||||||||||||||||||||||||  |   |||||||| ||  ||||  ||||||||||||||||||||||||||||||||| ||||    
T  27366566 aatctcacccttaccttagaattgcaaagacaaagaaaacacagcaa-tcgattccctagttcttctctcttggtcttctctccttgccttagctt 27366472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 5706075 - 5705947
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 245  Q
    |||||| ||||||| ||||||| || ||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  5706075 tttcaggaattatagattatgattaatgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 5705977  T
Q  246 tctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||||||||||| ||||| ||||    
T  5705976 tctcttggtcttctctcctagccttagctt 5705947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 6483718 - 6483772
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6483718 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 6487185 - 6487239
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||    
T  6487185 aattttcagaaattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 21908360 - 21908414
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||||||||||||||| |||| |||||| ||||| || |||||||||||||    
T  21908360 aattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 26583830 - 26583882
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  26583830 tttcagaaattatagattatgattattgagagatagtctcacccttaccttag 26583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 238
Target Start/End: Complemental strand, 16147020 - 16146791
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| ||||||||||||||||||||||||||||||  || |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16147020 atcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttatt 16146921  T
Q  110 ttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16146920 ttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccacccttaccttagaattgcaaa 16146821  T
Q  210 gacaattagcacagc-aaatcagttcctaa 238  Q
    ||||| ||||||||| ||||||||||||||    
T  16146820 gacaaatagcacagcaaaatcagttcctaa 16146791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 27906142 - 27906328
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  27906142 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaattctc--aatttt 27906239  T
Q  121 acctt-aagaacagttcaattg-attaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    | ||| ||||||  ||| |||  |||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||||||||    
T  27906240 atcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgca 27906328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 197
Target Start/End: Original strand, 14486601 - 14486713
Alignment:
Q  86 tcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataa 183  Q
    ||||||||||||| |||||| || |||||||||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||  |||||| ||||     
T  14486601 tcaaaatcatcatcaaccct-atattcccaattttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatag 14486699  T
Q  184 tcccacccttacct 197  Q
    || |||||||||||    
T  14486700 tctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 53483708 - 53483836
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 245  Q
    |||||| ||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   ||||||||    
T  53483708 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 53483806  T
Q  246 tctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||||||||||| ||||| ||||    
T  53483807 tctcttggtcttctctcctagccttagctt 53483836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 15408140 - 15408196
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 201  Q
    ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  15408140 aattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 15408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 11848114 - 11848169
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11848114 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 11848169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 8045884 - 8045832
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  8045884 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 8045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 61 - 275
Target Start/End: Complemental strand, 2051 - 1837
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt-aagaacagttcaattgattaattttcagaaatta 159  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  2051 aaacctaattcttacaccttttctttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaatta 1953  T
Q  160 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 259  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  1952 tatattatgactattgaaagataatcccacccttaccttacaattgcaaagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 1853  T
Q  260 ctccttgcctttgctt 275  Q
    ||||||||||| ||||    
T  1852 ctccttgccttagctt 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 10 - 205
Target Start/End: Original strand, 9201 - 9396
Alignment:
Q  10 atcatcaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttatt 109  Q
    |||| |||||| |||| |||||||||||||| ||||||| |||||||  | |||||| ||||||| |||||||||||||||||||||||||||||||| |    
T  9201 atcaacaacatagattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaacccttaat 9300  T
Q  110 ttcccaattttacctt-aagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 205  Q
    | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9301 t-cccaattttacttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 275
Target Start/End: Original strand, 889 - 1126
Alignment:
Q  35 tactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaagaacagt 134  Q
    ||||||||||||||  ||||| ||| |||||| | ||||| || ||||||| |||||||  |||||||||| ||||||||||||||||| ||||||||||    
T  889 tactaatcatcaaac-acaactttataaacctaaatcttacacattttctt-caaaatcgccattaaccctaattttcccaattttaccataagaacagt 986  T
Q  135 tcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttc 234  Q
    | ||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  987 taaattgcttaattttcagaaatcatatattatcactattgagagatgatcccacccttaccttagaattgcaaagacaa-aagcacagcaaatcaattc 1085  T
Q  235 ctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||| |||||||||||||||||||||||||||||||| ||||    
T  1086 ctaggttcttctctcttggtcttctctccttgccttagctt 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 61 - 270
Target Start/End: Original strand, 10156 - 10364
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttac-cttaagaacagttcaattgattaattttcagaaatta 159  Q
    |||| ||||||||| ||| |  |||||||||| | ||| |||||| |||  ||||||||||  || | ||||| ||||||||||||||||||||||||||    
T  10156 aaacatgattcttacaccatccctttcaaaattagcatcaaccctaatt--cccaattttattctcatgaacaattcaattgattaattttcagaaatta 10253  T
Q  160 tatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttct 259  Q
     ||||||||| ||||| ||||||||| ||||||||||||||||||| | ||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  10254 catattatgattattggaagataatctcacccttaccttagaattgtagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttct 10353  T
Q  260 ctccttgcctt 270  Q
    |||||||||||    
T  10354 ctccttgcctt 10364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 66 - 275
Target Start/End: Complemental strand, 493162 - 492953
Alignment:
Q  66 tgattcttataccttttctttcaaaatcatcatta-acccttattttcccaattttacctt-aagaacagttcaatt-gattaattttcagaaattatat 162  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| ||| ||   |||||| ||  ||||||  ||| ||| |||||||||||||||||||||     
T  493162 tgattcttacaccttttctttcaaaatcagcattataccctaattctct--attttatctccaagaactattccattagattaattttcagaaattatac 493065  T
Q  163 attatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttctctcttggtcttctctc 262  Q
    |||| || ||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  493064 atta-gattattgaaagataatctcacccttaccttagaattgcagagacaaaaagcacagcaaatccgttcctaagttcttctctcttggtcttctctc 492966  T
Q  263 cttgcctttgctt 275  Q
    |||||||| ||||    
T  492965 cttgccttagctt 492953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 1234 - 1424
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    ||||| ||||||||||||||||||||  || ||||||  |||||||| |||||  | ||||||| ||||||||||||||  ||| |||||||||||||||    
T  1234 gattaggaaatcatactaatcatcaat-tataacattgtaaacctgaatcttacgcattttctt-caaaatcatcattagacctaattttcccaatttta 1331  T
Q  122 ccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    |||||||||||||| ||||| ||||||||||||||  ||||||||  |||||||||||  |||||||||||||||||||||||||||||||||    
T  1332 ccttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgcaaagacaa 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 16233 - 16023
Alignment:
Q  29 aaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttaccttaag 128  Q
    |||||||||||||||||||| |||||||| |  ||||||||||||  || ||||||| ||||||||||||||||||| | || || | ||||| |||||     
T  16233 aaatcatactaatcatcaaa-tacaacatcatgaacctgattcttgcacattttctt-caaaatcatcattaaccctaaatt-ccaatttttatcttaaa 16137  T
Q  129 aacagttcaattgattaatttt-cagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaa 227  Q
    ||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |   | ||||| |||||||||    
T  16136 aacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaa 16037  T
Q  228 tcagttcctaagtt 241  Q
    |||| |||||||||    
T  16036 tcagctcctaagtt 16023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 10250 - 10125
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  10250 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 10151  T
Q  245 ctctcttggtcttctctccttgcctt 270  Q
    ||||||||||||||||||||||||||    
T  10150 ctctcttggtcttctctccttgcctt 10125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 11111 - 11042
Alignment:
Q  172 attgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 241  Q
    |||||| ||||||||||||||||||||||||||  |   | ||||| ||||||||||||| |||||||||    
T  11111 attgaaggataatcccacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaagtt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 1580 - 1455
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttctt 244  Q
    ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||    
T  1580 aattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattgtatagacaaaaagcacagcaaatccgttcctaagttctt 1481  T
Q  245 ctctcttggtcttctctccttgcctt 270  Q
    ||||||||||||||||||||||||||    
T  1480 ctctcttggtcttctctccttgcctt 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 91374 - 91144
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 124  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  91374 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 91278  T
Q  125 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 224  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  91277 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 91180  T
Q  225 aaatcagttcctaagttcttctctcttggtcttctc 260  Q
    ||| || || ||||| ||||||||||||||||||||    
T  91179 aaaccaatttctaagctcttctctcttggtcttctc 91144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 97100 - 96870
Alignment:
Q  28 gaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttt---acct 124  Q
    ||||||||| ||||||||||| |||||||||| |||||| | ||||| || ||||||| ||||||   |||||||||| |||| |||||||||   |||     
T  97100 gaaatcatattaatcatcaaa-tacaacattataaacctaaatcttacacattttctt-caaaattgccattaaccctaattt-cccaatttttttacca 97004  T
Q  125 taagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc 224  Q
    ||| ||||||| ||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||  ||  ||||    
T  97003 taaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgcaaagataa--agtgcagc 96906  T
Q  225 aaatcagttcctaagttcttctctcttggtcttctc 260  Q
    ||| || || ||||| ||||||||||||||||||||    
T  96905 aaaccaatttctaagctcttctctcttggtcttctc 96870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 111885 - 111938
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  111885 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 6035 - 5781
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||  | ||||||| ||||||||   |||| | ||||||| |||||| |||||||||||| | | | ||||| ||| ||  ||||||    
T  6035 gattaagaaatcatacataacatcaaattacaacatgttaaacataattcttacaccttt-ctttcaaaatcagcctcataccctaattctc--aatttt 5939  T
Q  121 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--tt 216  Q
    | ||| ||||||  ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||        
T  5938 atcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaaagaa 5839  T
Q  217 agcacagcaaatcagttcctaagttcttctctcttggtcttctctccttgcctttgctt 275  Q
    | |||||| |||| |||||  ||||||||||||||||||||||||||||||||| ||||    
T  5838 aacacagc-aatcggttccctagttcttctctcttggtcttctctccttgccttagctt 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 141 - 275
Target Start/End: Complemental strand, 3461 - 3327
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagt 240  Q
    ||||||||||||||||||||||||||     |||||||||||||  ||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  3461 gattaattttcagaaattatatattaaattcattgaaagataatatcacccttaccttagaattgcaaagacaaaaagcacggcaaatccgttcctaagt 3362  T
Q  241 tcttctctcttggtcttctctccttgcctttgctt 275  Q
    ||| |||||||||||||||||| ||||||| ||||    
T  3361 tctcctctcttggtcttctctcgttgccttagctt 3327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 6 - 125
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagttcttct 246  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||| |||||||| ||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgcaaagataa--agtgcagcaagtcaattcctaagctcttct 103  T
Q  247 ctcttggtcttctctccttgcct 269  Q
    |||||||||||||| ||||||||    
T  104 ctcttggtcttctc-ccttgcct 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 23748 - 23562
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||| | ||||||| |||||||    |||| ||||||||| | ||||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  23748 gattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaattctc--aatttt 23651  T
Q  121 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
      ||| ||||||  |||  || ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||||||||||||||    
T  23650 gtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgca 23562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 13947 - 13880
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa 214  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgcaaagacaa 13880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 275
Target Start/End: Original strand, 111686 - 111817
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttc 242  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||||||||| |||||||    | |||||| ||||  |||   |||||    
T  111686 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgcgaagacaaagaaaacacagc-aatcgattctctagttc 111784  T
Q  243 ttctctcttggtcttctctccttgcctttgctt 275  Q
    |||||||||||||||||||||||||||| ||||    
T  111785 ttctctcttggtcttctctccttgccttagctt 111817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 11905 - 11850
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11905 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 207
Target Start/End: Original strand, 73161 - 73347
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcatta-acccttattttcccaatttt 120  Q
    ||||||||||||||||  | ||||||| |||||||    |||| ||||||||| ||| ||||||||||||||| ||| | ||||| ||| ||  ||||||    
T  73161 gattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaattctc--aatttt 73258  T
Q  121 acctt-aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
    | ||| |||| |  | | ||| |||||||||||| |||||||| |||||||  |||||||||||||||||||||||||| | |||||||    
T  73259 atcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacctcataattgca 73347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 40711 - 40524
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  40711 gattaagaaatcattctgaacatcaaattacaacacgttaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 40612  T
Q  122 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgca 207  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || ||||||||||||||| |||||    
T  40611 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgca 40524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 10609 - 10546
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaatt 204  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||| ||||||||||||||    
T  10609 gattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttagaatt 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 16736 - 16875
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  16736 aaacatgattcttaaaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 16833  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||| ||||| |||||| ||||| || |||||||||||||    
T  16834 tatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 135349 - 135530
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaatttta 121  Q
    |||||||||||||| || | ||||||| |||||||    |||| |||| |||| ||| || |||||||||||| ||| |||||| |||| || | |||||    
T  135349 gattaagaaatcattctgaacatcaaattacaacacattaaacatgatccttacaccattcctttcaaaatcagcatcaaccctaatttcccaattttta 135448  T
Q  122 ccttaagaacagttcaattgatta--attttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 201  Q
     || ||||||| ||||  | |  |  |||||||||||||||||| ||||| |||||| ||||| || |||||||||||||||    
T  135449 tctcaagaacaattcatgttaaaacaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaga 135530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 717 - 770
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttag 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 198
Target Start/End: Original strand, 12833 - 13019
Alignment:
Q  22 gattaagaaatcatactaatcatcaaagtacaacattaaaaacct-gattcttataccttttctttcaaaatcat-cattaacccttattttccc--aat 117  Q
    ||||| |||||||||||||||||  || |||||||||| |||||| ||||||||   | |||| |||| |||||| |||||||||| | ||||||  | |    
T  12833 gattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaatt 12932  T
Q  118 tttacc-ttaagaacagttcaa---ttgattaa-ttttcagaaattatatattatgactattg-aaagataatcccacccttacctt 198  Q
    |||||| |||||||||||| ||   | |||||| |||| |||||| ||||||||  ||||||| |||||||||||||||||||||||    
T  12933 tttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 13548 - 13687
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| || |||||||||||| ||| |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  13548 aaacatgattcttacaccattcctttcaaaatcagcatcaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 13645  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  13646 tatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 275
Target Start/End: Complemental strand, 45326 - 45198
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaa--ttagcacagcaaatcagttcctaagttcttc 245  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    | |||||| ||||  |||   ||||||||    
T  45326 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagatttgcgaagacaaagaaaacacagc-aatcgattctctagttcttc 45228  T
Q  246 tctcttggtcttctctccttgcctttgctt 275  Q
    ||||||||||||||||||| ||||| ||||    
T  45227 tctcttggtcttctctcctagccttagctt 45198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 116877 - 116951
Alignment:
Q  126 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||| ||||||| ||| ||||||||||||||||||| ||||| |||||| ||||| || |||||||||||||    
T  116877 aagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 22646 - 22536
Alignment:
Q  146 attttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagc-aaatcagttcctaagttctt 244  Q
    |||||||||||||||||| ||||| |||||| ||||| || |||||||||||| || ||||  ||| |  | ||||||| ||||| ||||||| | ||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgc--agaaatattgcacagcaaaatcggttcctaggctctt 22549  T
Q  245 ctctcttggtctt 257  Q
    |||||||||||||    
T  22548 ctctcttggtctt 22536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 805 - 750
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  805 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 147 - 8
Alignment:
Q  61 aaacctgattcttataccttttctttcaaaatcatcattaacccttattttcccaattttacctt--aagaacagttcaatt-gattaattttcagaaat 157  Q
    |||| ||||||||| ||| || |||||||||||| ||  |||||| |||  |||||||||   ||  ||||||| ||||||| ||| |||||||||||||    
T  147 aaacatgattcttacaccattcctttcaaaatcagcaacaaccctaatt--cccaatttttattttcaagaacaattcaattagatcaattttcagaaat 50  T
Q  158 tatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||| ||||| || |||||| ||||| || |||||||||||||    
T  49 tatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 11342 - 11397
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  11342 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 30858 - 30913
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  30858 aattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 30913  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 102002 - 101928
Alignment:
Q  126 aagaacagttcaatt-gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||| ||||||| ||| ||||||||| ||||||||| ||||| |||||| ||||| || |||||||||||||    
T  102002 aagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0796 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 1784 - 1691
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 241  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  1784 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 1691  T

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Target: scaffold0796; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Complemental strand, 5807 - 5714
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaagacaattagcacagcaaatcagttcctaagtt 241  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  ||| |   | ||||| ||||||||||||| |||||||||    
T  5807 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtt 5714  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 17644 - 17700
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttaga 201  Q
    ||||||||||||||||| ||||||  |||||| ||||| || |||||||||||||||    
T  17644 aattttcagaaattatacattatggttattgagagatagtctcacccttaccttaga 17700  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 14450 - 14398
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacct 197  Q
    ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||    
T  14450 aattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 932 - 987
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  932 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 987  T

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Target: scaffold0456; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 8077 - 8132
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||| |||| ||||||| |||||| ||||| || ||||||||||||||    
T  8077 aattttcagaaactatagattatgattattgagagatagtctcacccttaccttag 8132  T

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Target: scaffold0090 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 18170 - 18225
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  18170 aattttcaaaaattatagattatgattattgagagatagtctcacccttaccttag 18225  T

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Target: scaffold1461 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 1543 - 1485
Alignment:
Q  141 gattaattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||  |||||| ||  |||| ||||||||| |||||||||||||    
T  1543 gattaattttcagaaattgcatattaagatcattgcaagataatctcacccttacctta 1485  T

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Target: scaffold0317 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 1387 - 1441
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    |||||||| ||||||||||| ||||  ||||||||||| || |||||||||||||    
T  1387 aattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 34330 - 34276
Alignment:
Q  145 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 199  Q
    ||||||||||||||||||| ||||| ||| || ||||| || |||||||||||||    
T  34330 aattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold1773 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 1181 - 1242
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgcaaa 209  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||  |||||||    
T  1181 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaa 1242  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 1950 - 1897
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  1950 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 1897  T

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Target: scaffold0117; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 8627 - 8574
Alignment:
Q  147 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    ||||||||||||||| ||||||| |||||| | ||| || ||||||||||||||    
T  8627 ttttcagaaattatagattatgattattgagatatagtctcacccttaccttag 8574  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 294 - 346
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||||||||||| ||||||  |||||| ||||| || ||||||||||||||    
T  294 tttcagaaattatagattatggttattgagagatagtctcacccttaccttag 346  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 50182 - 50234
Alignment:
Q  148 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 200  Q
    |||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  50182 tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 50234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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