View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7671_low_19 (Length: 342)

Name: NF7671_low_19
Description: NF7671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7671_low_19
NF7671_low_19
[»] chr1 (15 HSPs)
chr1 (136-331)||(1458065-1458261)
chr1 (22-109)||(44513973-44514060)
chr1 (66-109)||(630813-630856)
chr1 (66-109)||(5832276-5832319)
chr1 (66-109)||(33703537-33703580)
chr1 (66-105)||(8893340-8893379)
chr1 (66-105)||(15698247-15698286)
chr1 (66-105)||(36621399-36621438)
chr1 (62-101)||(45659093-45659132)
chr1 (67-105)||(14717272-14717310)
chr1 (67-105)||(15276479-15276517)
chr1 (71-109)||(21326516-21326554)
chr1 (67-105)||(22344941-22344979)
chr1 (71-109)||(44562782-44562820)
chr1 (69-105)||(6212917-6212953)
[»] chr5 (13 HSPs)
chr5 (18-109)||(41554530-41554621)
chr5 (22-109)||(33486553-33486640)
chr5 (67-109)||(14910693-14910735)
chr5 (18-105)||(34873908-34873995)
chr5 (23-105)||(28500764-28500846)
chr5 (61-109)||(4726951-4726999)
chr5 (66-105)||(15710589-15710628)
chr5 (67-105)||(6887207-6887245)
chr5 (67-109)||(18472753-18472795)
chr5 (67-109)||(28618647-28618688)
chr5 (67-105)||(31645876-31645914)
chr5 (69-107)||(37425041-37425079)
chr5 (67-108)||(34843960-34844001)
[»] chr7 (19 HSPs)
chr7 (22-109)||(28015400-28015487)
chr7 (62-109)||(39090159-39090206)
chr7 (22-109)||(5025040-5025126)
chr7 (22-109)||(38649341-38649428)
chr7 (66-109)||(43483643-43483686)
chr7 (62-105)||(135169-135212)
chr7 (66-109)||(24470438-24470480)
chr7 (66-109)||(24475386-24475428)
chr7 (62-101)||(35141775-35141814)
chr7 (66-105)||(44681508-44681547)
chr7 (66-109)||(47156437-47156480)
chr7 (66-105)||(47749781-47749820)
chr7 (66-109)||(49166970-49167012)
chr7 (67-109)||(8611652-8611693)
chr7 (67-105)||(15124009-15124047)
chr7 (71-109)||(30992856-30992894)
chr7 (67-105)||(40775314-40775352)
chr7 (22-108)||(16263432-16263517)
chr7 (71-107)||(26017691-26017727)
[»] chr4 (17 HSPs)
chr4 (22-109)||(15729965-15730052)
chr4 (22-109)||(46728904-46728991)
chr4 (62-109)||(16991915-16991962)
chr4 (66-109)||(20961494-20961537)
chr4 (66-109)||(29474382-29474425)
chr4 (66-109)||(40859689-40859732)
chr4 (62-109)||(53903653-53903699)
chr4 (67-109)||(30416650-30416692)
chr4 (66-108)||(31601387-31601429)
chr4 (66-107)||(51646138-51646179)
chr4 (66-105)||(2945184-2945223)
chr4 (62-105)||(37869441-37869484)
chr4 (62-108)||(1124986-1125032)
chr4 (67-105)||(4634330-4634368)
chr4 (67-105)||(9661900-9661938)
chr4 (67-105)||(12519703-12519741)
chr4 (71-109)||(23067881-23067919)
[»] chr8 (10 HSPs)
chr8 (22-109)||(16937323-16937410)
chr8 (22-107)||(37659011-37659096)
chr8 (62-105)||(9992712-9992755)
chr8 (66-107)||(13864404-13864445)
chr8 (66-107)||(32256749-32256790)
chr8 (70-109)||(2628956-2628995)
chr8 (66-105)||(9270068-9270107)
chr8 (66-105)||(36545809-36545848)
chr8 (67-105)||(31874131-31874169)
chr8 (71-107)||(41996590-41996626)
[»] chr2 (19 HSPs)
chr2 (28-109)||(15673951-15674032)
chr2 (22-109)||(26491346-26491432)
chr2 (67-109)||(42105781-42105823)
chr2 (66-109)||(6089936-6089979)
chr2 (66-109)||(10589082-10589125)
chr2 (62-107)||(19581026-19581071)
chr2 (66-105)||(19953617-19953656)
chr2 (66-109)||(25516537-25516579)
chr2 (66-109)||(27191364-27191406)
chr2 (66-109)||(27841178-27841220)
chr2 (66-109)||(29734233-29734276)
chr2 (66-105)||(34480003-34480042)
chr2 (66-109)||(38822118-38822161)
chr2 (67-105)||(3390479-3390517)
chr2 (71-109)||(7640389-7640427)
chr2 (67-105)||(25623074-25623112)
chr2 (67-105)||(25771492-25771530)
chr2 (67-105)||(27024168-27024206)
chr2 (61-105)||(41841997-41842041)
[»] scaffold0002 (1 HSPs)
scaffold0002 (125-224)||(448051-448150)
[»] scaffold0340 (1 HSPs)
scaffold0340 (66-109)||(11805-11848)
[»] chr3 (12 HSPs)
chr3 (62-105)||(14741349-14741392)
chr3 (66-109)||(28995334-28995377)
chr3 (66-109)||(913344-913387)
chr3 (66-109)||(40797076-40797119)
chr3 (66-109)||(42106155-42106198)
chr3 (66-105)||(43839546-43839585)
chr3 (66-109)||(50519833-50519875)
chr3 (67-105)||(1165425-1165463)
chr3 (67-109)||(33977951-33977993)
chr3 (67-109)||(36540701-36540743)
chr3 (67-105)||(43029730-43029768)
chr3 (62-99)||(32089954-32089991)
[»] scaffold1294 (1 HSPs)
scaffold1294 (66-105)||(827-866)
[»] scaffold0045 (1 HSPs)
scaffold0045 (66-109)||(9676-9719)
[»] scaffold0024 (1 HSPs)
scaffold0024 (62-105)||(36576-36619)
[»] chr6 (6 HSPs)
chr6 (66-109)||(12576506-12576549)
chr6 (66-105)||(20845055-20845094)
chr6 (67-105)||(13234137-13234175)
chr6 (62-99)||(32457699-32457736)
chr6 (67-107)||(8633218-8633258)
chr6 (73-109)||(19759831-19759867)
[»] scaffold0157 (1 HSPs)
scaffold0157 (67-105)||(1170-1208)


Alignment Details
Target: chr1 (Bit Score: 181; Significance: 9e-98; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 136 - 331
Target Start/End: Original strand, 1458065 - 1458261
Alignment:
Q  136 ctttataaacatgtgtaatagtatttaaggtaccaagtatgtgcaactgtgaattatattggctgaaaatcaattttactactaatcta-ggtacattga 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1458065 ctttataaacatgtgtaatagtatttaaggtaccaagtatgtgcaactgtgaattatattggctgaaaatcaattttactactaatctaaggtacattga 1458164  T
Q  235 tgcaatgaaattaccgtgtgtgatattaagagtgggttaaattgggtattttgtatctgaaatagaatttaagagtgggtttgactgcttcacttca 331  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1458165 tgcaatgaaattaccgagtgtgatattaagagtgggttaaattgggtattttgtatatgaaatagaatttaagagtgggtttgactgcttcacttca 1458261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 44513973 - 44514060
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||| ||||       ||||  |||| ||||||||| ||||||||||||||||||||||||||||    
T  44513973 aaaacaaggtcgcactaagacgacgaattcacaaaaaaagaaacaaaatggatgtgtaaatcacttatttcaataaaagggaaataga 44514060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 630813 - 630856
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  630813 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 630856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 5832319 - 5832276
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  5832319 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 5832276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 33703537 - 33703580
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  33703537 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 33703580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 8893379 - 8893340
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  8893379 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 8893340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 15698286 - 15698247
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  15698286 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 15698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 36621438 - 36621399
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  36621438 gaaatagatgtgaaagtcacttatttcaataaaagagaaa 36621399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 45659132 - 45659093
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagg 101  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  45659132 aaatgaaatagatgtgaaaatcacttatttcaataaaagg 45659093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 14717272 - 14717310
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  14717272 aaatagatgtgaaaatcacttatttcaataaaagggaaa 14717310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 15276479 - 15276517
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  15276479 aaatagatgtgaaaatcacttatttcaataaaagggaaa 15276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Complemental strand, 21326554 - 21326516
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  21326554 agatgtgaaaatcacttatttcaataaaagggaaataga 21326516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 22344941 - 22344979
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  22344941 aaatagatgtgaaaatcacttatttcaataaaagggaaa 22344979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 44562782 - 44562820
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  44562782 agatgtgaaaatcacttatttcaataaaagggaaataga 44562820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 6212917 - 6212953
Alignment:
Q  69 atagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||| || ||||||||||||||||||||||||    
T  6212917 atagatgtgaaaatcacttatttcaataaaagggaaa 6212953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 41554621 - 41554530
Alignment:
Q  18 gaataaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||||||| |||||||| ||||||||       |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  41554621 gaataaaacaaggtcgcactaagacgacgaaatcactacaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaagggaaataga 41554530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 33486553 - 33486640
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  33486553 aaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaagggaaataga 33486640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 14910693 - 14910735
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  14910693 aaatagatgtgaaaatcacttatttcaataaaagggaaataga 14910735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 34873995 - 34873908
Alignment:
Q  18 gaataaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||  ||||| |||||||| ||||||||        | ||||||||||||| ||| ||||||||||||||||||||||||    
T  34873995 gaataaaacaacatcgcattaagacgacgaaatcacgaaagaaaagatgaaatagatgtataactcacttatttcaataaaagggaaa 34873908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 28500846 - 28500764
Alignment:
Q  23 aaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||| | |||| |||||||||||||||||        ||| |||||||||||| || ||||||||||||||||||||||||    
T  28500846 aaacaatgccgcactaagacgaagaaatcacaaaataaaaaacgaaatagatgtgaaaatcacttatttcaataaaagggaaa 28500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 4726951 - 4726999
Alignment:
Q  61 gaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||| || ||||||| || ||||||||||||||||||||||||||||    
T  4726951 gaaatgtaacagatgtgaaaatcacttatttcaataaaagggaaataga 4726999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 15710628 - 15710589
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  15710628 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 15710589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 6887207 - 6887245
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  6887207 aaatagatgtgaaaatcacttatttcaataaaagggaaa 6887245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 18472753 - 18472795
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| ||||||||| |||||||||| |||||||    
T  18472753 aaatagatgtgtaaatcacttattgcaataaaaggaaaataga 18472795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 28618688 - 28618647
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  28618688 aaatagatgtgaaa-tcacttatttcaataaaagggaaataga 28618647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 31645914 - 31645876
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  31645914 aaatagatgtgaaaatcacttatttcaataaaagggaaa 31645876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 37425079 - 37425041
Alignment:
Q  69 atagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  37425079 atagatgtgaaaatcacttatttcaataaaagggaaata 37425041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 34844001 - 34843960
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaatag 108  Q
    ||||||||||| || || ||||||||||||||||||||||||    
T  34844001 aaatagatgtgaaaatcgcttatttcaataaaagggaaatag 34843960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 28015487 - 28015400
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       | || ||||||||||||||| ||||||||||||||||||||||||||||    
T  28015487 aaaacaaggtcgcattaagacgacgaaatcacaaaaaaaggaacgaaatagatgtgtaaatcacttatttcaataaaagggaaataga 28015400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 39090206 - 39090159
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  39090206 aaatgaaatagatgtgaaaatcacttatttcaataaaagggaaataga 39090159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 5025040 - 5025126
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       |||| |||||||| |||||| |||| |||||||||||||||||||||||    
T  5025040 aaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcac-tatttcaataaaagggaaataga 5025126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 38649341 - 38649428
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| || |||||||| || |||||       |||| ||||||||||||||| |||||||||||||||||||| |||||||    
T  38649341 aaaacaaggtctcactaagacgacgagatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttcaataaaaggaaaataga 38649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 43483686 - 43483643
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  43483686 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 43483643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 135169 - 135212
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||||||| || |||| |||||||||||||||||||    
T  135169 aaatgaaatagatgtgaaaatcacctatttcaataaaagggaaa 135212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 24470480 - 24470438
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  24470480 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 24470438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 24475428 - 24475386
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  24475428 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 24475386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 101
Target Start/End: Original strand, 35141775 - 35141814
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagg 101  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  35141775 aaatgaaatagatgtgaaaatcacttatttcaataaaagg 35141814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 44681547 - 44681508
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  44681547 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 44681508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 47156480 - 47156437
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || |||||||||||||||||||| |||||||    
T  47156480 gaaatagatgtgaaaatcacttatttcaataaaaggaaaataga 47156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 47749820 - 47749781
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  47749820 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 47749781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 49167012 - 49166970
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  49167012 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 49166970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 8611652 - 8611693
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  8611652 aaatagatgtgaaa-tcacttatttcaataaaagggaaataga 8611693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 15124009 - 15124047
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  15124009 aaatagatgtgaaaatcacttatttcaataaaagggaaa 15124047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 30992856 - 30992894
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  30992856 agatgtgaaaatcacttatttcaataaaagggaaataga 30992894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 40775352 - 40775314
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  40775352 aaatagatgtgaaaatcacttatttcaataaaagggaaa 40775314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Complemental strand, 16263517 - 16263432
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaatag 108  Q
    |||||||||||||| ||| |||| ||||||||       |||| |||||| ||||||||  |||||||||||||||||| |||||||    
T  16263517 aaaacaaggtcgcactaacacgacgaaatcacaacaaaagaaacgaaata-atgtgtaaaacacttatttcaataaaagagaaatag 16263432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 26017691 - 26017727
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    ||||||| || ||||||||||||||||||||||||||    
T  26017691 agatgtgaaaatcacttatttcaataaaagggaaata 26017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 8e-18; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 15729965 - 15730052
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       |||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  15729965 aaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagaagtgtaaatcacttatttcaataaaagggaaataga 15730052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 46728904 - 46728991
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       |||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  46728904 aaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaagggaaataga 46728991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 16991962 - 16991915
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  16991962 aaatgaaatagatgtgaaaatcacttatttcaataaaagggaaataga 16991915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 20961537 - 20961494
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  20961537 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 20961494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 29474382 - 29474425
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  29474382 gaaatagatatgtaaatcacttatttcaataaaagggaaataga 29474425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 40859732 - 40859689
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  40859732 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 40859689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 53903699 - 53903653
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  53903699 aaatgaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 53903653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 30416650 - 30416692
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  30416650 aaatagatgtgaaaatcacttatttcaataaaagggaaataga 30416692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 31601387 - 31601429
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaatag 108  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  31601387 gaaatagatgtgaaaatcacttatttcaataaaagggaaatag 31601429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 51646179 - 51646138
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  51646179 gaaatagatgtgaaaatcacttatttcaataaaagggaaata 51646138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 2945223 - 2945184
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  2945223 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 2945184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 37869441 - 37869484
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  37869441 aaataaaatagatgtgaaaatcacttatttcaataaaagggaaa 37869484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 1125032 - 1124986
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaatag 108  Q
    |||||||||||||||| || |||||||||||||||||  ||||||||    
T  1125032 aaatgaaatagatgtgaaaatcacttatttcaataaataggaaatag 1124986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 4634368 - 4634330
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  4634368 aaatagatgtgaaaatcacttatttcaataaaagggaaa 4634330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 9661938 - 9661900
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  9661938 aaatagatgtgaaaatcacttatttcaataaaagggaaa 9661900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 12519741 - 12519703
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  12519741 aaatagatgtgaaaatcacttatttcaataaaagggaaa 12519703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 23067881 - 23067919
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  23067881 agatgtgaaaatcacttatttcaataaaagggaaataga 23067919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 16937323 - 16937410
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||||| |||||||| ||||||||       |||| ||||||||||||||| |||||||||| | |||||||||||||||    
T  16937323 aaaacaaggtcgcactaagacgacgaaatcacaaaaaaagaaacgaaatagatgtgtaaatcacttatttaagtaaaagggaaataga 16937410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 37659096 - 37659011
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    |||||||||||||| |||||| | ||||||||       |||| |||||||| |||||| ||||||||||||||||||||||||||    
T  37659096 aaaacaaggtcgcactaagacaacgaaatcacaaaaaaagaaacgaaatagacgtgtaaatcacttatttcaataaaagggaaata 37659011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 9992755 - 9992712
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  9992755 aaatgaaatagatgtgaaaatcacttatttcaataaaagggaaa 9992712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 13864445 - 13864404
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  13864445 gaaatagatgtgaaaatcacttatttcaataaaagggaaata 13864404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 32256749 - 32256790
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  32256749 gaaatagatgtgaaaatcacttatttcaataaaagggaaata 32256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 109
Target Start/End: Complemental strand, 2628995 - 2628956
Alignment:
Q  70 tagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  2628995 tagatgtgaaaatcacttatttcaataaaagggaaataga 2628956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 9270107 - 9270068
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  9270107 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 9270068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 36545809 - 36545848
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  36545809 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 36545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 31874169 - 31874131
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  31874169 aaatagatgtgaaaatcacttatttcaataaaagggaaa 31874131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 41996626 - 41996590
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    ||||||| || ||||||||||||||||||||||||||    
T  41996626 agatgtgaaaatcacttatttcaataaaagggaaata 41996590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 15673951 - 15674032
Alignment:
Q  28 aggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||| |||||||| ||||||||       |||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  15673951 aggtcgcactaagacgatgaaatcacaaaaaaagaaacgaaatagatgggtaaatcacttatttcaataaaagggaaataga 15674032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 26491432 - 26491346
Alignment:
Q  22 aaaacaaggtcgcaataagacgaagaaatcacnnnnnnngaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| |||||| |||||||| ||||||||        |||||||||||||||| || ||||||||||||||||||||||||||||    
T  26491432 aaaacaacgtcgcactaagacgacgaaatcacgaaagaaaaaatgaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 26491346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 42105781 - 42105823
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  42105781 aaatagatgtgaaagtcacttatttcaataaaagggaaataga 42105823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 6089979 - 6089936
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  6089979 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 6089936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 10589125 - 10589082
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  10589125 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 10589082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 19581026 - 19581071
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    ||||||||||||| || || ||||||||||||||||||||||||||    
T  19581026 aaatgaaatagatatgaaaatcacttatttcaataaaagggaaata 19581071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 19953656 - 19953617
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  19953656 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 19953617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 25516579 - 25516537
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  25516579 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 25516537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 27191364 - 27191406
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  27191364 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 27191406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 27841178 - 27841220
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  27841178 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 27841220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 29734276 - 29734233
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| |||| || ||||||||||||||||||||||||||||    
T  29734276 gaaataggtgtgaaaatcacttatttcaataaaagggaaataga 29734233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 34480042 - 34480003
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  34480042 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 34480003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 38822161 - 38822118
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||| ||||||||||||||    
T  38822161 gaaatagatgtgaaaatcacttatttcaacaaaagggaaataga 38822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 3390517 - 3390479
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  3390517 aaatagatgtgaaaatcacttatttcaataaaagggaaa 3390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 7640389 - 7640427
Alignment:
Q  71 agatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  7640389 agatgtgaaaatcacttatttcaataaaagggaaataga 7640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 25623074 - 25623112
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  25623074 aaatagatgtgaaaatcacttatttcaataaaagggaaa 25623112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 25771530 - 25771492
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  25771530 aaatagatgtgaaaatcacttatttcaataaaagggaaa 25771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 27024168 - 27024206
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  27024168 aaatagatgtgaaaatcacttatttcaataaaagggaaa 27024206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 41842041 - 41841997
Alignment:
Q  61 gaaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||| |||||||||||| || || |||||||||||||||||||||    
T  41842041 gaaacgaaatagatgtgaaaatcgcttatttcaataaaagggaaa 41841997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 448051 - 448150
Alignment:
Q  125 gattaatatgactttataaacatgtgtaatagtatttaaggtaccaa-gtatgtgcaactgtgaattatattggctgaaaatcaattttactactaatct 223  Q
    ||||| |||||||||| |||  ||||||||||||  || |||||||| |||||| ||| | |||| ||||||||| | ||||||||||||||||||||||    
T  448051 gattagtatgactttacaaatgtgtgtaatagtaccta-ggtaccaaagtatgtacaattctgaactatattggcgggaaatcaattttactactaatct 448149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 11805 - 11848
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  11805 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 11848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 14741349 - 14741392
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  14741349 aaatgaaatagatgtgaaaatcacttatttcaataaaagggaaa 14741392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 28995334 - 28995377
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  28995334 gaaatagatgtgaaaatcacttatttcaataaaagggaaataga 28995377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 913344 - 913387
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||| ||||||||||||||    
T  913344 gaaatagatgtgaaaatcacttatttcaaaaaaagggaaataga 913387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 40797119 - 40797076
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||| ||||||||||||||||||||||||    
T  40797119 gaaatagatgtgaaaatcatttatttcaataaaagggaaataga 40797076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 42106198 - 42106155
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||| ||||| || ||||||||||||||||||||||||||||    
T  42106198 gaaatatatgtgaaaatcacttatttcaataaaagggaaataga 42106155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 43839546 - 43839585
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  43839546 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 43839585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 50519875 - 50519833
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||||||||||||||||||||||||    
T  50519875 gaaatagatgtgaaa-tcacttatttcaataaaagggaaataga 50519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 1165425 - 1165463
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  1165425 aaatagatgtgaaaatcacttatttcaataaaagggaaa 1165463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 33977951 - 33977993
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||||||||  || ||||||||||||||||||||||||||||    
T  33977951 aaatagatgtaaaaatcacttatttcaataaaagggaaataga 33977993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Original strand, 36540701 - 36540743
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||| ||||| || ||||||||||||||||||||||||||||    
T  36540701 aaataaatgtgaaaatcacttatttcaataaaagggaaataga 36540743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 43029768 - 43029730
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  43029768 aaatagatgtgaaaatcacttatttcaataaaagggaaa 43029730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 32089954 - 32089991
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaa 99  Q
    |||||||||||||||| || ||||||||||||||||||    
T  32089954 aaatgaaatagatgtgaaaatcacttatttcaataaaa 32089991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 866 - 827
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  866 gaaatagatgtgaaagccacttatttcaataaaagggaaa 827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 9676 - 9719
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || ||||||| ||||||||||||||||||||    
T  9676 gaaatagatgtgaaaatcacttaattcaataaaagggaaataga 9719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 36619 - 36576
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||| ||||||||||| || ||||||||||||||||||||||||    
T  36619 aaataaaatagatgtgaaaatcacttatttcaataaaagggaaa 36576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 12576506 - 12576549
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    |||||||||||| || |||||||||||||| |||||||||||||    
T  12576506 gaaatagatgtgaaaatcacttatttcaattaaagggaaataga 12576549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 20845094 - 20845055
Alignment:
Q  66 gaaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  20845094 gaaatagatgtgaaaatcacttatttcaataaaagggaaa 20845055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 13234137 - 13234175
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  13234137 aaatagatgtgaaaatcacttatttcaataaaagggaaa 13234175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 32457736 - 32457699
Alignment:
Q  62 aaatgaaatagatgtgtaagtcacttatttcaataaaa 99  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  32457736 aaatgaaatacatgtgaaagtcacttatttcaataaaa 32457699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 8633218 - 8633258
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaata 107  Q
    ||||||||||| || |||||||||||||||||||| |||||    
T  8633218 aaatagatgtgaaaatcacttatttcaataaaaggaaaata 8633258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 109
Target Start/End: Complemental strand, 19759867 - 19759831
Alignment:
Q  73 atgtgtaagtcacttatttcaataaaagggaaataga 109  Q
    ||||| || ||||||||||||||||||||||||||||    
T  19759867 atgtgaaaatcacttatttcaataaaagggaaataga 19759831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 1170 - 1208
Alignment:
Q  67 aaatagatgtgtaagtcacttatttcaataaaagggaaa 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  1170 aaatagatgtgaaaatcacttatttcaataaaagggaaa 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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