View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7650_low_17 (Length: 256)
Name: NF7650_low_17
Description: NF7650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7650_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 37430484 - 37430722
Alignment:
| Q |
1 |
tcccttttgagccgtctttatttatgaatggaatctcatttctttcgaccaaaaagaaatgcannnnnnnaacccaacaaaaacacctttcgctagaggg |
100 |
Q |
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| T |
37430484 |
tcccttttgagccgtctttatttatgaatggaatctcatttctttcgaccaaaaagaaatgcatttttttaacccaacaaaaacacctttcgctagaggg |
37430583 |
T |
|
| Q |
101 |
gcgcgagtatattatgttgaatacatagagtatattaatctctcttactcaactgatagctagttaaggatgtaagcaactaaagagaagctagaacaaa |
200 |
Q |
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| T |
37430584 |
gcgcgagtatattatgttgaatacatagagtatattaatctctcttactcaactgatagctagttaaggatggaagcaactaaagaaaagctagaacaaa |
37430683 |
T |
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| Q |
201 |
tagcctaaaccaatatagttcagacagaaatgacttggt |
239 |
Q |
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| T |
37430684 |
tagcctaaaccaatatagttcagacagaaatgacttggt |
37430722 |
T |
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