View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7660_high_19 (Length: 352)
Name: NF7660_high_19
Description: NF7660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7660_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 333
Target Start/End: Original strand, 26210355 - 26210677
Alignment:
| Q |
11 |
acaatatgaccatagcccatccgtaaaattaaggagccccgaaagtgtgacccgactactctcatcacaacctgaaccagaaaacgatgttgttttatgt |
110 |
Q |
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| T |
26210355 |
acaacatgaccatagcccatccgtaaaattaaggagccccgaaagtgtgacccgactactctcatcacaactcgaaccagaaaacgatgttgttttatgt |
26210454 |
T |
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| Q |
111 |
ttcttagacttagacaacgactttgcaccatttttcttcgacattctatctgcggttaaatccacggaacaatcaatatcttcaataacgataattgaac |
210 |
Q |
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| T |
26210455 |
ttcttagacttagacaacgactttgcaccatttttcttcgacattctatctgcggttaaatccacagaacaatcaatatcttcaataacgataattgaac |
26210554 |
T |
|
| Q |
211 |
gatttgttgtttggatcaaaagtgaacgaagctcggagttatcagaaactttcgtaagttccaaatcataaacatcataacatagaaaattcgccattgc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26210555 |
gatttgttgtttggatcaaaagtgaacgaagctcggagttatcagaaactttcgtaagttccaaatcataaacatcataacatagaaaattcgccattgc |
26210654 |
T |
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| Q |
311 |
agcaatgaggctggatttacccg |
333 |
Q |
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||||||||||||||||||||||| |
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| T |
26210655 |
agcaatgaggctggatttacccg |
26210677 |
T |
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