View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7665_high_55 (Length: 254)
Name: NF7665_high_55
Description: NF7665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7665_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 20 - 240
Target Start/End: Complemental strand, 4774582 - 4774362
Alignment:
| Q |
20 |
attcgtatatgccaacactaatcacataatttcacacgcttacacgcattaatttattatcataaannnnnnnnacaactggatctttttccacttctat |
119 |
Q |
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| T |
4774582 |
attcgtatatgccaacactaatcacataatttcacacgcttacacgcattaatttattatcataaaatttatttacaactggatctttttccacttctat |
4774483 |
T |
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| Q |
120 |
ttatttagaaaggaaagcaaagtaaattcacgagcaccatcataaacaatttacttgtataaatgtcaaattattctattattttcttccaaataaaaaa |
219 |
Q |
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| T |
4774482 |
ttatttagaaaggaaagcaaagtaaattcacgagcaccatcataaacaatttacttgtataaatgtcaaattattctattattttcttccaaataaaaaa |
4774383 |
T |
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| Q |
220 |
ttgatataattcttcgtaagt |
240 |
Q |
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||||||||||||||||||||| |
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| T |
4774382 |
ttgatataattcttcgtaagt |
4774362 |
T |
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