View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7660_high_33 (Length: 239)
Name: NF7660_high_33
Description: NF7660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7660_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 2423621 - 2423392
Alignment:
| Q |
4 |
agattgtttttctccttccattttatttgagtgatt-gtatgaccattcaagtcattagatgacatcatcaagtcattgtatgacatcaaaagttaatgt |
102 |
Q |
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| T |
2423621 |
agattgtttttctccttccattttatttgagtgatttgtatgaccattcaagtcattagatgacatcatcaagtcattgtatgacatcaaaagttaatgt |
2423522 |
T |
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| Q |
103 |
tgtttcataaaagtgtagaccttgaattattttcaaatgatttttatcattgatttgaggttgaacctatcaaaaactacatcacatcacacaattacta |
202 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2423521 |
tgtttcataaaagtgtaaaccttgaattattttcaaatgatttttatcattgatttgaggttgaacctatcaaaaactacatcacatcacacaattacta |
2423422 |
T |
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| Q |
203 |
tcttaaatcgaaatccttcccaccattcat |
232 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
2423421 |
tcttaaatcgaaatccttcccaccattcat |
2423392 |
T |
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