View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7650_high_20 (Length: 220)

Name: NF7650_high_20
Description: NF7650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7650_high_20
NF7650_high_20
[»] chr3 (39 HSPs)
chr3 (22-161)||(2267583-2267722)
chr3 (22-161)||(46405987-46406126)
chr3 (22-161)||(54391424-54391563)
chr3 (22-161)||(2645974-2646113)
chr3 (22-161)||(49139152-49139291)
chr3 (22-161)||(34050709-34050848)
chr3 (22-161)||(4003252-4003391)
chr3 (22-157)||(36136001-36136135)
chr3 (22-161)||(3494122-3494261)
chr3 (22-161)||(55268059-55268198)
chr3 (22-160)||(2429568-2429706)
chr3 (22-159)||(34692282-34692419)
chr3 (25-161)||(43570965-43571101)
chr3 (22-161)||(51694534-51694673)
chr3 (25-161)||(45099452-45099588)
chr3 (22-161)||(49217727-49217867)
chr3 (25-160)||(55205924-55206058)
chr3 (28-161)||(41579008-41579141)
chr3 (28-161)||(46345591-46345724)
chr3 (25-161)||(13894888-13895023)
chr3 (22-160)||(52568419-52568557)
chr3 (22-137)||(43478134-43478249)
chr3 (28-161)||(7247141-7247275)
chr3 (22-138)||(49611260-49611376)
chr3 (22-93)||(3497816-3497887)
chr3 (25-131)||(34646204-34646310)
chr3 (30-161)||(20374965-20375098)
chr3 (25-131)||(44928588-44928694)
chr3 (25-131)||(11377964-11378070)
chr3 (25-131)||(34471044-34471150)
chr3 (25-131)||(49274547-49274653)
chr3 (25-161)||(50458233-50458372)
chr3 (25-75)||(14632651-14632701)
chr3 (28-160)||(27096676-27096812)
chr3 (25-75)||(51012269-51012319)
chr3 (106-157)||(24701356-24701407)
chr3 (25-161)||(27188168-27188307)
chr3 (25-57)||(10052340-10052372)
chr3 (32-161)||(50341432-50341564)
[»] chr7 (27 HSPs)
chr7 (22-161)||(9366217-9366356)
chr7 (22-161)||(17840289-17840428)
chr7 (22-161)||(20565729-20565868)
chr7 (22-161)||(42504355-42504494)
chr7 (22-161)||(34157770-34157906)
chr7 (22-161)||(42683493-42683632)
chr7 (22-157)||(48271745-48271880)
chr7 (22-161)||(34141941-34142080)
chr7 (25-161)||(41623171-41623307)
chr7 (22-161)||(46861175-46861314)
chr7 (28-161)||(36392807-36392940)
chr7 (28-161)||(21186280-21186413)
chr7 (22-153)||(28978213-28978344)
chr7 (22-138)||(48194078-48194194)
chr7 (22-138)||(40589850-40589966)
chr7 (22-138)||(45362273-45362389)
chr7 (25-160)||(10225161-10225296)
chr7 (25-161)||(28113389-28113522)
chr7 (26-161)||(1641666-1641804)
chr7 (25-125)||(20877007-20877107)
chr7 (28-161)||(4230560-4230696)
chr7 (27-131)||(43350377-43350481)
chr7 (25-95)||(22292002-22292072)
chr7 (25-131)||(42736111-42736216)
chr7 (32-75)||(3380049-3380092)
chr7 (25-161)||(15900389-15900522)
chr7 (25-57)||(17184393-17184425)
[»] chr6 (20 HSPs)
chr6 (22-161)||(6206456-6206595)
chr6 (22-161)||(11693423-11693562)
chr6 (22-161)||(27641146-27641285)
chr6 (27-161)||(32691694-32691828)
chr6 (22-161)||(13616879-13617018)
chr6 (25-161)||(13403900-13404036)
chr6 (25-161)||(32026606-32026742)
chr6 (25-161)||(32036665-32036801)
chr6 (25-157)||(34802166-34802298)
chr6 (35-161)||(35020248-35020373)
chr6 (22-138)||(29067587-29067703)
chr6 (22-138)||(29109176-29109292)
chr6 (25-161)||(14123794-14123933)
chr6 (25-131)||(12397916-12398021)
chr6 (31-160)||(20241340-20241472)
chr6 (31-160)||(22135324-22135456)
chr6 (31-160)||(22142677-22142809)
chr6 (32-161)||(30763971-30764103)
chr6 (25-160)||(32133651-32133789)
chr6 (32-75)||(17464487-17464530)
[»] chr5 (25 HSPs)
chr5 (22-161)||(11028417-11028556)
chr5 (22-161)||(6331-6470)
chr5 (22-161)||(8575242-8575381)
chr5 (22-161)||(38855124-38855263)
chr5 (22-161)||(19035776-19035915)
chr5 (22-160)||(8538947-8539085)
chr5 (22-161)||(11347770-11347909)
chr5 (22-161)||(27660478-27660617)
chr5 (25-161)||(34682911-34683047)
chr5 (22-161)||(30710569-30710708)
chr5 (28-161)||(3602431-3602563)
chr5 (28-161)||(18309349-18309482)
chr5 (28-161)||(25499170-25499303)
chr5 (25-161)||(35566360-35566496)
chr5 (28-161)||(1399288-1399421)
chr5 (28-139)||(20199451-20199562)
chr5 (25-160)||(35927064-35927197)
chr5 (25-131)||(7484476-7484582)
chr5 (25-95)||(1972533-1972603)
chr5 (32-161)||(7400798-7400930)
chr5 (25-125)||(1695934-1696034)
chr5 (25-75)||(4723074-4723124)
chr5 (25-75)||(6792430-6792480)
chr5 (25-125)||(36349287-36349386)
chr5 (32-75)||(31239181-31239224)
[»] chr4 (36 HSPs)
chr4 (22-161)||(6176415-6176554)
chr4 (22-161)||(21016277-21016416)
chr4 (22-161)||(49095713-49095852)
chr4 (25-161)||(40352879-40353015)
chr4 (22-161)||(55797711-55797850)
chr4 (22-161)||(41793902-41794041)
chr4 (25-161)||(34152267-34152403)
chr4 (22-161)||(56139983-56140122)
chr4 (25-161)||(51427182-51427319)
chr4 (25-161)||(44559308-44559444)
chr4 (22-161)||(6281503-6281642)
chr4 (22-161)||(37867540-37867679)
chr4 (28-161)||(956438-956571)
chr4 (22-138)||(34528798-34528914)
chr4 (28-161)||(49572190-49572323)
chr4 (22-138)||(1043836-1043952)
chr4 (22-138)||(39589872-39589988)
chr4 (22-161)||(9490555-9490694)
chr4 (25-160)||(49422739-49422870)
chr4 (25-131)||(4784324-4784430)
chr4 (25-131)||(42887399-42887505)
chr4 (28-161)||(21410963-21411099)
chr4 (28-161)||(21412347-21412483)
chr4 (32-161)||(25145619-25145751)
chr4 (25-131)||(36775466-36775572)
chr4 (25-125)||(49816397-49816497)
chr4 (25-75)||(2774195-2774245)
chr4 (25-131)||(21170599-21170705)
chr4 (27-125)||(43888476-43888574)
chr4 (25-75)||(45940717-45940767)
chr4 (25-95)||(49790913-49790983)
chr4 (25-95)||(51026772-51026842)
chr4 (32-131)||(4910624-4910723)
chr4 (28-161)||(24076212-24076348)
chr4 (32-161)||(9718344-9718475)
chr4 (32-75)||(17292843-17292886)
[»] chr2 (25 HSPs)
chr2 (22-161)||(22002797-22002936)
chr2 (22-161)||(43983697-43983836)
chr2 (22-160)||(3936401-3936539)
chr2 (22-161)||(28476477-28476616)
chr2 (22-161)||(17425761-17425900)
chr2 (22-161)||(39798965-39799104)
chr2 (28-161)||(19470607-19470740)
chr2 (23-161)||(35492618-35492755)
chr2 (28-161)||(41498104-41498237)
chr2 (22-161)||(16582895-16583034)
chr2 (25-160)||(23408807-23408942)
chr2 (25-161)||(2918347-2918483)
chr2 (28-161)||(43492545-43492678)
chr2 (28-161)||(40676404-40676537)
chr2 (22-138)||(3942495-3942611)
chr2 (25-161)||(33404838-33404977)
chr2 (25-131)||(6977952-6978058)
chr2 (28-95)||(15890958-15891025)
chr2 (25-131)||(16413257-16413362)
chr2 (25-75)||(17537892-17537942)
chr2 (25-121)||(37311624-37311720)
chr2 (27-152)||(5421234-5421362)
chr2 (25-75)||(34520699-34520749)
chr2 (25-75)||(24107752-24107802)
chr2 (22-59)||(23786767-23786804)
[»] chr8 (18 HSPs)
chr8 (22-161)||(484354-484493)
chr8 (22-161)||(15031421-15031560)
chr8 (22-161)||(45065757-45065896)
chr8 (25-161)||(28167883-28168019)
chr8 (22-161)||(41276155-41276294)
chr8 (26-161)||(41016954-41017089)
chr8 (22-161)||(24862426-24862565)
chr8 (22-161)||(41855978-41856117)
chr8 (22-160)||(42604532-42604670)
chr8 (28-161)||(18439285-18439418)
chr8 (22-160)||(40703442-40703580)
chr8 (27-134)||(22550173-22550280)
chr8 (22-138)||(44051535-44051651)
chr8 (25-95)||(26487612-26487682)
chr8 (28-131)||(42167923-42168026)
chr8 (25-75)||(38032888-38032938)
chr8 (32-125)||(19241648-19241741)
chr8 (32-125)||(19314832-19314925)
[»] chr1 (37 HSPs)
chr1 (22-161)||(13634396-13634535)
chr1 (22-161)||(49428429-49428568)
chr1 (24-160)||(48227602-48227738)
chr1 (22-161)||(35525174-35525312)
chr1 (29-161)||(18974401-18974533)
chr1 (25-160)||(42570771-42570906)
chr1 (22-160)||(49925426-49925564)
chr1 (22-161)||(29437024-29437162)
chr1 (22-161)||(27485700-27485838)
chr1 (25-161)||(26494548-26494684)
chr1 (25-161)||(41803316-41803452)
chr1 (22-138)||(51270916-51271032)
chr1 (22-161)||(13974016-13974155)
chr1 (28-145)||(46142438-46142555)
chr1 (22-138)||(29761157-29761273)
chr1 (25-161)||(49397736-49397872)
chr1 (29-161)||(24363051-24363183)
chr1 (31-161)||(6436803-6436940)
chr1 (25-160)||(36910972-36911106)
chr1 (22-101)||(44336895-44336974)
chr1 (25-81)||(26634188-26634244)
chr1 (36-158)||(13284550-13284675)
chr1 (25-131)||(15355768-15355874)
chr1 (25-131)||(23343637-23343743)
chr1 (25-131)||(35585886-35585992)
chr1 (25-81)||(14172740-14172796)
chr1 (25-131)||(37779266-37779372)
chr1 (25-95)||(38044188-38044258)
chr1 (25-131)||(49260663-49260769)
chr1 (25-75)||(17685313-17685363)
chr1 (25-95)||(39856227-39856297)
chr1 (32-161)||(16531181-16531313)
chr1 (25-67)||(24269351-24269393)
chr1 (32-131)||(14771762-14771861)
chr1 (30-125)||(40532366-40532461)
chr1 (25-75)||(35186177-35186227)
chr1 (36-125)||(12790265-12790354)
[»] scaffold0494 (1 HSPs)
scaffold0494 (22-161)||(5822-5961)
[»] scaffold0176 (1 HSPs)
scaffold0176 (22-161)||(2866-3005)
[»] scaffold0618 (1 HSPs)
scaffold0618 (28-161)||(4545-4678)
[»] scaffold0859 (1 HSPs)
scaffold0859 (25-131)||(1456-1562)
[»] scaffold0589 (1 HSPs)
scaffold0589 (25-131)||(5420-5526)
[»] scaffold0192 (1 HSPs)
scaffold0192 (123-161)||(17037-17075)
[»] scaffold0258 (1 HSPs)
scaffold0258 (34-75)||(9666-9707)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 2267583 - 2267722
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2267583 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 2267682  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2267683 acgaggaagaatgaatgtaatggcttttaatgcctaattg 2267722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 46406126 - 46405987
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  46406126 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 46406027  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46406026 acgaggaagaatgaatgtaatggcttttaatgcctaattg 46405987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 54391563 - 54391424
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  54391563 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 54391464  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  54391463 acgaggaagaatgaatgtaatggcttttaatgcctaattg 54391424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 2645974 - 2646113
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  2645974 cactcaaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 2646073  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2646074 acgaggaagaatgaatgtaatggcttttaatgcctaattg 2646113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 49139152 - 49139291
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  49139152 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 49139251  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  49139252 acgaggaagaatgaatgtaatgacttttaatgcctaattg 49139291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 34050848 - 34050709
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  34050848 cactcgaggttgaggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtaccacagggactgtagcggacaagccgattgatttgtgtg 34050749  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34050748 acgaggaagaatgaatgtaatggcttttaatgcctaattg 34050709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 4003252 - 4003391
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||    
T  4003252 cactcgaggttgaggaggagcggaaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtctg 4003351  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  4003352 acgacgaagaatgaatgtaatggcttttaatgcctaattg 4003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 36136135 - 36136001
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||    
T  36136135 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgaagggac-gtagcgggcaacccgattgatttgtgtg 36136037  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgccta 157  Q
    ||||||||||||||||||||||||||||||||||||    
T  36136036 acgaggaagaatgaatgtaatggcttttaatgccta 36136001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 3494122 - 3494261
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||| ||||    
T  3494122 cactggaggttcaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactatagcggacaagccaattgatttatgtg 3494221  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3494222 acgaggaagaatgaatgtaatggcttttaatgcctaattg 3494261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 55268059 - 55268198
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||| ||| || |||||||| |||||||    
T  55268059 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctgaaccaaaacaaggtgccccagggactctagtgggcaacccgattgacttgtgtg 55268158  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  55268159 acgaggaagaatgaatgtaatggtttttaatgcctaattg 55268198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 2429706 - 2429568
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| || |||||||| ||||||| || |||||||| |||||||    
T  2429706 cactcgaggttgagcaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccccagggactatagcgggcaacccgattgacttgtgtg 2429607  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2429606 acgaggaagaatgaatgtaatggcttttaatgcctaatt 2429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 34692282 - 34692419
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||||||||||| || |||||||| |||||||    
T  34692282 cactcgaggttgaggaggagcgggaggacatgctactttggtcctcaaccaaaacaaggtgccgcggggactgtagcgggaaacccgattgacttgtgtg 34692381  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaat 159  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  34692382 acgaggatgaatgaatgtaatgacttttaatgcctaat 34692419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 43571101 - 43570965
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| || |||||||||||||||| || |||||||| ||||||||||    
T  43571101 tcgaggttgaggaggagcgggaggacatgctattttggtcctcgaccaaatcaaggtgcctcagggactgtagcgggcaacccgattgacttgtgtgacg 43571002  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||| |||||||||||||||||||||    
T  43571001 aggaagaatgaatgtgatggcttttaatgcctaattg 43570965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 51694534 - 51694673
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||  |||||||||||||||||| || || ||||| |||||||    
T  51694534 cactcgaggttgaggaggagcgggaggacatgctattttgttcctaaaccaaaacaaggtgtcgcagggactgtagcgggaaacccaattgacttgtgtg 51694633  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  51694634 acgaggatgaatgaatgtaatggcttttaatgcctaattg 51694673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 45099452 - 45099588
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |  |||||||||||||||| || |||||||| || |||||||    
T  45099452 tcgaggttgaggatgagcgggaggacatgttattttggtcctcaaccaaaacaaggtgcaccagggactgtagcgggcaacccgattgacttttgtgacg 45099551  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  45099552 aggaagaatgaatgtaatggcttttaatgcctaattg 45099588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 49217727 - 49217867
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||| | |||||||    
T  49217727 cactcgaggttgaggaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattaacttgtgtg 49217826  T
Q  122 acgaggaagaatgaatgtaatggc-ttttaatgcctaattg 161  Q
    ||||||| ||||||||||| |||| ||||||||||||||||    
T  49217827 acgaggatgaatgaatgtagtggcattttaatgcctaattg 49217867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 55205924 - 55206058
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| || | |||||| ||||||||||    
T  55205924 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagtgggcaacctgattgacttgtgtgacg 55206023  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||| ||||||||||||| |||||||||||||||    
T  55206024 aggaag-atgaatgtaatggtttttaatgcctaatt 55206058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 41579141 - 41579008
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || ||| |||| ||||||| || | |||||| |||||||||||||    
T  41579141 aggttgaggaggagcgggaagacatgctattttggtcctcaaccaaaacaaggtgccccagtgactatagcgggcaacctgattgacttgtgtgacgagg 41579042  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  41579041 aagaatgaatgtaatggcttttaatgcctaattg 41579008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 46345591 - 46345724
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||  ||||||| |||||||||||||    
T  46345591 aggttgaggagcagcgggaggacatgctatttcggtcctcaacaaaaacaaggtgccccatggactgtagcgggcaactcgattgacttgtgtgacgagg 46345690  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    || |||||||||||||||||||||||||||||||    
T  46345691 aataatgaatgtaatggcttttaatgcctaattg 46345724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 13894888 - 13895023
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||| ||||| ||| || |||||||| |||||||||     
T  13894888 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaacaaaaacaaggtgccccagggattgtag-gggcaacccgattgacttgtgtgaca 13894986  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  13894987 aggaagaatgaatgtaatggcttttaatgcctaattg 13895023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 52568419 - 52568557
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||| ||||||||||| | || |||||||||||||||| || |||||||||||| ||| ||  ||||||| |||||||    
T  52568419 cactcgaggttgaggaggagcgggagcacatgctattttgatcatcaaccaaaacaaggtgccccagggactgtagtgggcaacacgattgacttgtgtg 52568518  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    || ||||||||||||||||||||||||||||||||||||    
T  52568519 acaaggaagaatgaatgtaatggcttttaatgcctaatt 52568557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 43478249 - 43478134
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| || |||||||| |||||||    
T  43478249 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacagggtgccgcagggactgtagcgggaaacccgattgacttgtgtg 43478150  T
Q  122 acgaggaagaatgaat 137  Q
    ||||||| ||||||||    
T  43478149 acgaggatgaatgaat 43478134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 7247275 - 7247141
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggac-tgtagcgggtaagccgattgatttgtgtgacgag 126  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||  | ||||||| || |||||||| ||||||||||||    
T  7247275 aggttgaggaggagcgagaggacatgctattttggtcctcaaccaaaacaaggtgccccagggaaatatagcgggcaacccgattgacttgtgtgacgag 7247176  T
Q  127 gaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||| |||||||||||||||    
T  7247175 gaagaatgaatgtaatggcatttaatgcctaattg 7247141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 49611376 - 49611260
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || | |||||| |||||||    
T  49611376 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacctgattgacttgtgtg 49611277  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||| | |||||||||    
T  49611276 acgagaatgaatgaatg 49611260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 3497816 - 3497887
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggact 93  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3497816 cactggaggttcaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggact 3497887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 34646204 - 34646310
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||  ||||||||||||||| || |||||| |  | |||||||    
T  34646204 tcgaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaagaaggtgccctagggactgtagcgggcaacccgattaacctttgtgacg 34646303  T
Q  125 aggaaga 131  Q
    |||||||    
T  34646304 aggaaga 34646310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 20374965 - 20375098
Alignment:
Q  30 gttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa 129  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||  | || || || ||||||  ||||| || |||||||| || ||||||||||||    
T  20374965 gttgaggaggagcgggaggacatgctattttggtcatcaaccaaaagcaagtgcc-caaggactgccgcgggcaacccgattgacttatgtgacgaggaa 20375063  T
Q  130 ---gaatgaatgtaatggcttttaatgcctaattg 161  Q
       || ||||||||||||||| |||||||||||||    
T  20375064 gatgattgaatgtaatggcttctaatgcctaattg 20375098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 44928694 - 44928588
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  44928694 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggttccccagggactgtcgaggacaacccaattgaattgtgtgatg 44928595  T
Q  125 aggaaga 131  Q
    |||||||    
T  44928594 aggaaga 44928588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 11377964 - 11378070
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||| |    
T  11377964 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggacaacccaattgacttgtgtgatg 11378063  T
Q  125 aggaaga 131  Q
    |||||||    
T  11378064 aggaaga 11378070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 34471044 - 34471150
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||| |    
T  34471044 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggaaaacccaattgacttgtgtgatg 34471143  T
Q  125 aggaaga 131  Q
    |||||||    
T  34471144 aggaaga 34471150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 49274653 - 49274547
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||  | |||||||||| | ||  || || ||||| |||||| |||    
T  49274653 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgtcccagggactgtcgaggacaacccaattgacttgtgttacg 49274554  T
Q  125 aggaaga 131  Q
    |||||||    
T  49274553 aggaaga 49274547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 50458233 - 50458372
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||  |    
T  50458233 tcgaggttgaggaagagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtggtg 50458332  T
Q  125 aggaa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||   ||||||||||||||| || ||||  |||||||    
T  50458333 aggaagatgaatgaatgtaatgggttgtaatatctaattg 50458372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 14632701 - 14632651
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  14632701 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 14632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 160
Target Start/End: Original strand, 27096676 - 27096812
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||  |||| || |||  ||||| | ||  || || ||||| |||||||||||||    
T  27096676 aggttgaggaggagcgggaggacatgctattttggctctcaaccaaaagcaggtgccccagaaactgtcgaggacaacccaattgacttgtgtgacgagg 27096775  T
Q  128 aa---gaa-tgaatgtaatggcttttaatgcctaatt 160  Q
    ||   ||| |||||||||||| || ||||||||||||    
T  27096776 aaaatgaattgaatgtaatggtttctaatgcctaatt 27096812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 51012269 - 51012319
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  51012269 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 51012319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 24701356 - 24701407
Alignment:
Q  106 ccgattgatttgtgtgacgaggaagaatgaatgtaatggcttttaatgccta 157  Q
    |||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  24701356 ccgattgacttgtgtgacgaggatgaatgaatgtaatgacttttaatgccta 24701407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 27188307 - 27188168
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| | |||||||  ||||  |  |  | |||||||||| || || |  |||||||| |||||||| |    
T  27188307 tcgaggttgaggaggagcgggaggacatgctattttgctcctcaattaaaagcaaatgtcccagggactgtcgcaggcatcccgattgacttgtgtgatg 27188208  T
Q  125 aggaaga---atgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||    |||||||| |||||| |||| ||||||||    
T  27188207 aggaagatgcttgaatgtagtggcttgtaatacctaattg 27188168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 10052340 - 10052372
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctat 57  Q
    |||||||||||||||||||||||||||||||||    
T  10052340 tcgaggttgaggaggagcgggaggacatgctat 10052372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 50341432 - 50341564
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa-- 129  Q
    ||||||||||||| |||||||| ||||||  |||| ||||||||  |||| ||  ||||||||| | ||  || || ||||| ||||||||| |||||      
T  50341432 tgaggaggagcggaaggacatgttatttctatcctaaaccaaaagcaggtgccctagggactgtcgaggacaatccaattgacttgtgtgacaaggaaga 50341531  T
Q  130 -gaatgaatgtaatggcttttaatgcctaattg 161  Q
     || |||||| |||||||| ||||| |||||||    
T  50341532 tgattgaatgaaatggcttgtaatgtctaattg 50341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 9366217 - 9366356
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9366217 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 9366316  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9366317 acgaggaagaatgaatgtaatggcttttaatgcctaattg 9366356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 17840428 - 17840289
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  17840428 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtgtg 17840329  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17840328 acgaggaagaatgaatgtaatggcttttaatgcctaattg 17840289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 20565868 - 20565729
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||    
T  20565868 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtgtg 20565769  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20565768 acgaggaagaatgaatgtaatggcttttaatgcctaattg 20565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 42504355 - 42504494
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| |||||||||||||    
T  42504355 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaagaaggtaccgcagggactgtagcggacaagccaattgatttgtgtg 42504454  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  42504455 acgaggaagaatgacagtaatggcttttaatgcctaattg 42504494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 34157906 - 34157770
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||    
T  34157906 cactcgaggttga---ggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccacagggactgtagcgggcaacccgattgatttgtgtg 34157810  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34157809 acgaggaagaatgaatgtaatggcttttaatgcctaattg 34157770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 42683632 - 42683493
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  42683632 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtg 42683533  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  42683532 atgaggaagaatgaatgtaatggcttttaatgcctaattg 42683493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 48271880 - 48271745
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  48271880 cactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtg 48271781  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgccta 157  Q
    ||||||||||||||||||||||||||||||||||||    
T  48271780 acgaggaagaatgaatgtaatggcttttaatgccta 48271745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 34142080 - 34141941
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  34142080 cactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggaaacccgattgacttgtgtg 34141981  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  34141980 acgaggaggaatgaatgtaatgacttttaatgcctaattg 34141941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 41623307 - 41623171
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| || |||||||||||||||| || |||||||| |||||||| |    
T  41623307 tcgaggttgaggaggagcggaaggacatgctattttggtcctcatccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatg 41623208  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  41623207 aggaagaatgaatgtaatggcttttaatgcctaattg 41623171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 46861175 - 46861314
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||| ||    
T  46861175 cactcgagattgaggaggagtgggaggaaatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtatg 46861274  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46861275 acgaggaagaatgaatgtaatggcttttaatgcctaattg 46861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 36392807 - 36392940
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||||||||    
T  36392807 aggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgcctcagggactgtagcgggcaacccgattgacttgtgtgacgagg 36392906  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||| ||||||||  |||||||||||||||||    
T  36392907 aagaattaatgtaatttcttttaatgcctaattg 36392940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 21186280 - 21186413
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||  ||||||||||||||| ||  ||||||| |||||||||||||    
T  21186280 aggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgccctagggactgtagcgggcaactcgattgacttgtgtgacgagg 21186379  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| | |||||||||||||||    
T  21186380 aagaatgaatgtaatgacatttaatgcctaattg 21186413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 28978213 - 28978344
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||  || |||||||||||||||| || |||||||| |||||||    
T  28978213 cactcgaggttgaggaggagcgggaggacatgttattttggtcctcaacaaaaacaaggcgccacagggactgtagcgggcaacccgattgacttgtgtg 28978312  T
Q  122 acgaggaagaatgaatgtaatggcttttaatg 153  Q
    |||||||||||||||||||| | |||||||||    
T  28978313 acgaggaagaatgaatgtaaagacttttaatg 28978344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 48194194 - 48194078
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| || | |||||| |||||||    
T  48194194 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactatagcgggaaacctgattgacttgtgtg 48194095  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  48194094 acgaggatgaatgaatg 48194078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 40589966 - 40589850
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||| ||||| || || |||||||| |||||||    
T  40589966 cactcgaggttgaggaggagcgggaggacatgctattttggtcatcaaccaaaacaaggtgccgcagggaccgtagcaggaaacccgattgacttgtgtg 40589867  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  40589866 acgaggatgaatgaatg 40589850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 45362273 - 45362389
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||| || || |||||||| |||||||    
T  45362273 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgccgcaaggactgtagcaggaaatccgattgacttgtgtg 45362372  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  45362373 acgaggatgaatgaatg 45362389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 10225296 - 10225161
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||| || ||| || ||||||||  || |||||||| ||||||||||    
T  10225296 tcgaggttgaggaggagcggggggaaatgctattttggttctcaaccaaaacaaggtgcctcagagattgtagcggccaacccgattgacttgtgtgacg 10225197  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||| ||||||||||||||| ||||||    
T  10225196 aggaagaatgaatataatggcttttaatgtctaatt 10225161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 28113389 - 28113522
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||| || |||| | |  | |||||||    
T  28113389 tcgaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggcaacccgagtaacctttgtgacg 28113488  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||| |||  |||| |||||| |||||||||||||    
T  28113489 aggaag-atg--tgtagtggcttgtaatgcctaattg 28113522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 1641666 - 1641804
Alignment:
Q  26 cgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || |||| ||||  | ||  || ||  |||| |||||||||||    
T  1641666 cgaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaagaaggtgccccaggaactggcgaggacaatccagttgacttgtgtgacga 1641765  T
Q  126 ggaa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||   || |||||||||||| || |||||||||||||    
T  1641766 ggaagatgattgaatgtaatggattgtaatgcctaattg 1641804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20877007 - 20877107
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||| || |||||||||| | ||  || |||||||| ||||||||||    
T  20877007 tcgaggtttaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccccagggactgtcgaggacaacccgattgaattgtgtgacg 20877106  T
Q  125 a 125  Q
    |    
T  20877107 a 20877107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 4230696 - 4230560
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||  |||| || |||||||||| | ||  || || ||||| |||||||||||||    
T  4230696 aggtggaggaggagcgggaggacatgctattttgatcctcaaccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgacgagg 4230597  T
Q  128 aa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||   || ||| ||||||||||| ||||| |||||||    
T  4230596 aagatgattgattgtaatggcttgtaatgtctaattg 4230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 43350377 - 43350481
Alignment:
Q  27 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgag 126  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |||    
T  43350377 gaggttgaggaggagcgggaggacatgctattttggtcttcaaccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatgag 43350476  T
Q  127 gaaga 131  Q
    |||||    
T  43350477 gaaga 43350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 22292072 - 22292002
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    ||||||||||||||||||||||||||||||||||| |||||| | ||||||  |||| || ||||||||||    
T  22292072 tcgaggttgaggaggagcgggaggacatgctattttggtcctgagccaaaagcaggtgccccagggactgt 22292002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 42736216 - 42736111
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  42736216 tcgaggttgaggaggagcgggagaacatgctattttggtcctcagccaaaagcaggtgcc-cagggactgtcgaggacaacccaattgacttgtgtgatg 42736118  T
Q  125 aggaaga 131  Q
    |||||||    
T  42736117 aggaaga 42736111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 3380049 - 3380092
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  3380049 tgaggaggagcgggaggacatgctattttggtcctcaaccaaaa 3380092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 15900389 - 15900522
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||| |||||||||| ||||||| ||||||||| ||||||||  |||||  |||| || |||||||||| | ||  || |||||| |  |||||||||    
T  15900389 tcgaggctgaggaggagtgggaggatatgctattttggtcctcagtcaaaagcaggtgccccagggactgtcgaggacaacccgattaacctgtgtgacg 15900488  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||    ||||| |||||| |||||||||||||    
T  15900489 aggaagat---atgtagtggcttgtaatgcctaattg 15900522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 17184425 - 17184393
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctat 57  Q
    |||||||||||||||||||||||||||||||||    
T  17184425 tcgaggttgaggaggagcgggaggacatgctat 17184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 6206595 - 6206456
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  6206595 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 6206496  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6206495 acgaggaagaatgaatgtaatggcttttaatgcctaattg 6206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 11693562 - 11693423
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11693562 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 11693463  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11693462 acgaggaagaatgaatgtaatggcttttaatgcctaattg 11693423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 27641285 - 27641146
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  27641285 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaattgatttgtgtg 27641186  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27641185 acgaggaagaatgaatgtaatggcttttaatgcctaattg 27641146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 32691694 - 32691828
Alignment:
Q  27 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgag 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32691694 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtgacgag 32691793  T
Q  127 gaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||    
T  32691794 gaagaatgaatgtaatggcttttaatgcctaattg 32691828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 13616879 - 13617018
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| | || |||||||| |||||||    
T  13616879 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgagcaacccgattgacttgtgtg 13616978  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    || |||||||||||||||||||||||| ||||||||||||    
T  13616979 acaaggaagaatgaatgtaatggctttcaatgcctaattg 13617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 13404036 - 13403900
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||||||||||| || ||||| || |||||||| |    
T  13404036 tcgaggttgaggaggagcgagaggacatgctatttcggtcctcaaccaaaaaaaggtgccccagggactgtagcgggcaacccgatagacttgtgtgaag 13403937  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  13403936 aggaagaatgaatgtaatggcttttaatgcctaattg 13403900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 32026606 - 32026742
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||| |    
T  32026606 tcgaggttgaggaggagcgggtggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatg 32026705  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32026706 aggaagaatgaatgtaatgacttttaatgcctaattg 32026742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 32036665 - 32036801
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||| |    
T  32036665 tcgaggttgaggaggagcgggtggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgatg 32036764  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32036765 aggaagaatgaatgtaatgacttttaatgcctaattg 32036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 34802166 - 34802298
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||||||||| || || ||| |||| ||||||||||    
T  34802166 tcgaggttgaggaggagcgggaggacatgctatttttgtcctcaaccaaaacaaggtgccccagggactgtagcaggcaacccggttgacttgtgtgacg 34802265  T
Q  125 aggaagaatgaatgtaatggcttttaatgccta 157  Q
    ||||||||||||||||||| |||||||||||||    
T  34802266 aggaagaatgaatgtaatgacttttaatgccta 34802298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 35020248 - 35020373
Alignment:
Q  35 ggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaagaatg 134  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||| ||  || |||||||| ||||||||||||||||||||    
T  35020248 ggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtgccctagggactgtagtggc-aacccgattgacttgtgtgacgaggaagaatg 35020346  T
Q  135 aatgtaatggcttttaatgcctaattg 161  Q
    |||||||||| ||||||||||||||||    
T  35020347 aatgtaatggtttttaatgcctaattg 35020373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 29067703 - 29067587
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||  || |||||||| |||||||    
T  29067703 cactcgaggttgaggatgagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcaggggctgtagcggaaaacccgattgacttgtgtg 29067604  T
Q  122 acgaggaagaatgaatg 138  Q
    || |||| |||||||||    
T  29067603 acaaggatgaatgaatg 29067587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 29109292 - 29109176
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||  || |||||||| |||||||    
T  29109292 cactcgaggttgaggatgagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcaggggctgtagcggaaaacccgattgacttgtgtg 29109193  T
Q  122 acgaggaagaatgaatg 138  Q
    || |||| |||||||||    
T  29109192 acaaggatgaatgaatg 29109176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 14123933 - 14123794
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||| |||||||| |||||||||||||| || |||||| || |||||  |||| ||||||||||||||||||| || |||||||| ||||||||||    
T  14123933 tcgaggttaaggaggagtgggaggacatgctactttggtccttaatcaaaagtaggtgccgcagggactgtagcgggcaacccgattgacttgtgtgacg 14123834  T
Q  125 aggaa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    | |||   |||||||||||||| ||| |||||||||||||    
T  14123833 atgaagatgaatgaatgtaatgacttgtaatgcctaattg 14123794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 12398021 - 12397916
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  12398021 tcgaggttgaggaggagcgggaggacatgatattttggtcctcagccaaaagcaggtgcc-cagggactgtcgaggacaacccaattgacttgtgtgatg 12397923  T
Q  125 aggaaga 131  Q
    |||||||    
T  12397922 aggaaga 12397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 20241340 - 20241472
Alignment:
Q  31 ttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa- 129  Q
    |||||||||||| |||||  ||||||||| |||||||||||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||||||||||     
T  20241340 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 20241439  T
Q  130 --gaatgaatgtaatggcttttaatgcctaatt 160  Q
      || ||||||||||||||| ||||| ||||||    
T  20241440 atgattgaatgtaatggcttgtaatgtctaatt 20241472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 22135324 - 22135456
Alignment:
Q  31 ttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa- 129  Q
    |||||||||||| |||||  ||||||||| |||||||||||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||||||||||     
T  22135324 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 22135423  T
Q  130 --gaatgaatgtaatggcttttaatgcctaatt 160  Q
      || ||||||||||||||| ||||| ||||||    
T  22135424 atgattgaatgtaatggcttgtaatgtctaatt 22135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 160
Target Start/End: Original strand, 22142677 - 22142809
Alignment:
Q  31 ttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa- 129  Q
    |||||||||||| |||||  ||||||||| |||||||||||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||||||||||     
T  22142677 ttgaggaggagcaggaggttatgctattttggtcctcaaccaaaagcaggttcccaagggactgttgaggacaacccaattgacttgtgtgacgaggaag 22142776  T
Q  130 --gaatgaatgtaatggcttttaatgcctaatt 160  Q
      || ||||||||||||||| ||||| ||||||    
T  22142777 atgattgaatgtaatggcttgtaatgtctaatt 22142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 30763971 - 30764103
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa-- 129  Q
    ||||||||||||| | |||||| |||||||||||||||||||||    || || || ||||||| | ||  || || ||||| |||||||||||||||      
T  30763971 tgaggaggagcggaatgacatgttatttcggtcctcaaccaaaagcgagtgccccatggactgtcgaggacaacccaattgacttgtgtgacgaggaaaa 30764070  T
Q  130 -gaatgaatgtaatggcttttaatgcctaattg 161  Q
     || ||||||||||||||| ||||| |||||||    
T  30764071 tgattgaatgtaatggcttgtaatgtctaattg 30764103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 32133651 - 32133789
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||| ||| |||||| | ||||||||||||||| |||||||| ||||||  |||| || |||||||||| |  |  || | ||||||  |||||||||    
T  32133651 tcgaggctgaagaggagtgagaggacatgctattttggtcctcagccaaaagcaggttccccagggactgtcgatgacaacctgattgacctgtgtgacg 32133750  T
Q  125 aggaa---gaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||   |||||||||||||| ||| |||||| |||||    
T  32133751 aggaagatgaatgaatgtaatgacttctaatgcgtaatt 32133789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 17464487 - 17464530
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  17464487 tgaggaggagcgggaggacatgttattttggtcctcaaccaaaa 17464530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 11028556 - 11028417
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11028556 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 11028457  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  11028456 acgaggaagaatgaatgtaatggcttttaatgcctaattg 11028417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 6331 - 6470
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  6331 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggttaagcctattgatttgtgtg 6430  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  6431 acgaggaagaatgaatgtaatggctttttatgcctaattg 6470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 8575242 - 8575381
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  8575242 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactatagcggacaagccgattgatttgtgtg 8575341  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8575342 acgaggaagaatgaatgtaatggcttttaatgcctaattg 8575381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 38855263 - 38855124
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38855263 cactcgaggttgaggaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 38855164  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38855163 acgaggaagaatgaatgtaatggcttttaatgcctaattg 38855124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 19035776 - 19035915
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||    
T  19035776 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtgtg 19035875  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19035876 acgaggaagaatgaatgtaatggcttttaatgcctaattg 19035915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 8539085 - 8538947
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||    
T  8539085 cactcgaggttgaggaggagcaggaggacatgctatttcggtcctcaaccaaaacaaggtaccgtagggactgtagcgggcaacccgattgatttgtgtg 8538986  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8538985 acgaggaagaatgaatgtaatggcttttaatgcctaatt 8538947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 11347909 - 11347770
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||     
T  11347909 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtgtt 11347810  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  11347809 acgaggaagaatgaatgcaatgacttttaatgcctaattg 11347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 27660478 - 27660617
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  27660478 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtatcggacaagccgattgatttgtgtg 27660577  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  27660578 acgagaaagaatgaatgtaatgacttttaatgcctaattg 27660617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 34682911 - 34683047
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| ||  ||||||| ||||||||||    
T  34682911 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggttccccagggactgtagcgggcaactcgattgacttgtgtgacg 34683010  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  34683011 aggaagaatgaatgtaatggcttttaatgcctaattg 34683047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 30710708 - 30710569
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  30710708 cactcgaggttgaggaggagcgagaggacatgttatttcggtcctcgaccaaaacaaggtactgcagggactgtagcggacaagccaattgatttgtgtg 30710609  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  30710608 acgaggaagaataaatgtaatgacttttaatgcctaattg 30710569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 3602563 - 3602431
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||  || |||||||| |||||||||||||    
T  3602563 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcc-cagggactgtagcggacaatccgattgacttgtgtgacgagg 3602465  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  3602464 aagaatgaatgtaatggcttttaatgcctaattg 3602431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 18309482 - 18309349
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| || |||||||  |||||||||||||    
T  18309482 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcccaagggactgtagcgggcaacccgattgcattgtgtgacgagg 18309383  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  18309382 aagaatgaatgtaatggcttttaatgcctaattg 18309349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 25499303 - 25499170
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| || || ||||||||||||| || |||||||| |||||||||||||    
T  25499303 aggtggaggaggagcgggaggacatactattttggtcctcaaccaaaacaaggtgccccaaggactgtagcgggcaacccgattgacttgtgtgacgagg 25499204  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    | ||||||||||||||||||||||||||||||||    
T  25499203 atgaatgaatgtaatggcttttaatgcctaattg 25499170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 35566496 - 35566360
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||| || |||||||||||||||  || |||||||| ||||||||||    
T  35566496 tcgaggttgaggcggagcgtgaggacatgctattttggtcctcaaccaaaacaaggtgcctcagggactgtagcggccaacccgattgacttgtgtgacg 35566397  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  35566396 aggaagattgaatgtaatggctcttaatgcctaattg 35566360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 1399288 - 1399421
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| || |||||| |||||||   || ||| |||| |||||||||||||    
T  1399288 aggttgaggaggagcgggaggacatgctattttgatcctcaatcaaaacaaggtgccccagggattgtagcgaacaacccggttgacttgtgtgacgagg 1399387  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  1399388 aagaatgaatgtaatggcttttaatgcctaattg 1399421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 20199562 - 20199451
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| || || |||||||||||||||| || |||||||| |||||||||||||    
T  20199562 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaagtgccccagggactgtagcgggcaacccgattgacttgtgtgacgagg 20199463  T
Q  128 aagaatgaatgt 139  Q
    ||||||||||||    
T  20199462 aagaatgaatgt 20199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 35927064 - 35927197
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||  ||||||| || |||||||  |||||||||     
T  35927064 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgccccagggac--tagcgggaaacccgattggcttgtgtgacc 35927161  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||||||||||||||  |||||||||||    
T  35927162 aggaagaatgaatgtaatggcttccaatgcctaatt 35927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 7484476 - 7484582
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | || ||| || ||||| |||||||| |    
T  7484476 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggataacccaattgacttgtgtgatg 7484575  T
Q  125 aggaaga 131  Q
    |||||||    
T  7484576 aggaaga 7484582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 1972603 - 1972533
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||  |||| || ||||||||||    
T  1972603 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaagcaaaagcaggtgccccagggactgt 1972533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 7400930 - 7400798
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa-- 129  Q
    ||||||||||||| |||||||| |||||||||||||||||||||  |||| || || ||||||| | ||  || || ||||| |||||||||||||||      
T  7400930 tgaggaggagcggaaggacatgttatttcggtcctcaaccaaaatcaggtgcctcaaggactgtcgaggacaacccaattgacttgtgtgacgaggaaga 7400831  T
Q  130 -gaatgaatgtaatggcttttaatgcctaattg 161  Q
     || ||||| ||||||||| ||||| |||||||    
T  7400830 tgattgaatataatggcttgtaatgtctaattg 7400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 1696034 - 1695934
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| || ||||| ||||||  |||| || || ||||||| | ||  || |||||||| ||||||||||    
T  1696034 tcgaggttgaggaggagcgggaggacatgctattttggccctcagccaaaagcaggtgccccaaggactgtcgaggacaacccgattgacttgtgtgacg 1695935  T
Q  125 a 125  Q
    |    
T  1695934 a 1695934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 4723074 - 4723124
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  4723074 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 4723124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 6792430 - 6792480
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  6792430 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 6792480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 36349287 - 36349386
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||| ||||||  |||| |  |||||||||| | ||  || |||||||| || |||||||    
T  36349287 tcgaggttgaggaagagcgggaggacatgct-ttttggtcctcagccaaaagcaggtgctccagggactgtcgaggacaacccgattgacttatgtgacg 36349385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 31239224 - 31239181
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    |||||||||| || |||||||||||||| |||||||||||||||    
T  31239224 tgaggaggagtggaaggacatgctattttggtcctcaaccaaaa 31239181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 6176415 - 6176554
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  6176415 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 6176514  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6176515 acgaggaagaatgaatgtaatggcttttaatgcctaattg 6176554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 21016277 - 21016416
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21016277 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 21016376  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21016377 acgaggaagaatgaatgtaatggcttttaatgcctaattg 21016416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 49095852 - 49095713
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  49095852 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 49095753  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  49095752 acgaggaagaatgaatgtaatggcttttaatgcctaattg 49095713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 40352879 - 40353015
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  40352879 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagcgactgtagcggacaagccgattgatttgtgtgacg 40352978  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  40352979 aggaagaatgaatgtaatggcttttaatgcctaattg 40353015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 55797850 - 55797711
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  55797850 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcatggactgtagcggacaagccaattgatttgtgtg 55797751  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55797750 acgaggaagaatgaatgtaatggcttttaatgcctaattg 55797711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 41793902 - 41794041
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||    
T  41793902 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtgtg 41794001  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41794002 acgaggaagaatgaatgtaatggcttttaatgcctaattg 41794041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 34152267 - 34152403
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||||| || ||| |||| ||||||||||    
T  34152267 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccccagggactgtagcgggcaacccggttgacttgtgtgacg 34152366  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  34152367 aggaagaatgaatgtaatggcttttaatgcctaattg 34152403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 56140122 - 56139983
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  56140122 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtg 56140023  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| ||||||||||| ||| ||||||||||||||||    
T  56140022 acgaggatgaatgaatgtagtggtttttaatgcctaattg 56139983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 51427182 - 51427319
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttc-ggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgac 123  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  || |||||||| ||||||| || |||||||| |||||||||    
T  51427182 tcgaggttgaggaggagcgggaggacatgctatttttggtcctcaaccaaaacaaggcgccccagggactatagcgggcaacccgattgacttgtgtgac 51427281  T
Q  124 gaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  51427282 gaggaagaatgaatgtaatggcttttaattcctaattg 51427319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 44559308 - 44559444
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||| |||||||||||| || ||| |||| ||||||||||    
T  44559308 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccccagagactgtagcgggcaacccgtttgacttgtgtgacg 44559407  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||| ||||||||||||||| |||||||||||||||||    
T  44559408 aggcagaatgaatgtaatgacttttaatgcctaattg 44559444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 6281503 - 6281642
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||| || |||||||| ||||||| || |||||||| |||||||    
T  6281503 cactcgaggttgaggaggagcaggaggacatgctattttgatcctcaatcaaaacaaggtgccccagggactttagcgggcaacccgattgacttgtgtg 6281602  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  6281603 acgaggaagaatgaatataatggtttttaatgcctaattg 6281642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 37867679 - 37867540
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| || ||||||||||||||||  | || ||||| |||||||    
T  37867679 cactcgaggttgaggaggagcgggaggacatgttattttggtcctcaacaaaaacaaggtgccccagggactgtagcgggcgacccaattgacttgtgtg 37867580  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  37867579 acgaggaataatgaatgtaatggcttttaatgcttaattg 37867540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 956438 - 956571
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| || ||  || |||  |||||||||||||    
T  956438 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcaggcaactcgtttggcttgtgtgacgagg 956537  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||||||||||||||    
T  956538 aagaatgaatgtaatgacttttaatgcctaattg 956571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 34528798 - 34528914
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| || |||||||| |||||||    
T  34528798 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggattgtagcgggaaacccgattgacttgtgtg 34528897  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  34528898 acgaggatgaatgaatg 34528914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 49572323 - 49572190
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||  ||||| ||||| | | || |||||||| |||||||||||||    
T  49572323 aggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccatagggattgtagtgtgcaacccgattgacttgtgtgacgagg 49572224  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||||||||||||||    
T  49572223 aagaatgaatgtaatgacttttaatgcctaattg 49572190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 1043952 - 1043836
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||| |||||||    
T  1043952 cactcgaggttgaggaggagcgagagaacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtgtg 1043853  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  1043852 acgaggatgaatgaatg 1043836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 39589988 - 39589872
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| || |||||||| |||||||    
T  39589988 cacttgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgtagggactgtagcgggaaacccgattgacttgtgtg 39589889  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  39589888 acgaggatgaatgaatg 39589872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 9490694 - 9490555
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||| || |||||||| ||||||| || |||||||| |||| ||    
T  9490694 cactcgaggttgaggaggagctggaggacatgctattttggtcctcagccaaaacaaggtgccccagggactatagcgggcaacccgattgacttgtctg 9490595  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    | ||||| ||||| ||||| ||||||||||||||||||||    
T  9490594 atgaggatgaatggatgtagtggcttttaatgcctaattg 9490555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 49422739 - 49422870
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||| ||||||| || ||    || ||||||||||    
T  49422739 tcgaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccccaaggactttagcgggcaaccc----gacttgtgtgacg 49422834  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||||||||||||||||||||||||||    
T  49422835 aggaagaatgaatgtaatggcttttaatgcctaatt 49422870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 4784324 - 4784430
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||| || || || |||||||||||||||| || | |||| |  |||||||||    
T  4784324 tcgaggttgaggaggagcggggggacatgctattttggtcctcaaccaaaagaatgtgccccagggactgtagcgggcaacctgattaacctgtgtgacg 4784423  T
Q  125 aggaaga 131  Q
    |||||||    
T  4784424 aggaaga 4784430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 42887505 - 42887399
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || ||  |||||||||||| || |||||| |  |||||||||    
T  42887505 tcgaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaagaaggtgccccaatgactgtagcgggaaacccgattaacctgtgtgacg 42887406  T
Q  125 aggaaga 131  Q
    |||||||    
T  42887405 aggaaga 42887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 21410963 - 21411099
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||  |||| || |||||||||  | ||  || || ||||| |||||||||||||    
T  21410963 aggttgaggagaagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccacagggactggcgaggacaacccaattgacttgtgtgacgagg 21411062  T
Q  128 aa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||   || ||||||||||||||| | |||||||||||    
T  21411063 aagatgattgaatgtaatggcttgtgatgcctaattg 21411099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 21412483 - 21412347
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||  |||| || | |||||||  | ||  || || ||||| |||||||||||||    
T  21412483 aggttgaggagaagcgggaggacatgctattttggtcctcaaccaaaagcaggtgcctctgggactggcgaggacaacccaattgacttgtgtgacgagg 21412384  T
Q  128 aa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||   || ||||||||||||||| | |||||||||||    
T  21412383 aagatgattgaatgtaatggcttgtgatgcctaattg 21412347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 25145751 - 25145619
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa-- 129  Q
    ||||||||||||| |||||||| |||||||||||||||||||||  |||| |  |||||||||| | ||  || || ||||| || ||||||||||||      
T  25145751 tgaggaggagcggaaggacatgttatttcggtcctcaaccaaaagcaggtgcgccagggactgtcgaggacaacccaattgacttatgtgacgaggaaga 25145652  T
Q  130 -gaatgaatgtaatggcttttaatgcctaattg 161  Q
     || ||||||||||||||| ||||| |||||||    
T  25145651 tgattgaatgtaatggcttgtaatgtctaattg 25145619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 36775466 - 36775572
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || ||||||| || | ||  || || ||||| |||||||| |    
T  36775466 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggaccgtcgaggacaacccaattgacttgtgtgatg 36775565  T
Q  125 aggaaga 131  Q
    |||||||    
T  36775566 aggaaga 36775572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 49816397 - 49816497
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||  |||| ||  ||||||||| | ||  || |||||||| ||||||||||    
T  49816397 tcgaggttgaggaggagctggaggacatgctattttggtcctcagccaaaagcaggtgccctagggactgtcgaggacaacccgattgacttgtgtgacg 49816496  T
Q  125 a 125  Q
    |    
T  49816497 a 49816497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 2774245 - 2774195
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  2774245 tcgaggttgaggaggagcgggaggacatgctattttggtcttcaaccaaaa 2774195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 21170705 - 21170599
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||| |||||||||||||| |||||||| ||||||  |||| || | |||||||| | ||  || || ||||| |||||||| |    
T  21170705 tcgaggttgaggaggagcggaaggacatgctattttggtcctcagccaaaagcaggtgcccccgggactgtcgaggacaacccaattgacttgtgtgatg 21170606  T
Q  125 aggaaga 131  Q
    |||||||    
T  21170605 aggaaga 21170599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 43888476 - 43888574
Alignment:
Q  27 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||||||  |||| || ||||||||||   ||  || |||||||| |||||||||||    
T  43888476 gaggttgaggaggagcgggaggacatgctattttggccctcagccaaaagcaggtgccccagggactgtcaaggacaatccgattgacttgtgtgacga 43888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 45940767 - 45940717
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  45940767 tcgaggttgaggaggagcgggaggacatgctatttgggtcctcagccaaaa 45940717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 49790913 - 49790983
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    ||||||||||||||||||||||||||||| ||||| |||||||| ||||||  |||| || ||||||||||    
T  49790913 tcgaggttgaggaggagcgggaggacatgatattttggtcctcagccaaaagcaggtgccccagggactgt 49790983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 51026772 - 51026842
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    |||||||||||||||||||||| |||||||||||| |||||||| ||||||  |||| || ||||||||||    
T  51026772 tcgaggttgaggaggagcgggatgacatgctattttggtcctcagccaaaagcaggtgccccagggactgt 51026842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 4910624 - 4910723
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaaga 131  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||  |||| ||  ||||||||| | ||  || || ||||| |||||||||||||||||    
T  4910624 tgaggaagagcgggaggacatgctattttggtcctcatccaaaagcaggtgccctagggactgtcgaggacaacccaattgacttgtgtgacgaggaaga 4910723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 24076348 - 24076212
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||  |||| || |||| ||| | | ||  || || ||||  |||||||||||||    
T  24076348 aggttgaggaggagcggaaggacttgttatttcggtcctcaaccaaaagcaggtgccccaggcactctcgaggacaacccaattgtcttgtgtgacgagg 24076249  T
Q  128 aa---gaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||   || ||||||||||| ||| ||||| |||||||    
T  24076248 aagatgattgaatgtaatgacttgtaatgtctaattg 24076212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 9718475 - 9718344
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgag---ga 128  Q
    |||||||||| ||||||||||||||||| |||||||| ||||| | |||| |  |||||||||| | ||  || || ||||| ||||||||||||   ||    
T  9718475 tgaggaggagtgggaggacatgctattttggtcctcagccaaagc-aggtgctccagggactgtcgaggacaacccaattgacttgtgtgacgagaaaga 9718377  T
Q  129 agaatgaatgtaatggcttttaatgcctaattg 161  Q
     || |||||||||||| || | |||||||||||    
T  9718376 tgattgaatgtaatggtttgtcatgcctaattg 9718344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 17292886 - 17292843
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||| |||||||||||||||| |||||||||| ||||    
T  17292886 tgaggaggagcaggaggacatgctattttggtcctcaacaaaaa 17292843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 22002936 - 22002797
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  22002936 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 22002837  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22002836 acgaggaagaatgaatgtaatggcttttaatgcctaattg 22002797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 43983836 - 43983697
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  43983836 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 43983737  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  43983736 acgaggaagaatgaatgtaatggcttttaatgcctaattg 43983697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 3936401 - 3936539
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3936401 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 3936500  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3936501 acgaggaagaatgaatgtaatggcttttaatgcctaatt 3936539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 28476616 - 28476477
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  28476616 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaattgatttgtgtg 28476517  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28476516 acgaggaagaatgaatgtaatggcttttaatgcctaattg 28476477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 17425900 - 17425761
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||    
T  17425900 cactcgaggttgaggaggagcgggaggacatgctatttcagtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccaatcgatttgtgtg 17425801  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17425800 acgaggaagaatgaatgtaatggcttttaatgcctaattg 17425761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 39798965 - 39799104
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||    
T  39798965 cactcgcggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcaggaactgtagcggacaagcagattgatttgtgtg 39799064  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39799065 acgaggaagaatgaatgtaatggcttttaatgcctaattg 39799104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 19470607 - 19470740
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| || |||||||| |||||||||||||    
T  19470607 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccctagggactgtagcgggcaacccgattgacttgtgtgacgagg 19470706  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  19470707 aagaatgaatgtaatggcttttaatgcctaattg 19470740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 35492755 - 35492618
Alignment:
Q  23 actcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtga 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||| || |||||||| ||||||||    
T  35492755 actcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagtgggcaacccgattgacttgtgtga 35492656  T
Q  123 cgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  35492655 cgaggaagaatgaatgtaatgg-ttttaatgcctaattg 35492618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 41498104 - 41498237
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  || |||||||| ||||||||| ||     
T  41498104 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagcggccaacccgattgacttgtgtgacaagt 41498203  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||||||||||||||    
T  41498204 aagaatgaatgtaatgacttttaatgcctaattg 41498237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 16583034 - 16582895
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||  ||||||||||| ||| || |||||||| |||||||    
T  16583034 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaacaaaaacaaggtgccctagggactgtagagggcaacccgattgacttgtgtg 16582935  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  16582934 acgaggaagaatgaatgtaatgacttttaatgcataattg 16582895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 23408942 - 23408807
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||| || |||||||| |||||||| |    
T  23408942 tcgagtttgaggaggagcgggaggacatgctattttggtcctcaaccaaatcaaggtaccccagggattgtagcgggcaacccgattgacttgtgtgatg 23408843  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23408842 aggaagaatgaatgtaatgacttttaatgcctaatt 23408807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2918347 - 2918483
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || || ||||||||| ||| || ||| |||| ||||||||||    
T  2918347 tcgaggttgaggaggagcaggaggacatgctattttggtcctcaaccaaaacaaggtgccccatggactgtagtgggcaacccggttgacttgtgtgacg 2918446  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2918447 aggaagaatgaatgtaatgacttttaatgcctaattg 2918483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 43492678 - 43492545
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| || ||| ||||||| |||  || |||||||| |||||||||||||    
T  43492678 aggttgacgaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagtgactgtaacggacaacccgattgacttgtgtgacgagg 43492579  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||||||||||||||    
T  43492578 aagaatgaatgtaatgacttttaatgcctaattg 43492545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 40676404 - 40676537
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||||||||||||||||||||||||  ||||| || ||||||||||| || || |||||||||| || || |||||| | ||||||||| |||    
T  40676404 aggttgaggaggagcgggaggacatgctattttcgtccttaatcaaaacaaggtgccccatggactgtagcaggcaacccgattcacttgtgtgactagg 40676503  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  40676504 aagaatgaatgtaatggcttttaatgcctaattg 40676537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 3942611 - 3942495
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| | ||| ||||||||||||| || |||||||| |||||||    
T  3942611 cacttgaggttgaggaggagcgggaggatatgctattttggtcctcaactaaaacaaggtgcggcatggactgtagcgggaaacccgattgacttgtgtg 3942512  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||| | |||||||||    
T  3942511 acgagaatgaatgaatg 3942495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 33404977 - 33404838
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||  |||| || |||||||||| | ||| || |||||||| |||||||| |    
T  33404977 tcgaggttgaggaggagcggtaggacatgctattttggtcctcaaccaaaagtaggtgccccagggactgtcgagggcaacccgattgacttgtgtgagg 33404878  T
Q  125 aggaaga---atgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||    |||||||| |||||| |||| ||||||||    
T  33404877 aggaagatgcttgaatgtagtggcttgtaatacctaattg 33404838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 6978058 - 6977952
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| ||  ||||||||| | ||  || || |||||||||||||| |    
T  6978058 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgcccaagggactgtcgaggacaacccaattgatttgtgtgatg 6977959  T
Q  125 aggaaga 131  Q
    |||||||    
T  6977958 aggaaga 6977952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 15890958 - 15891025
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||  |||| || ||||||||||    
T  15890958 aggttgaggaggagcggaaggacatgctattttggtcctcaaccaaaagcaggtgccccagggactgt 15891025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 16413257 - 16413362
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||||||||||||||||| |||||| ||||| ||| |||||||||||  |||| | ||||||||||  | ||  || |||||||| ||||||||||    
T  16413257 tcgaggttgaggaggagcgggaagacatgttattttggt-ctcaaccaaaagcaggtgctgcagggactggcgaggacaacccgattgacttgtgtgacg 16413355  T
Q  125 aggaaga 131  Q
    |||||||    
T  16413356 aggaaga 16413362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 17537892 - 17537942
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  17537892 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 17537942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 37311624 - 37311720
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||| |||||||||||||||||||||||| | |||||| ||||||  |||| || |||||||||| | ||  || |||||||| |||||||    
T  37311624 tcgaggttgatgaggagcgggaggacatgctattttgatcctcagccaaaagtaggtgccccagggactgtcgaggacaacccgattgacttgtgtg 37311720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 5421362 - 5421234
Alignment:
Q  27 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgag 126  Q
    |||||||||||||||||| || ||||||||||| |||||||| ||||||  |||| || |||||||| | | ||  || || ||||| |||||||| |||    
T  5421362 gaggttgaggaggagcggcagaacatgctattttggtcctcagccaaaagcaggtgccccagggactctcgaggacaacccaattgacttgtgtgatgag 5421263  T
Q  127 gaa---gaatgaatgtaatggcttttaat 152  Q
    |||   || |||||||||||| |||||||    
T  5421262 gaagatgattgaatgtaatgggttttaat 5421234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 34520699 - 34520749
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  34520699 tcgaggttgaggaggagcgggaggacatgctattttggtcttcagccaaaa 34520749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 24107752 - 24107802
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||| ||||||    
T  24107752 tcgaggttgaggaggagcgagaggaaatgctattttggtcctcagccaaaa 24107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 23786767 - 23786804
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctattt 59  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  23786767 cactcgaggttgaggaggagcgggatgacatgctattt 23786804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 2e-66; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 484354 - 484493
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  484354 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 484453  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  484454 acgaggaagaatgaatgtaatggcttttaatgcctaattg 484493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 15031421 - 15031560
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15031421 cactcgaggttgaggaggagcgggaggatatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 15031520  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15031521 acgaggaagaatgaatgtaatggcttttaatgcctaattg 15031560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 45065896 - 45065757
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  45065896 cactcgaggttggggaggagcggaaggacatgctatttcggtcctcaaccaaaacaaggtaccgcatggactgtagcggacaagccgattgatttgtgtg 45065797  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  45065796 acgaggaagaatgaatgtaatgacttttaatgcctaattg 45065757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 28168019 - 28167883
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| ||||||||||    
T  28168019 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgacttgtgtgacg 28167920  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||||||||||||||||||||||||    
T  28167919 aggaagaatgaatgtaatggcttttaatgcctaattg 28167883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 41276294 - 41276155
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||| |||||||    
T  41276294 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtgtg 41276195  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  41276194 acgaggatgaatgaatgtagtggcttttaatgcctaattg 41276155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 41016954 - 41017089
Alignment:
Q  26 cgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  41016954 cgaggttgaggatgagcaggaggacatgctatttcggtcctcaaccaaaacaaggtaccacagggactgtagcgggcaacccgattgatttgtgtgacga 41017053  T
Q  126 ggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
     ||||||||||||||||| |||||||||||||||||    
T  41017054 agaagaatgaatgtaatgacttttaatgcctaattg 41017089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 24862565 - 24862426
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| || ||| |||| |||||||    
T  24862565 cactcgaggttgaggaggagtgggaggacatgctattttggtcctcaaccaaaacaaggtgccgtagggactgtagcgggaaacccgtttgacttgtgtg 24862466  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  24862465 acgaggatgaatgaatgtaatggcttttaatgcctaattg 24862426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 41855978 - 41856117
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||| || |||||||||||||||| || ||||||||||||||||    
T  41855978 cactcgaggttgaggaggagcgggaggacatgctattttggttcttaaccaaaacaaggtgccccagggactgtagcgggcaacccgattgatttgtgtg 41856077  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  41856078 acaaggaagaatgaatgtaatggtttttaatgcctaattg 41856117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 42604670 - 42604532
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||  || ||| || |||||||| |||||||    
T  42604670 cactcgaggttgaggaggagcgggaggacatgctatttcgatcctcaaccaaaacaaggtgccccagggactccagtgggcaacccgattgacttgtgtg 42604571  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42604570 acgaggaagaatgaatgtaatggtttttaatgcctaatt 42604532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 18439285 - 18439418
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||| || | ||| || |||||||| || ||||||||||    
T  18439285 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccctagggacagttgtgggaaacccgattgacttttgtgacgagg 18439384  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||    
T  18439385 aagaatgaatgtaatggcttttaatgcctaattg 18439418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 22 - 160
Target Start/End: Complemental strand, 40703580 - 40703442
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || |||||||||||| | | || |||||||| |||||||    
T  40703580 cactagaggttgaggaggagcaagaggacatgctatttcgatcctcaaccaaaacaaggtgccccagggactgtagtgtgcaacccgattgacttgtgtg 40703481  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  40703480 acgaggaagaattaatgtaatggtttttaatgcctaatt 40703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 22550280 - 22550173
Alignment:
Q  27 gaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgag 126  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| || |||||||| ||||||||||||    
T  22550280 gaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggacagtagcgggaaacccgattgacttgtgtgacgag 22550181  T
Q  127 gaagaatg 134  Q
    || |||||    
T  22550180 gatgaatg 22550173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 44051651 - 44051535
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| | ||| ||| ||||||||||||||| || |||||||| |||||||    
T  44051651 cactcgaggttgagaaggagcgggaggacatgctattttggtcctcaatcaaaagagggtgccgtagggactgtagcgggaaacccgattgacttgtgtg 44051552  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  44051551 acgaggatgaatgaatg 44051535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 26487682 - 26487612
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || ||||||||||    
T  26487682 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgt 26487612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 42167923 - 42168026
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || | |||||||| | ||  || || ||||| |||||||| ||||    
T  42167923 aggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccggggactgtcgaggacaacccaattgacttgtgtgatgagg 42168022  T
Q  128 aaga 131  Q
    ||||    
T  42168023 aaga 42168026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 38032888 - 38032938
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  38032888 tcgaggttaaggaggagcgggaggacatgctattttggtcctcagccaaaa 38032938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19241648 - 19241741
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||  || | || ||||||||||   ||  || |||||||| |||||||||||    
T  19241648 tgaggaggagcgggaggacatactatttttgtcctcacccaaaagcagttgccccagggactgtcaaggacaacccgattgacttgtgtgacga 19241741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 19314832 - 19314925
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    ||||||||||||||||||||| ||||||  ||||||| ||||||  || | || ||||||||||   ||  || |||||||| |||||||||||    
T  19314832 tgaggaggagcgggaggacatactatttttgtcctcacccaaaagcagttgccccagggactgtcaaggacaacccgattgacttgtgtgacga 19314925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 13634396 - 13634535
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  13634396 cactcgaggttgaggagtagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 13634495  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  13634496 acgaggaagaatgaatgtaatggcttttaatgcctaattg 13634535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 49428568 - 49428429
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||    
T  49428568 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagtgggcaacccggttgatttgtgtg 49428469  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  49428468 acgaggaagaatgaatataatggcttttaatgcctaattg 49428429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 48227738 - 48227602
Alignment:
Q  24 ctcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgac 123  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  48227738 ctcgaggttgaggaggagcgagaggacatgctattttggtcctcaaccaaaacaaggtaccgcagggactgtagcgggcaacccgattgatttgtgtgac 48227639  T
Q  124 gaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    |||||||||||||||||||||||||||| ||||||||    
T  48227638 gaggaagaatgaatgtaatggcttttaaagcctaatt 48227602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 35525174 - 35525312
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||||||| || |||||||| |||||||    
T  35525174 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggaatgtagcgggcaa-ccgattgacttgtgtg 35525272  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  35525273 acgaggaagaatgaatgtaatggcttttaatgcctaattg 35525312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 18974533 - 18974401
Alignment:
Q  29 ggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagga 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  || |||||||| ||||||||||||||    
T  18974533 ggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtgccccagggactgtagcggacaacccgattgacttgtgtgacgagga 18974434  T
Q  129 agaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||||||||||||||| ||||||||||||||||    
T  18974433 agaatgaatgtaatgggttttaatgcctaattg 18974401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 42570771 - 42570906
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||| || |||||||| ||||||||||    
T  42570771 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcctcagggactgtagagggcaacccgattgacttgtgtgacg 42570870  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||||||||| ||||||||||||||||    
T  42570871 aggaagaatgaatgtaatgacttttaatgcctaatt 42570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 49925426 - 49925564
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||| || |||||||| |||||||    
T  49925426 cactcgaggttgacgaggagcgggaggacatgttatttcggtcctcaaccaaaacaaggtgccttagggactgtagcgggcaacccgattgacttgtgtg 49925525  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  49925526 acgaggaagaatgaatgtaatggtttttaatgcctaatt 49925564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 29437162 - 29437024
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  29437162 cactcgaagttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgcc-cagggactgtagcgggcaacccgattgacttgtgtg 29437064  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  29437063 acgaagaagaatgaatgtaatggcttttaatgcctaattg 29437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 27485700 - 27485838
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||  || |||||||| |||||||    
T  27485700 cactcgaggttgaggaggagcaggaggacatgctattttggtcctcaaccaaaacaaggtgccgca-ggactgtagcggaaaacccgattgacttgtgtg 27485798  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  27485799 acgaggatgaatgaatgtaatggctttaaatgcctaattg 27485838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 26494684 - 26494548
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||||||||| || |||||||| |||| |||||    
T  26494684 tcgaagttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggtgctccagggactgtagcgggcaacccgattgacttgtatgacg 26494585  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| |||||||||||||||||||||||||||||    
T  26494584 aggaagactgaatgtaatggcttttaatgcctaattg 26494548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 41803452 - 41803316
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  | || ||||||||||||| || |||||||| |||||||||     
T  41803452 tcgaggttgaggaggagcgggaggacatgttattttggtcctcaaccaaaacaaggtgtcccaaggactgtagcgggcaacccgattgacttgtgtgaca 41803353  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41803352 aggaagaatgaatgtaatggcttttaaggcctaattg 41803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 51271032 - 51270916
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||| |||||||    
T  51271032 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaaacccgattgacttgtgtg 51270933  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  51270932 acgaggatgaatgaatg 51270916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 13974155 - 13974016
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||| ||||||||||||||  |||||||||||||||| | ||||||||||||||||||| || |||||||||||||||| || |||||| | |||||||    
T  13974155 cactccaggttgaggaggagatggaggacatgctattttgttcctcaaccaaaacaaggtgccccagggactgtagcgggcaacccgattaacttgtgtg 13974056  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||| |||||||| |||||||    
T  13974055 acgaggaagaatgaatgtaatggtttttaatgtctaattg 13974016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 46142438 - 46142555
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||| || |||||||| |||||||| ||||    
T  46142438 aggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgcccctgggactgtagcgggcaacccgattgacttgtgtgatgagg 46142537  T
Q  128 aagaatgaatgtaatggc 145  Q
    ||||||||||||||||||    
T  46142538 aagaatgaatgtaatggc 46142555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 29761157 - 29761273
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |  |||||||  |||||||    
T  29761157 cactcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccgcagggactgtagcgggaatcccgattggcttgtgtg 29761256  T
Q  122 acgaggaagaatgaatg 138  Q
    ||||||| |||||||||    
T  29761257 acgaggatgaatgaatg 29761273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 49397872 - 49397736
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||| |||||||||||||| |||||| |||| || ||||||||| ||| || || ||||||||||||| || |||||||| ||||||||||    
T  49397872 tcgaggttgaggatgagcgggaggacatactattttggtcatcgaccaaaacacggtgccccaaggactgtagcgggcaacccgattgacttgtgtgacg 49397773  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    | |||||||||||||||||||||||||||||||||||    
T  49397772 atgaagaatgaatgtaatggcttttaatgcctaattg 49397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 24363051 - 24363183
Alignment:
Q  29 ggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagga 128  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||| ||||| |  |||||||||||| ||| || | |||||| ||||||||||||||    
T  24363051 ggttgaggaggagtgggaggatatgctattttggtcctcaaccaaaagaaggtgctccagggactgtagtgggcaacctgattgacttgtgtgacgagga 24363150  T
Q  129 agaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||| |||||||||||||    
T  24363151 agaatgaatgtaatggcttctaatgcctaattg 24363183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 6436940 - 6436803
Alignment:
Q  31 ttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg-------ac 123  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||| ||||||||| || |||||||| |||||||       ||    
T  6436940 ttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacatggtgccccagggattgtagcgggcaacccgattgacttgtgtgacgactgac 6436841  T
Q  124 gaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6436840 gaggaagaatgaatgtaatggcttttaatgcctaattg 6436803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 36911106 - 36910972
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| || || ||| |||| ||||| ||||    
T  36911106 tcgaggttgagaaggagcgggaggacatgctattttggtcctcaaccaaaacaaggtgccccagggactgtagc-ggcaacccggttgacttgtgcgacg 36911008  T
Q  125 aggaagaatgaatgtaatggcttttaatgcctaatt 160  Q
    ||||||||||||| ||| | ||||||||||||||||    
T  36911007 aggaagaatgaatataaagacttttaatgcctaatt 36910972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 44336895 - 44336974
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcggg 101  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  44336895 cactcgaggttgaagagaagcgggaggacatgctattttggtcctcaaccaaatcaaggtgccgcagggactgtagcggg 44336974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 26634188 - 26634244
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggt 81  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26634188 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaacaaggt 26634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 13284675 - 13284550
Alignment:
Q  36 gaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaa---gaa 132  Q
    |||||||| ||||||||||||||| |||||||||  ||||  | || ||  ||||||||||||||| || ||||||||||||||||| ||||||   |||    
T  13284675 gaggagcgagaggacatgctattttggtcctcaatgaaaagcaagtgcccaagggactgtagcgggcaacccgattgatttgtgtgatgaggaagatgaa 13284576  T
Q  133 tgaatgtaatggcttttaatgcctaa 158  Q
    |||||||||||| || ||||||||||    
T  13284575 tgaatgtaatggtttctaatgcctaa 13284550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 15355768 - 15355874
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||| |||||||| | | ||  || || ||||| |||||||| |    
T  15355768 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtaccccagggactatcgaggacaacccaattgacttgtgtgatg 15355867  T
Q  125 aggaaga 131  Q
    |||||||    
T  15355868 aggaaga 15355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 23343743 - 23343637
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||| || |||||| ||| | ||  || || ||||| |||||||| |    
T  23343743 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagcaggtgccccagggattgtcgaggacaacccaattgacttgtgtgatg 23343644  T
Q  125 aggaaga 131  Q
    |||||||    
T  23343643 aggaaga 23343637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 35585886 - 35585992
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  35585886 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatg 35585985  T
Q  125 aggaaga 131  Q
    |||||||    
T  35585986 aggaaga 35585992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 14172740 - 14172796
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggt 81  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  14172740 tcgaggttgaggaggagcgggaggacatgctattttggtcctcaaccaaaagaaggt 14172796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 37779372 - 37779266
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  37779372 tcgaggttgaggaggagtgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatg 37779273  T
Q  125 aggaaga 131  Q
    |||||||    
T  37779272 aggaaga 37779266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 38044188 - 38044258
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||  |||| || ||||||||||    
T  38044188 tcgaggttgaggaggagcgggaggacatgctatttttgtcctcaaccaaaagcaggtgcctcagggactgt 38044258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 49260663 - 49260769
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||| |||||| |||||||||||||| |||||||| ||||||  ||||||| |||||||||| | ||  || || ||||| |||||||| |    
T  49260663 tcgaggttgaggatgagcggaaggacatgctattttggtcctcagccaaaagcaggtaccccagggactgtcgaggacaacccaattgacttgtgtgatg 49260762  T
Q  125 aggaaga 131  Q
    |||||||    
T  49260763 aggaaga 49260769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 17685313 - 17685363
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  17685313 tcgaggttgaggaggagcgggaggacatgctattttggtcctcagccaaaa 17685363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 39856227 - 39856297
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgt 95  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||  |||| || ||||||||||    
T  39856227 tcgaggttgaggaggagcaggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgt 39856297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 16531181 - 16531313
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaag- 130  Q
    |||||||||| ||||||||||||||||| | |||||||||||||  |||| || || ||||||| | ||  || || ||||| ||  ||||||||||||     
T  16531181 tgaggaggagtgggaggacatgctattttgatcctcaaccaaaagcaggtgccccaaggactgtcgaggacaacccaattgagttcagtgacgaggaaga 16531280  T
Q  131 --aatgaatgtaatggcttttaatgcctaattg 161  Q
      | ||||||||| ||||| |||||||||||||    
T  16531281 taattgaatgtaacggcttgtaatgcctaattg 16531313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 24269351 - 24269393
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctc 67  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  24269351 tcgaggttgaggaggagcgggaggacatgctattttggtcctc 24269393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 14771762 - 14771861
Alignment:
Q  32 tgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgaggaaga 131  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||  |||| || || ||| | | | || ||| || ||||| |||||||||||||||||    
T  14771762 tgaggaggagcgggaggacatgatattttggttctcaaccaaaagcaggtgccccaaggaatatcgaggataacccaattgacttgtgtgacgaggaaga 14771861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 40532366 - 40532461
Alignment:
Q  30 gttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||  |||| || ||||||| || | ||  ||  ||||||| |||||||||||    
T  40532366 gttgaggaggagcgggaggacatgctatttttgtcctcagccaaaagcaggtgcctcagggaccgtcgaggacaactcgattgacttgtgtgacga 40532461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 35186227 - 35186177
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| ||||||    
T  35186227 tcgaggttgaggaggagcgggagaacatgctattttggttctcagccaaaa 35186177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 12790265 - 12790354
Alignment:
Q  36 gaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacga 125  Q
    |||||| ||||||||||||||||| |||||||| ||||||  |||| || |||||||||| | ||  || |||||||  |||||||||||    
T  12790265 gaggagtgggaggacatgctattttggtcctcagccaaaagcaggtgccccagggactgtcgaggacaacccgattgccttgtgtgacga 12790354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 5822 - 5961
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  5822 cactcgaggttgaggaggagcgggaggacatgctatttaggtcctcaaccaaaagaaggtaccgcagggactgtagcggacaagccgattgatttgtgtg 5921  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  5922 acgaggaagaatgacagtaatggcttttaatgcctaattg 5961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 3005 - 2866
Alignment:
Q  22 cactcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtg 121  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| || |||||||||||||||| || |||||||| |||||||    
T  3005 cactcgaggttgaggaggagcgggatgacatgctattttggtcctcaaccaaaacaaggtgccacagggactgtagcgggaaacccgattgacttgtgtg 2906  T
Q  122 acgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  2905 acgaggaggaatgaatgtaatgacttttaatgcctaattg 2866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 161
Target Start/End: Original strand, 4545 - 4678
Alignment:
Q  28 aggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacgagg 127  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||  ||||||| |||||||||||||    
T  4545 aggttgaggagcagcgggaggacatgctatttcggtcctcaacaaaaacaaggtgccccatggactgtagcgggcaactcgattgacttgtgtgacgagg 4644  T
Q  128 aagaatgaatgtaatggcttttaatgcctaattg 161  Q
    || |||||||||||||||||||||||||||||||    
T  4645 aataatgaatgtaatggcttttaatgcctaattg 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 1562 - 1456
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    ||||||||||||||||||||| | ||||||||||||  ||||||||||||| ||||| || |||||||||| | ||  || || ||||| ||||||||||    
T  1562 tcgaggttgaggaggagcgggtgaacatgctatttctatcctcaaccaaaagaaggtgcctcagggactgtcgaggacaacccaattgacttgtgtgacg 1463  T
Q  125 aggaaga 131  Q
    |||||||    
T  1462 aggaaga 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 5526 - 5420
Alignment:
Q  25 tcgaggttgaggaggagcgggaggacatgctatttcggtcctcaaccaaaacaaggtaccgcagggactgtagcgggtaagccgattgatttgtgtgacg 124  Q
    |||||||| |||||||| ||||||||||||||||| |||||||| ||||||| |||| || |||||||||| | ||  || || ||||| |||||||| |    
T  5526 tcgaggttaaggaggagtgggaggacatgctattttggtcctcagccaaaaccaggtgccccagggactgtcgaggacaacccaattgacttgtgtgatg 5427  T
Q  125 aggaaga 131  Q
    |||||||    
T  5426 aggaaga 5420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 17037 - 17075
Alignment:
Q  123 cgaggaagaatgaatgtaatggcttttaatgcctaattg 161  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  17037 cgaggaagaatgactgtaatagcttttaatgcctaattg 17075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 9707 - 9666
Alignment:
Q  34 aggaggagcgggaggacatgctatttcggtcctcaaccaaaa 75  Q
    ||||||||||| |||||||| ||||| |||||||||||||||    
T  9707 aggaggagcggaaggacatgttattttggtcctcaaccaaaa 9666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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