View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7665_low_49 (Length: 271)
Name: NF7665_low_49
Description: NF7665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7665_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 32642728 - 32642493
Alignment:
| Q |
14 |
aatattacaatgagatgagataatggatgccaaatgaagaggtcacatctgcacgtggttgccgattcctctagttattaaactacactgccattttccc |
113 |
Q |
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| T |
32642728 |
aatattacaatgagatgagataatggatgccaaatgaagaggtcacatctgcacgtggttgccgattcctctagttattaaactacactgccattttccc |
32642629 |
T |
|
| Q |
114 |
actaaaaccgttgagtctttcaccacctagctgttgctagctgtctctaatatccctccccatgtgacccttctttccactctctctccaaaaccttagg |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32642628 |
actaaaaccgttgagtctttcaccacctagctgttgctagctgtctctaatatccctccccatgtgacccttctttccactctctctccaaaaccttagg |
32642529 |
T |
|
| Q |
214 |
accttattagaaaatcaataacatattacattacac |
249 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32642528 |
accttattagaaaatcaataacatattacattacac |
32642493 |
T |
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