View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7660_high_34 (Length: 239)
Name: NF7660_high_34
Description: NF7660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7660_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 223
Target Start/End: Original strand, 8764110 - 8764314
Alignment:
| Q |
18 |
actctcatcttacaagtcattttcgatgatgagttagacgtcatataaaaataatatatttgtggttgcatgactgtgagttaagagtcttacattgcat |
117 |
Q |
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| T |
8764110 |
actctcatcttataggtcattttcgatgatgagttagacgtcatataaaaataatatatttgtggttgcatgactgtgagttaagagtcttacattgcat |
8764209 |
T |
|
| Q |
118 |
gagataatagataatgagtaagatataaagaagatcgactaatacacctaatgtcttaaatgtatgaagatgtgatgtgatgtctagattcacttgtgcg |
217 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
8764210 |
gagataatagataatgagtaagatataaagaaga-agactaatacatctaatgtcttaaatgtatgaagatgtgatgtgatgtctaaattcacttgtgcg |
8764308 |
T |
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| Q |
218 |
gttctt |
223 |
Q |
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|||||| |
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| T |
8764309 |
gttctt |
8764314 |
T |
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