View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7671_high_39 (Length: 205)
Name: NF7671_high_39
Description: NF7671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7671_high_39 |
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Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 51670626 - 51670798
Alignment:
| Q |
20 |
gtttgtggatattcccaccaacttacttcgccactctgtagtggtgaggggtttgagtagcatgcaagaagtcttagttcaaacttcatccccttcattg |
119 |
Q |
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| T |
51670626 |
gtttgtggatattcccaccaacttacttcgccactttgtagtggtgaggggtttgagtagcatgcaagaagtcttagttcaaacttcatccccttcattg |
51670725 |
T |
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| Q |
120 |
tacacaaaaatgatttgccattggaagttgaaaaaggtacaggcaaagaatccagaagtattagaacacgaaa |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51670726 |
tacacaaaaatgatttgccattggaagttgaaaaaggtacaggcaaagaatccagaagtattagaacatgaaa |
51670798 |
T |
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