View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7666_high_14 (Length: 301)
Name: NF7666_high_14
Description: NF7666
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7666_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 10 - 286
Target Start/End: Original strand, 10001370 - 10001646
Alignment:
| Q |
10 |
acattaagaataataactaaaaattaggcaatctatatttgagtgttactccagccaaaaagtagtatgacatttcactatccagttaacatacatacta |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10001370 |
acattaagaataataactaaaaattaggcaatctatatttgagtgttactccagccaaaaagtagtatgacatttcactatccagttaacatacatacta |
10001469 |
T |
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| Q |
110 |
ttcaaattttaataataacaaacccactgcagatctgcataacagaggcacatcatatcatatcattagggcagattgtagaagcaacattattttctca |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10001470 |
ttcaaattttaataataacaaacccactgcagatctgcataacagaggcacatcatatcatatcattagggcagattgtagaagcaacattattttctca |
10001569 |
T |
|
| Q |
210 |
aaggcgccaaatagttaaaatacatgtaaatcaatgccaaaacaatatagtaaaacaatatagtattggagtaaatg |
286 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10001570 |
aaggcgccaaatagttaaattacatgtaaatcaatgccaaaacaatatagtaaaacaatatagtattggagtaaatg |
10001646 |
T |
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