View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7654_low_8 (Length: 237)
Name: NF7654_low_8
Description: NF7654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7654_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 22 - 224
Target Start/End: Original strand, 8402632 - 8402834
Alignment:
| Q |
22 |
agggtcactcctactcaacccaattaagcaagcaggcttgtgagcaattactggcattgctaaaccacttattgctagatcgaccattgttcaattactg |
121 |
Q |
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| T |
8402632 |
agggtcactcctactcaacccaattaagcaagcaggcttgtgagcaattactggcattgctaaaccacttattgctagatcgaccattgttcaattactg |
8402731 |
T |
|
| Q |
122 |
cataattatgaaacgatgaatcatgtgttttatattcaatggaacgaagaatcatgttgttaaagtgaaaccctttttagttggcatactagctgctctc |
221 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8402732 |
catagttatgaaacgatgaatcatgtgttttatattcaatggaacgaagaatcatgttgttaaagtgaaaccctttttagttggcatactagctgctctc |
8402831 |
T |
|
| Q |
222 |
tgc |
224 |
Q |
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||| |
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| T |
8402832 |
tgc |
8402834 |
T |
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