View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7665_low_40 (Length: 329)
Name: NF7665_low_40
Description: NF7665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7665_low_40 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 16 - 329
Target Start/End: Original strand, 4774072 - 4774385
Alignment:
| Q |
16 |
gacatcaatggtagattcattatcttgaatgtgttgggcagaactaatcatacgcctctagcagcagcagtatgagactgagtgctaaagaaacattgag |
115 |
Q |
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| T |
4774072 |
gacatcaatggtagattcattatcttgaatgtgttgggcagaactgatcatacgcctctagcagcagcagtatgagactgagtgctaaagaaacattgag |
4774171 |
T |
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| Q |
116 |
aaggacccgtagttcctacgaaacatatacctaatcttacgtcgtactgtttttctccttttgtacgtggaagatcttcatttgattgtgctggattaag |
215 |
Q |
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| T |
4774172 |
aaggacccgtagttcctacgaaacatatacctaatcttacgtcgtactgtttttctccttttgtacgtggaagatcttcatttgattgtgctggattaag |
4774271 |
T |
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| Q |
216 |
aaattgtgattaattcctaaacttgcataatagtagtggacatcttatattttaatttatgtatgcatttggtgtcagtgtctagattcaacttacgaag |
315 |
Q |
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| T |
4774272 |
aaattgtgattaattcctaaaattgcataatagtagtggacatcttatattttaatttatgtatgcatttggtgtcagtgtctagattcaacttacgaag |
4774371 |
T |
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| Q |
316 |
aattatatcaattt |
329 |
Q |
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| T |
4774372 |
aattatatcaattt |
4774385 |
T |
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