View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7665_low_32 (Length: 362)
Name: NF7665_low_32
Description: NF7665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7665_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 33571723 - 33572053
Alignment:
| Q |
8 |
acattattcttctgtggcatattattaggagtgcctgaggaagaaaatgaagaaaatgatgaagatcctggcgatgctaattgatcagaagataatgaac |
107 |
Q |
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| T |
33571723 |
acattattcttctgtggcatattattaggagtgcctgaggaagaaaatgaagaaaatgatgaagatcctggcgatgctaattgatcagaagataatgaac |
33571822 |
T |
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| Q |
108 |
taggtgatgttgttcttgatgatggagagcttaatgaacctccaaaaccttgtatttcagttgttatttttagtgctttcaaacgtgcctcttttagacc |
207 |
Q |
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| T |
33571823 |
taggtgatgttgttcttgatgatggagagcttaatgaacctccaaaaccttgtatttcagttgttatttttagtgctttcaaacgtgcctcttttagacc |
33571922 |
T |
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| Q |
208 |
ttctccaccttgtaaaagtcttagtatttcgtttgataggttttgcaatctacatccccaattaaacctgaaatcaataattaacaagttgatttaagaa |
307 |
Q |
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| T |
33571923 |
ttctccaccttgtaaaagtcttagtatttcgtttgataggttttgcattctacatccccaattaaacctgaaatcaataattaacaagttgatttaagaa |
33572022 |
T |
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| Q |
308 |
tgaaagttcaaaccaaaattatgaacttgat |
338 |
Q |
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| T |
33572023 |
tgaaagttcaaaccaaaattatgaacttgat |
33572053 |
T |
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