View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7671_low_12 (Length: 430)

Name: NF7671_low_12
Description: NF7671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7671_low_12
NF7671_low_12
[»] chr2 (30 HSPs)
chr2 (19-430)||(18789411-18789820)
chr2 (19-262)||(18779540-18779786)
chr2 (380-430)||(10109661-10109711)
chr2 (380-430)||(17736789-17736839)
chr2 (387-430)||(7201503-7201546)
chr2 (387-430)||(43424655-43424698)
chr2 (392-430)||(19967414-19967452)
chr2 (387-429)||(32887356-32887398)
chr2 (382-430)||(346141-346189)
chr2 (382-430)||(3196556-3196604)
chr2 (386-430)||(3752796-3752840)
chr2 (387-427)||(23718934-23718974)
chr2 (387-427)||(24106606-24106646)
chr2 (390-430)||(27906245-27906284)
chr2 (387-427)||(31582185-31582225)
chr2 (387-430)||(33063982-33064025)
chr2 (382-429)||(37132997-37133044)
chr2 (387-430)||(40365428-40365471)
chr2 (380-430)||(9517024-9517074)
chr2 (387-428)||(24305327-24305368)
chr2 (387-428)||(39688254-39688295)
chr2 (382-430)||(4226988-4227036)
chr2 (382-426)||(5028856-5028900)
chr2 (380-428)||(7262804-7262852)
chr2 (386-430)||(21929467-21929510)
chr2 (386-430)||(22558973-22559017)
chr2 (382-430)||(29798534-29798582)
chr2 (392-428)||(34685991-34686027)
chr2 (392-428)||(34708412-34708448)
chr2 (387-427)||(41778966-41779006)
[»] scaffold0012 (1 HSPs)
scaffold0012 (382-430)||(118815-118863)
[»] chr4 (25 HSPs)
chr4 (379-430)||(9913895-9913946)
chr4 (379-430)||(4916151-4916202)
chr4 (387-430)||(35287529-35287572)
chr4 (387-430)||(39171392-39171435)
chr4 (387-430)||(43374294-43374337)
chr4 (387-428)||(12698595-12698636)
chr4 (380-424)||(9221960-9222004)
chr4 (380-428)||(35151455-35151503)
chr4 (380-416)||(51847973-51848009)
chr4 (387-430)||(9539215-9539258)
chr4 (387-430)||(9946423-9946466)
chr4 (387-430)||(12502309-12502352)
chr4 (387-430)||(35021489-35021532)
chr4 (383-430)||(36059024-36059071)
chr4 (387-430)||(54859731-54859774)
chr4 (387-430)||(56565005-56565048)
chr4 (387-429)||(23154591-23154633)
chr4 (380-430)||(32430138-32430188)
chr4 (379-429)||(41402217-41402267)
chr4 (379-428)||(12757310-12757359)
chr4 (382-427)||(30780128-30780173)
chr4 (387-428)||(55421591-55421632)
chr4 (382-430)||(11198760-11198808)
chr4 (386-430)||(11949684-11949728)
chr4 (382-430)||(14202496-14202544)
[»] chr5 (24 HSPs)
chr5 (380-430)||(22619870-22619920)
chr5 (383-430)||(40730213-40730260)
chr5 (379-428)||(9584597-9584646)
chr5 (382-430)||(10199015-10199063)
chr5 (382-430)||(24498580-24498628)
chr5 (387-430)||(5551303-5551346)
chr5 (391-430)||(7336341-7336380)
chr5 (387-430)||(8410467-8410510)
chr5 (387-430)||(8543572-8543615)
chr5 (380-427)||(22394034-22394081)
chr5 (383-430)||(22585648-22585695)
chr5 (387-430)||(28207128-28207171)
chr5 (387-430)||(34191429-34191472)
chr5 (387-430)||(35270703-35270746)
chr5 (387-430)||(42473890-42473933)
chr5 (387-430)||(42613226-42613269)
chr5 (384-430)||(3630655-3630701)
chr5 (379-425)||(20718969-20719015)
chr5 (386-428)||(30488923-30488965)
chr5 (387-429)||(39610363-39610405)
chr5 (379-427)||(4040401-4040449)
chr5 (386-430)||(14880408-14880452)
chr5 (382-430)||(16193103-16193151)
chr5 (382-430)||(32559300-32559348)
[»] scaffold0009 (1 HSPs)
scaffold0009 (382-427)||(17724-17769)
[»] chr7 (25 HSPs)
chr7 (387-428)||(44819515-44819556)
chr7 (379-430)||(5526721-5526772)
chr7 (387-430)||(46207756-46207799)
chr7 (387-430)||(47589575-47589618)
chr7 (387-428)||(7670432-7670473)
chr7 (387-427)||(13955479-13955519)
chr7 (387-427)||(41132443-41132483)
chr7 (387-430)||(6023305-6023348)
chr7 (387-430)||(10025990-10026033)
chr7 (387-430)||(18378398-18378441)
chr7 (387-430)||(19416510-19416553)
chr7 (387-430)||(27993051-27993094)
chr7 (387-430)||(35103492-35103535)
chr7 (387-430)||(35142171-35142214)
chr7 (387-430)||(47677599-47677642)
chr7 (382-429)||(48069854-48069901)
chr7 (387-429)||(5458093-5458135)
chr7 (387-424)||(24027081-24027118)
chr7 (386-426)||(30467981-30468021)
chr7 (390-430)||(30781448-30781488)
chr7 (382-430)||(34448627-34448675)
chr7 (386-430)||(36341086-36341130)
chr7 (390-430)||(38728204-38728244)
chr7 (382-426)||(43539121-43539165)
chr7 (386-430)||(48980483-48980527)
[»] scaffold0460 (1 HSPs)
scaffold0460 (386-430)||(1249-1293)
[»] chr1 (31 HSPs)
chr1 (382-430)||(13590106-13590154)
chr1 (386-430)||(41032927-41032971)
chr1 (387-430)||(13673541-13673584)
chr1 (391-430)||(20481096-20481135)
chr1 (387-430)||(26834516-26834559)
chr1 (386-428)||(7550894-7550936)
chr1 (382-430)||(2613718-2613766)
chr1 (390-430)||(39452456-39452496)
chr1 (387-430)||(9527993-9528036)
chr1 (387-430)||(16826350-16826393)
chr1 (387-430)||(23334584-23334627)
chr1 (387-426)||(23524824-23524863)
chr1 (387-430)||(44860905-44860948)
chr1 (387-430)||(48681955-48681998)
chr1 (387-425)||(23203323-23203361)
chr1 (380-430)||(27853351-27853401)
chr1 (380-430)||(43840340-43840390)
chr1 (382-428)||(45701326-45701372)
chr1 (382-427)||(32433112-32433157)
chr1 (387-428)||(50595905-50595946)
chr1 (386-430)||(3157738-3157782)
chr1 (382-426)||(4770645-4770689)
chr1 (382-426)||(10841900-10841944)
chr1 (387-427)||(14520943-14520983)
chr1 (382-426)||(16475671-16475715)
chr1 (382-426)||(17917155-17917199)
chr1 (394-430)||(26755612-26755648)
chr1 (386-430)||(35308181-35308225)
chr1 (387-427)||(42888574-42888614)
chr1 (382-430)||(49843430-49843478)
chr1 (382-430)||(51127907-51127955)
[»] scaffold0006 (3 HSPs)
scaffold0006 (387-430)||(171155-171198)
scaffold0006 (382-430)||(208938-208986)
scaffold0006 (387-428)||(223699-223740)
[»] chr8 (23 HSPs)
chr8 (387-430)||(39433406-39433449)
chr8 (384-429)||(16907576-16907621)
chr8 (380-429)||(26885653-26885702)
chr8 (387-430)||(5728534-5728577)
chr8 (387-430)||(6314345-6314388)
chr8 (387-430)||(14975885-14975928)
chr8 (387-430)||(24023437-24023480)
chr8 (387-430)||(27718916-27718959)
chr8 (379-430)||(32232391-32232442)
chr8 (387-430)||(33105387-33105430)
chr8 (379-430)||(44665763-44665814)
chr8 (382-428)||(1644690-1644736)
chr8 (384-430)||(18148821-18148867)
chr8 (392-430)||(31085891-31085929)
chr8 (387-429)||(37750021-37750063)
chr8 (387-428)||(1764976-1765017)
chr8 (387-428)||(8461858-8461899)
chr8 (382-427)||(39139015-39139060)
chr8 (382-430)||(16340322-16340370)
chr8 (387-427)||(18147455-18147495)
chr8 (386-430)||(33445566-33445610)
chr8 (392-428)||(35103104-35103140)
chr8 (387-427)||(42367728-42367768)
[»] chr6 (16 HSPs)
chr6 (386-429)||(9581963-9582006)
chr6 (382-423)||(24827055-24827096)
chr6 (379-428)||(25934807-25934856)
chr6 (379-430)||(2445295-2445346)
chr6 (387-430)||(4494893-4494936)
chr6 (387-430)||(9444953-9444996)
chr6 (387-430)||(9677231-9677274)
chr6 (387-430)||(13496112-13496155)
chr6 (386-428)||(14350947-14350989)
chr6 (387-429)||(33938701-33938743)
chr6 (382-427)||(12329275-12329320)
chr6 (387-428)||(17935727-17935768)
chr6 (387-428)||(20847533-20847574)
chr6 (387-428)||(26320585-26320626)
chr6 (382-430)||(12204365-12204413)
chr6 (387-427)||(12904339-12904379)
[»] chr3 (22 HSPs)
chr3 (387-430)||(20370303-20370346)
chr3 (387-430)||(32843284-32843327)
chr3 (387-430)||(4332689-4332732)
chr3 (387-430)||(21506780-21506823)
chr3 (387-430)||(22722398-22722441)
chr3 (387-430)||(25340946-25340989)
chr3 (387-430)||(28244126-28244169)
chr3 (379-430)||(39481137-39481188)
chr3 (387-430)||(44579632-44579675)
chr3 (387-430)||(52575943-52575986)
chr3 (387-430)||(53162194-53162237)
chr3 (387-429)||(14827522-14827564)
chr3 (387-429)||(20612299-20612341)
chr3 (387-429)||(43490439-43490481)
chr3 (382-428)||(49088750-49088796)
chr3 (385-430)||(2496551-2496596)
chr3 (383-416)||(29817980-29818013)
chr3 (387-428)||(32836171-32836212)
chr3 (387-428)||(51379801-51379842)
chr3 (382-426)||(3612199-3612243)
chr3 (387-427)||(32629079-32629119)
chr3 (387-427)||(33745098-33745138)
[»] scaffold0135 (1 HSPs)
scaffold0135 (380-424)||(32613-32657)
[»] scaffold0160 (1 HSPs)
scaffold0160 (387-430)||(22907-22950)
[»] scaffold0157 (1 HSPs)
scaffold0157 (387-430)||(18125-18168)
[»] scaffold0011 (1 HSPs)
scaffold0011 (387-430)||(185259-185302)
[»] scaffold0154 (1 HSPs)
scaffold0154 (387-429)||(37532-37574)
[»] scaffold0007 (1 HSPs)
scaffold0007 (390-428)||(244477-244515)
[»] scaffold0062 (1 HSPs)
scaffold0062 (380-429)||(7471-7520)
[»] scaffold0031 (1 HSPs)
scaffold0031 (387-428)||(47263-47304)
[»] scaffold0735 (1 HSPs)
scaffold0735 (387-427)||(1527-1567)
[»] scaffold0016 (1 HSPs)
scaffold0016 (382-430)||(204586-204634)


Alignment Details
Target: chr2 (Bit Score: 357; Significance: 0; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 19 - 430
Target Start/End: Complemental strand, 18789820 - 18789411
Alignment:
Q  19 agtagaaggaggccaatgctcagagatacacgataactgttctgttggcaattgcaatgattattgtaaagtcctttatggtttgaatggattaggttct 118  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18789820 agtagaaggagggcaatgctcagagatatacgataactgttctgttggcaattgcaatgattattgtaaagtcctttatggtttgaatggattaggttct 18789721  T
Q  119 tattgtgatgaattcaacatgtgcacttgtctatacaaaaaagaatcatcaacgtataattgtaatcttgggttgggagcatgcatcaagggtaactgtg 218  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18789720 tattgtgatgacttcaacatgtgcacttgtttatacaaaaaagaatcatcaacgtataattgtaatcttgggttgggagcatgcatcaagggtaactgtg 18789621  T
Q  219 attcagtttgttgcagtgcaagatgtgcttcaaaacttaaacattcttttgggacttgtactaatggtaatccggatagatgcatttgtcactatgtacc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18789620 attcagtttgttgcagtgcaagatgtgcttcaaaacttaaacattcttttgggtcttgtactaatggtaatccggatagatgcatttgtcactatgtacc 18789521  T
Q  319 ggagtagcttactcagattattattatatcgaaataaaagtttatgaatgaaattttcttaatcttatatattttatgcattgttcaaatcaactgagct 418  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  |||| ||||||||||| |||| |||||||| |    
T  18789520 ggagtagcttactcagattattattatatcgaaataaaag--tatgaatgaaattttcttaatcttgcatatattatgcattgtccaaaccaactgagtt 18789423  T
Q  419 aagctcacgagg 430  Q
    ||||||||||||    
T  18789422 aagctcacgagg 18789411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 19 - 262
Target Start/End: Complemental strand, 18779786 - 18779540
Alignment:
Q  19 agtagaaggaggccaatgctcagagatacacgataactgttctgttggcaattgcaatgattattgtaaagtcctttatggtttgaat---ggattaggt 115  Q
    |||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||||| ||||||||||||| |||||   | |||||||    
T  18779786 agtagaaggaggccaatgctcagagatatacgatagctgtgctgctggcaattgcaatgattattgtagagtcctttatggtgtgaatattgcattaggt 18779687  T
Q  116 tcttattgtgatgaattcaacatgtgcacttgtctatacaaaaaagaatcatcaacgtataattgtaatcttgggttgggagcatgcatcaagggtaact 215  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  18779686 tctttttgtgatgactccaacatgtgcacttgtctatacaaaaaagaatcatcaacgtatagttgtaatatggggttgggagcatgcatcaagggtaact 18779587  T
Q  216 gtgattcagtttgttgcagtgcaagatgtgcttcaaaacttaaacat 262  Q
    ||||||||  |||||||| || |||||||||||||||| ||||||||    
T  18779586 gtgattcaagttgttgcaatgtaagatgtgcttcaaaatttaaacat 18779540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 10109661 - 10109711
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  10109661 atcttacatattttatgcattgtccaaaccaactgagctaagctcacgagg 10109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 17736839 - 17736789
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  17736839 atcttacatattttatgcattgttcataccaactgagctaagctcacgagg 17736789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 7201546 - 7201503
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  7201546 atatattatgcattgttcaaaccaactgagctaagctcacgagg 7201503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 43424698 - 43424655
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  43424698 atattttatgcattgttccaatcaactgagctaagctcatgagg 43424655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 430
Target Start/End: Complemental strand, 19967452 - 19967414
Alignment:
Q  392 ttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  19967452 ttatgcattgttcatatcaactgagctaagctcacgagg 19967414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 32887398 - 32887356
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  32887398 atattttatgtattgttccaatcaactgagctaagctcacgag 32887356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 346141 - 346189
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||||||    
T  346141 cttacatatattatgcattattcaaaccaactgagctaagctcacgagg 346189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 3196604 - 3196556
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| |||||||||||||| ||||||||||| ||||||||||||    
T  3196604 cttacatatattatgcattgttcatatcaactgagcaaagctcacgagg 3196556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 3752796 - 3752840
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||||| | |||| |||||||||||||||||    
T  3752796 tatattttatgcattgttcataacaaccgagctaagctcacgagg 3752840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 23718974 - 23718934
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  23718974 atattttatgcgttgttcaaatcaactgagctaaactcacg 23718934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 24106646 - 24106606
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  24106646 atattttatgcgttgttcaaatcaactgagctaaactcacg 24106606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 27906245 - 27906284
Alignment:
Q  390 ttttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27906245 ttttatgcattgttcaa-tcaactgagctaagctcacgagg 27906284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 31582225 - 31582185
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  31582225 atattctatgcattgttcaaaccaactgagctaagctcacg 31582185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 33064025 - 33063982
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  33064025 atatattatgcattgtccatatcaactgagctaagctcacgagg 33063982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 37132997 - 37133044
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||||||||||||||| | || |||||||||||||||||||||    
T  37132997 cttacatattttatgcattgtcccaaccaactgagctaagctcacgag 37133044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 40365428 - 40365471
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  40365428 atattttatgcattgtacataccaactgagctaagctcacgagg 40365471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 9517024 - 9517074
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |||||||||    
T  9517024 atcttgtatatattatgcattgttcataccaactgagctaatctcacgagg 9517074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 24305327 - 24305368
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| || || |||||||||||||||||||    
T  24305327 atattttatgcattgtccatattaactgagctaagctcacga 24305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 39688295 - 39688254
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  39688295 atattttattcattgttcaaatcaactaagctaagttcacga 39688254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 4226988 - 4227036
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||||| || ||| |||| |||||||||||||    
T  4226988 cttacatattttatgcattgttccaaccaattgagttaagctcacgagg 4227036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Complemental strand, 5028900 - 5028856
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||    
T  5028900 cttacatatattatgcattgtcctaatcaactgagctaagctcac 5028856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 7262852 - 7262804
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||| ||||| ||||||||||| || ||||||||||||||| ||||||    
T  7262852 atcttgtatatattatgcattgtccatatcaactgagctaaggtcacga 7262804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 21929510 - 21929467
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||    
T  21929510 tatattttatgcattgtccaac-caactgagctaagctcacgagg 21929467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 22559017 - 22558973
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||    
T  22559017 tatattttatgcattgtccaaaccaactgagttaaactcacgagg 22558973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 29798534 - 29798582
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| || | |||||||| |||||||||||||    
T  29798534 cttaaatattttatgcattgtccataccaactgagttaagctcacgagg 29798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 34685991 - 34686027
Alignment:
Q  392 ttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  34685991 ttatgcattgtccaaaccaactgagctaagctcacga 34686027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 34708412 - 34708448
Alignment:
Q  392 ttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  34708412 ttatgcattgtccaaaccaactgagctaagctcacga 34708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 41778966 - 41779006
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  41778966 atatattatgcattgtccaaatcaactgagctatgctcacg 41779006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 118863 - 118815
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  118863 cttacatattttatgcattgttcaaaccaactgagctaagctcacgagg 118815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 9913946 - 9913895
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  9913946 aatcttgtatattttatgcattgttcataccaactgagctaagctcacgagg 9913895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 4916202 - 4916151
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||| |||| |||||||||||||||| ||||||||||||| ||||||||    
T  4916202 aatcttacatatattatgcattgttcaaaccaactgagctaagttcacgagg 4916151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 35287529 - 35287572
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  35287529 atattttatgcattgttcataccaactgagctaagctcacgagg 35287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 39171392 - 39171435
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  39171392 atattttatgcattgtccatatcaactgagctaagctcacgagg 39171435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 43374294 - 43374337
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  43374294 atattttatgcattgtccatatcaactgagctaagctcacgagg 43374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 12698636 - 12698595
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  12698636 atatattatgcattgtccaaatcaactgagctaagctcacga 12698595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 9222004 - 9221960
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctc 424  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  9222004 atcttacatatattatgcattgttcaaaccaactgagctaagctc 9221960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 35151503 - 35151455
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||||||||||| | || |||||||||||| ||||||    
T  35151503 atcttatatattttatgcattgtttatataaactgagctaagttcacga 35151455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 416
Target Start/End: Complemental strand, 51848009 - 51847973
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgag 416  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51848009 atcttgtatattttatgcattgttcaaatcaactgag 51847973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 9539215 - 9539258
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  9539215 atattttatgcattgtccataacaactgagctaagctcacgagg 9539258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 9946466 - 9946423
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  9946466 atattttatgcattgtccataccaactgagctaagctcacgagg 9946423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 12502309 - 12502352
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||    
T  12502309 atattttctgcattgtccaaatcaactgagctaagctgacgagg 12502352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 35021489 - 35021532
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||| ||||| || ||||||||||||||||||||||||    
T  35021489 atattttatgtattgtccatatcaactgagctaagctcacgagg 35021532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 36059071 - 36059024
Alignment:
Q  383 ttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||||| | ||||||||||||| ||||||||    
T  36059071 ttatgtattttatgcattgttcataccaactgagctaagttcacgagg 36059024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 54859731 - 54859774
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| |||| |||||||||||||||||    
T  54859731 atatattatgcattgttcaaaccaaccgagctaagctcacgagg 54859774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 56565005 - 56565048
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || ||||| ||||||||||||||||||    
T  56565005 atattttatgcattgtccatatcaattgagctaagctcacgagg 56565048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 23154633 - 23154591
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||||||||||||||  || |||||||||||||||||||||    
T  23154633 atattttatgcattgtttcaaccaactgagctaagctcacgag 23154591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 32430138 - 32430188
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| |||||||||||||||||||| |  ||||||| |||||||||||||    
T  32430138 atcttgtatattttatgcattgttcatactaactgagttaagctcacgagg 32430188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 41402267 - 41402217
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||| ||||||||||||||||||  ||||||||||  ||||||||||||    
T  41402267 aatcttgtatattttatgcattgttttaatcaactgacttaagctcacgag 41402217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 12757310 - 12757359
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||| |||||||||||||||| | ||| ||||||| |||||||||||    
T  12757310 aatcttacatattttatgcattgtcctaatgaactgagttaagctcacga 12757359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 30780173 - 30780128
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||||||||||||||| || | |||||||| ||||||||||    
T  30780173 cttatatattttatgcattgtccataccaactgagttaagctcacg 30780128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 55421591 - 55421632
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  55421591 atatattatgcattgtccaaaccaactgagctaagctcacga 55421632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 11198808 - 11198760
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||| | || | ||||||||||||||||||||||    
T  11198808 cttacatattttatgcattctccataccaactgagctaagctcacgagg 11198760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 11949684 - 11949728
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||    
T  11949684 tatatattatgtattgttcttatcaactgagctaagctcacgagg 11949728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 14202496 - 14202544
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| ||||||||| | ||||||||||||| |||||||||||||    
T  14202496 cttacatatattatgcattatccaaatcaactgagttaagctcacgagg 14202544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 22619920 - 22619870
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| |||||||||||||||||||| | ||||||||||||||||||||||    
T  22619920 atcttgtatattttatgcattgttcataccaactgagctaagctcacgagg 22619870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 40730213 - 40730260
Alignment:
Q  383 ttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  40730213 ttatatatattatgcattgttcatatcaacttagctaagctcacgagg 40730260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 9584646 - 9584597
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||| |||||||||||||||||| ||||||||||| ||| |||||||    
T  9584646 aatcttacatattttatgcattgttccaatcaactgagttaaactcacga 9584597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 10199063 - 10199015
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  10199063 cttatatatattatgcattgtccataccaactgagctaagctcacgagg 10199015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 24498628 - 24498580
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||| |||| |||||||||| |||||||||||||    
T  24498628 cttacatattttatgcattattcatatcaactgagttaagctcacgagg 24498580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 5551303 - 5551346
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  5551303 atattttatgcattgttccaaccaactgagctaagctcatgagg 5551346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Original strand, 7336341 - 7336380
Alignment:
Q  391 tttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  7336341 tttatgcattgttcctatcaactgagctaagctcacgagg 7336380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 8410467 - 8410510
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  8410467 atattttatgcattgttcacactaactgagctaagctcacgagg 8410510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 8543615 - 8543572
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||| |||||||| |||||||||||||    
T  8543615 atattttatgcattgtccaaaccaactgagttaagctcacgagg 8543572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 22394081 - 22394034
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||| |||| ||||||||||| || |||||||||||||||||||||    
T  22394081 atcttacatatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 22585695 - 22585648
Alignment:
Q  383 ttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||| |||||||||||||| |||||||||| ||||| |||||||    
T  22585695 ttatatatattatgcattgttcatatcaactgagttaagcccacgagg 22585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 28207171 - 28207128
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  28207171 atattttatgcattgtccataccaactgagctaagctcacgagg 28207128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 34191472 - 34191429
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| | || ||||||||||||||||||||||    
T  34191472 atattttatgcattgtcccaaccaactgagctaagctcacgagg 34191429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 35270703 - 35270746
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| | || ||||||||||||||||||||||    
T  35270703 atattttatgcattgtcccaaccaactgagctaagctcacgagg 35270746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 42473933 - 42473890
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  42473933 atatattatgcattgttccaatcaattgagctaagctcacgagg 42473890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 42613226 - 42613269
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||    
T  42613226 atattttatgcattgtccaaatcaattgaactaagctcacgagg 42613269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 3630701 - 3630655
Alignment:
Q  384 tatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  3630701 tatatattttatatattgttccaaccaactgagctaagctcacgagg 3630655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 425
Target Start/End: Original strand, 20718969 - 20719015
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctca 425  Q
    |||||||| ||| |||||||||||  |||||||||||||||||||||    
T  20718969 aatcttatgtatattatgcattgtctaaatcaactgagctaagctca 20719015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 30488965 - 30488923
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  30488965 tatatattatgcattgttcatatcaactgaactaagctcacga 30488923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 39610363 - 39610405
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| ||||||||||| || |||||||||||||||||||||||    
T  39610363 atatattatgcattgtccatatcaactgagctaagctcacgag 39610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 4040401 - 4040449
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||| ||||||||||||||||||  || ||||||| |||||||||||    
T  4040401 aatcttgtatattttatgcattgtttcaaccaactgatctaagctcacg 4040449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 14880452 - 14880408
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||| ||||||||||| | |||||||| |||||||||||||    
T  14880452 tatattttctgcattgttcataccaactgagttaagctcacgagg 14880408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 16193151 - 16193103
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||||||||||| | ||||||| |||| |||||||||    
T  16193151 cttacatattttatgcattgttcataccaactgaactaaactcacgagg 16193103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 32559348 - 32559300
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||||||||  | ||||| ||||||||||||||||||    
T  32559348 cttacatattttatgcattgtcaatatcaattgagctaagctcacgagg 32559300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 17769 - 17724
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17769 cttatatatattatgcattgtccaaatcaactgagctaagctcacg 17724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 44819515 - 44819556
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  44819515 atattttatgcattgttctaatcaactgagctaagctcacga 44819556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 5526772 - 5526721
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  5526772 aatcttatatatattatgcattgtccataccaactgagctaagctcacgagg 5526721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 46207799 - 46207756
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  46207799 atattttatgcattgttcataccaactgagctaagctcacgagg 46207756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 47589575 - 47589618
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  47589575 atattttatgcattgttcataccaactgagctaagctcacgagg 47589618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 7670473 - 7670432
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  7670473 atatattatgcattgttcaaaccaactgagctaagctcacga 7670432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 13955519 - 13955479
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  13955519 atattttatgcattgttcataccaactgagctaagctcacg 13955479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 41132483 - 41132443
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  41132483 atattttatgtattgttcaaatcaattgagctaagctcacg 41132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 6023348 - 6023305
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||    
T  6023348 atattttaagcattgtccaaaccaactgagctaagctcacgagg 6023305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 10026033 - 10025990
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||| |||||||| |||||||||||||    
T  10026033 atattttatgcattgtccaaaccaactgagttaagctcacgagg 10025990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 18378441 - 18378398
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| | || ||||||||||||||||||||||    
T  18378441 atattttatgcattgtcccaaccaactgagctaagctcacgagg 18378398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 19416553 - 19416510
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  19416553 atattttatgcattgtccataccaactgagctaagctcacgagg 19416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 27993051 - 27993094
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | |||||||| |||||||||||||    
T  27993051 atattttatgcattgttcataccaactgagttaagctcacgagg 27993094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 35103535 - 35103492
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| | || ||||||||||||||||||||||    
T  35103535 atattttatgcattgtcccaaccaactgagctaagctcacgagg 35103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 35142171 - 35142214
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  35142171 atatattatgcattgtccatatcaactgagctaagctcacgagg 35142214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 47677599 - 47677642
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||| || |||||||||||| |||||||||    
T  47677599 atattttatgcattgttctaaccaactgagctaaactcacgagg 47677642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 48069854 - 48069901
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  48069854 cttacatatattatgcattgttcatgtcaactgagctaagctcacgag 48069901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 5458093 - 5458135
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||||||||||||  |||||||||||||||||||||||    
T  5458093 atatattatgcattgttcttatcaactgagctaagctcacgag 5458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 424
Target Start/End: Original strand, 24027081 - 24027118
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctc 424  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  24027081 atattttatgcattgttccaatcaactaagctaagctc 24027118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 426
Target Start/End: Complemental strand, 30468021 - 30467981
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  30468021 tatatattatgcattgttcaaaccaactgagttaagctcac 30467981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 30781488 - 30781448
Alignment:
Q  390 ttttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  30781488 ttttatgcattgtctatatcaactgagctaagctcacgagg 30781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 34448627 - 34448675
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| ||||||||||| |||| |||||||| |||||||||||||    
T  34448627 cttacatatattatgcattgtccaaaccaactgagttaagctcacgagg 34448675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 36341086 - 36341130
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||||| | |||||||| |||||||| ||||    
T  36341086 tatattttatgcattgttcataccaactgagttaagctcaagagg 36341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 38728244 - 38728204
Alignment:
Q  390 ttttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  38728244 ttttatgcattgtccataccaactgagctaagctcacgagg 38728204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 43539121 - 43539165
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    |||| |||| |||||||||||||  ||||||||||||||||||||    
T  43539121 cttacatatattatgcattgttcctatcaactgagctaagctcac 43539165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 48980527 - 48980483
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| ||||||||||| || | ||||||||||||||||||||||    
T  48980527 tatatattatgcattgtccataccaactgagctaagctcacgagg 48980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 1293 - 1249
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||    
T  1293 tatattttatgcattgttcaaaccaactaagctaagctcacgagg 1249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 13590154 - 13590106
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  13590154 cttacatattttatgcattgtccaaaccaactgagctaagctcacgagg 13590106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 41032971 - 41032927
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||||| |||||||||| |||||||||||||    
T  41032971 tatattttatgcattgttcatatcaactgagttaagctcacgagg 41032927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 13673584 - 13673541
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  13673584 atattttatgcattgttcaaaccaaccgagctaagctcacgagg 13673541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 20481135 - 20481096
Alignment:
Q  391 tttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20481135 tttatgcattgttcaaaccaactgagctaagctcacgagg 20481096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 26834559 - 26834516
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  26834559 atattttatgcatcgttcatatcaactgagctaagctcacgagg 26834516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 7550936 - 7550894
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  7550936 tatattttatgcattgttcatatcaactgagttaagctcacga 7550894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 2613766 - 2613718
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| || | ||||||||||||||||||||||    
T  2613766 cttacatattttatgcattgtccataccaactgagctaagctcacgagg 2613718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 39452496 - 39452456
Alignment:
Q  390 ttttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  39452496 ttttatgcattgttcataccaactgagctaagctcacgagg 39452456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 9528036 - 9527993
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||| |||||||||||||| | ||||||||||||||||    
T  9528036 atattttatgtattgttcaaatcaatttagctaagctcacgagg 9527993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 16826393 - 16826350
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  16826393 atattttatgcattgtccatagcaactgagctaagctcacgagg 16826350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 23334627 - 23334584
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||    
T  23334627 atattttatgcattgtccaaatcagctgagttaagctcacgagg 23334584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 426
Target Start/End: Complemental strand, 23524863 - 23524824
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  23524863 atattttatgcattgttccaatcaactgagttaagctcac 23524824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 44860905 - 44860948
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||    
T  44860905 atattttatgcattgtccaaaccaactgagctaagttcacgagg 44860948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 48681955 - 48681998
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||| | ||||||||||||||||||||||    
T  48681955 atatattatgcattgttcataccaactgagctaagctcacgagg 48681998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 425
Target Start/End: Complemental strand, 23203361 - 23203323
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctca 425  Q
    |||||||||||||||||| || |||||||||||||||||    
T  23203361 atattttatgcattgttccaaccaactgagctaagctca 23203323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 27853401 - 27853351
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| ||||| |||||||||||||| | |||||||| |||||||||||||    
T  27853401 atcttgtatatattatgcattgttcataccaactgagttaagctcacgagg 27853351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 43840340 - 43840390
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| |||||||||||||||| || |||||||||| ||| |||||||||    
T  43840340 atcttacatattttatgcattgtccatatcaactgagttaaactcacgagg 43840390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 45701372 - 45701326
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||||||||||| | |||||||||||| |||||||    
T  45701372 cttacatattttatgcattgttcataccaactgagctaaactcacga 45701326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 32433112 - 32433157
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    ||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  32433112 cttatatattttatgcatttttcatatcgactgagttaagctcacg 32433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 50595905 - 50595946
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  50595905 atattttatgcattgttcataccaattgagctaagctcacga 50595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 3157738 - 3157782
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| ||||||||||||||||  || ||||||||||||||||||    
T  3157738 tatatattatgcattgttcaaactaattgagctaagctcacgagg 3157782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 4770645 - 4770689
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    ||||||||| | |||||||||||| |||||||||| |||||||||    
T  4770645 cttatatatatcatgcattgttcatatcaactgagttaagctcac 4770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Complemental strand, 10841944 - 10841900
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    ||||||||| ||||||||||| || |||||||||| |||||||||    
T  10841944 cttatatatattatgcattgtccatatcaactgagttaagctcac 10841900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 14520983 - 14520943
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  14520983 atattttatgcattgtccataccaactgagctaagctcacg 14520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 16475671 - 16475715
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    |||| |||||||||||||||| | ||||||||||| |||||||||    
T  16475671 cttacatattttatgcattgtcctaatcaactgaggtaagctcac 16475715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 17917155 - 17917199
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    |||| |||||||||||||||| || |||||||||||||| |||||    
T  17917155 cttacatattttatgcattgtccatatcaactgagctaaactcac 17917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 26755648 - 26755612
Alignment:
Q  394 atgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||| || ||||||||||||||||||||||||    
T  26755648 atgcattgtccatatcaactgagctaagctcacgagg 26755612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 35308225 - 35308181
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| |||||||||||||| | ||||||| ||||||||||||||    
T  35308225 tatatattatgcattgttcataccaactgaactaagctcacgagg 35308181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 42888614 - 42888574
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  42888614 atattttatgcattgtccataccaactgagctaagctcacg 42888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 49843478 - 49843430
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| |||||||||||||||| ||| |||| |||||||||||||    
T  49843478 cttacatatattatgcattgttcaaaccaattgagttaagctcacgagg 49843430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 51127907 - 51127955
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||| ||||||||||| || || ||||||||||| |||||||||    
T  51127907 cttatatatattatgcattgtccatattaactgagctaaactcacgagg 51127955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 171198 - 171155
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  171198 atattttatgcattgttcaaaccaaccgagctaagctcacgagg 171155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 208986 - 208938
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||||||    
T  208986 cttatatacattatgcattgtccaaaccaactgagctaagctcacgagg 208938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 223699 - 223740
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  223699 atatattatgcattgttcaaactaactgagctaagctcacga 223740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 39433449 - 39433406
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  39433449 atattttatgtattgttcatatcaactgagctaagctcacgagg 39433406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 16907621 - 16907576
Alignment:
Q  384 tatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  16907621 tatatatattatgcattgttcaaatcaactgagttaaactcacgag 16907576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 26885653 - 26885702
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||| ||||||||||||||||||| | |||||||||||| ||||||||    
T  26885653 atcttacatattttatgcattgttcataccaactgagctaaactcacgag 26885702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 5728577 - 5728534
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||  ||||||||||||||||||||||||    
T  5728577 atatattatgcattgttctcatcaactgagctaagctcacgagg 5728534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 6314345 - 6314388
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |  ||||||||||||||||||||||||    
T  6314345 atattttatgcattgtccttatcaactgagctaagctcacgagg 6314388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 14975885 - 14975928
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||| |||||| | ||||||||||||||||||||||    
T  14975885 atattttatgcactgttcataccaactgagctaagctcacgagg 14975928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 24023437 - 24023480
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||||| ||  |||||||||||||||||||||    
T  24023437 atattttatgcattgttccaactaactgagctaagctcacgagg 24023480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 27718916 - 27718959
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  27718916 atatattatgcattgtccatatcaactgagctaagctcacgagg 27718959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 32232391 - 32232442
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||| |||||||||||||| ||||| | | ||||||||||||||    
T  32232391 aatcttatatatattatgcattgttcatatcaattaacctaagctcacgagg 32232442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 33105430 - 33105387
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||| || |||||||||||||||||||    
T  33105430 atatattatgcattgttcaaaccagctgagctaagctcacgagg 33105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 44665763 - 44665814
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||||||||  | ||| ||||||||||||||||||    
T  44665763 aatcttatatattttacgcattgttcgtaccaaatgagctaagctcacgagg 44665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 1644690 - 1644736
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  1644690 cttacatattttatgcattgctcataccaactgagctaagctcacga 1644736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 18148821 - 18148867
Alignment:
Q  384 tatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||| |||||||||||||| || ||||||| |||||||||||||    
T  18148821 tatatatattatgcattgttcatattaactgagttaagctcacgagg 18148867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 31085891 - 31085929
Alignment:
Q  392 ttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  31085891 ttatacattgttcatatcaactgagctaagctcacgagg 31085929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 37750021 - 37750063
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||||||||||||| |||||||||||||| ||||||||    
T  37750021 atatattatgcattgttcatatcaactgagctaaactcacgag 37750063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 1764976 - 1765017
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  1764976 atattttatgcgttgttcatatcaactgagttaagctcacga 1765017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 8461858 - 8461899
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  8461858 atattttatgcattgtcccaaccaactgagctaagctcacga 8461899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Original strand, 39139015 - 39139060
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||| |||||||||||||| || ||| |||||||||||||||||||    
T  39139015 cttacatattttatgcattattaaaaccaactgagctaagctcacg 39139060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 16340370 - 16340322
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||| |||||| || ||||||| ||||||||||||||    
T  16340370 cttacatattttatgcgttgttccaaccaactgaactaagctcacgagg 16340322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 18147495 - 18147455
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  18147495 atattttatgcattgtccaaaccaattgagctaagctcacg 18147455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 33445610 - 33445566
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||    
T  33445610 tatatattatgcattgttcctaccaactgagctaagctcacgagg 33445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Complemental strand, 35103140 - 35103104
Alignment:
Q  392 ttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35103140 ttatgcattgttcataccaactgagctaagctcacga 35103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 42367768 - 42367728
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||| |||||||||||||  |||||||||||||||||||||    
T  42367768 atatattatgcattgttcttatcaactgagctaagctcacg 42367728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 9582006 - 9581963
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  9582006 tatattttatgcattgttccaaccaactgagctaagctcacgag 9581963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 382 - 423
Target Start/End: Complemental strand, 24827096 - 24827055
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagct 423  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  24827096 cttatatattttatgcattgtccatatcaactgagctaagct 24827055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 25934856 - 25934807
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  25934856 aatcttacatatattattcattgttcaaatcaactgatctaagctcacga 25934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 2445346 - 2445295
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| ||||| |||||||||||||| |||||||||| |||||| ||||||    
T  2445346 aatcttgtatatattatgcattgttcatatcaactgagttaagcttacgagg 2445295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 4494893 - 4494936
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  4494893 atattttatgcattgtccataccaactgagctaagctcacgagg 4494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 9444996 - 9444953
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||    
T  9444996 atattttatacattgttcataccaactgagctaagctcacgagg 9444953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 9677274 - 9677231
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||    
T  9677274 atatattatgcattgtccaaaccaactgagctaagctcacgagg 9677231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 13496155 - 13496112
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||| |||||||||| |||||||||||||    
T  13496155 atatattatgcattgttcatatcaactgagttaagctcacgagg 13496112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 428
Target Start/End: Complemental strand, 14350989 - 14350947
Alignment:
Q  386 tatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||||||| |||||||||| ||| |||||||    
T  14350989 tatattttatgcattgttcatatcaactgagttaaactcacga 14350947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 33938701 - 33938743
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  33938701 atatattatgcattgttcataccaactgagctaagctcacgag 33938743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 427
Target Start/End: Complemental strand, 12329320 - 12329275
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||| |||||||||| |||||||| | |||||||||||||||||||    
T  12329320 cttacatattttatgtattgttcataacaactgagctaagctcacg 12329275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 17935768 - 17935727
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| |||| ||||||||||||| ||||||    
T  17935768 atattttatgcattgtccaaaccaactgagctaagttcacga 17935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 20847533 - 20847574
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  20847533 atattttatgcattgtccaaactaactgagctaagctcacga 20847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 26320585 - 26320626
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  26320585 atattttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 12204413 - 12204365
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||| ||||||||||| || ||||||||||||| ||||||||||    
T  12204413 cttacatatattatgcattgtccatatcaactgagctatgctcacgagg 12204365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 12904339 - 12904379
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  12904339 atatattatgcattgttcatatcaactgaggtaagctcacg 12904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 20370303 - 20370346
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  20370303 atattttatgcattgtccatatcaactgagctaagctcacgagg 20370346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 32843284 - 32843327
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  32843284 atattttatgcattgtccaaaccaactgagctaagctcacgagg 32843327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 4332689 - 4332732
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||    
T  4332689 atatattatgcattattcaaaccaactgagctaagctcacgagg 4332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 21506780 - 21506823
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  21506780 atattttatgcattgtccataccaactgagctaagctcacgagg 21506823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 22722441 - 22722398
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  22722441 atattttatgcattgttcatactaactgagctaagctcacgagg 22722398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 25340946 - 25340989
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  25340946 atattttatgcattgtccataccaactgagctaagctcacgagg 25340989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 28244126 - 28244169
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | |||||||| |||||||||||||    
T  28244126 atattttatgcattgttcataccaactgagttaagctcacgagg 28244169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 39481188 - 39481137
Alignment:
Q  379 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||| ||| |||||||||||| || | ||||||||||||||||||||||    
T  39481188 aatcttacataatttatgcattgtccataccaactgagctaagctcacgagg 39481137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 44579675 - 44579632
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  44579675 atattttatgcattgtccataccaactgagctaagctcacgagg 44579632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 52575986 - 52575943
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||    
T  52575986 atattttatgcattgttcataccaactgagctaagcttacgagg 52575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 53162237 - 53162194
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || ||||| ||||||||||||||||||    
T  53162237 atattttatgcattgtccatatcaattgagctaagctcacgagg 53162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 14827564 - 14827522
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||||||||||||| || | |||||||||||||||||||||    
T  14827564 atattttatgcattgtccataccaactgagctaagctcacgag 14827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 20612299 - 20612341
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| ||||||||||||||| |||| |||||||||||||||||    
T  20612299 atatattatgcattgttcaagtcaaatgagctaagctcacgag 20612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 43490439 - 43490481
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  43490439 atatattatgcattgttcataccaactgagctaagctcacgag 43490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 49088796 - 49088750
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||| ||||||||||||||||| | |||||||||||||| |||||||    
T  49088796 cttacatattttatgcattgtttatatcaactgagctaaactcacga 49088750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 2496596 - 2496551
Alignment:
Q  385 atatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||| |||||||||||||| | ||||||| ||||||||||||||    
T  2496596 atatatattatgcattgttcatagcaactgaactaagctcacgagg 2496551  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 416
Target Start/End: Original strand, 29817980 - 29818013
Alignment:
Q  383 ttatatattttatgcattgttcaaatcaactgag 416  Q
    ||||||||||||||||||||||| ||||||||||    
T  29817980 ttatatattttatgcattgttcatatcaactgag 29818013  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 32836212 - 32836171
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  32836212 atattttatgcattgtccataccaactgagctaagctcacga 32836171  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 51379801 - 51379842
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  51379801 atattttatgcattgttcatatcaactgaggtaaactcacga 51379842  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 426
Target Start/End: Original strand, 3612199 - 3612243
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcac 426  Q
    ||||||||| ||||||||| | || ||||||||||||||||||||    
T  3612199 cttatatatattatgcattatccatatcaactgagctaagctcac 3612243  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 32629119 - 32629079
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  32629119 atattttatgcattgtccataccaactgagctaagctcacg 32629079  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 33745138 - 33745098
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  33745138 atattttatgcattgtccatatcaattgagctaagctcacg 33745098  T

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Target: scaffold0135 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 32657 - 32613
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctc 424  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  32657 atcttacatatattatgcattgttcaaaccaactgagctaagctc 32613  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 22950 - 22907
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||    
T  22950 atattttatgcattgttcatatcaactaaactaagctcacgagg 22907  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 18168 - 18125
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||    
T  18168 atattttctgcattgtccaaatcaactgagctaagctgacgagg 18125  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 185302 - 185259
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  185302 atattttatgcattgtccataccaactgagctaagctcacgagg 185259  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 37574 - 37532
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    ||||||||||||||||||| | ||||| |||||||||||||||    
T  37574 atattttatgcattgttcataccaacttagctaagctcacgag 37532  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 244515 - 244477
Alignment:
Q  390 ttttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  244515 ttttatgcattgtccatatcaactgagctaagctcacga 244477  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 7520 - 7471
Alignment:
Q  380 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 429  Q
    |||||| ||||||||||||||||||| | ||| |||| ||||||||||||    
T  7520 atcttacatattttatgcattgttcataccaattgagttaagctcacgag 7471  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 47263 - 47304
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacga 428  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  47263 atattttatgcattgtccataccaactgagctaagctcacga 47304  T

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Target: scaffold0735 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 427
Target Start/End: Complemental strand, 1567 - 1527
Alignment:
Q  387 atattttatgcattgttcaaatcaactgagctaagctcacg 427  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  1567 atattttatgcattgtccataccaactgagctaagctcacg 1527  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 430
Target Start/End: Complemental strand, 204634 - 204586
Alignment:
Q  382 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 430  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||    
T  204634 cttacatattttatgcattgttcatgccaactgagctatgctcacgagg 204586  T

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